GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Tfap2c Links NCBI RGD Ensembl	ENSRNOG00000005246	transcription factor AP-2 gamma

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Tfap2c	rn6_v1_chr3_+_170550314_170550314	0.00	9.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_226435979 Show fit	51.62	ENSRNOT00000048704 ENSRNOT00000036232 ENSRNOT00000035576 ENSRNOT00000036180 ENSRNOT00000036168 ENSRNOT00000047964 ENSRNOT00000036283 ENSRNOT00000007429	Syt7 Links NCBI RGD Ensembl Show fit	synaptotagmin 7
chrX_+_39711201 Show fit	29.82	ENSRNOT00000080512 ENSRNOT00000009802	Cnksr2 Links NCBI RGD Ensembl Show fit	connector enhancer of kinase suppressor of Ras 2
chr2_+_260884337 Show fit	27.09	ENSRNOT00000032808	Cryz Links NCBI RGD Ensembl Show fit	crystallin zeta
chr18_+_17091310 Show fit	26.75	ENSRNOT00000093285	Fhod3 Links NCBI RGD Ensembl Show fit	formin homology 2 domain containing 3
chr4_-_117268178 Show fit	25.58	ENSRNOT00000043201 ENSRNOT00000084049	Fbxo41 Links NCBI RGD Ensembl Show fit	F-box protein 41
chr5_+_151692108 Show fit	25.21	ENSRNOT00000086144	Fam46b Links NCBI RGD Ensembl Show fit	family with sequence similarity 46, member B
chr3_-_11382004 Show fit	25.20	ENSRNOT00000047921 ENSRNOT00000064039	Dnm1 Links NCBI RGD Ensembl Show fit	dynamin 1
chr9_-_82461903 Show fit	25.08	ENSRNOT00000026654	Ptprn Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, N
chr10_-_82197848 Show fit	23.31	ENSRNOT00000081307	Cacna1g Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 G
chr5_+_147323240 Show fit	23.23	ENSRNOT00000047152	Fndc5 Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 5
chr16_-_71319449 Show fit	22.55	ENSRNOT00000029284	Fgfr1 Links NCBI RGD Ensembl Show fit	Fibroblast growth factor receptor 1
chr7_-_130405347 Show fit	21.62	ENSRNOT00000013985	Cpt1b Links NCBI RGD Ensembl Show fit	carnitine palmitoyltransferase 1B
chr4_+_132137793 Show fit	20.69	ENSRNOT00000014455	Gpr27 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 27
chr5_-_124642569 Show fit	19.96	ENSRNOT00000010680	Prkaa2 Links NCBI RGD Ensembl Show fit	protein kinase AMP-activated catalytic subunit alpha 2
chr18_+_83471342 Show fit	19.94	ENSRNOT00000019384	Neto1 Links NCBI RGD Ensembl Show fit	neuropilin and tolloid like 1
chr16_-_71319052 Show fit	19.83	ENSRNOT00000050980	Fgfr1 Links NCBI RGD Ensembl Show fit	Fibroblast growth factor receptor 1
chr10_-_82197520 Show fit	19.57	ENSRNOT00000092024	Cacna1g Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 G
chr14_-_78707861 Show fit	19.45	ENSRNOT00000091927	Ppp2r2c Links NCBI RGD Ensembl Show fit	protein phosphatase 2, regulatory subunit B, gamma
chr6_-_105097054 Show fit	19.21	ENSRNOT00000048606	Slc8a3 Links NCBI RGD Ensembl Show fit	solute carrier family 8 member A3
chr10_-_51669297 Show fit	19.01	ENSRNOT00000071595	Arhgap44 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 44
chr13_-_102790639 Show fit	18.52	ENSRNOT00000003177	RGD1310587 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ14146
chr19_-_15840990 Show fit	18.45	ENSRNOT00000015583	Irx3 Links NCBI RGD Ensembl Show fit	iroquois homeobox 3
chr1_-_53038229 Show fit	18.12	ENSRNOT00000017282	Mpc1 Links NCBI RGD Ensembl Show fit	mitochondrial pyruvate carrier 1
chr15_-_48670257 Show fit	17.87	ENSRNOT00000071464	Fzd3 Links NCBI RGD Ensembl Show fit	frizzled class receptor 3
chr7_-_29070928 Show fit	17.86	ENSRNOT00000080939	Chpt1 Links NCBI RGD Ensembl Show fit	choline phosphotransferase 1
chr7_+_117409576 Show fit	16.89	ENSRNOT00000017067	Cyc1 Links NCBI RGD Ensembl Show fit	cytochrome c-1
chr11_+_82734613 Show fit	16.88	ENSRNOT00000074826	Tmem41a Links NCBI RGD Ensembl Show fit	transmembrane protein 41a
chr9_+_90857308 Show fit	16.82	ENSRNOT00000073993	LOC100911572 Links NCBI RGD Ensembl Show fit	collagen alpha-3(IV) chain-like
chr3_+_111597102 Show fit	16.22	ENSRNOT00000081462	Tyro3 Links NCBI RGD Ensembl Show fit	TYRO3 protein tyrosine kinase
chr8_+_63600663 Show fit	16.19	ENSRNOT00000012644	Hcn4 Links NCBI RGD Ensembl Show fit	hyperpolarization activated cyclic nucleotide-gated potassium channel 4
chr1_-_248376750 Show fit	16.18	ENSRNOT00000089073	Gldc Links NCBI RGD Ensembl Show fit	glycine decarboxylase
chr11_-_68842320 Show fit	15.89	ENSRNOT00000049180	Adcy5 Links NCBI RGD Ensembl Show fit	adenylate cyclase 5
chr6_+_9483594 Show fit	15.32	ENSRNOT00000089272	AABR07062799.2 Links NCBI RGD Ensembl Show fit
chrX_-_134866210 Show fit	15.22	ENSRNOT00000005331	Apln Links NCBI RGD Ensembl Show fit	apelin
chr10_+_57322331 Show fit	14.79	ENSRNOT00000041493	Kif1c Links NCBI RGD Ensembl Show fit	kinesin family member 1C
chr18_-_57245666 Show fit	14.70	ENSRNOT00000080365	Ablim3 Links NCBI RGD Ensembl Show fit	actin binding LIM protein family, member 3
chr5_-_65073012 Show fit	14.66	ENSRNOT00000007957	Grin3a Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor NMDA type subunit 3A
chr10_-_89916400 Show fit	14.60	ENSRNOT00000055194	Dusp3 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 3
chr6_+_137063611 Show fit	14.23	ENSRNOT00000017504	LOC691485 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC691485
chrX_-_104493714 Show fit	14.14	ENSRNOT00000064458 ENSRNOT00000080386	Pcdh19 Links NCBI RGD Ensembl Show fit	protocadherin 19
chr5_+_79055521 Show fit	14.00	ENSRNOT00000010333	Col27a1 Links NCBI RGD Ensembl Show fit	collagen type XXVII alpha 1 chain
chr17_+_36334147 Show fit	13.78	ENSRNOT00000050261	E2f3 Links NCBI RGD Ensembl Show fit	E2F transcription factor 3
chr8_+_117068582 Show fit	13.57	ENSRNOT00000073559	Amt Links NCBI RGD Ensembl Show fit	aminomethyltransferase
chr3_-_1924827 Show fit	13.20	ENSRNOT00000006162	Cacna1b Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 B
chr14_+_80248140 Show fit	13.06	ENSRNOT00000010852	Htra3 Links NCBI RGD Ensembl Show fit	HtrA serine peptidase 3
chr10_+_70262361 Show fit	12.87	ENSRNOT00000064625 ENSRNOT00000076973	Unc45b Links NCBI RGD Ensembl Show fit	unc-45 myosin chaperone B
chr5_-_74029238 Show fit	12.62	ENSRNOT00000031432	Frrs1l Links NCBI RGD Ensembl Show fit	ferric-chelate reductase 1-like
chr8_-_107681512 Show fit	12.57	ENSRNOT00000077963	Mras Links NCBI RGD Ensembl Show fit	muscle RAS oncogene homolog
chr6_-_132183434 Show fit	12.25	ENSRNOT00000079807	AABR07065498.1 Links NCBI RGD Ensembl Show fit
chr10_-_15311189 Show fit	12.21	ENSRNOT00000027371	Prr35 Links NCBI RGD Ensembl Show fit	proline rich 35
