GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Rxra Links NCBI RGD Ensembl	ENSRNOG00000009446	retinoid X receptor alpha

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Rxra	rn6_v1_chr3_+_6211789_6211789	-0.39	9.4e-13	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_+_113318563 Show fit	42.02	ENSRNOT00000089230	Ckmt1 Links NCBI RGD Ensembl Show fit	creatine kinase, mitochondrial 1
chr9_-_92530938 Show fit	28.10	ENSRNOT00000064875	Slc16a14 Links NCBI RGD Ensembl Show fit	solute carrier family 16, member 14
chr2_-_225107283 Show fit	27.95	ENSRNOT00000055711	Slc44a3 Links NCBI RGD Ensembl Show fit	solute carrier family 44, member 3
chr17_+_23661429 Show fit	26.49	ENSRNOT00000046523	Phactr1 Links NCBI RGD Ensembl Show fit	phosphatase and actin regulator 1
chr4_-_176294997 Show fit	24.58	ENSRNOT00000015112 ENSRNOT00000051461 ENSRNOT00000000026 ENSRNOT00000039877 ENSRNOT00000049303	Slc21a4 Links NCBI RGD Ensembl Show fit	kidney specific organic anion transporter
chr10_-_65692016 Show fit	24.33	ENSRNOT00000085074 ENSRNOT00000038690	Slc13a2 Links NCBI RGD Ensembl Show fit	solute carrier family 13 member 2
chr18_-_1946840 Show fit	23.20	ENSRNOT00000041878	Abhd3 Links NCBI RGD Ensembl Show fit	abhydrolase domain containing 3
chr1_-_31122093 Show fit	23.13	ENSRNOT00000016712	NEWGENE_1307525 Links NCBI RGD Ensembl Show fit	SOGA family member 3
chrX_+_14019961 Show fit	22.93	ENSRNOT00000004785	Sytl5 Links NCBI RGD Ensembl Show fit	synaptotagmin-like 5
chr7_+_139685573 Show fit	22.92	ENSRNOT00000088376	Pfkm Links NCBI RGD Ensembl Show fit	phosphofructokinase, muscle
chr9_-_71852113 Show fit	22.90	ENSRNOT00000083263 ENSRNOT00000072983	AABR07067896.1 Links NCBI RGD Ensembl Show fit
chr3_-_45210474 Show fit	22.77	ENSRNOT00000091777	Ccdc148 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 148
chr4_+_29978739 Show fit	21.46	ENSRNOT00000011756	Ppp1r9a Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 9A
chr13_-_80703615 Show fit	20.27	ENSRNOT00000004599	Fmo4 Links NCBI RGD Ensembl Show fit	flavin containing monooxygenase 4
chr16_-_32868680 Show fit	20.00	ENSRNOT00000015974 ENSRNOT00000082392	Aadat Links NCBI RGD Ensembl Show fit	aminoadipate aminotransferase
chr4_-_17594598 Show fit	19.93	ENSRNOT00000008936	Sema3e Links NCBI RGD Ensembl Show fit	semaphorin 3E
chr3_-_52447622 Show fit	18.57	ENSRNOT00000083552	Scn1a Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel alpha subunit 1
chr4_+_88832178 Show fit	17.55	ENSRNOT00000088983	Abcg2 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily G (WHITE), member 2
chr8_-_14880644 Show fit	17.08	ENSRNOT00000015977	Fat3 Links NCBI RGD Ensembl Show fit	FAT atypical cadherin 3
chr7_-_82687130 Show fit	16.88	ENSRNOT00000006791	Tmem74 Links NCBI RGD Ensembl Show fit	transmembrane protein 74
chr7_-_136853957 Show fit	16.36	ENSRNOT00000008985	Nell2 Links NCBI RGD Ensembl Show fit	neural EGFL like 2
chr15_+_5306459 Show fit	15.98	ENSRNOT00000092079	LOC108348081 Links NCBI RGD Ensembl Show fit	CD99 antigen-like protein 2
chr7_+_140788987 Show fit	15.59	ENSRNOT00000086611	Kcnh3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily H member 3
chr9_-_69953182 Show fit	15.40	ENSRNOT00000015852	Ndufs1 Links NCBI RGD Ensembl Show fit	NADH dehydrogenase (ubiquinone) Fe-S protein 1
chr9_-_83253458 Show fit	15.04	ENSRNOT00000041689	Epha4 Links NCBI RGD Ensembl Show fit	Eph receptor A4
chr7_+_11356118 Show fit	14.86	ENSRNOT00000041325	Atcay Links NCBI RGD Ensembl Show fit	ATCAY, caytaxin
chr19_-_49510901 Show fit	14.54	ENSRNOT00000082929 ENSRNOT00000079969	LOC687399 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC687399
chr19_+_22450030 Show fit	13.62	ENSRNOT00000021739	Neto2 Links NCBI RGD Ensembl Show fit	neuropilin and tolloid like 2
chr14_-_10395047 Show fit	13.48	ENSRNOT00000002936	Gpat3 Links NCBI RGD Ensembl Show fit	glycerol-3-phosphate acyltransferase 3
chr18_+_45023932 Show fit	13.22	ENSRNOT00000039379	Fam170a Links NCBI RGD Ensembl Show fit	family with sequence similarity 170, member A
chr1_+_213676954 Show fit	13.07	ENSRNOT00000050551	Nlrp6 Links NCBI RGD Ensembl Show fit	NLR family, pyrin domain containing 6
chrX_+_57866709 Show fit	13.07	ENSRNOT00000040923	Ppp4r3c Links NCBI RGD Ensembl Show fit	protein phosphatase 4 regulatory subunit 3C
chr10_-_47997796 Show fit	13.05	ENSRNOT00000078422	Slc5a10 Links NCBI RGD Ensembl Show fit	solute carrier family 5 member 10
chr15_+_675085 Show fit	12.99	ENSRNOT00000091318	Kcnma1 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily M alpha 1
chr1_+_15620653 Show fit	12.46	ENSRNOT00000017401	Map7 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 7
chrX_+_20351486 Show fit	12.33	ENSRNOT00000093675 ENSRNOT00000047444	Wnk3 Links NCBI RGD Ensembl Show fit	WNK lysine deficient protein kinase 3
chr4_+_5644260 Show fit	11.92	ENSRNOT00000041876	Actr3b Links NCBI RGD Ensembl Show fit	ARP3 actin related protein 3 homolog B
chr1_+_53531947 Show fit	11.84	ENSRNOT00000077340	Tcp10b Links NCBI RGD Ensembl Show fit	t-complex protein 10b
chr2_-_199971965 Show fit	11.63	ENSRNOT00000087026	Pde4dip Links NCBI RGD Ensembl Show fit	phosphodiesterase 4D interacting protein
chr16_+_74810938 Show fit	11.59	ENSRNOT00000058091	Nek5 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 5
chr7_+_120140460 Show fit	11.57	ENSRNOT00000040513 ENSRNOT00000073905	Pdxp Links NCBI RGD Ensembl Show fit	pyridoxal phosphatase
chr15_-_45376476 Show fit	11.27	ENSRNOT00000065838	Dleu7 Links NCBI RGD Ensembl Show fit	deleted in lymphocytic leukemia, 7
chr1_-_169344306 Show fit	11.13	ENSRNOT00000022852	Ubqlnl Links NCBI RGD Ensembl Show fit	ubiquilin-like
chr11_+_61531571 Show fit	10.95	ENSRNOT00000093467 ENSRNOT00000002727	Atp6v1a Links NCBI RGD Ensembl Show fit	ATPase H+ transporting V1 subunit A
chr1_+_97712177 Show fit	10.60	ENSRNOT00000027745	MGC114499 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4930433I11 gene
chr3_+_69549673 Show fit	10.58	ENSRNOT00000043974	Zfp804a Links NCBI RGD Ensembl Show fit	zinc finger protein 804A
chrX_-_1704033 Show fit	10.58	ENSRNOT00000051956	Usp11 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 11
chr1_-_250727079 Show fit	10.56	ENSRNOT00000079942 ENSRNOT00000087588	Sgms1 Links NCBI RGD Ensembl Show fit	sphingomyelin synthase 1
chr4_+_114876770 Show fit	10.52	ENSRNOT00000068102 ENSRNOT00000078175	Dctn1 Links NCBI RGD Ensembl Show fit	dynactin subunit 1
chr16_-_10726648 Show fit	10.26	ENSRNOT00000080635 ENSRNOT00000087150	Sncg Links NCBI RGD Ensembl Show fit	synuclein, gamma
chr8_+_123126667 Show fit	10.20	ENSRNOT00000015643	Osbpl10 Links NCBI RGD Ensembl Show fit	oxysterol binding protein-like 10
chr19_+_58505811 Show fit	10.19	ENSRNOT00000031717	Map10 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 10
chr13_+_71110064 Show fit	10.12	ENSRNOT00000088329	Rgs8 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 8
chr5_-_171710312 Show fit	10.08	ENSRNOT00000076044 ENSRNOT00000071280 ENSRNOT00000072059 ENSRNOT00000077015	Prdm16 Links NCBI RGD Ensembl Show fit	PR/SET domain 16
chr12_-_18526250 Show fit	9.97	ENSRNOT00000001791	Asmt Links NCBI RGD Ensembl Show fit	acetylserotonin O-methyltransferase
chr9_-_65790347 Show fit	9.79	ENSRNOT00000028506	AABR07067812.1 Links NCBI RGD Ensembl Show fit
chr2_-_192780631 Show fit	9.70	ENSRNOT00000012371	Smcp Links NCBI RGD Ensembl Show fit	sperm mitochondria-associated cysteine-rich protein
chrX_-_77295426 Show fit	9.55	ENSRNOT00000090833	Taf9b Links NCBI RGD Ensembl Show fit	TATA-box binding protein associated factor 9b
chr16_+_49462889 Show fit	9.51	ENSRNOT00000039909	Ankrd37 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 37
chrX_+_15035569 Show fit	9.26	ENSRNOT00000006491 ENSRNOT00000078392	Porcn Links NCBI RGD Ensembl Show fit	porcupine homolog (Drosophila)
chr11_+_54137639 Show fit	9.24	ENSRNOT00000066343	LOC100909977 Links NCBI RGD Ensembl Show fit	leukocyte surface antigen CD47-like
chr10_-_18443934 Show fit	9.11	ENSRNOT00000059895 ENSRNOT00000080021	Ranbp17 Links NCBI RGD Ensembl Show fit	RAN binding protein 17
chr1_-_222178725 Show fit	9.00	ENSRNOT00000028697	Esrra Links NCBI RGD Ensembl Show fit	estrogen related receptor, alpha
chr4_+_114854458 Show fit	9.00	ENSRNOT00000013312	LOC500227 Links NCBI RGD Ensembl Show fit	hypothetical gene supported by BC079424
chr1_+_187149453 Show fit	8.98	ENSRNOT00000082738	Xylt1 Links NCBI RGD Ensembl Show fit	xylosyltransferase 1
chr5_+_120250616 Show fit	8.92	ENSRNOT00000070967	Ak4 Links NCBI RGD Ensembl Show fit	adenylate kinase 4
chr1_-_227392054 Show fit	8.84	ENSRNOT00000054806	Ms4a13-ps1 Links NCBI RGD Ensembl Show fit	membrane-spanning 4-domains, subfamily A, member 13, pseudogene 1
chr14_+_85871597 Show fit	8.55	ENSRNOT00000079671	Ankrd36 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 36
chr1_-_99985422 Show fit	8.55	ENSRNOT00000025701	Klk1c2 Links NCBI RGD Ensembl Show fit	kallikrein 1-related peptidase C2
chr11_+_42858478 Show fit	8.53	ENSRNOT00000002293	Arl6 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor like GTPase 6
chr17_+_76306585 Show fit	8.52	ENSRNOT00000065978	Dhtkd1 Links NCBI RGD Ensembl Show fit	dehydrogenase E1 and transketolase domain containing 1
chr3_-_161272460 Show fit	8.49	ENSRNOT00000020740	Acot8 Links NCBI RGD Ensembl Show fit	acyl-CoA thioesterase 8
chr3_-_160922341 Show fit	8.42	ENSRNOT00000029206	Tp53tg5 Links NCBI RGD Ensembl Show fit	TP53 target 5
chrY_+_914045 Show fit	8.41	ENSRNOT00000088593	Eif2s3y Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
chr10_+_28449335 Show fit	8.38	ENSRNOT00000029118	Atp10b Links NCBI RGD Ensembl Show fit	ATPase phospholipid transporting 10B (putative)
chr15_-_25505691 Show fit	8.23	ENSRNOT00000074488	LOC100911492 Links NCBI RGD Ensembl Show fit	homeobox protein OTX2-like
chr10_+_46216884 Show fit	8.18	ENSRNOT00000004448	Nt5m Links NCBI RGD Ensembl Show fit	5',3'-nucleotidase, mitochondrial
chr1_+_79982639 Show fit	8.13	ENSRNOT00000071916	Dmwd Links NCBI RGD Ensembl Show fit	dystrophia myotonica, WD repeat containing
chr3_+_56056925 Show fit	8.10	ENSRNOT00000088351 ENSRNOT00000010508	Klhl23 Links NCBI RGD Ensembl Show fit	kelch-like family member 23
chr15_+_42960307 Show fit	7.86	ENSRNOT00000012528	Trim35 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 35
chrX_+_57866406 Show fit	7.72	ENSRNOT00000076221	Ppp4r3c Links NCBI RGD Ensembl Show fit	protein phosphatase 4 regulatory subunit 3C
chr11_-_70211701 Show fit	7.71	ENSRNOT00000076114	Muc13 Links NCBI RGD Ensembl Show fit	mucin 13, cell surface associated
chr9_+_4807717 Show fit	7.70	ENSRNOT00000092159	LOC100910526 Links NCBI RGD Ensembl Show fit	sulfotransferase 1C2-like
chr16_-_10296341 Show fit	7.62	ENSRNOT00000083990	Zfp488 Links NCBI RGD Ensembl Show fit	zinc finger protein 488
chr10_+_11146359 Show fit	7.61	ENSRNOT00000006314	Pam16 Links NCBI RGD Ensembl Show fit	presequence translocase associated motor 16 homolog
chr4_+_146455332 Show fit	7.59	ENSRNOT00000009775	Hrh1 Links NCBI RGD Ensembl Show fit	histamine receptor H 1
chr10_+_55169282 Show fit	7.45	ENSRNOT00000005423	Ccdc42 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 42
chr9_-_13311924 Show fit	7.43	ENSRNOT00000015584	Kif6 Links NCBI RGD Ensembl Show fit	kinesin family member 6
chr7_-_12519154 Show fit	7.26	ENSRNOT00000093376 ENSRNOT00000077681	Gpx4 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 4
chr2_-_90568486 Show fit	7.25	ENSRNOT00000059380	LOC100910852 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100910852
chr14_-_78377825 Show fit	7.09	ENSRNOT00000068104	AABR07015812.1 Links NCBI RGD Ensembl Show fit
chr2_-_89498395 Show fit	6.98	ENSRNOT00000068507	AABR07009224.1 Links NCBI RGD Ensembl Show fit
chr6_+_43001948 Show fit	6.94	ENSRNOT00000007374	Hpcal1 Links NCBI RGD Ensembl Show fit	hippocalcin-like 1
chr13_-_85622314 Show fit	6.91	ENSRNOT00000005719	Mgst3 Links NCBI RGD Ensembl Show fit	microsomal glutathione S-transferase 3
chr2_-_111793326 Show fit	6.82	ENSRNOT00000092660	Nlgn1 Links NCBI RGD Ensembl Show fit	neuroligin 1
chr16_-_70998575 Show fit	6.82	ENSRNOT00000019935	Kcnu1 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily U member 1
chr8_-_115274165 Show fit	6.78	ENSRNOT00000056386	LOC102550160 Links NCBI RGD Ensembl Show fit	IQ domain-containing protein F5-like
chr8_+_19994668 Show fit	6.72	ENSRNOT00000050608	Olr1160 Links NCBI RGD Ensembl Show fit	olfactory receptor 1160
chr2_+_40554146 Show fit	6.67	ENSRNOT00000015138	Pde4d Links NCBI RGD Ensembl Show fit	phosphodiesterase 4D
chr5_+_57947716 Show fit	6.52	ENSRNOT00000067657	Dnai1 Links NCBI RGD Ensembl Show fit	dynein, axonemal, intermediate chain 1
chr12_-_6078411 Show fit	6.30	ENSRNOT00000001197	Rxfp2 Links NCBI RGD Ensembl Show fit	relaxin/insulin-like family peptide receptor 2
chr4_+_168396775 Show fit	6.25	ENSRNOT00000008645	Borcs5 Links NCBI RGD Ensembl Show fit	BLOC-1 related complex subunit 5
chr9_-_81565416 Show fit	6.24	ENSRNOT00000083582	Aamp Links NCBI RGD Ensembl Show fit	angio-associated, migratory cell protein