chr1_-_71290337 Show fit	12.13	ENSRNOT00000063956	Zfp667 Links NCBI RGD Ensembl Show fit	zinc finger protein 667
chr3_+_172385672 Show fit	11.94	ENSRNOT00000090989	Gnas Links NCBI RGD Ensembl Show fit	GNAS complex locus
chrX_+_15114892 Show fit	11.77	ENSRNOT00000078168	Wdr13 Links NCBI RGD Ensembl Show fit	WD repeat domain 13
chr1_+_220362064 Show fit	11.58	ENSRNOT00000074361	LOC108348067 Links NCBI RGD Ensembl Show fit	endosialin
chr1_-_214181686 Show fit	11.28	ENSRNOT00000022363 ENSRNOT00000079464	Hras Links NCBI RGD Ensembl Show fit	Harvey rat sarcoma virus oncogene
chr1_+_220446425 Show fit	11.01	ENSRNOT00000027339	LOC100911932 Links NCBI RGD Ensembl Show fit	endosialin-like
chr10_+_65767930 Show fit	10.93	ENSRNOT00000039954	Vtn Links NCBI RGD Ensembl Show fit	vitronectin
chr5_-_164747083 Show fit	10.77	ENSRNOT00000010433	Plod1 Links NCBI RGD Ensembl Show fit	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
chr9_+_101005082 Show fit	10.69	ENSRNOT00000082949	Neu4 Links NCBI RGD Ensembl Show fit	neuraminidase 4
chr14_+_39661968 Show fit	10.66	ENSRNOT00000064779	Gabra2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor alpha2 subunit
chr1_-_73753128 Show fit	10.35	ENSRNOT00000068459	Ttyh1 Links NCBI RGD Ensembl Show fit	tweety family member 1
chr16_-_20686317 Show fit	10.34	ENSRNOT00000060097	Crlf1 Links NCBI RGD Ensembl Show fit	cytokine receptor-like factor 1
chr1_-_64030175 Show fit	10.28	ENSRNOT00000089950	Tsen34l1 Links NCBI RGD Ensembl Show fit	tRNA splicing endonuclease subunit 34-like 1
chr5_+_169519212 Show fit	10.27	ENSRNOT00000024732	Chd5 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 5
chr1_-_84491466 Show fit	9.90	ENSRNOT00000034609	Map3k10 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase kinase kinase 10
chr5_-_139227196 Show fit	9.87	ENSRNOT00000050941	Foxo6 Links NCBI RGD Ensembl Show fit	forkhead box O6
chr9_+_47386626 Show fit	9.79	ENSRNOT00000021270	Slc9a2 Links NCBI RGD Ensembl Show fit	solute carrier family 9 member A2
chr19_+_2393059 Show fit	9.70	ENSRNOT00000018535	Cdh11 Links NCBI RGD Ensembl Show fit	cadherin 11
chr1_+_220353356 Show fit	9.56	ENSRNOT00000080189	Cd248 Links NCBI RGD Ensembl Show fit	CD248 molecule
chr2_+_207923775 Show fit	9.55	ENSRNOT00000019997 ENSRNOT00000051835	Kcnd3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily D member 3
chr10_-_68517564 Show fit	9.36	ENSRNOT00000086961	Asic2 Links NCBI RGD Ensembl Show fit	acid sensing ion channel subunit 2
chr1_+_30681681 Show fit	9.16	ENSRNOT00000015395	Rspo3 Links NCBI RGD Ensembl Show fit	R-spondin 3
chr9_+_17340341 Show fit	9.11	ENSRNOT00000026637 ENSRNOT00000026559 ENSRNOT00000042790 ENSRNOT00000044163 ENSRNOT00000083811	Vegfa Links NCBI RGD Ensembl Show fit	vascular endothelial growth factor A
chr5_+_18901039 Show fit	9.00	ENSRNOT00000012066	Fam110b Links NCBI RGD Ensembl Show fit	family with sequence similarity 110, member B
chr9_-_82673898 Show fit	8.98	ENSRNOT00000027165	Chpf Links NCBI RGD Ensembl Show fit	chondroitin polymerizing factor
chr7_+_116745061 Show fit	8.68	ENSRNOT00000076174	Rhpn1 Links NCBI RGD Ensembl Show fit	rhophilin, Rho GTPase binding protein 1
chr20_+_5815837 Show fit	8.58	ENSRNOT00000036999	Lhfpl5 Links NCBI RGD Ensembl Show fit	lipoma HMGIC fusion partner-like 5
chr15_+_61731735 Show fit	8.43	ENSRNOT00000015517	Kbtbd6 Links NCBI RGD Ensembl Show fit	kelch repeat and BTB domain containing 6
chr19_-_53688597 Show fit	8.38	ENSRNOT00000074448	Zcchc14 Links NCBI RGD Ensembl Show fit	zinc finger CCHC-type containing 14
chr14_+_83724933 Show fit	8.31	ENSRNOT00000029848	Pla2g3 Links NCBI RGD Ensembl Show fit	phospholipase A2, group III
chr10_+_56824505 Show fit	8.28	ENSRNOT00000067128	Slc16a11 Links NCBI RGD Ensembl Show fit	solute carrier family 16, member 11
chr1_-_18058055 Show fit	8.26	ENSRNOT00000020988	Ptprk Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, K
chr9_+_16737642 Show fit	7.94	ENSRNOT00000061430	Srf Links NCBI RGD Ensembl Show fit	serum response factor
chr3_+_123434409 Show fit	7.83	ENSRNOT00000028847	Atrn Links NCBI RGD Ensembl Show fit	attractin
chr8_-_68966108 Show fit	7.75	ENSRNOT00000012155	Smad6 Links NCBI RGD Ensembl Show fit	SMAD family member 6
chr4_-_82203154 Show fit	7.51	ENSRNOT00000086210	LOC100912608 Links NCBI RGD Ensembl Show fit	homeobox protein Hox-A10-like
chr19_+_37476095 Show fit	7.51	ENSRNOT00000092794 ENSRNOT00000023130	Hsd11b2 Links NCBI RGD Ensembl Show fit	hydroxysteroid 11-beta dehydrogenase 2
chr7_-_117259791 Show fit	7.49	ENSRNOT00000086550	Plec Links NCBI RGD Ensembl Show fit	plectin
chr3_+_171832500 Show fit	7.35	ENSRNOT00000007554	Vapb Links NCBI RGD Ensembl Show fit	VAMP associated protein B and C
chr4_-_82289672 Show fit	7.09	ENSRNOT00000036394	Hoxa10 Links NCBI RGD Ensembl Show fit	homeobox A10
chr7_-_117288018 Show fit	7.04	ENSRNOT00000091285	Plec Links NCBI RGD Ensembl Show fit	plectin
chr4_-_157829241 Show fit	7.00	ENSRNOT00000026184	Ltbr Links NCBI RGD Ensembl Show fit	lymphotoxin beta receptor
chr14_-_84978255 Show fit	6.93	ENSRNOT00000078179	Cabp7 Links NCBI RGD Ensembl Show fit	calcium binding protein 7
chr8_-_23063041 Show fit	6.90	ENSRNOT00000018416	Elavl3 Links NCBI RGD Ensembl Show fit	ELAV like RNA binding protein 3
chr8_+_116324040 Show fit	6.89	ENSRNOT00000081353	Hyal2 Links NCBI RGD Ensembl Show fit	hyaluronoglucosaminidase 2
chr1_-_99303048 Show fit	6.83	ENSRNOT00000025631	LOC687880 Links NCBI RGD Ensembl Show fit	similar to Kallikrein-1 precursor (Tissue kallikrein) (Kidney/pancreas/salivary gland kallikrein)
chr3_-_11410732 Show fit	6.81	ENSRNOT00000034930	RGD1561113 Links NCBI RGD Ensembl Show fit	similar to Hypothetical UPF0184 protein C9orf16 homolog
chr19_-_57699113 Show fit	6.73	ENSRNOT00000026767	Egln1 Links NCBI RGD Ensembl Show fit	egl-9 family hypoxia-inducible factor 1
chr10_-_109224370 Show fit	6.57	ENSRNOT00000005839	Aatk Links NCBI RGD Ensembl Show fit	apoptosis-associated tyrosine kinase
chr9_+_82120059 Show fit	6.51	ENSRNOT00000057368	Cdk5r2 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 5 regulatory subunit 2
chrX_-_32355296 Show fit	6.47	ENSRNOT00000081652 ENSRNOT00000065075	Ap1s2 Links NCBI RGD Ensembl Show fit	adaptor-related protein complex 1, sigma 2 subunit
chr3_+_160908769 Show fit	6.46	ENSRNOT00000030054	Sys1 Links NCBI RGD Ensembl Show fit	Sys1 golgi trafficking protein
chr6_-_99783047 Show fit	6.41	ENSRNOT00000009028	Sptb Links NCBI RGD Ensembl Show fit	spectrin, beta, erythrocytic