chr3_+_72990358 Show fit	6.20	ENSRNOT00000091920	Olr444 Links NCBI RGD Ensembl Show fit	olfactory receptor 444
chr14_+_22597103 Show fit	6.16	ENSRNOT00000048482	Ugt2a1 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase 2 family, polypeptide A1
chr9_-_14906410 Show fit	6.14	ENSRNOT00000061674	LOC680955 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC680955
chr13_-_90589466 Show fit	6.11	ENSRNOT00000070812	Pea15 Links NCBI RGD Ensembl Show fit	phosphoprotein enriched in astrocytes 15
chr6_-_76535517 Show fit	6.11	ENSRNOT00000083857	Ralgapa1 Links NCBI RGD Ensembl Show fit	Ral GTPase activating protein catalytic alpha subunit 1
chr10_-_14299167 Show fit	6.11	ENSRNOT00000042066	Mapk8ip3 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase 8 interacting protein 3
chr15_-_9086282 Show fit	6.04	ENSRNOT00000008989	Thrb Links NCBI RGD Ensembl Show fit	thyroid hormone receptor beta
chr1_+_190072420 Show fit	5.98	ENSRNOT00000037026	Abca15 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily A (ABC1), member 15
chr4_-_100783750 Show fit	5.82	ENSRNOT00000078956	Kcmf1 Links NCBI RGD Ensembl Show fit	potassium channel modulatory factor 1
chr6_+_129538982 Show fit	5.81	ENSRNOT00000083626 ENSRNOT00000082522	Ak7 Links NCBI RGD Ensembl Show fit	adenylate kinase 7
chr5_+_129257429 Show fit	5.80	ENSRNOT00000072396	Ttc39a Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 39A
chr3_-_103745236 Show fit	5.68	ENSRNOT00000006876	Nutm1 Links NCBI RGD Ensembl Show fit	NUT midline carcinoma, family member 1
chr11_-_64968437 Show fit	5.67	ENSRNOT00000059541	Cox17 Links NCBI RGD Ensembl Show fit	COX17 cytochrome c oxidase copper chaperone
chr3_+_75906945 Show fit	5.63	ENSRNOT00000047110	Olr586 Links NCBI RGD Ensembl Show fit	olfactory receptor 586
chr16_+_12174370 Show fit	5.60	ENSRNOT00000072045	LOC102553538 Links NCBI RGD Ensembl Show fit	ral guanine nucleotide dissociation stimulator-like
chr7_-_139394166 Show fit	5.58	ENSRNOT00000082429	Vdr Links NCBI RGD Ensembl Show fit	vitamin D (1,25- dihydroxyvitamin D3) receptor
chr14_-_92495894 Show fit	5.56	ENSRNOT00000064483	Cobl Links NCBI RGD Ensembl Show fit	cordon-bleu WH2 repeat protein
chr1_-_204805738 Show fit	5.55	ENSRNOT00000086830	Fam53b Links NCBI RGD Ensembl Show fit	family with sequence similarity 53, member B
chr14_+_11988671 Show fit	5.53	ENSRNOT00000003207	Rasgef1b Links NCBI RGD Ensembl Show fit	RasGEF domain family, member 1B
chr17_+_78817529 Show fit	5.52	ENSRNOT00000021918	Meig1 Links NCBI RGD Ensembl Show fit	meiosis/spermiogenesis associated 1
chr1_-_227359809 Show fit	5.32	ENSRNOT00000088080	1700025F22Rik Links NCBI RGD Ensembl Show fit	RIKEN cDNA 1700025F22 gene
chr3_+_138770574 Show fit	5.31	ENSRNOT00000012510 ENSRNOT00000066986	Dtd1 Links NCBI RGD Ensembl Show fit	D-tyrosyl-tRNA deacylase 1
chr6_-_142418779 Show fit	5.25	ENSRNOT00000072280 ENSRNOT00000065808	AABR07065814.1 Links NCBI RGD Ensembl Show fit
chr4_-_140503412 Show fit	5.21	ENSRNOT00000079266	AABR07061707.1 Links NCBI RGD Ensembl Show fit
chr3_+_67870111 Show fit	5.17	ENSRNOT00000012628	Nup35 Links NCBI RGD Ensembl Show fit	nucleoporin 35
chr3_+_161272385 Show fit	5.12	ENSRNOT00000021052	Zswim3 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 3
chr12_-_18303041 Show fit	5.07	ENSRNOT00000032844	LOC288521 Links NCBI RGD Ensembl Show fit	similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (CD43) (W3/13 antigen)
chr6_+_44230985 Show fit	5.03	ENSRNOT00000005858	Kidins220 Links NCBI RGD Ensembl Show fit	kinase D-interacting substrate 220
chr1_-_99964824 Show fit	5.03	ENSRNOT00000046377	Klk1c6 Links NCBI RGD Ensembl Show fit	kallikrein 1-related peptidase C6
chr16_-_12194118 Show fit	5.00	ENSRNOT00000071517	RGD1559804 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein 4930474N05
chrX_-_65335987 Show fit	5.00	ENSRNOT00000047128	AABR07038981.1 Links NCBI RGD Ensembl Show fit
chr5_-_156734541 Show fit	4.93	ENSRNOT00000021036	LOC100909857 Links NCBI RGD Ensembl Show fit	cytidine deaminase-like
chr1_-_219144610 Show fit	4.92	ENSRNOT00000023526	Ndufs8 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase core subunit S8
chr11_-_1437732 Show fit	4.86	ENSRNOT00000037345	Csnka2ip Links NCBI RGD Ensembl Show fit	casein kinase 2, alpha prime interacting protein
chr4_+_87608301 Show fit	4.77	ENSRNOT00000058702	Vom1r71 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 71
chr12_-_31629881 Show fit	4.69	ENSRNOT00000001238	Piwil1 Links NCBI RGD Ensembl Show fit	piwi-like RNA-mediated gene silencing 1
chr1_-_221251329 Show fit	4.61	ENSRNOT00000031678	Tigd3 Links NCBI RGD Ensembl Show fit	tigger transposable element derived 3
chr18_+_59096643 Show fit	4.60	ENSRNOT00000025325	Wdr7 Links NCBI RGD Ensembl Show fit	WD repeat domain 7
chr9_-_43276685 Show fit	4.56	ENSRNOT00000022779	Actr1b Links NCBI RGD Ensembl Show fit	ARP1 actin-related protein 1 homolog B, centractin beta
chr17_-_32158538 Show fit	4.52	ENSRNOT00000024141	Nqo2 Links NCBI RGD Ensembl Show fit	NAD(P)H quinone dehydrogenase 2
chr13_+_83721300 Show fit	4.47	ENSRNOT00000082677	Adcy10 Links NCBI RGD Ensembl Show fit	adenylate cyclase 10 (soluble)
chr5_-_102743417 Show fit	4.46	ENSRNOT00000067389	Bnc2 Links NCBI RGD Ensembl Show fit	basonuclin 2
chr17_+_5281727 Show fit	4.44	ENSRNOT00000024781	Isca1 Links NCBI RGD Ensembl Show fit	iron-sulfur cluster assembly 1
chr3_+_70327193 Show fit	4.43	ENSRNOT00000089165	Fsip2 Links NCBI RGD Ensembl Show fit	fibrous sheath-interacting protein 2
chr1_+_229066045 Show fit	4.40	ENSRNOT00000016454	Glyat Links NCBI RGD Ensembl Show fit	glycine-N-acyltransferase
chr2_-_80667481 Show fit	4.37	ENSRNOT00000016784	Trio Links NCBI RGD Ensembl Show fit	trio Rho guanine nucleotide exchange factor
chr10_+_3227160 Show fit	4.34	ENSRNOT00000088075	Ntan1 Links NCBI RGD Ensembl Show fit	N-terminal asparagine amidase
chr13_-_47440682 Show fit	4.23	ENSRNOT00000037679 ENSRNOT00000005729 ENSRNOT00000050354 ENSRNOT00000050859	Pfkfb2 Links NCBI RGD Ensembl Show fit	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
chr3_+_168345152 Show fit	4.19	ENSRNOT00000017654	Dok5 Links NCBI RGD Ensembl Show fit	docking protein 5
chr9_+_45901741 Show fit	4.11	ENSRNOT00000059571	Npas2 Links NCBI RGD Ensembl Show fit	neuronal PAS domain protein 2
chr6_+_8669722 Show fit	4.06	ENSRNOT00000048550	Camkmt Links NCBI RGD Ensembl Show fit	calmodulin-lysine N-methyltransferase
chr20_+_18833481 Show fit	4.05	ENSRNOT00000080846	Bicc1 Links NCBI RGD Ensembl Show fit	BicC family RNA binding protein 1