chr1_+_170383682 Show fit	6.30	ENSRNOT00000024224	Smpd1 Links NCBI RGD Ensembl Show fit	sphingomyelin phosphodiesterase 1
chr5_+_150080072 Show fit	6.24	ENSRNOT00000047917	Tmem200b Links NCBI RGD Ensembl Show fit	transmembrane protein 200B
chr15_-_3410423 Show fit	6.09	ENSRNOT00000080274	Adk Links NCBI RGD Ensembl Show fit	adenosine kinase
chr7_-_49250953 Show fit	6.08	ENSRNOT00000066975 ENSRNOT00000082141	Acss3 Links NCBI RGD Ensembl Show fit	acyl-CoA synthetase short-chain family member 3
chr11_+_28692708 Show fit	6.04	ENSRNOT00000002135	Krtap13-1 Links NCBI RGD Ensembl Show fit	keratin associated protein 13-1
chr1_+_100299626 Show fit	6.00	ENSRNOT00000092327 ENSRNOT00000044257	Shank1 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 1
chr5_+_123905166 Show fit	5.95	ENSRNOT00000082021	Dab1 Links NCBI RGD Ensembl Show fit	DAB1, reelin adaptor protein
chr8_-_63350269 Show fit	5.95	ENSRNOT00000042681	Cd276 Links NCBI RGD Ensembl Show fit	Cd276 molecule
chr2_-_260884449 Show fit	5.92	ENSRNOT00000032874	Tyw3 Links NCBI RGD Ensembl Show fit	tRNA-yW synthesizing protein 3 homolog
chr5_+_143500441 Show fit	5.91	ENSRNOT00000045513	Grik3 Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor kainate type subunit 3
chr5_+_162031722 Show fit	5.89	ENSRNOT00000020483	Lrrc38 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 38
chr6_-_86822094 Show fit	5.85	ENSRNOT00000006531	Fkbp3 Links NCBI RGD Ensembl Show fit	FK506 binding protein 3
chr9_+_16862248 Show fit	5.78	ENSRNOT00000080104 ENSRNOT00000024824	Ttbk1 Links NCBI RGD Ensembl Show fit	tau tubulin kinase 1
chr8_-_43854765 Show fit	5.47	ENSRNOT00000081506	Olr1335 Links NCBI RGD Ensembl Show fit	olfactory receptor 1335
chr5_-_64789318 Show fit	5.31	ENSRNOT00000078957	Mrpl50 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L50
chr3_-_105470475 Show fit	5.29	ENSRNOT00000011078	Gjd2 Links NCBI RGD Ensembl Show fit	gap junction protein, delta 2
chr10_+_65780494 Show fit	5.18	ENSRNOT00000013100	Poldip2 Links NCBI RGD Ensembl Show fit	DNA polymerase delta interacting protein 2
chr10_+_13836128 Show fit	4.96	ENSRNOT00000012720	Pgp Links NCBI RGD Ensembl Show fit	phosphoglycolate phosphatase
chr1_+_142679345 Show fit	4.92	ENSRNOT00000034267	Zscan2 Links NCBI RGD Ensembl Show fit	zinc finger and SCAN domain containing 2
chr5_-_160619650 Show fit	4.68	ENSRNOT00000089981	Tmem51 Links NCBI RGD Ensembl Show fit	transmembrane protein 51
chr1_+_220400855 Show fit	4.57	ENSRNOT00000027178	Slc29a2 Links NCBI RGD Ensembl Show fit	solute carrier family 29 member 2
chr1_-_218100272 Show fit	4.53	ENSRNOT00000028411 ENSRNOT00000088588	Ccnd1 Links NCBI RGD Ensembl Show fit	cyclin D1
chr12_-_30304036 Show fit	4.52	ENSRNOT00000001218	Nupr2 Links NCBI RGD Ensembl Show fit	nuclear protein 2, transcriptional regulator
chr15_+_23665202 Show fit	4.49	ENSRNOT00000089226	Samd4a Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 4A
chr1_+_15620653 Show fit	4.37	ENSRNOT00000017401	Map7 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 7
chr18_-_56331991 Show fit	4.12	ENSRNOT00000085841 ENSRNOT00000091220	Slc6a7 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 7
chr6_-_88232252 Show fit	4.11	ENSRNOT00000047597	Rpl10l Links NCBI RGD Ensembl Show fit	ribosomal protein L10-like
chr1_+_220307394 Show fit	4.00	ENSRNOT00000071891	LOC108348052 Links NCBI RGD Ensembl Show fit	equilibrative nucleoside transporter 2
chr8_+_81949877 Show fit	3.92	ENSRNOT00000030221	LOC100360828 Links NCBI RGD Ensembl Show fit	cAMP-regulated phosphoprotein 19-like
chr1_+_230305923 Show fit	3.78	ENSRNOT00000074432	Olr365 Links NCBI RGD Ensembl Show fit	olfactory receptor 365
chr6_-_107461041 Show fit	3.77	ENSRNOT00000058127	Heatr4 Links NCBI RGD Ensembl Show fit	HEAT repeat containing 4
chr5_-_135285311 Show fit	3.74	ENSRNOT00000088261 ENSRNOT00000085235	Mast2 Links NCBI RGD Ensembl Show fit	microtubule associated serine/threonine kinase 2
chr1_-_266333105 Show fit	3.67	ENSRNOT00000027093	Arl3 Links NCBI RGD Ensembl Show fit	ADP ribosylation factor like GTPase 3
chr3_+_93648343 Show fit	3.62	ENSRNOT00000091164	AABR07053136.1 Links NCBI RGD Ensembl Show fit
chr6_-_110904288 Show fit	3.58	ENSRNOT00000014645	Irf2bpl Links NCBI RGD Ensembl Show fit	interferon regulatory factor 2 binding protein-like
chr4_+_157230769 Show fit	3.57	ENSRNOT00000091464 ENSRNOT00000017472	Phb2 Links NCBI RGD Ensembl Show fit	prohibitin 2
chr4_+_57050214 Show fit	3.53	ENSRNOT00000025165	Ahcyl2 Links NCBI RGD Ensembl Show fit	adenosylhomocysteinase-like 2
chr3_+_177188044 Show fit	3.40	ENSRNOT00000022073	Tcea2 Links NCBI RGD Ensembl Show fit	transcription elongation factor A2
chr10_-_46145548 Show fit	3.36	ENSRNOT00000033483	Pld6 Links NCBI RGD Ensembl Show fit	phospholipase D family, member 6
chr1_+_165170645 Show fit	3.34	ENSRNOT00000022879	Lipt2 Links NCBI RGD Ensembl Show fit	lipoyl(octanoyl) transferase 2 (putative)
chr2_+_221823687 Show fit	3.11	ENSRNOT00000072735	Dpyd Links NCBI RGD Ensembl Show fit	dihydropyrimidine dehydrogenase
chr6_+_134958854 Show fit	3.08	ENSRNOT00000073950 ENSRNOT00000009377	Dync1h1 Links NCBI RGD Ensembl Show fit	dynein cytoplasmic 1 heavy chain 1
chr10_-_43895376 Show fit	3.06	ENSRNOT00000031811	Olr1413 Links NCBI RGD Ensembl Show fit	olfactory receptor 1413
chr17_+_31236015 Show fit	3.05	ENSRNOT00000023149	Slc22a23 Links NCBI RGD Ensembl Show fit	solute carrier family 22, member 23
chr17_+_5382034 Show fit	3.04	ENSRNOT00000037597	Golm1 Links NCBI RGD Ensembl Show fit	golgi membrane protein 1
chr18_+_56887354 Show fit	2.77	ENSRNOT00000044346 ENSRNOT00000066133	Csnk1a1 Links NCBI RGD Ensembl Show fit	casein kinase 1, alpha 1
chr8_+_48094673 Show fit	2.55	ENSRNOT00000008614	Nectin1 Links NCBI RGD Ensembl Show fit	nectin cell adhesion molecule 1
chr7_+_130532435 Show fit	2.41	ENSRNOT00000092672 ENSRNOT00000092535	Shank3 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 3
chr5_-_86696388 Show fit	2.41	ENSRNOT00000007812	Megf9 Links NCBI RGD Ensembl Show fit	multiple EGF-like-domains 9
chr1_-_174588529 Show fit	2.28	ENSRNOT00000017485	Dennd5a Links NCBI RGD Ensembl Show fit	DENN domain containing 5A
chr1_-_99955717 Show fit	2.24	ENSRNOT00000079624	Klk1c6 Links NCBI RGD Ensembl Show fit	kallikrein 1-related peptidase C6
chr2_-_187863503 Show fit	2.24	ENSRNOT00000093036 ENSRNOT00000026705 ENSRNOT00000082174	Lmna Links NCBI RGD Ensembl Show fit	lamin A/C
chr1_-_146029840 Show fit	2.23	ENSRNOT00000016455	Mesdc1 Links NCBI RGD Ensembl Show fit	mesoderm development candidate 1
chr1_-_82108083 Show fit	2.22	ENSRNOT00000027677 ENSRNOT00000084530	Gsk3a Links NCBI RGD Ensembl Show fit	glycogen synthase kinase 3 alpha
chr10_+_90134193 Show fit	2.18	ENSRNOT00000028375	G6pc3 Links NCBI RGD Ensembl Show fit	glucose 6 phosphatase catalytic subunit 3
chr7_-_101140308 Show fit	2.04	ENSRNOT00000006279	Fam84b Links NCBI RGD Ensembl Show fit	family with sequence similarity 84, member B
chr11_-_45510961 Show fit	2.00	ENSRNOT00000002238	Tomm70 Links NCBI RGD Ensembl Show fit	translocase of outer mitochondrial membrane 70
chr7_+_2504695 Show fit	1.99	ENSRNOT00000003965	Atp5b Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
chr1_-_99894353 Show fit	1.47	ENSRNOT00000045756	Klk1c10 Links NCBI RGD Ensembl Show fit	kallikrein 1-related peptidase C10
chr19_-_26181449 Show fit	1.23	ENSRNOT00000036953	LOC685513 Links NCBI RGD Ensembl Show fit	similar to Guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-12 subunit precursor
chr3_-_8432593 Show fit	1.22	ENSRNOT00000090574	AC114363.1 Links NCBI RGD Ensembl Show fit
chr10_-_65780349 Show fit	1.21	ENSRNOT00000013220	Tmem199 Links NCBI RGD Ensembl Show fit	transmembrane protein 199
chr19_-_37938857 Show fit	1.21	ENSRNOT00000026730	Slc12a4 Links NCBI RGD Ensembl Show fit	solute carrier family 12 member 4
chr3_+_159887036 Show fit	1.16	ENSRNOT00000031868	R3hdml Links NCBI RGD Ensembl Show fit	R3H domain containing-like
chr18_-_29497410 Show fit	1.04	ENSRNOT00000024671	Sra1 Links NCBI RGD Ensembl Show fit	steroid receptor RNA activator 1
chr2_-_96520137 Show fit	0.97	ENSRNOT00000066966	Zc2hc1a Links NCBI RGD Ensembl Show fit	zinc finger, C2HC-type containing 1A
chr16_+_55152748 Show fit	0.96	ENSRNOT00000000121	Fgf20 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 20
chr20_+_8325041 Show fit	0.90	ENSRNOT00000000640	Cmtr1 Links NCBI RGD Ensembl Show fit	cap methyltransferase 1
chr9_-_16611899 Show fit	0.80	ENSRNOT00000089168	Mea1 Links NCBI RGD Ensembl Show fit	male-enhanced antigen 1
chr12_+_9464026 Show fit	0.79	ENSRNOT00000048188	Cdx2 Links NCBI RGD Ensembl Show fit	caudal type homeo box 2
chr2_-_187149017 Show fit	0.73	ENSRNOT00000092760	Ntrk1 Links NCBI RGD Ensembl Show fit	neurotrophic receptor tyrosine kinase 1
chr20_-_27308069 Show fit	0.65	ENSRNOT00000056047	Slc25a16 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 16
chr12_-_41671437 Show fit	0.64	ENSRNOT00000001883	Lhx5 Links NCBI RGD Ensembl Show fit	LIM homeobox 5
chr1_-_80630038 Show fit	0.62	ENSRNOT00000025281	Tomm40 Links NCBI RGD Ensembl Show fit	translocase of outer mitochondrial membrane 40
chr16_+_60925093 Show fit	0.60	ENSRNOT00000015813	Tnks Links NCBI RGD Ensembl Show fit	tankyrase
chr9_+_121802673 Show fit	0.54	ENSRNOT00000086534	Yes1 Links NCBI RGD Ensembl Show fit	YES proto-oncogene 1, Src family tyrosine kinase
chr8_-_56696968 Show fit	0.54	ENSRNOT00000016637	Zc3h12c Links NCBI RGD Ensembl Show fit	zinc finger CCCH type containing 12C
chr1_-_266934303 Show fit	0.52	ENSRNOT00000036202	Calhm3 Links NCBI RGD Ensembl Show fit	calcium homeostasis modulator 3
chr18_+_56887722 Show fit	0.38	ENSRNOT00000078783	Csnk1a1 Links NCBI RGD Ensembl Show fit	casein kinase 1, alpha 1
chr11_-_83546674 Show fit	0.35	ENSRNOT00000044896	Ephb3 Links NCBI RGD Ensembl Show fit	Eph receptor B3
chr3_+_108795235 Show fit	0.20	ENSRNOT00000007028	Spred1 Links NCBI RGD Ensembl Show fit	sprouty-related, EVH1 domain containing 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
17.2	51.6	GO:1990926	short-term synaptic potentiation(GO:1990926)
14.1	42.4	GO:0048378	ventricular zone neuroblast division(GO:0021847) fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development(GO:0035607) lateral mesodermal cell fate commitment(GO:0048372) lateral mesodermal cell fate specification(GO:0048377) regulation of lateral mesodermal cell fate specification(GO:0048378)
7.4	29.7	GO:0006546	glycine catabolic process(GO:0006546) glycine decarboxylation via glycine cleavage system(GO:0019464)
7.1	42.9	GO:0010045	response to nickel cation(GO:0010045)
6.9	20.7	GO:1900738	positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway(GO:1900738)
6.6	19.9	GO:2000312	regulation of kainate selective glutamate receptor activity(GO:2000312)
6.0	18.1	GO:0061732	mitochondrial acetyl-CoA biosynthetic process from pyruvate(GO:0061732)
6.0	17.9	GO:0006663	platelet activating factor biosynthetic process(GO:0006663)
4.8	19.0	GO:0098886	modification of dendritic spine(GO:0098886)
4.6	18.5	GO:0072086	specification of loop of Henle identity(GO:0072086)
4.2	16.9	GO:0042776	mitochondrial ATP synthesis coupled proton transport(GO:0042776)
4.0	11.9	GO:0040032	post-embryonic body morphogenesis(GO:0040032)
3.8	15.2	GO:0043397	corticotropin-releasing hormone secretion(GO:0043396) regulation of corticotropin-releasing hormone secretion(GO:0043397)
3.6	25.2	GO:0016185	synaptic vesicle budding from presynaptic endocytic zone membrane(GO:0016185)
3.6	10.8	GO:0046946	hydroxylysine metabolic process(GO:0046946) hydroxylysine biosynthetic process(GO:0046947)
3.6	17.9	GO:0045448	regulation of mitotic cell cycle, embryonic(GO:0009794) serotonergic neuron axon guidance(GO:0036515) mitotic cell cycle, embryonic(GO:0045448)
3.2	16.2	GO:1904045	cellular response to aldosterone(GO:1904045)
3.0	9.1	GO:0060948	neuropilin signaling pathway(GO:0038189) VEGF-activated neuropilin signaling pathway(GO:0038190) cardiac vascular smooth muscle cell development(GO:0060948) positive regulation of lymphangiogenesis(GO:1901492)
2.8	14.0	GO:0003431	growth plate cartilage chondrocyte development(GO:0003431)
2.6	7.9	GO:1900222	negative regulation of beta-amyloid clearance(GO:1900222)
2.6	23.2	GO:0090336	positive regulation of brown fat cell differentiation(GO:0090336)
2.6	10.3	GO:0000379	tRNA-type intron splice site recognition and cleavage(GO:0000379)
2.5	36.9	GO:0061469	regulation of type B pancreatic cell proliferation(GO:0061469)
2.4	19.2	GO:1990034	calcium ion export from cell(GO:1990034)
2.1	27.1	GO:0042178	xenobiotic catabolic process(GO:0042178)
2.1	10.3	GO:2000672	negative regulation of motor neuron apoptotic process(GO:2000672)
2.0	6.1	GO:0009216	purine deoxyribonucleotide biosynthetic process(GO:0009153) purine deoxyribonucleoside triphosphate biosynthetic process(GO:0009216) AMP salvage(GO:0044209) adenosine biosynthetic process(GO:0046086)