chr18_+_68983545 Show fit	4.04	ENSRNOT00000085317	Stard6 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 6
chr3_+_141068023 Show fit	4.04	ENSRNOT00000036527	Kiz Links NCBI RGD Ensembl Show fit	kizuna centrosomal protein
chr8_+_117246376 Show fit	4.02	ENSRNOT00000074493	Ccdc71 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 71
chr8_-_83693472 Show fit	3.97	ENSRNOT00000015947	Fam83b Links NCBI RGD Ensembl Show fit	family with sequence similarity 83, member B
chr15_+_39945095 Show fit	3.91	ENSRNOT00000016826	Shisa2 Links NCBI RGD Ensembl Show fit	shisa family member 2
chr10_+_91830654 Show fit	3.84	ENSRNOT00000005176	Wnt3 Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 3
chr1_+_86914137 Show fit	3.84	ENSRNOT00000027006	Fbxo17 Links NCBI RGD Ensembl Show fit	F-box protein 17
chr1_+_171592797 Show fit	3.74	ENSRNOT00000026607	Syt9 Links NCBI RGD Ensembl Show fit	synaptotagmin 9
chr1_-_169598835 Show fit	3.74	ENSRNOT00000072996	Olr156 Links NCBI RGD Ensembl Show fit	olfactory receptor 156
chr1_-_215310013 Show fit	3.73	ENSRNOT00000054858	AABR07006049.2 Links NCBI RGD Ensembl Show fit
chr6_+_78567970 Show fit	3.72	ENSRNOT00000032743	Ttc6 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 6
chr7_-_62162453 Show fit	3.71	ENSRNOT00000010720	Cand1 Links NCBI RGD Ensembl Show fit	cullin-associated and neddylation-dissociated 1
chr16_-_12538117 Show fit	3.67	ENSRNOT00000046081	AABR07024718.1 Links NCBI RGD Ensembl Show fit
chr7_-_144960527 Show fit	3.65	ENSRNOT00000086554	Zfp385a Links NCBI RGD Ensembl Show fit	zinc finger protein 385A
chr1_+_220243473 Show fit	3.62	ENSRNOT00000084650 ENSRNOT00000027091	mrpl11 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L11
chr19_+_24456976 Show fit	3.52	ENSRNOT00000004900	Ucp1 Links NCBI RGD Ensembl Show fit	uncoupling protein 1
chr6_-_26051229 Show fit	3.46	ENSRNOT00000005855	Bre Links NCBI RGD Ensembl Show fit	brain and reproductive organ-expressed (TNFRSF1A modulator)
chr3_+_171213936 Show fit	3.41	ENSRNOT00000031586	Pck1 Links NCBI RGD Ensembl Show fit	phosphoenolpyruvate carboxykinase 1
chr6_-_122239614 Show fit	3.39	ENSRNOT00000005015	Galc Links NCBI RGD Ensembl Show fit	galactosylceramidase
chr5_+_59491096 Show fit	3.38	ENSRNOT00000019737 ENSRNOT00000036366 ENSRNOT00000083068	Clta Links NCBI RGD Ensembl Show fit	clathrin, light chain A
chr8_+_41336340 Show fit	3.36	ENSRNOT00000072049	Olr1225 Links NCBI RGD Ensembl Show fit	olfactory receptor 1225
chr2_+_86914989 Show fit	3.34	ENSRNOT00000085164 ENSRNOT00000081966	LOC100360380 Links NCBI RGD Ensembl Show fit	zinc finger protein 457-like
chr4_+_88184956 Show fit	3.32	ENSRNOT00000077129	Vom1r83 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 83
chr14_-_21898284 Show fit	3.25	ENSRNOT00000036314	Prr27 Links NCBI RGD Ensembl Show fit	proline rich 27
chr14_+_85230648 Show fit	3.19	ENSRNOT00000089866	Ap1b1 Links NCBI RGD Ensembl Show fit	adaptor-related protein complex 1, beta 1 subunit
chr16_+_13050305 Show fit	3.11	ENSRNOT00000077388	AABR07024735.1 Links NCBI RGD Ensembl Show fit
chr2_+_149899836 Show fit	3.02	ENSRNOT00000086481	RGD1560324 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein C130079G13
chr3_-_77883067 Show fit	3.01	ENSRNOT00000087979	Olr677 Links NCBI RGD Ensembl Show fit	olfactory receptor 677
chrX_+_45637415 Show fit	2.99	ENSRNOT00000050544	RGD1563378 Links NCBI RGD Ensembl Show fit	similar to ferritin heavy polypeptide-like 17
chr1_+_221236773 Show fit	2.97	ENSRNOT00000051979	Slc25a45 Links NCBI RGD Ensembl Show fit	solute carrier family 25, member 45
chr1_+_226091774 Show fit	2.89	ENSRNOT00000027693	Fads3 Links NCBI RGD Ensembl Show fit	fatty acid desaturase 3
chr2_+_196304492 Show fit	2.82	ENSRNOT00000028640	Lysmd1 Links NCBI RGD Ensembl Show fit	LysM domain containing 1
chr17_+_8558827 Show fit	2.82	ENSRNOT00000016187	Il9 Links NCBI RGD Ensembl Show fit	interleukin 9
chr9_+_49647257 Show fit	2.75	ENSRNOT00000021899	Mrps9 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein S9
chr7_-_12346475 Show fit	2.69	ENSRNOT00000060708	Mum1 Links NCBI RGD Ensembl Show fit	melanoma associated antigen (mutated) 1
chr12_+_6403940 Show fit	2.66	ENSRNOT00000083484	B3glct Links NCBI RGD Ensembl Show fit	beta 3-glucosyltransferase
chr1_-_238376841 Show fit	2.59	ENSRNOT00000076393	Tmc1 Links NCBI RGD Ensembl Show fit	transmembrane channel-like 1
chr1_-_8878136 Show fit	2.58	ENSRNOT00000064836 ENSRNOT00000075850	Vta1 Links NCBI RGD Ensembl Show fit	vesicle trafficking 1
chr1_+_41065716 Show fit	2.57	ENSRNOT00000035962	Ccdc170 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 170
chr12_-_30566032 Show fit	2.55	ENSRNOT00000093378	Gbas Links NCBI RGD Ensembl Show fit	glioblastoma amplified sequence
chr8_-_43796224 Show fit	2.50	ENSRNOT00000084315	Olr1330 Links NCBI RGD Ensembl Show fit	olfactory receptor 1330
chr1_+_264741911 Show fit	2.50	ENSRNOT00000019956	Sema4g Links NCBI RGD Ensembl Show fit	semaphorin 4G
chr3_-_153454160 Show fit	2.50	ENSRNOT00000010298	Ghrh Links NCBI RGD Ensembl Show fit	growth hormone releasing hormone
chr15_-_28446785 Show fit	2.42	ENSRNOT00000015439	Olr1638 Links NCBI RGD Ensembl Show fit	olfactory receptor 1638
chr11_-_43992598 Show fit	2.32	ENSRNOT00000002260	Cldnd1 Links NCBI RGD Ensembl Show fit	claudin domain containing 1

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View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
6.7	20.0	GO:0033512	L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512)
6.1	24.6	GO:0051958	methotrexate transport(GO:0051958)
5.9	17.6	GO:0019389	glucuronoside metabolic process(GO:0019389)
5.7	22.9	GO:0061622	glycolytic process through glucose-1-phosphate(GO:0061622)
5.0	15.0	GO:0097156	fasciculation of motor neuron axon(GO:0097156) regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001106)
5.0	14.9	GO:0045763	negative regulation of cellular amino acid metabolic process(GO:0045763)
4.5	13.6	GO:2000312	regulation of kainate selective glutamate receptor activity(GO:2000312)
4.3	13.0	GO:0060082	eye blink reflex(GO:0060082)
4.1	12.3	GO:2000682	positive regulation of rubidium ion transport(GO:2000682) positive regulation of rubidium ion transmembrane transporter activity(GO:2000688)
3.9	11.6	GO:0042822	pyridoxal phosphate metabolic process(GO:0042822)
3.6	21.5	GO:1900272	negative regulation of long-term synaptic potentiation(GO:1900272)
3.3	10.0	GO:0030186	melatonin metabolic process(GO:0030186)
2.8	8.5	GO:1903445	protein transport from ciliary membrane to plasma membrane(GO:1903445)