2.0	5.9	GO:0021577	hindbrain structural organization(GO:0021577) cerebellum structural organization(GO:0021589) neuronal-glial interaction involved in cerebral cortex radial glia guided migration(GO:0021812)
2.0	5.9	GO:0045077	negative regulation of interferon-gamma biosynthetic process(GO:0045077)
1.9	7.8	GO:0007352	zygotic specification of dorsal/ventral axis(GO:0007352)
1.9	11.3	GO:2000630	positive regulation of miRNA metabolic process(GO:2000630)
1.8	26.7	GO:0051639	actin filament network formation(GO:0051639)
1.7	10.3	GO:0035093	spermatogenesis, exchange of chromosomal proteins(GO:0035093)
1.7	6.7	GO:0051344	negative regulation of cyclic-nucleotide phosphodiesterase activity(GO:0051344)
1.6	6.5	GO:0021586	pons maturation(GO:0021586)
1.6	15.9	GO:0007191	adenylate cyclase-activating dopamine receptor signaling pathway(GO:0007191)
1.5	4.6	GO:0015864	pyrimidine nucleoside transport(GO:0015864)
1.5	6.0	GO:0050893	sensory processing(GO:0050893)
1.5	7.3	GO:0006987	activation of signaling protein activity involved in unfolded protein response(GO:0006987) negative regulation by virus of viral protein levels in host cell(GO:0046725)
1.4	6.9	GO:0019064	fusion of virus membrane with host plasma membrane(GO:0019064) membrane fusion involved in viral entry into host cell(GO:0039663) multi-organism membrane fusion(GO:0044800)
1.3	9.4	GO:0050915	regulation of systemic arterial blood pressure by baroreceptor feedback(GO:0003025) sensory perception of sour taste(GO:0050915)
1.3	20.0	GO:0045821	positive regulation of glycolytic process(GO:0045821)
1.2	5.0	GO:0006114	glycerol biosynthetic process(GO:0006114)
1.2	10.7	GO:0006689	ganglioside catabolic process(GO:0006689)
1.1	4.5	GO:0000320	re-entry into mitotic cell cycle(GO:0000320)
1.1	3.4	GO:0030719	oocyte construction(GO:0007308) oocyte axis specification(GO:0007309) oocyte anterior/posterior axis specification(GO:0007314) pole plasm assembly(GO:0007315) maternal determination of anterior/posterior axis, embryo(GO:0008358) P granule organization(GO:0030719)
1.1	3.3	GO:0009106	lipoate metabolic process(GO:0009106)
1.1	10.9	GO:0061302	smooth muscle cell-matrix adhesion(GO:0061302)
1.0	6.3	GO:0023021	termination of signal transduction(GO:0023021)
1.0	3.1	GO:0006214	thymidine catabolic process(GO:0006214) pyrimidine deoxyribonucleoside catabolic process(GO:0046127)
1.0	16.2	GO:0060068	vagina development(GO:0060068) neuron cellular homeostasis(GO:0070050)
1.0	14.7	GO:0060134	prepulse inhibition(GO:0060134)
0.9	15.5	GO:0070262	peptidyl-serine dephosphorylation(GO:0070262)
0.9	7.2	GO:0046543	development of secondary female sexual characteristics(GO:0046543)
0.9	9.8	GO:1990118	sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.8	8.3	GO:0019372	lipoxygenase pathway(GO:0019372)
0.8	14.5	GO:0031581	hemidesmosome assembly(GO:0031581)
0.8	9.1	GO:0097623	potassium ion export across plasma membrane(GO:0097623)
0.7	9.0	GO:0030206	chondroitin sulfate biosynthetic process(GO:0030206)
0.7	2.2	GO:0044027	hypermethylation of CpG island(GO:0044027)
0.7	9.7	GO:0021957	corticospinal tract morphogenesis(GO:0021957)
0.7	9.6	GO:0060033	anatomical structure regression(GO:0060033)
0.7	9.2	GO:2000052	positive regulation of non-canonical Wnt signaling pathway(GO:2000052)
0.6	8.6	GO:0060088	auditory receptor cell stereocilium organization(GO:0060088)
0.6	2.4	GO:0097117	guanylate kinase-associated protein clustering(GO:0097117)
0.6	7.5	GO:0001977	renal system process involved in regulation of blood volume(GO:0001977)
0.5	14.8	GO:0000188	inactivation of MAPK activity(GO:0000188)
0.5	5.9	GO:0007196	adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196)
0.5	3.7	GO:0042090	interleukin-12 biosynthetic process(GO:0042090) regulation of interleukin-12 biosynthetic process(GO:0045075)
0.5	1.5	GO:0035105	sterol regulatory element binding protein import into nucleus(GO:0035105) negative regulation of adipose tissue development(GO:1904178)
0.5	6.6	GO:0010839	negative regulation of keratinocyte proliferation(GO:0010839)
0.5	3.5	GO:0033353	S-adenosylmethionine cycle(GO:0033353)
0.5	2.0	GO:0006933	negative regulation of cell adhesion involved in substrate-bound cell migration(GO:0006933)
0.5	12.6	GO:1900449	regulation of glutamate receptor signaling pathway(GO:1900449)
0.5	13.2	GO:0001956	positive regulation of neurotransmitter secretion(GO:0001956)
0.4	14.8	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.4	5.9	GO:0007256	activation of JNKK activity(GO:0007256)
0.4	4.1	GO:0035524	proline transmembrane transport(GO:0035524)
0.4	6.5	GO:0000042	protein targeting to Golgi(GO:0000042)
0.4	5.4	GO:0032482	Rab protein signal transduction(GO:0032482)
0.4	4.0	GO:1901642	nucleoside transmembrane transport(GO:1901642)
0.3	2.6	GO:1902414	protein localization to cell junction(GO:1902414)
0.3	3.2	GO:1904424	regulation of GTP binding(GO:1904424)
0.3	21.6	GO:0015909	long-chain fatty acid transport(GO:0015909)
0.3	0.6	GO:0070213	protein auto-ADP-ribosylation(GO:0070213)
0.3	0.9	GO:0036451	cap mRNA methylation(GO:0036451)
0.3	13.1	GO:0030514	negative regulation of BMP signaling pathway(GO:0030514)
0.3	7.1	GO:0060065	uterus development(GO:0060065)
0.3	18.7	GO:0061077	chaperone-mediated protein folding(GO:0061077)
0.3	2.8	GO:0070345	negative regulation of fat cell proliferation(GO:0070345)
0.3	10.7	GO:0007214	gamma-aminobutyric acid signaling pathway(GO:0007214)
0.2	3.1	GO:0034063	stress granule assembly(GO:0034063)
0.2	4.4	GO:0033327	Leydig cell differentiation(GO:0033327)
0.2	2.2	GO:0015760	hexose phosphate transport(GO:0015712) glucose-6-phosphate transport(GO:0015760)
0.2	5.2	GO:0070584	mitochondrion morphogenesis(GO:0070584)
0.2	6.4	GO:0006779	porphyrin-containing compound biosynthetic process(GO:0006779)
0.2	4.5	GO:0071157	negative regulation of cell cycle arrest(GO:0071157)
0.2	10.3	GO:0046847	filopodium assembly(GO:0046847)
0.2	14.7	GO:0030032	lamellipodium assembly(GO:0030032)
0.2	0.7	GO:0043137	DNA replication, removal of RNA primer(GO:0043137)
0.2	0.6	GO:0021937	cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation(GO:0021937)
0.2	4.1	GO:0000027	ribosomal large subunit assembly(GO:0000027)
0.1	0.7	GO:0061368	behavioral response to chemical pain(GO:0061366) behavioral response to formalin induced pain(GO:0061368)
0.1	6.5	GO:0060612	adipose tissue development(GO:0060612)
0.1	7.0	GO:2001238	positive regulation of extrinsic apoptotic signaling pathway(GO:2001238)
0.1	5.8	GO:0021762	substantia nigra development(GO:0021762)
0.1	7.8	GO:0040014	regulation of multicellular organism growth(GO:0040014)