2.7	8.2	GO:0046078	dUMP metabolic process(GO:0046078)
2.5	7.6	GO:0007199	G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger(GO:0007199)
2.2	15.6	GO:0000160	phosphorelay signal transduction system(GO:0000160)
2.2	6.7	GO:0086024	adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
2.1	10.5	GO:0090063	positive regulation of microtubule nucleation(GO:0090063)
1.9	5.6	GO:0010980	regulation of vitamin D 24-hydroxylase activity(GO:0010979) positive regulation of vitamin D 24-hydroxylase activity(GO:0010980)
1.7	6.8	GO:0098923	retrograde trans-synaptic signaling by soluble gas(GO:0098923) trans-synaptic signaling by soluble gas(GO:0099543) trans-synaptic signaling by trans-synaptic complex(GO:0099545)
1.6	9.4	GO:0048669	collateral sprouting in absence of injury(GO:0048669)
1.5	10.6	GO:0006686	sphingomyelin biosynthetic process(GO:0006686)
1.5	10.2	GO:0000022	mitotic spindle elongation(GO:0000022) mitotic spindle midzone assembly(GO:0051256)
1.4	18.6	GO:0019227	neuronal action potential propagation(GO:0019227) action potential propagation(GO:0098870)
1.4	5.7	GO:1904959	regulation of cytochrome-c oxidase activity(GO:1904959)
1.4	9.7	GO:0007341	penetration of zona pellucida(GO:0007341)
1.3	10.3	GO:0071464	cellular response to hydrostatic pressure(GO:0071464)
1.2	3.7	GO:0010265	SCF complex assembly(GO:0010265)
1.1	10.1	GO:0090336	positive regulation of brown fat cell differentiation(GO:0090336)
1.1	5.5	GO:0006216	cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
1.0	12.5	GO:0046543	development of secondary female sexual characteristics(GO:0046543)
1.0	6.0	GO:0008050	female courtship behavior(GO:0008050)
1.0	8.8	GO:0016024	CDP-diacylglycerol biosynthetic process(GO:0016024)
0.9	3.7	GO:0010609	mRNA localization resulting in posttranscriptional regulation of gene expression(GO:0010609) positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902164)
0.9	3.4	GO:0006114	glycerol biosynthetic process(GO:0006114)
0.8	10.1	GO:0060159	regulation of dopamine receptor signaling pathway(GO:0060159)
0.8	8.5	GO:0043649	dicarboxylic acid catabolic process(GO:0043649)
0.7	9.0	GO:0030206	chondroitin sulfate biosynthetic process(GO:0030206)
0.7	13.1	GO:0070255	regulation of mucus secretion(GO:0070255)
0.7	18.2	GO:0010842	retina layer formation(GO:0010842)
0.7	6.8	GO:2000344	positive regulation of acrosome reaction(GO:2000344)
0.7	4.7	GO:0010529	regulation of transposition(GO:0010528) negative regulation of transposition(GO:0010529)
0.6	4.4	GO:0097428	protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.6	3.0	GO:0000066	mitochondrial ornithine transport(GO:0000066)
0.6	12.5	GO:0033327	Leydig cell differentiation(GO:0033327)
0.6	8.7	GO:0030277	maintenance of gastrointestinal epithelium(GO:0030277)
0.6	1.7	GO:0032066	nucleolus to nucleoplasm transport(GO:0032066)
0.6	3.4	GO:0006681	galactosylceramide metabolic process(GO:0006681)
0.6	13.9	GO:0003351	epithelial cilium movement(GO:0003351)
0.6	23.2	GO:0046470	phosphatidylcholine metabolic process(GO:0046470)
0.5	4.2	GO:0033133	positive regulation of glucokinase activity(GO:0033133)
0.5	19.9	GO:0001953	negative regulation of cell-matrix adhesion(GO:0001953) semaphorin-plexin signaling pathway(GO:0071526)
0.5	2.6	GO:0060005	vestibular reflex(GO:0060005)
0.5	4.1	GO:0051775	response to redox state(GO:0051775)
0.5	6.2	GO:0052695	cellular glucuronidation(GO:0052695)
0.5	7.7	GO:0051923	sulfation(GO:0051923)
0.5	8.9	GO:0046033	AMP metabolic process(GO:0046033)
0.5	26.7	GO:0048791	calcium ion-regulated exocytosis of neurotransmitter(GO:0048791)
0.5	7.6	GO:0030150	protein import into mitochondrial matrix(GO:0030150)
0.5	1.9	GO:0030050	vesicle transport along actin filament(GO:0030050)
0.4	2.2	GO:1903181	myoblast fate commitment(GO:0048625) regulation of dopamine biosynthetic process(GO:1903179) positive regulation of dopamine biosynthetic process(GO:1903181)
0.4	42.0	GO:0032091	negative regulation of protein binding(GO:0032091)
0.4	2.6	GO:0071985	multivesicular body sorting pathway(GO:0071985)
0.4	2.5	GO:0046005	positive regulation of circadian sleep/wake cycle, REM sleep(GO:0046005)
0.4	2.1	GO:2000327	positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327)
0.4	7.9	GO:1902187	negative regulation of viral release from host cell(GO:1902187)
0.4	6.1	GO:1902043	positive regulation of extrinsic apoptotic signaling pathway via death domain receptors(GO:1902043)
0.4	6.0	GO:0042737	drug catabolic process(GO:0042737)
0.4	5.0	GO:0038180	nerve growth factor signaling pathway(GO:0038180)
0.4	3.9	GO:0040037	negative regulation of fibroblast growth factor receptor signaling pathway(GO:0040037)
0.4	3.5	GO:0002024	diet induced thermogenesis(GO:0002024)
0.3	4.2	GO:0051386	regulation of neurotrophin TRK receptor signaling pathway(GO:0051386)
0.3	2.1	GO:0035426	extracellular matrix-cell signaling(GO:0035426)
0.3	10.9	GO:0015991	ATP hydrolysis coupled proton transport(GO:0015991)
0.3	7.6	GO:0048714	positive regulation of oligodendrocyte differentiation(GO:0048714)
0.3	8.4	GO:0045332	phospholipid translocation(GO:0045332)
0.3	2.1	GO:0035338	fatty acid elongation, monounsaturated fatty acid(GO:0034625) long-chain fatty-acyl-CoA biosynthetic process(GO:0035338)
0.3	8.5	GO:0006099	tricarboxylic acid cycle(GO:0006099)
0.3	4.9	GO:0032981	NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.3	5.5	GO:0048268	clathrin coat assembly(GO:0048268)
0.3	5.2	GO:0006607	NLS-bearing protein import into nucleus(GO:0006607) nuclear pore organization(GO:0006999)
0.3	26.5	GO:0043149	contractile actin filament bundle assembly(GO:0030038) stress fiber assembly(GO:0043149)
0.3	9.0	GO:1900078	positive regulation of cellular response to insulin stimulus(GO:1900078)
0.3	16.2	GO:0042773	ATP synthesis coupled electron transport(GO:0042773)
0.3	4.5	GO:1904707	positive regulation of vascular smooth muscle cell proliferation(GO:1904707)
0.3	9.5	GO:0051123	RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.3	2.8	GO:0032754	positive regulation of interleukin-5 production(GO:0032754)
0.2	3.2	GO:0006880	intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.2	6.3	GO:0001556	oocyte maturation(GO:0001556)
0.2	5.3	GO:0006450	regulation of translational fidelity(GO:0006450)
0.2	8.2	GO:0071542	dopaminergic neuron differentiation(GO:0071542)
0.2	6.7	GO:0034314	Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.2	4.5	GO:0043586	tongue development(GO:0043586)
0.2	4.4	GO:0006544	glycine metabolic process(GO:0006544)
0.2	11.6	GO:0051155	positive regulation of striated muscle cell differentiation(GO:0051155)
0.2	6.1	GO:0007257	activation of JUN kinase activity(GO:0007257)
0.2	7.3	GO:0006749	glutathione metabolic process(GO:0006749)
0.2	18.7	GO:0016579	protein deubiquitination(GO:0016579)
0.1	1.6	GO:0071578	zinc II ion transmembrane import(GO:0071578)
0.1	3.6	GO:0000027	ribosomal large subunit assembly(GO:0000027)
0.1	1.3	GO:0090161	Golgi ribbon formation(GO:0090161)
0.1	27.7	GO:0006814	sodium ion transport(GO:0006814)
0.1	9.3	GO:0006497	protein lipidation(GO:0006497)
0.1	1.9	GO:0034453	microtubule anchoring(GO:0034453)
0.1	6.2	GO:0072384	organelle transport along microtubule(GO:0072384)
0.1	7.3	GO:0090630	activation of GTPase activity(GO:0090630)
0.1	0.2	GO:1901668	regulation of superoxide dismutase activity(GO:1901668)
0.1	15.8	GO:0016236	macroautophagy(GO:0016236)
0.1	6.2	GO:0014909	smooth muscle cell migration(GO:0014909)
0.1	0.9	GO:1901673	regulation of mitotic spindle assembly(GO:1901673) negative regulation of cilium assembly(GO:1902018)
0.1	0.7	GO:0001845	phagolysosome assembly(GO:0001845) equilibrioception(GO:0050957)
0.1	14.1	GO:0002244	hematopoietic progenitor cell differentiation(GO:0002244)
0.1	3.5	GO:0045739	positive regulation of DNA repair(GO:0045739)
0.1	12.6	GO:0007286	spermatid development(GO:0007286)
0.1	1.8	GO:0035025	positive regulation of Rho protein signal transduction(GO:0035025)
0.1	0.8	GO:0045198	establishment of epithelial cell apical/basal polarity(GO:0045198)
0.1	8.4	GO:0006413	translational initiation(GO:0006413)
0.1	6.8	GO:0050821	protein stabilization(GO:0050821)
0.1	1.9	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1	4.1	GO:0090090	negative regulation of canonical Wnt signaling pathway(GO:0090090)
0.1	1.9	GO:0000186	activation of MAPKK activity(GO:0000186)
0.1	0.3	GO:0007195	adenylate cyclase-inhibiting dopamine receptor signaling pathway(GO:0007195)
0.0	3.8	GO:0035023	regulation of Rho protein signal transduction(GO:0035023)
0.0	0.7	GO:0032211	negative regulation of telomere maintenance via telomerase(GO:0032211)
0.0	4.0	GO:0007051	spindle organization(GO:0007051)
0.0	2.0	GO:1990748	cellular oxidant detoxification(GO:0098869) cellular detoxification(GO:1990748)
0.0	5.5	GO:0007264	small GTPase mediated signal transduction(GO:0007264)
0.0	23.3	GO:0050911	detection of chemical stimulus involved in sensory perception of smell(GO:0050911)
0.0	0.7	GO:0030819	positive regulation of cAMP biosynthetic process(GO:0030819)
0.0	3.3	GO:0007283	spermatogenesis(GO:0007283)
0.0	0.1	GO:0034498	early endosome to Golgi transport(GO:0034498)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
7.6	22.9	GO:0005945	6-phosphofructokinase complex(GO:0005945)
5.4	21.5	GO:1990761	growth cone lamellipodium(GO:1990761)
1.9	7.6	GO:0001405	presequence translocase-associated import motor(GO:0001405)
1.9	15.1	GO:0005869	dynactin complex(GO:0005869)
1.7	8.5	GO:0045252	oxoglutarate dehydrogenase complex(GO:0045252)
1.6	6.2	GO:0098574	cytoplasmic side of lysosomal membrane(GO:0098574)
1.3	13.0	GO:0048787	presynaptic active zone membrane(GO:0048787)
1.2	10.6	GO:0000138	Golgi trans cisterna(GO:0000138)
1.1	6.5	GO:0036157	outer dynein arm(GO:0036157)
1.1	8.4	GO:0005850	eukaryotic translation initiation factor 2 complex(GO:0005850)
0.9	18.6	GO:0001518	voltage-gated sodium channel complex(GO:0001518)
0.9	11.9	GO:0005885	Arp2/3 protein complex(GO:0005885)
0.9	10.9	GO:0033180	proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.8	5.6	GO:0001651	dense fibrillar component(GO:0001651)
0.8	5.6	GO:1990357	terminal web(GO:1990357)
0.7	9.5	GO:0000124	SAGA complex(GO:0000124)
0.7	13.2	GO:0031258	lamellipodium membrane(GO:0031258)
0.7	3.5	GO:0070552	BRISC complex(GO:0070552)
0.7	10.2	GO:0097431	mitotic spindle pole(GO:0097431) mitotic spindle midzone(GO:1990023)
0.6	1.7	GO:0030690	Noc1p-Noc2p complex(GO:0030690)
0.5	4.7	GO:0097433	dense body(GO:0097433)
0.5	5.2	GO:0044615	nuclear pore central transport channel(GO:0044613) nuclear pore nuclear basket(GO:0044615)
0.4	8.5	GO:0031907	peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.4	2.1	GO:0030015	CCR4-NOT core complex(GO:0030015)
0.4	6.8	GO:0017146	NMDA selective glutamate receptor complex(GO:0017146)
0.4	20.3	GO:0030964	mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.4	3.4	GO:0071439	clathrin complex(GO:0071439)
0.4	15.0	GO:0044295	axonal growth cone(GO:0044295)
0.3	7.4	GO:0001673	male germ cell nucleus(GO:0001673)
0.3	15.2	GO:0045171	intercellular bridge(GO:0045171)
0.3	9.3	GO:0032281	AMPA glutamate receptor complex(GO:0032281)
0.3	57.0	GO:0043204	perikaryon(GO:0043204)
0.3	0.8	GO:0031308	intrinsic component of nuclear outer membrane(GO:0031308) integral component of nuclear outer membrane(GO:0031309)
0.3	3.7	GO:0031045	dense core granule(GO:0031045)
0.3	3.2	GO:0061702	inflammasome complex(GO:0061702)
0.2	0.7	GO:1990879	CST complex(GO:1990879)
0.2	6.1	GO:0030673	axolemma(GO:0030673)
0.2	10.1	GO:0016235	aggresome(GO:0016235)
0.2	2.6	GO:0032426	stereocilium tip(GO:0032426)
0.2	6.7	GO:0005891	voltage-gated calcium channel complex(GO:0005891)
0.2	9.1	GO:0005643	nuclear pore(GO:0005643)
0.1	13.6	GO:0014069	postsynaptic density(GO:0014069) postsynaptic specialization(GO:0099572)
0.1	29.1	GO:0070382	exocytic vesicle(GO:0070382)
0.1	3.2	GO:0030131	clathrin adaptor complex(GO:0030131)
0.1	0.7	GO:0016461	unconventional myosin complex(GO:0016461)
0.1	8.1	GO:0031463	Cul3-RING ubiquitin ligase complex(GO:0031463)
0.1	5.6	GO:0000315	organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.1	5.7	GO:0005758	mitochondrial intermembrane space(GO:0005758)
0.1	10.3	GO:0043679	axon terminus(GO:0043679)
0.1	5.6	GO:0008076	voltage-gated potassium channel complex(GO:0008076)
0.1	11.0	GO:0005923	bicellular tight junction(GO:0005923)
0.1	22.9	GO:0016324	apical plasma membrane(GO:0016324)
0.1	1.9	GO:0035145	exon-exon junction complex(GO:0035145)
0.1	36.7	GO:0030425	dendrite(GO:0030425)
0.1	7.3	GO:0001669	acrosomal vesicle(GO:0001669)
0.1	3.8	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)
0.1	3.6	GO:0031461	cullin-RING ubiquitin ligase complex(GO:0031461)
0.1	17.0	GO:0045202	synapse(GO:0045202)
0.0	1.0	GO:0005834	heterotrimeric G-protein complex(GO:0005834)
0.0	5.0	GO:0005770	late endosome(GO:0005770)
0.0	0.9	GO:0005763	organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0	9.0	GO:0005929	cilium(GO:0005929)
0.0	13.3	GO:0005813	centrosome(GO:0005813)
0.0	43.3	GO:0005739	mitochondrion(GO:0005739)
0.0	6.0	GO:0000790	nuclear chromatin(GO:0000790)