0.1	4.6	GO:0060999	positive regulation of dendritic spine development(GO:0060999)
0.1	3.7	GO:0042073	intraciliary transport(GO:0042073)
0.1	12.8	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156)
0.1	0.8	GO:0014807	regulation of somitogenesis(GO:0014807)
0.0	4.5	GO:0045727	positive regulation of translation(GO:0045727)
0.0	0.6	GO:0030150	protein import into mitochondrial matrix(GO:0030150)
0.0	1.0	GO:0060043	regulation of cardiac muscle cell proliferation(GO:0060043)
0.0	2.3	GO:0042147	retrograde transport, endosome to Golgi(GO:0042147)
0.0	0.4	GO:0022038	corpus callosum development(GO:0022038)
0.0	1.0	GO:2000273	positive regulation of receptor activity(GO:2000273)
0.0	2.7	GO:0000086	G2/M transition of mitotic cell cycle(GO:0000086)
0.0	1.2	GO:1902476	chloride transmembrane transport(GO:1902476)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.4	16.2	GO:0098855	HCN channel complex(GO:0098855)
5.4	16.2	GO:0005960	glycine cleavage complex(GO:0005960)
4.7	51.6	GO:0032009	early phagosome(GO:0032009)
3.4	10.3	GO:0097058	CRLF-CLCF1 complex(GO:0097058)
2.2	6.5	GO:0016533	cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)
2.1	10.3	GO:0030868	smooth endoplasmic reticulum membrane(GO:0030868) smooth endoplasmic reticulum part(GO:0097425)
2.1	10.3	GO:0000214	tRNA-intron endonuclease complex(GO:0000214)
1.8	10.9	GO:0048237	rough endoplasmic reticulum lumen(GO:0048237)
1.7	19.9	GO:0098839	postsynaptic density membrane(GO:0098839)
1.5	16.9	GO:0005750	mitochondrial respiratory chain complex III(GO:0005750)
1.5	19.8	GO:0017146	NMDA selective glutamate receptor complex(GO:0017146)
1.3	25.2	GO:0043196	varicosity(GO:0043196)
1.2	14.0	GO:0005583	fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
1.1	17.9	GO:0032433	filopodium tip(GO:0032433)
1.1	20.0	GO:0031588	nucleotide-activated protein kinase complex(GO:0031588)
1.1	26.7	GO:0005865	striated muscle thin filament(GO:0005865)
1.1	47.7	GO:0005891	voltage-gated calcium channel complex(GO:0005891)
0.7	8.6	GO:0032426	stereocilium tip(GO:0032426)
0.7	14.5	GO:0030056	hemidesmosome(GO:0030056)
0.7	18.9	GO:0032588	trans-Golgi network membrane(GO:0032588)
0.6	6.4	GO:0014731	spectrin(GO:0008091) spectrin-associated cytoskeleton(GO:0014731)
0.6	15.9	GO:0008074	guanylate cyclase complex, soluble(GO:0008074)
0.6	18.1	GO:0031304	intrinsic component of mitochondrial inner membrane(GO:0031304) integral component of mitochondrial inner membrane(GO:0031305)
0.6	15.5	GO:0000159	protein phosphatase type 2A complex(GO:0000159)
0.5	9.5	GO:0097038	perinuclear endoplasmic reticulum(GO:0097038)
0.5	10.7	GO:0098563	integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563) GABA-A receptor complex(GO:1902711)
0.4	9.7	GO:0016581	NuRD complex(GO:0016581) CHD-type complex(GO:0090545)
0.4	7.3	GO:0070971	endoplasmic reticulum exit site(GO:0070971)
0.4	6.9	GO:0031362	anchored component of external side of plasma membrane(GO:0031362)
0.4	19.0	GO:0048786	presynaptic active zone(GO:0048786)
0.4	14.6	GO:0001772	immunological synapse(GO:0001772)
0.3	23.2	GO:0005778	peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.3	50.4	GO:0005741	mitochondrial outer membrane(GO:0005741)
0.3	2.6	GO:0032584	growth cone membrane(GO:0032584)
0.3	3.2	GO:0030877	beta-catenin destruction complex(GO:0030877)
0.3	8.3	GO:0042629	mast cell granule(GO:0042629)
0.3	1.2	GO:0030663	COPI-coated vesicle membrane(GO:0030663)
0.3	6.3	GO:0042599	lamellar body(GO:0042599)
0.3	6.8	GO:0030867	rough endoplasmic reticulum membrane(GO:0030867)
0.3	5.3	GO:0005922	connexon complex(GO:0005922)
0.2	2.0	GO:0045261	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275) proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.2	5.9	GO:0032839	dendrite cytoplasm(GO:0032839)
0.2	14.8	GO:0005871	kinesin complex(GO:0005871)
0.2	0.7	GO:0005760	gamma DNA polymerase complex(GO:0005760)
0.2	16.9	GO:0001725	stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517)
0.2	1.5	GO:0005638	lamin filament(GO:0005638)
0.2	6.6	GO:0044295	axonal growth cone(GO:0044295)
0.2	16.5	GO:0005604	basement membrane(GO:0005604)
0.2	6.5	GO:0030173	integral component of Golgi membrane(GO:0030173)
0.1	25.1	GO:0043204	perikaryon(GO:0043204)
0.1	9.0	GO:0032580	Golgi cisterna membrane(GO:0032580)
0.1	16.8	GO:0045211	postsynaptic membrane(GO:0045211)
0.1	34.7	GO:0043235	receptor complex(GO:0043235)
0.1	5.2	GO:0009295	nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.1	3.1	GO:0005868	cytoplasmic dynein complex(GO:0005868)
0.1	3.7	GO:0032391	photoreceptor connecting cilium(GO:0032391)
0.1	2.3	GO:0030904	retromer complex(GO:0030904)
0.1	5.3	GO:0000315	organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.1	3.9	GO:0000307	cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1	8.3	GO:0031256	leading edge membrane(GO:0031256)
0.1	6.3	GO:0043197	dendritic spine(GO:0043197)
0.1	6.5	GO:0030117	membrane coat(GO:0030117) coated membrane(GO:0048475)
0.1	5.9	GO:0005903	brush border(GO:0005903)
0.1	3.9	GO:0031463	Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0	8.7	GO:0030424	axon(GO:0030424)
0.0	3.5	GO:0000139	Golgi membrane(GO:0000139)
0.0	1.2	GO:0005834	heterotrimeric G-protein complex(GO:0005834)
0.0	17.4	GO:0005815	microtubule organizing center(GO:0005815)
0.0	8.7	GO:0015630	microtubule cytoskeleton(GO:0015630)
0.0	21.9	GO:0005887	integral component of plasma membrane(GO:0005887)
0.0	8.7	GO:0019866	organelle inner membrane(GO:0019866)
0.0	1.0	GO:0045171	intercellular bridge(GO:0045171)
0.0	5.5	GO:0005578	proteinaceous extracellular matrix(GO:0005578)
0.0	0.8	GO:0017053	transcriptional repressor complex(GO:0017053)
0.0	53.5	GO:0016021	integral component of membrane(GO:0016021)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
8.6	42.9	GO:0008332	low voltage-gated calcium channel activity(GO:0008332)
5.4	27.1	GO:0070404	NADH binding(GO:0070404)
5.4	21.6	GO:0016416	carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416)
5.3	42.4	GO:0005007	fibroblast growth factor-activated receptor activity(GO:0005007)
4.2	25.2	GO:0031749	D2 dopamine receptor binding(GO:0031749)
3.6	18.1	GO:0050833	pyruvate transmembrane transporter activity(GO:0050833)
3.6	10.8	GO:0008475	procollagen-lysine 5-dioxygenase activity(GO:0008475) procollagen glucosyltransferase activity(GO:0033823)
3.4	10.3	GO:0072320	volume-sensitive chloride channel activity(GO:0072320)
3.4	10.3	GO:0061628	H3K27me3 modified histone binding(GO:0061628)
2.7	19.2	GO:0005432	calcium:sodium antiporter activity(GO:0005432)
2.6	15.9	GO:0008294	calcium- and calmodulin-responsive adenylate cyclase activity(GO:0008294)
2.6	7.8	GO:0070698	type I activin receptor binding(GO:0070698)
2.5	7.5	GO:0003845	11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845)
2.3	6.9	GO:0033906	hyaluronoglucuronidase activity(GO:0033906)
2.2	17.9	GO:0017169	CDP-alcohol phosphatidyltransferase activity(GO:0017169)
2.1	10.7	GO:0008503	benzodiazepine receptor activity(GO:0008503)
2.1	10.3	GO:0000213	tRNA-intron endonuclease activity(GO:0000213)
2.0	11.9	GO:0051430	corticotropin-releasing hormone receptor 1 binding(GO:0051430)
1.9	9.5	GO:0005250	A-type (transient outward) potassium channel activity(GO:0005250)
1.8	7.3	GO:0033149	FFAT motif binding(GO:0033149)
1.8	10.7	GO:0004308	exo-alpha-sialidase activity(GO:0004308) alpha-sialidase activity(GO:0016997)
1.7	10.3	GO:0005127	ciliary neurotrophic factor receptor binding(GO:0005127)
1.6	30.8	GO:0016594	glycine binding(GO:0016594)
1.6	16.2	GO:0005222	intracellular cAMP activated cation channel activity(GO:0005222)
1.5	5.9	GO:0004706	JUN kinase kinase kinase activity(GO:0004706)
1.3	20.0	GO:0004679	AMP-activated protein kinase activity(GO:0004679)
1.2	8.4	GO:0030160	GKAP/Homer scaffold activity(GO:0030160)
1.1	17.9	GO:0042813	Wnt-activated receptor activity(GO:0042813)
1.0	9.4	GO:0015280	ligand-gated sodium channel activity(GO:0015280)
1.0	3.1	GO:0004159	dihydrouracil dehydrogenase (NAD+) activity(GO:0004159) dihydropyrimidine dehydrogenase (NADP+) activity(GO:0017113)
1.0	9.8	GO:0015386	potassium:proton antiporter activity(GO:0015386)
0.9	6.3	GO:0004767	sphingomyelin phosphodiesterase activity(GO:0004767)
0.9	3.5	GO:0016802	adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.8	5.9	GO:0015277	kainate selective glutamate receptor activity(GO:0015277)
0.8	6.7	GO:0031545	peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.8	3.3	GO:0016415	octanoyltransferase activity(GO:0016415)
0.8	5.0	GO:0098519	nucleotide phosphatase activity, acting on free nucleotides(GO:0098519)
0.8	47.1	GO:0001786	phosphatidylserine binding(GO:0001786)
0.8	14.6	GO:0033549	MAP kinase phosphatase activity(GO:0033549)
0.8	7.9	GO:0070878	primary miRNA binding(GO:0070878)
0.8	3.1	GO:0008569	ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569)
0.6	5.4	GO:0043184	vascular endothelial growth factor receptor 2 binding(GO:0043184)
0.6	8.3	GO:0045295	gamma-catenin binding(GO:0045295)
0.6	20.9	GO:0030506	ankyrin binding(GO:0030506)
0.5	15.2	GO:0071855	neuropeptide receptor binding(GO:0071855)
0.5	19.9	GO:0035255	ionotropic glutamate receptor binding(GO:0035255)
0.5	30.8	GO:0005201	extracellular matrix structural constituent(GO:0005201)
0.5	13.1	GO:0005520	insulin-like growth factor binding(GO:0005520)
0.5	10.9	GO:0001871	pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.4	5.8	GO:0005528	macrolide binding(GO:0005527) FK506 binding(GO:0005528)
0.4	2.2	GO:0050309	glucose-6-phosphatase activity(GO:0004346) sugar-terminal-phosphatase activity(GO:0050309)
0.4	4.1	GO:0015193	L-proline transmembrane transporter activity(GO:0015193)
0.4	19.6	GO:0030507	spectrin binding(GO:0030507)
0.4	6.1	GO:0019206	nucleoside kinase activity(GO:0019206)
0.4	2.0	GO:0043532	angiostatin binding(GO:0043532)
0.4	4.9	GO:0008331	high voltage-gated calcium channel activity(GO:0008331)
0.4	19.0	GO:0048365	Rac GTPase binding(GO:0048365)
0.4	12.6	GO:0030742	GTP-dependent protein binding(GO:0030742)
0.4	11.8	GO:1990841	promoter-specific chromatin binding(GO:1990841)
0.3	12.9	GO:0051879	Hsp90 protein binding(GO:0051879)
0.3	7.0	GO:0005031	tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.3	9.0	GO:0008376	acetylgalactosaminyltransferase activity(GO:0008376)
0.3	2.6	GO:0046790	virion binding(GO:0046790)
0.3	0.9	GO:0004483	mRNA (nucleoside-2'-O-)-methyltransferase activity(GO:0004483)
0.3	17.3	GO:0004714	transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.3	19.5	GO:0019888	protein phosphatase regulator activity(GO:0019888)
0.3	8.7	GO:0005109	frizzled binding(GO:0005109)
0.3	6.9	GO:0017091	AU-rich element binding(GO:0017091)
0.3	16.9	GO:0009055	electron carrier activity(GO:0009055)
0.3	8.3	GO:0004623	phospholipase A2 activity(GO:0004623)
0.2	13.7	GO:0019003	GDP binding(GO:0019003)
0.2	4.6	GO:0005337	nucleoside transmembrane transporter activity(GO:0005337)
0.2	6.5	GO:0043539	protein serine/threonine kinase activator activity(GO:0043539)
0.2	14.8	GO:0003777	microtubule motor activity(GO:0003777)
0.2	22.3	GO:0005179	hormone activity(GO:0005179)
0.2	9.6	GO:0050840	extracellular matrix binding(GO:0050840)
0.2	0.7	GO:0016890	site-specific endodeoxyribonuclease activity, specific for altered base(GO:0016890)
0.2	4.5	GO:0070064	proline-rich region binding(GO:0070064)
0.1	1.5	GO:0008157	protein phosphatase 1 binding(GO:0008157)
0.1	2.2	GO:0034236	protein kinase A catalytic subunit binding(GO:0034236)
0.1	1.0	GO:0010861	thyroid hormone receptor activator activity(GO:0010861)
0.1	1.2	GO:0022820	potassium:chloride symporter activity(GO:0015379) potassium ion symporter activity(GO:0022820)
0.1	3.4	GO:0004521	endoribonuclease activity(GO:0004521)
0.1	0.6	GO:0015266	protein channel activity(GO:0015266)
0.1	10.3	GO:0008168	methyltransferase activity(GO:0008168)
0.0	9.5	GO:0004252	serine-type endopeptidase activity(GO:0004252)
0.0	1.0	GO:0005104	fibroblast growth factor receptor binding(GO:0005104)
0.0	0.2	GO:0005173	stem cell factor receptor binding(GO:0005173)
0.0	0.6	GO:0003950	NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0	6.7	GO:0033218	amide binding(GO:0033218)
0.0	2.3	GO:0005262	calcium channel activity(GO:0005262)
0.0	3.1	GO:0008514	organic anion transmembrane transporter activity(GO:0008514)
0.0	29.8	GO:0004930	G-protein coupled receptor activity(GO:0004930)
0.0	9.7	GO:0005509	calcium ion binding(GO:0005509)
0.0	4.6	GO:0003779	actin binding(GO:0003779)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.1	44.1	PID GLYPICAN 1PATHWAY	Glypican 1 network
1.0	25.2	PID IL8 CXCR1 PATHWAY	IL8- and CXCR1-mediated signaling events
0.9	11.3	PID TCR RAS PATHWAY	Ras signaling in the CD4+ TCR pathway
0.8	15.9	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.6	10.9	PID INTEGRIN5 PATHWAY	Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.4	21.6	PID HNF3B PATHWAY	FOXA2 and FOXA3 transcription factor networks
0.4	4.5	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
0.4	15.5	PID LIS1 PATHWAY	Lissencephaly gene (LIS1) in neuronal migration and development