0.0	6.3	GO:0005667	transcription factor complex(GO:0005667)
0.0	0.2	GO:0017119	Golgi transport complex(GO:0017119)
0.0	0.1	GO:0030008	TRAPP complex(GO:0030008)
0.0	4.1	GO:0000139	Golgi membrane(GO:0000139)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
6.1	24.6	GO:0015350	methotrexate transporter activity(GO:0015350)
6.0	42.0	GO:0004111	creatine kinase activity(GO:0004111)
5.7	22.9	GO:0003872	6-phosphofructokinase activity(GO:0003872)
5.0	20.0	GO:0016212	kynurenine-oxoglutarate transaminase activity(GO:0016212) kynurenine aminotransferase activity(GO:0036137)
5.0	19.8	GO:0060072	large conductance calcium-activated potassium channel activity(GO:0060072)
3.9	23.2	GO:0008970	phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
3.9	11.6	GO:0004647	phosphoserine phosphatase activity(GO:0004647)
3.0	15.0	GO:0042731	PH domain binding(GO:0042731)
3.0	9.0	GO:0030158	protein xylosyltransferase activity(GO:0030158)
2.8	8.5	GO:0004591	oxoglutarate dehydrogenase (succinyl-transferring) activity(GO:0004591)
2.2	15.6	GO:0000155	phosphorelay sensor kinase activity(GO:0000155)
2.1	10.6	GO:0033188	sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
2.0	17.6	GO:0008559	xenobiotic-transporting ATPase activity(GO:0008559)
1.8	47.9	GO:0008157	protein phosphatase 1 binding(GO:0008157)
1.7	20.4	GO:0004499	N,N-dimethylaniline monooxygenase activity(GO:0004499)
1.5	19.9	GO:0030215	semaphorin receptor binding(GO:0030215)
1.5	7.6	GO:0004969	histamine receptor activity(GO:0004969)
1.5	5.8	GO:0004127	cytidylate kinase activity(GO:0004127)
1.4	5.6	GO:0038181	bile acid receptor activity(GO:0038181) vitamin D response element binding(GO:0070644)
1.3	13.0	GO:0005412	glucose:sodium symporter activity(GO:0005412)
1.3	7.8	GO:0004366	glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
1.2	9.5	GO:0001075	transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly(GO:0001075)
1.2	13.1	GO:0005000	vasopressin receptor activity(GO:0005000)
1.2	4.7	GO:0034584	piRNA binding(GO:0034584)
1.1	9.1	GO:0005049	nuclear export signal receptor activity(GO:0005049)
1.0	12.3	GO:0019869	chloride channel inhibitor activity(GO:0019869)
1.0	8.9	GO:0004017	adenylate kinase activity(GO:0004017)
0.9	5.5	GO:0004126	cytidine deaminase activity(GO:0004126)
0.9	7.3	GO:0008430	selenium binding(GO:0008430)
0.9	3.5	GO:0017077	oxidative phosphorylation uncoupler activity(GO:0017077)
0.9	6.1	GO:0005078	MAP-kinase scaffold activity(GO:0005078)
0.8	2.5	GO:0031770	growth hormone-releasing hormone receptor binding(GO:0031770)
0.8	19.8	GO:0051537	2 iron, 2 sulfur cluster binding(GO:0051537)
0.7	4.4	GO:0047961	glycine N-acyltransferase activity(GO:0047961)
0.7	8.5	GO:0016290	palmitoyl-CoA hydrolase activity(GO:0016290)
0.7	6.0	GO:0004887	thyroid hormone receptor activity(GO:0004887)
0.6	4.5	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.6	17.7	GO:0031402	sodium ion binding(GO:0031402)
0.6	5.7	GO:0016531	metallochaperone activity(GO:0016530) copper chaperone activity(GO:0016531)
0.6	6.7	GO:0031698	beta-2 adrenergic receptor binding(GO:0031698)
0.5	10.9	GO:0046961	proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.5	10.0	GO:0008171	O-methyltransferase activity(GO:0008171)
0.5	4.0	GO:0004630	phospholipase D activity(GO:0004630)
0.5	6.8	GO:0042043	neurexin family protein binding(GO:0042043)
0.5	8.2	GO:0008253	5'-nucleotidase activity(GO:0008253)
0.5	8.4	GO:0004012	phospholipid-translocating ATPase activity(GO:0004012)
0.5	6.3	GO:0016500	protein-hormone receptor activity(GO:0016500)
0.4	33.2	GO:0030276	clathrin binding(GO:0030276)
0.4	14.9	GO:0050699	WW domain binding(GO:0050699)
0.4	4.2	GO:0004331	fructose-2,6-bisphosphate 2-phosphatase activity(GO:0004331)
0.4	10.5	GO:0070840	dynein complex binding(GO:0070840)
0.4	3.0	GO:0000064	L-ornithine transmembrane transporter activity(GO:0000064)
0.4	1.1	GO:0004605	phosphatidate cytidylyltransferase activity(GO:0004605)
0.4	5.3	GO:0002161	aminoacyl-tRNA editing activity(GO:0002161)
0.3	6.9	GO:0004602	glutathione peroxidase activity(GO:0004602)
0.3	11.8	GO:0001106	RNA polymerase II transcription corepressor activity(GO:0001106)
0.3	7.4	GO:0043014	alpha-tubulin binding(GO:0043014)
0.3	2.6	GO:0022833	mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.3	9.3	GO:0017147	Wnt-protein binding(GO:0017147)
0.3	13.6	GO:0035255	ionotropic glutamate receptor binding(GO:0035255)
0.3	5.2	GO:0005487	nucleocytoplasmic transporter activity(GO:0005487)
0.3	3.4	GO:0004550	nucleoside diphosphate kinase activity(GO:0004550)
0.3	10.1	GO:0001965	G-protein alpha-subunit binding(GO:0001965)
0.3	16.4	GO:0005080	protein kinase C binding(GO:0005080)
0.2	10.2	GO:0001786	phosphatidylserine binding(GO:0001786)
0.2	2.1	GO:0009922	fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.2	4.9	GO:0008137	NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.2	3.8	GO:0048018	receptor agonist activity(GO:0048018)
0.2	2.2	GO:0050897	cobalt ion binding(GO:0050897)
0.2	1.0	GO:0045322	unmethylated CpG binding(GO:0045322)
0.2	5.6	GO:0003785	actin monomer binding(GO:0003785)
0.2	0.7	GO:0004977	melanocortin receptor activity(GO:0004977)
0.2	4.5	GO:0004016	adenylate cyclase activity(GO:0004016)
0.2	3.2	GO:0008199	ferric iron binding(GO:0008199)
0.1	4.1	GO:0051879	Hsp90 protein binding(GO:0051879)
0.1	10.1	GO:0033613	activating transcription factor binding(GO:0033613)
0.1	8.4	GO:0003743	translation initiation factor activity(GO:0003743)
0.1	10.6	GO:0004843	thiol-dependent ubiquitin-specific protease activity(GO:0004843)
0.1	3.7	GO:0017025	TBP-class protein binding(GO:0017025)
0.1	2.3	GO:0005229	intracellular calcium activated chloride channel activity(GO:0005229)
0.1	7.4	GO:0008146	sulfotransferase activity(GO:0008146)
0.1	0.8	GO:0005169	neurotrophin TRKB receptor binding(GO:0005169)
0.1	13.5	GO:0003774	motor activity(GO:0003774)
0.1	3.5	GO:0005164	tumor necrosis factor receptor binding(GO:0005164)
0.1	7.3	GO:0005496	steroid binding(GO:0005496)
0.1	0.9	GO:0017151	DEAD/H-box RNA helicase binding(GO:0017151)
0.1	1.9	GO:0004709	MAP kinase kinase kinase activity(GO:0004709)
0.1	4.4	GO:0031491	nucleosome binding(GO:0031491)
0.1	7.4	GO:0016503	pheromone receptor activity(GO:0016503)
0.1	2.1	GO:0005109	frizzled binding(GO:0005109)
0.1	6.2	GO:0051082	unfolded protein binding(GO:0051082)
0.1	10.6	GO:0005088	Ras guanyl-nucleotide exchange factor activity(GO:0005088)
0.1	1.6	GO:0005385	zinc ion transmembrane transporter activity(GO:0005385)
0.1	11.5	GO:0008017	microtubule binding(GO:0008017)
0.1	6.9	GO:0030165	PDZ domain binding(GO:0030165)