0.4	9.9	PID P38 MKK3 6PATHWAY	p38 MAPK signaling pathway
0.4	7.9	PID P38 MK2 PATHWAY	p38 signaling mediated by MAPKAP kinases
0.3	20.0	PID VEGFR1 2 PATHWAY	Signaling events mediated by VEGFR1 and VEGFR2
0.3	6.7	PID HIF1A PATHWAY	Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.3	17.4	WNT SIGNALING	Genes related to Wnt-mediated signal transduction
0.3	5.4	PID BETA CATENIN DEG PATHWAY	Degradation of beta catenin
0.2	7.1	PID HDAC CLASSIII PATHWAY	Signaling events mediated by HDAC Class III
0.2	2.4	PID RET PATHWAY	Signaling events regulated by Ret tyrosine kinase
0.2	7.8	PID BMP PATHWAY	BMP receptor signaling
0.1	30.7	NABA ECM REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.1	6.3	PID CERAMIDE PATHWAY	Ceramide signaling pathway
0.1	5.3	PID HDAC CLASSI PATHWAY	Signaling events mediated by HDAC Class I
0.1	4.6	PID ERA GENOMIC PATHWAY	Validated nuclear estrogen receptor alpha network
0.1	3.2	PID NFAT TFPATHWAY	Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.1	2.8	PID RB 1PATHWAY	Regulation of retinoblastoma protein
0.0	2.8	PID BETA CATENIN NUC PATHWAY	Regulation of nuclear beta catenin signaling and target gene transcription
0.0	1.5	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.0	1.5	NABA COLLAGENS	Genes encoding collagen proteins
0.0	0.7	ST DIFFERENTIATION PATHWAY IN PC12 CELLS	Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.0	0.4	PID EPHB FWD PATHWAY	EPHB forward signaling
0.0	0.2	PID KIT PATHWAY	Signaling events mediated by Stem cell factor receptor (c-Kit)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
3.3	43.3	REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1	Genes involved in Signaling by activated point mutants of FGFR1
2.8	25.2	REACTOME GAP JUNCTION DEGRADATION	Genes involved in Gap junction degradation
2.2	20.0	REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK	Genes involved in Regulation of Rheb GTPase activity by AMPK
1.4	21.6	REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE	Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle
1.1	11.3	REACTOME RAF MAP KINASE CASCADE	Genes involved in RAF/MAP kinase cascade
1.1	15.9	REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY	Genes involved in Adenylate cyclase activating pathway
1.0	14.6	REACTOME ERKS ARE INACTIVATED	Genes involved in ERKs are inactivated
0.8	6.5	REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION	Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.8	34.5	REACTOME NCAM1 INTERACTIONS	Genes involved in NCAM1 interactions
0.8	19.2	REACTOME PLATELET CALCIUM HOMEOSTASIS	Genes involved in Platelet calcium homeostasis
0.7	17.9	REACTOME SYNTHESIS OF PC	Genes involved in Synthesis of PC
0.6	10.7	REACTOME GABA A RECEPTOR ACTIVATION	Genes involved in GABA A receptor activation
0.6	15.8	REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN	Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen
0.5	6.9	REACTOME HYALURONAN UPTAKE AND DEGRADATION	Genes involved in Hyaluronan uptake and degradation
0.5	14.5	REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS	Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
0.5	11.9	REACTOME PROSTACYCLIN SIGNALLING THROUGH PROSTACYCLIN RECEPTOR	Genes involved in Prostacyclin signalling through prostacyclin receptor
0.5	17.0	REACTOME GLYCOSPHINGOLIPID METABOLISM	Genes involved in Glycosphingolipid metabolism
0.4	9.0	REACTOME CHONDROITIN SULFATE BIOSYNTHESIS	Genes involved in Chondroitin sulfate biosynthesis
0.4	19.5	REACTOME MITOCHONDRIAL PROTEIN IMPORT	Genes involved in Mitochondrial Protein Import
0.4	6.1	REACTOME PURINE SALVAGE	Genes involved in Purine salvage
0.4	5.9	REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS	Genes involved in Ionotropic activity of Kainate Receptors
0.3	9.7	REACTOME ADHERENS JUNCTIONS INTERACTIONS	Genes involved in Adherens junctions interactions
0.3	7.8	REACTOME SIGNALING BY BMP	Genes involved in Signaling by BMP
0.3	8.3	REACTOME ACYL CHAIN REMODELLING OF PE	Genes involved in Acyl chain remodelling of PE
0.3	3.2	REACTOME CTNNB1 PHOSPHORYLATION CASCADE	Genes involved in Beta-catenin phosphorylation cascade
0.3	5.3	REACTOME GAP JUNCTION ASSEMBLY	Genes involved in Gap junction assembly
0.3	12.3	REACTOME COLLAGEN FORMATION	Genes involved in Collagen formation
0.3	7.3	REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION	Genes involved in Pre-NOTCH Transcription and Translation
0.3	6.8	REACTOME DCC MEDIATED ATTRACTIVE SIGNALING	Genes involved in DCC mediated attractive signaling
0.2	25.3	REACTOME POTASSIUM CHANNELS	Genes involved in Potassium Channels
0.2	3.1	REACTOME PYRIMIDINE CATABOLISM	Genes involved in Pyrimidine catabolism
0.2	17.4	REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS	Genes involved in Class B/2 (Secretin family receptors)
0.2	6.4	REACTOME INTERACTION BETWEEN L1 AND ANKYRINS	Genes involved in Interaction between L1 and Ankyrins
0.2	7.3	REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS	Genes involved in Sphingolipid de novo biosynthesis
0.2	4.1	REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS	Genes involved in Na+/Cl- dependent neurotransmitter transporters
0.1	10.9	REACTOME INTEGRIN CELL SURFACE INTERACTIONS	Genes involved in Integrin cell surface interactions
0.1	2.2	REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL	Genes involved in AKT phosphorylates targets in the cytosol
0.1	4.6	REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES	Genes involved in Transport of vitamins, nucleosides, and related molecules
0.1	0.7	REACTOME RETROGRADE NEUROTROPHIN SIGNALLING	Genes involved in Retrograde neurotrophin signalling
0.1	9.5	REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES	Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides
0.1	12.3	REACTOME TRANSMISSION ACROSS CHEMICAL SYNAPSES	Genes involved in Transmission across Chemical Synapses
0.1	0.5	REACTOME CTLA4 INHIBITORY SIGNALING	Genes involved in CTLA4 inhibitory signaling
0.1	1.5	REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS	Genes involved in Apoptotic cleavage of cellular proteins
0.1	0.8	REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GLP1	Genes involved in Synthesis, Secretion, and Inactivation of Glucagon-like Peptide-1 (GLP-1)
0.0	7.0	REACTOME SIGNALING BY RHO GTPASES	Genes involved in Signaling by Rho GTPases
0.0	3.1	REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES	Genes involved in Loss of Nlp from mitotic centrosomes