0.1	3.6	GO:0019843	rRNA binding(GO:0019843)
0.1	7.3	GO:0005516	calmodulin binding(GO:0005516)
0.0	0.3	GO:0001591	dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591)
0.0	2.2	GO:0016279	lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.0	16.5	GO:0005549	odorant binding(GO:0005549)
0.0	3.6	GO:0042626	ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0	5.1	GO:0015293	symporter activity(GO:0015293)
0.0	1.3	GO:0005484	SNAP receptor activity(GO:0005484)
0.0	1.2	GO:0005158	insulin receptor binding(GO:0005158)
0.0	7.1	GO:0005096	GTPase activator activity(GO:0005096)
0.0	0.5	GO:0016854	racemase and epimerase activity(GO:0016854)
0.0	2.8	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds(GO:0004553)
0.0	7.2	GO:0001077	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077)
0.0	1.5	GO:0002039	p53 binding(GO:0002039)
0.0	2.8	GO:0070851	growth factor receptor binding(GO:0070851)
0.0	5.5	GO:0005525	GTP binding(GO:0005525)
0.0	6.8	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.0	0.5	GO:0042162	telomeric DNA binding(GO:0042162)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	19.8	PID HIF2PATHWAY	HIF-2-alpha transcription factor network
0.4	15.0	PID EPHA FWDPATHWAY	EPHA forward signaling
0.3	10.5	PID NCADHERIN PATHWAY	N-cadherin signaling events
0.2	6.1	SA B CELL RECEPTOR COMPLEXES	Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases.
0.2	4.1	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.2	17.2	PID MYC ACTIV PATHWAY	Validated targets of C-MYC transcriptional activation
0.2	4.4	PID NETRIN PATHWAY	Netrin-mediated signaling events
0.2	7.4	PID RXR VDR PATHWAY	RXR and RAR heterodimerization with other nuclear receptor
0.2	5.3	PID IL2 PI3K PATHWAY	IL2 signaling events mediated by PI3K
0.2	4.2	PID RET PATHWAY	Signaling events regulated by Ret tyrosine kinase
0.2	3.4	PID ARF 3PATHWAY	Arf1 pathway
0.1	13.1	WNT SIGNALING	Genes related to Wnt-mediated signal transduction
0.1	6.1	PID P73PATHWAY	p73 transcription factor network
0.1	16.4	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins
0.1	3.2	PID HNF3A PATHWAY	FOXA1 transcription factor network
0.1	8.8	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.1	1.7	PID TAP63 PATHWAY	Validated transcriptional targets of TAp63 isoforms
0.0	1.8	PID LYSOPHOSPHOLIPID PATHWAY	LPA receptor mediated events
0.0	0.8	PID SHP2 PATHWAY	SHP2 signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.3	21.0	REACTOME ABACAVIR TRANSPORT AND METABOLISM	Genes involved in Abacavir transport and metabolism
2.2	20.0	REACTOME TRYPTOPHAN CATABOLISM	Genes involved in Tryptophan catabolism
1.7	24.3	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters
1.1	27.9	REACTOME SYNTHESIS OF PC	Genes involved in Synthesis of PC
0.9	8.5	REACTOME ALPHA LINOLENIC ACID ALA METABOLISM	Genes involved in alpha-linolenic acid (ALA) metabolism
0.7	27.2	REACTOME GLYCOLYSIS	Genes involved in Glycolysis
0.7	11.7	REACTOME OTHER SEMAPHORIN INTERACTIONS	Genes involved in Other semaphorin interactions
0.6	8.2	REACTOME PYRIMIDINE CATABOLISM	Genes involved in Pyrimidine catabolism
0.5	7.7	REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS	Genes involved in Termination of O-glycan biosynthesis
0.4	10.9	REACTOME INSULIN RECEPTOR RECYCLING	Genes involved in Insulin receptor recycling
0.4	3.2	REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION	Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.4	3.4	REACTOME GAP JUNCTION DEGRADATION	Genes involved in Gap junction degradation
0.3	10.6	REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS	Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.3	6.2	REACTOME GLUCURONIDATION	Genes involved in Glucuronidation
0.3	15.6	REACTOME VOLTAGE GATED POTASSIUM CHANNELS	Genes involved in Voltage gated Potassium channels
0.3	13.3	REACTOME MITOCHONDRIAL PROTEIN IMPORT	Genes involved in Mitochondrial Protein Import
0.3	6.7	REACTOME DARPP 32 EVENTS	Genes involved in DARPP-32 events
0.2	6.9	REACTOME GLUTATHIONE CONJUGATION	Genes involved in Glutathione conjugation
0.2	16.4	REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY	Genes involved in Nuclear Receptor transcription pathway
0.2	5.0	REACTOME ARMS MEDIATED ACTIVATION	Genes involved in ARMS-mediated activation
0.2	6.9	REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS	Genes involved in Sphingolipid de novo biosynthesis
0.2	4.1	REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA	Genes involved in Circadian Repression of Expression by REV-ERBA
0.2	7.6	REACTOME AMINE LIGAND BINDING RECEPTORS	Genes involved in Amine ligand-binding receptors
0.2	15.1	REACTOME MHC CLASS II ANTIGEN PRESENTATION	Genes involved in MHC class II antigen presentation
0.2	15.0	REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS	Genes involved in Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
0.2	5.2	REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS	Genes involved in Transport of Ribonucleoproteins into the Host Nucleus
0.2	4.4	REACTOME DCC MEDIATED ATTRACTIVE SIGNALING	Genes involved in DCC mediated attractive signaling
0.2	8.4	REACTOME ION TRANSPORT BY P TYPE ATPASES	Genes involved in Ion transport by P-type ATPases
0.2	2.1	REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS	Genes involved in Synthesis of very long-chain fatty acyl-CoAs
0.1	4.4	REACTOME PHASE II CONJUGATION	Genes involved in Phase II conjugation
0.1	4.0	REACTOME STEROID HORMONES	Genes involved in Steroid hormones
0.1	2.6	REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT	Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)
0.1	2.2	REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA	Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.1	1.0	REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING	Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling
0.1	1.6	REACTOME ZINC TRANSPORTERS	Genes involved in Zinc transporters
0.1	1.3	REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS	Genes involved in Proteolytic cleavage of SNARE complex proteins
0.0	0.6	REACTOME PYRIMIDINE METABOLISM	Genes involved in Pyrimidine metabolism
0.0	4.5	REACTOME PEPTIDE LIGAND BINDING RECEPTORS	Genes involved in Peptide ligand-binding receptors
0.0	1.9	REACTOME GENERIC TRANSCRIPTION PATHWAY	Genes involved in Generic Transcription Pathway
0.0	3.8	REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION	Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0	1.9	REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX	Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex