GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Zfp691 Links NCBI RGD Ensembl	ENSRNOG00000007398	zinc finger protein 691

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zfp691	rn6_v1_chr5_-_138222534_138222534	-0.34	4.2e-10	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr15_+_32811135 Show fit	61.37	ENSRNOT00000067689	AABR07017902.1 Links NCBI RGD Ensembl Show fit
chr11_-_37914983 Show fit	54.47	ENSRNOT00000039876	Mx1 Links NCBI RGD Ensembl Show fit	myxovirus (influenza virus) resistance 1
chr10_-_110232843 Show fit	46.72	ENSRNOT00000054934	Cd7 Links NCBI RGD Ensembl Show fit	Cd7 molecule
chr14_-_15258207 Show fit	46.23	ENSRNOT00000039383	Cxcl13 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 13
chr13_+_50164563 Show fit	45.85	ENSRNOT00000029533	Lax1 Links NCBI RGD Ensembl Show fit	lymphocyte transmembrane adaptor 1
chr6_-_138662365 Show fit	44.89	ENSRNOT00000066209 ENSRNOT00000084892	Ighm Links NCBI RGD Ensembl Show fit	immunoglobulin heavy constant mu
chr6_+_139486942 Show fit	42.66	ENSRNOT00000080320	AABR07065699.3 Links NCBI RGD Ensembl Show fit
chr6_-_138900915 Show fit	40.33	ENSRNOT00000075363	AABR07065656.3 Links NCBI RGD Ensembl Show fit
chr6_+_139486775 Show fit	39.95	ENSRNOT00000077771	AABR07065699.3 Links NCBI RGD Ensembl Show fit
chr10_-_31359699 Show fit	37.88	ENSRNOT00000081280	Cyfip2 Links NCBI RGD Ensembl Show fit	cytoplasmic FMR1 interacting protein 2
chr8_-_49308806 Show fit	37.78	ENSRNOT00000047291	Cd3e Links NCBI RGD Ensembl Show fit	CD3e molecule
chrX_-_71169038 Show fit	36.24	ENSRNOT00000005343	Il2rg Links NCBI RGD Ensembl Show fit	interleukin 2 receptor subunit gamma
chr6_+_139560028 Show fit	35.45	ENSRNOT00000072633	LOC100360581 Links NCBI RGD Ensembl Show fit	rCG58847-like
chr6_+_139428999 Show fit	34.47	ENSRNOT00000084482	AABR07065693.2 Links NCBI RGD Ensembl Show fit
chrX_-_71168612 Show fit	32.98	ENSRNOT00000075934	Il2rg Links NCBI RGD Ensembl Show fit	interleukin 2 receptor subunit gamma
chr11_+_71872830 Show fit	32.60	ENSRNOT00000050364	Nrros Links NCBI RGD Ensembl Show fit	negative regulator of reactive oxygen species
chr13_-_91981432 Show fit	31.35	ENSRNOT00000004637	AABR07021804.1 Links NCBI RGD Ensembl Show fit
chr7_+_125288081 Show fit	31.25	ENSRNOT00000085216	Parvg Links NCBI RGD Ensembl Show fit	parvin, gamma
chr15_-_29548400 Show fit	31.18	ENSRNOT00000078176	AABR07017639.2 Links NCBI RGD Ensembl Show fit
chr6_+_139293130 Show fit	30.98	ENSRNOT00000071714	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr6_-_138931262 Show fit	30.92	ENSRNOT00000078126 ENSRNOT00000042118	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr6_-_139004980 Show fit	28.14	ENSRNOT00000085427 ENSRNOT00000087351	AABR07065656.4 Links NCBI RGD Ensembl Show fit
chr8_+_133210473 Show fit	27.41	ENSRNOT00000082774	Ccr5 Links NCBI RGD Ensembl Show fit	chemokine (C-C motif) receptor 5
chr6_-_139660666 Show fit	26.44	ENSRNOT00000086098	AABR07065705.1 Links NCBI RGD Ensembl Show fit
chr6_-_139710905 Show fit	26.37	ENSRNOT00000077430	AABR07065705.2 Links NCBI RGD Ensembl Show fit
chr6_-_138954741 Show fit	24.80	ENSRNOT00000083278	AABR07065656.7 Links NCBI RGD Ensembl Show fit
chr6_+_139293294 Show fit	24.14	ENSRNOT00000050297 ENSRNOT00000081817	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr6_-_138954577 Show fit	24.08	ENSRNOT00000042728	AABR07065656.7 Links NCBI RGD Ensembl Show fit
chr8_-_22270647 Show fit	24.02	ENSRNOT00000028380	S1pr5 Links NCBI RGD Ensembl Show fit	sphingosine-1-phosphate receptor 5
chr10_-_90415070 Show fit	23.54	ENSRNOT00000055179	Itga2b Links NCBI RGD Ensembl Show fit	integrin subunit alpha 2b
chr10_-_67401836 Show fit	22.98	ENSRNOT00000073071	Crlf3 Links NCBI RGD Ensembl Show fit	cytokine receptor-like factor 3
chr11_+_60383431 Show fit	22.77	ENSRNOT00000093295	Cd200 Links NCBI RGD Ensembl Show fit	Cd200 molecule
chr13_-_26768708 Show fit	22.23	ENSRNOT00000092763	Bcl2 Links NCBI RGD Ensembl Show fit	BCL2, apoptosis regulator
chr1_-_133559975 Show fit	21.12	ENSRNOT00000046645	Mctp2 Links NCBI RGD Ensembl Show fit	multiple C2 and transmembrane domain containing 2
chr20_-_32232632 Show fit	21.04	ENSRNOT00000068184	Ddx21 Links NCBI RGD Ensembl Show fit	DExD-box helicase 21
chrX_+_1311121 Show fit	20.86	ENSRNOT00000038909	Cfp Links NCBI RGD Ensembl Show fit	complement factor properdin
chr1_+_215628785 Show fit	20.44	ENSRNOT00000054864	Lsp1 Links NCBI RGD Ensembl Show fit	lymphocyte-specific protein 1
chr10_-_13619935 Show fit	20.06	ENSRNOT00000064392	Ccnf Links NCBI RGD Ensembl Show fit	cyclin F
chr16_-_21362955 Show fit	19.72	ENSRNOT00000039607	Gmip Links NCBI RGD Ensembl Show fit	Gem-interacting protein
chr20_-_32139789 Show fit	19.45	ENSRNOT00000078140	Srgn Links NCBI RGD Ensembl Show fit	serglycin
chr14_-_14426437 Show fit	19.15	ENSRNOT00000068134	Anxa3 Links NCBI RGD Ensembl Show fit	annexin A3
chr8_+_132869712 Show fit	18.89	ENSRNOT00000008294	Cxcr6 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine receptor 6
chr6_-_139637187 Show fit	18.66	ENSRNOT00000089454	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr10_-_14613878 Show fit	18.56	ENSRNOT00000024072	Baiap3 Links NCBI RGD Ensembl Show fit	BAI1-associated protein 3
chr3_-_7202848 Show fit	18.17	ENSRNOT00000078428	Gfi1b Links NCBI RGD Ensembl Show fit	growth factor independent 1B transcriptional repressor
chr1_-_13050644 Show fit	18.17	ENSRNOT00000081259	Heca Links NCBI RGD Ensembl Show fit	hdc homolog, cell cycle regulator
chr3_-_7203420 Show fit	17.87	ENSRNOT00000015236	Gfi1b Links NCBI RGD Ensembl Show fit	growth factor independent 1B transcriptional repressor
chr3_+_2591331 Show fit	17.74	ENSRNOT00000017466	Sapcd2 Links NCBI RGD Ensembl Show fit	suppressor APC domain containing 2
chr7_-_60860990 Show fit	17.54	ENSRNOT00000009511	Rap1b Links NCBI RGD Ensembl Show fit	RAP1B, member of RAS oncogene family
chr6_-_139637354 Show fit	16.85	ENSRNOT00000072900	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr1_+_256955652 Show fit	15.90	ENSRNOT00000020411	Lgi1 Links NCBI RGD Ensembl Show fit	leucine-rich, glioma inactivated 1
chr14_+_5928737 Show fit	15.59	ENSRNOT00000071877 ENSRNOT00000040985 ENSRNOT00000074889	Mpa2l Links NCBI RGD Ensembl Show fit	macrophage activation 2 like
chr19_+_37600148 Show fit	14.96	ENSRNOT00000023853	Ctcf Links NCBI RGD Ensembl Show fit	CCCTC-binding factor
chr15_-_108326907 Show fit	14.90	ENSRNOT00000016848	Gpr18 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 18
chr19_-_9843673 Show fit	14.82	ENSRNOT00000015795	Gins3 Links NCBI RGD Ensembl Show fit	GINS complex subunit 3
chr6_-_138931429 Show fit	14.72	ENSRNOT00000090584	LOC100359993 Links NCBI RGD Ensembl Show fit	Ighg protein-like
chr1_-_227505267 Show fit	13.53	ENSRNOT00000028443	Ms4a7 Links NCBI RGD Ensembl Show fit	membrane spanning 4-domains A7
chr8_+_113105814 Show fit	13.28	ENSRNOT00000016749	Cpne4 Links NCBI RGD Ensembl Show fit	copine 4
chr5_+_47894530 Show fit	12.15	ENSRNOT00000076035 ENSRNOT00000090799	Mdn1 Links NCBI RGD Ensembl Show fit	midasin AAA ATPase 1
chr1_+_61553449 Show fit	10.25	ENSRNOT00000068694	RGD1565566 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L18a
chr7_+_143060597 Show fit	9.45	ENSRNOT00000087481	Krt7 Links NCBI RGD Ensembl Show fit	keratin 7
chr20_-_6548179 Show fit	8.83	ENSRNOT00000093711	Lemd2 Links NCBI RGD Ensembl Show fit	LEM domain containing 2
chr1_+_124983452 Show fit	8.60	ENSRNOT00000021262	Trpm1 Links NCBI RGD Ensembl Show fit	transient receptor potential cation channel, subfamily M, member 1
chr7_-_2961873 Show fit	8.15	ENSRNOT00000067441	Rps15-ps2 Links NCBI RGD Ensembl Show fit	ribosomal protein S15, pseudogene 2
chr16_+_61926586 Show fit	7.85	ENSRNOT00000058884	AABR07026059.1 Links NCBI RGD Ensembl Show fit
chr5_+_150725654 Show fit	7.78	ENSRNOT00000089852 ENSRNOT00000017740	Dnajc8 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C8
chr20_-_44255064 Show fit	7.76	ENSRNOT00000000735	Wisp3 Links NCBI RGD Ensembl Show fit	WNT1 inducible signaling pathway protein 3
chr12_+_13102019 Show fit	7.71	ENSRNOT00000092628	Rac1 Links NCBI RGD Ensembl Show fit	ras-related C3 botulinum toxin substrate 1
chr7_-_132984110 Show fit	7.53	ENSRNOT00000046626	Hmgb1-ps3 Links NCBI RGD Ensembl Show fit	high mobility group box 1, pseudogene 3
chr18_+_83777665 Show fit	7.48	ENSRNOT00000018682	Cbln2 Links NCBI RGD Ensembl Show fit	cerebellin 2 precursor
chr8_-_32431987 Show fit	7.30	ENSRNOT00000048460	RGD1563958 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L32
chr1_-_226630900 Show fit	7.23	ENSRNOT00000028092	Tmem138 Links NCBI RGD Ensembl Show fit	transmembrane protein 138
chr8_-_62386264 Show fit	7.19	ENSRNOT00000026165	Cplx3 Links NCBI RGD Ensembl Show fit	complexin 3
chrX_+_156429585 Show fit	6.91	ENSRNOT00000083203 ENSRNOT00000077322	Dnase1l1 Links NCBI RGD Ensembl Show fit	deoxyribonuclease 1-like 1
chr7_+_2458833 Show fit	6.89	ENSRNOT00000085092	Naca Links NCBI RGD Ensembl Show fit	nascent polypeptide-associated complex alpha subunit
chr1_-_170579616 Show fit	6.69	ENSRNOT00000076100	Rrp8 Links NCBI RGD Ensembl Show fit	ribosomal RNA processing 8, methyltransferase, homolog (yeast)
chr18_+_3705916 Show fit	6.55	ENSRNOT00000092846	Lama3 Links NCBI RGD Ensembl Show fit	laminin subunit alpha 3
chr6_+_91697109 Show fit	6.42	ENSRNOT00000006355	Arf6 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor 6
chr2_+_230186198 Show fit	6.33	ENSRNOT00000013049 ENSRNOT00000092954	Casp6 Links NCBI RGD Ensembl Show fit	caspase 6
chr1_-_94404211 Show fit	6.32	ENSRNOT00000019463	Uri1 Links NCBI RGD Ensembl Show fit	URI1, prefoldin-like chaperone
chr2_+_235341365 Show fit	6.26	ENSRNOT00000078017 ENSRNOT00000090658	LOC103689977 Links NCBI RGD Ensembl Show fit	caspase-6
chr1_-_199336451 Show fit	6.16	ENSRNOT00000035672	Prss53 Links NCBI RGD Ensembl Show fit	protease, serine, 53
chr5_-_173659675 Show fit	6.04	ENSRNOT00000027547	Klhl17 Links NCBI RGD Ensembl Show fit	kelch-like family member 17
chr11_-_71419223 Show fit	5.90	ENSRNOT00000002407	Tfrc Links NCBI RGD Ensembl Show fit	transferrin receptor
chr20_+_13680716 Show fit	5.31	ENSRNOT00000029458	LOC103694876 Links NCBI RGD Ensembl Show fit	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
chr5_+_147069616 Show fit	5.19	ENSRNOT00000072908	Trim62 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 62
chr4_+_140377565 Show fit	5.18	ENSRNOT00000082723	Itpr1 Links NCBI RGD Ensembl Show fit	inositol 1,4,5-trisphosphate receptor, type 1
chr8_-_133002201 Show fit	5.01	ENSRNOT00000008772	Ccr1 Links NCBI RGD Ensembl Show fit	C-C motif chemokine receptor 1
chr12_-_18274515 Show fit	4.99	ENSRNOT00000078075	LOC100361826 Links NCBI RGD Ensembl Show fit	sialophorin-like
chr3_-_176716146 Show fit	4.78	ENSRNOT00000017668	Srms Links NCBI RGD Ensembl Show fit	src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
chr16_-_20278814 Show fit	4.74	ENSRNOT00000025385	Map1s Links NCBI RGD Ensembl Show fit	microtubule-associated protein 1S
chr10_-_40994872 Show fit	4.72	ENSRNOT00000058640	RGD1563668 Links NCBI RGD Ensembl Show fit	similar to High mobility group protein 1 (HMG-1)
chr2_-_116374584 Show fit	4.57	ENSRNOT00000058919	Lrriq4 Links NCBI RGD Ensembl Show fit	leucine-rich repeats and IQ motif containing 4
chr9_+_94310921 Show fit	4.53	ENSRNOT00000026646	Eif4e2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 2
chr14_+_48740190 Show fit	4.44	ENSRNOT00000031638	Arap2 Links NCBI RGD Ensembl Show fit	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr9_-_65387169 Show fit	4.39	ENSRNOT00000051843	Orc2 Links NCBI RGD Ensembl Show fit	origin recognition complex, subunit 2
chr8_+_59111271 Show fit	4.26	ENSRNOT00000029413	Sh2d7 Links NCBI RGD Ensembl Show fit	SH2 domain containing 7
chr11_-_71619167 Show fit	4.24	ENSRNOT00000002396	Tm4sf19 Links NCBI RGD Ensembl Show fit	transmembrane 4 L six family member 19
chr5_+_135574172 Show fit	4.21	ENSRNOT00000023416	Tesk2 Links NCBI RGD Ensembl Show fit	testis-specific kinase 2
chr6_-_91490366 Show fit	4.05	ENSRNOT00000059187	Dnaaf2 Links NCBI RGD Ensembl Show fit	dynein, axonemal, assembly factor 2
chr7_-_28932641 Show fit	3.97	ENSRNOT00000059487	Dram1 Links NCBI RGD Ensembl Show fit	DNA-damage regulated autophagy modulator 1
chr3_-_161131812 Show fit	3.95	ENSRNOT00000067008	Wfdc11 Links NCBI RGD Ensembl Show fit	WAP four-disulfide core domain 11
chr8_-_22086095 Show fit	3.90	ENSRNOT00000068598	Zglp1 Links NCBI RGD Ensembl Show fit	zinc finger, GATA-like protein 1
chr12_-_46493203 Show fit	3.84	ENSRNOT00000057036	Cit Links NCBI RGD Ensembl Show fit	citron rho-interacting serine/threonine kinase
chr10_+_4719713 Show fit	3.70	ENSRNOT00000003412	Litaf Links NCBI RGD Ensembl Show fit	lipopolysaccharide-induced TNF factor
chr12_-_2170504 Show fit	3.44	ENSRNOT00000001309	Xab2 Links NCBI RGD Ensembl Show fit	XPA binding protein 2
chr4_+_147455533 Show fit	3.43	ENSRNOT00000081957	Tsen2 Links NCBI RGD Ensembl Show fit	tRNA splicing endonuclease subunit 2
chr2_+_187990242 Show fit	3.27	ENSRNOT00000092819	Arhgef2 Links NCBI RGD Ensembl Show fit	Rho/Rac guanine nucleotide exchange factor 2
chr13_-_55886679 Show fit	3.04	ENSRNOT00000066601	RGD1566099 Links NCBI RGD Ensembl Show fit	similar to novel protein
chr19_+_53723822 Show fit	3.01	ENSRNOT00000023478	RGD1304884 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 6430548M08
chr12_-_22472044 Show fit	2.86	ENSRNOT00000073356	Ufsp1 Links NCBI RGD Ensembl Show fit	UFM1-specific peptidase 1
chr1_-_213907144 Show fit	2.81	ENSRNOT00000054874	Sigirr Links NCBI RGD Ensembl Show fit	single Ig and TIR domain containing
chr9_-_10659357 Show fit	2.74	ENSRNOT00000091450	Kdm4b Links NCBI RGD Ensembl Show fit	lysine demethylase 4B
chr5_+_173340487 Show fit	2.73	ENSRNOT00000078306	Acap3 Links NCBI RGD Ensembl Show fit	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
chr20_-_43108198 Show fit	2.68	ENSRNOT00000000742	Hdac2 Links NCBI RGD Ensembl Show fit	histone deacetylase 2
chr13_+_68949665 Show fit	2.63	ENSRNOT00000003320	Fam129a Links NCBI RGD Ensembl Show fit	family with sequence similarity 129, member A
chr2_-_94903226 Show fit	2.60	ENSRNOT00000015194	AABR07009373.1 Links NCBI RGD Ensembl Show fit
chr20_+_11863082 Show fit	2.58	ENSRNOT00000001640	Fam207a Links NCBI RGD Ensembl Show fit	family with sequence similarity 207, member A
chr1_+_125367280 Show fit	2.27	ENSRNOT00000022049	Apba2 Links NCBI RGD Ensembl Show fit	amyloid beta precursor protein binding family A member 2
chr2_+_204886202 Show fit	2.26	ENSRNOT00000022200	Ngf Links NCBI RGD Ensembl Show fit	nerve growth factor
chrX_-_20807216 Show fit	2.23	ENSRNOT00000075757	Fam156b Links NCBI RGD Ensembl Show fit	family with sequence similarity 156, member B
chr6_-_98606109 Show fit	1.96	ENSRNOT00000006860	Wdr89 Links NCBI RGD Ensembl Show fit	WD repeat domain 89
chr4_+_78140483 Show fit	1.96	ENSRNOT00000048576	Zfp862 Links NCBI RGD Ensembl Show fit	zinc finger protein 862
chr4_+_168396775 Show fit	1.91	ENSRNOT00000008645	Borcs5 Links NCBI RGD Ensembl Show fit	BLOC-1 related complex subunit 5
chr9_+_94310469 Show fit	1.75	ENSRNOT00000065743	Eif4e2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 2
chr7_+_125940323 Show fit	1.72	ENSRNOT00000083830	Fam118a Links NCBI RGD Ensembl Show fit	family with sequence similarity 118, member A
chr12_-_11294058 Show fit	1.63	ENSRNOT00000001319	Arpc1a Links NCBI RGD Ensembl Show fit	actin related protein 2/3 complex, subunit 1A
chr3_+_80081647 Show fit	1.45	ENSRNOT00000057161	Arfgap2 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor GTPase activating protein 2
chr15_+_42808897 Show fit	1.43	ENSRNOT00000023475	Chrna2 Links NCBI RGD Ensembl Show fit	cholinergic receptor nicotinic alpha 2 subunit
chr15_+_19690194 Show fit	1.36	ENSRNOT00000010612	Styx Links NCBI RGD Ensembl Show fit	serine/threonine/tyrosine interacting protein
chr1_+_220840118 Show fit	1.24	ENSRNOT00000027927	Fibp Links NCBI RGD Ensembl Show fit	FGF1 intracellular binding protein
chr5_+_135882967 Show fit	1.18	ENSRNOT00000024841	Eif2b3 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2B, subunit 3 gamma
chr15_-_28835796 Show fit	1.06	ENSRNOT00000060439	Olr1641 Links NCBI RGD Ensembl Show fit	olfactory receptor 1641
chr9_+_92859988 Show fit	0.83	ENSRNOT00000085332	Cab39 Links NCBI RGD Ensembl Show fit	calcium binding protein 39
chr5_+_18901039 Show fit	0.80	ENSRNOT00000012066	Fam110b Links NCBI RGD Ensembl Show fit	family with sequence similarity 110, member B
chr10_+_63635219 Show fit	0.80	ENSRNOT00000081813 ENSRNOT00000005016	Prpf8 Links NCBI RGD Ensembl Show fit	pre-mRNA processing factor 8
chr2_-_188216482 Show fit	0.73	ENSRNOT00000027579	Msto1 Links NCBI RGD Ensembl Show fit	misato 1, mitochondrial distribution and morphology regulator
chr2_-_157066781 Show fit	0.73	ENSRNOT00000001187	LOC304239 Links NCBI RGD Ensembl Show fit	similar to RalA binding protein 1
chr3_+_4233111 Show fit	0.72	ENSRNOT00000042910	Lcn1 Links NCBI RGD Ensembl Show fit	lipocalin 1
chr11_+_30550141 Show fit	0.67	ENSRNOT00000002866	Hunk Links NCBI RGD Ensembl Show fit	hormonally upregulated Neu-associated kinase
chr3_+_63536166 Show fit	0.64	ENSRNOT00000016132	Plekha3 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing A3
chr3_-_22459257 Show fit	0.61	ENSRNOT00000091747	Dennd1a Links NCBI RGD Ensembl Show fit	DENN domain containing 1A
chrX_+_157854272 Show fit	0.55	ENSRNOT00000089777 ENSRNOT00000003145	Fam122b Links NCBI RGD Ensembl Show fit	family with sequence similarity 122B
chr11_-_28598179 Show fit	0.48	ENSRNOT00000070889	LOC100912272 Links NCBI RGD Ensembl Show fit	keratin-associated protein 26-1-like
chr13_+_49195325 Show fit	0.46	ENSRNOT00000004810	Dstyk Links NCBI RGD Ensembl Show fit	dual serine/threonine and tyrosine protein kinase
chr11_-_11214141 Show fit	0.43	ENSRNOT00000065748	Robo2 Links NCBI RGD Ensembl Show fit	roundabout guidance receptor 2
chr2_+_20431243 Show fit	0.25	ENSRNOT00000021857	Ssbp2 Links NCBI RGD Ensembl Show fit	single-stranded DNA binding protein 2
chr11_-_87403367 Show fit	0.03	ENSRNOT00000057751	Thap7 Links NCBI RGD Ensembl Show fit	THAP domain containing 7

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
11.6	46.2	GO:2001027	negative regulation of endothelial cell chemotaxis(GO:2001027)
9.4	37.8	GO:0002913	positive regulation of T cell anergy(GO:0002669) positive regulation of lymphocyte anergy(GO:0002913)
9.1	27.4	GO:2000464	positive regulation of astrocyte chemotaxis(GO:2000464)
7.4	22.2	GO:0019740	regulation of nitrogen utilization(GO:0006808) nitrogen utilization(GO:0019740) negative regulation of retinal cell programmed cell death(GO:0046671)
6.9	69.2	GO:0032831	regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation(GO:0032829) positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation(GO:0032831)
6.5	19.5	GO:0033364	mast cell secretory granule organization(GO:0033364)
6.1	54.5	GO:0003374	dynamin polymerization involved in membrane fission(GO:0003373) dynamin polymerization involved in mitochondrial fission(GO:0003374)
5.0	40.1	GO:0051388	positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388)
4.5	36.0	GO:0051572	negative regulation of histone H3-K4 methylation(GO:0051572)
3.5	17.5	GO:2000301	negative regulation of synaptic vesicle exocytosis(GO:2000301)
3.3	20.1	GO:0000320	re-entry into mitotic cell cycle(GO:0000320)
2.5	22.8	GO:0043031	negative regulation of macrophage activation(GO:0043031)
2.3	6.9	GO:1901227	negative regulation of transcription from RNA polymerase II promoter involved in heart development(GO:1901227)
1.9	15.0	GO:0016584	maintenance of DNA methylation(GO:0010216) nucleosome positioning(GO:0016584)
1.7	45.9	GO:0000188	inactivation of MAPK activity(GO:0000188)
1.6	24.0	GO:0003376	sphingosine-1-phosphate signaling pathway(GO:0003376)
1.5	7.7	GO:0032707	negative regulation of interleukin-23 production(GO:0032707)
1.4	14.9	GO:0043374	CD8-positive, alpha-beta T cell differentiation(GO:0043374)
1.3	6.3	GO:0072733	acute inflammatory response to non-antigenic stimulus(GO:0002525) response to staurosporine(GO:0072733) cellular response to staurosporine(GO:0072734)
1.2	19.1	GO:0043312	neutrophil degranulation(GO:0043312)
1.1	46.7	GO:0048873	homeostasis of number of cells within a tissue(GO:0048873)
0.9	2.8	GO:0045079	negative regulation of chemokine biosynthetic process(GO:0045079)
0.9	2.7	GO:0006344	maintenance of chromatin silencing(GO:0006344)
0.9	5.2	GO:0002433	immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096)
0.9	3.4	GO:0000379	tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.8	6.7	GO:0046015	regulation of transcription by glucose(GO:0046015)
0.8	3.3	GO:0071802	negative regulation of podosome assembly(GO:0071802)
0.8	8.8	GO:0044821	meiotic telomere tethering at nuclear periphery(GO:0044821) meiotic attachment of telomere to nuclear envelope(GO:0070197) chromosome attachment to the nuclear envelope(GO:0097240)
0.8	8.6	GO:0046548	retinal rod cell development(GO:0046548)
0.7	5.9	GO:0033572	transferrin transport(GO:0033572)
0.7	10.0	GO:0031498	chromatin disassembly(GO:0031498)
0.6	23.0	GO:1904894	positive regulation of JAK-STAT cascade(GO:0046427) positive regulation of STAT cascade(GO:1904894)
0.5	19.7	GO:0034260	negative regulation of GTPase activity(GO:0034260)
0.5	32.6	GO:0006801	superoxide metabolic process(GO:0006801)
0.5	21.0	GO:0010501	RNA secondary structure unwinding(GO:0010501) response to exogenous dsRNA(GO:0043330)
0.4	23.9	GO:0070098	chemokine-mediated signaling pathway(GO:0070098)
0.4	6.4	GO:0036010	protein localization to endosome(GO:0036010)
0.3	6.5	GO:0031581	hemidesmosome assembly(GO:0031581)
0.3	3.4	GO:0006283	transcription-coupled nucleotide-excision repair(GO:0006283)
0.3	2.7	GO:1900113	negative regulation of histone H3-K9 trimethylation(GO:1900113)
0.3	21.2	GO:0070527	platelet aggregation(GO:0070527)
0.3	31.3	GO:0031532	actin cytoskeleton reorganization(GO:0031532)
0.3	6.9	GO:0006308	DNA catabolic process(GO:0006308)
0.2	5.2	GO:0010719	negative regulation of epithelial to mesenchymal transition(GO:0010719)
0.2	3.8	GO:0050774	negative regulation of dendrite morphogenesis(GO:0050774)
0.2	4.1	GO:0001539	cilium or flagellum-dependent cell motility(GO:0001539) cilium-dependent cell motility(GO:0060285)
0.2	3.7	GO:0042347	negative regulation of NF-kappaB import into nucleus(GO:0042347)
0.1	0.6	GO:0032483	regulation of Rab protein signal transduction(GO:0032483)
0.1	7.2	GO:0046928	regulation of neurotransmitter secretion(GO:0046928)
0.1	15.9	GO:0030307	positive regulation of cell growth(GO:0030307)
0.1	0.8	GO:0000244	spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1	18.2	GO:0045930	negative regulation of mitotic cell cycle(GO:0045930)
0.1	7.5	GO:0051965	positive regulation of synapse assembly(GO:0051965)
0.1	4.8	GO:0038083	peptidyl-tyrosine autophosphorylation(GO:0038083)
0.1	3.9	GO:0048599	oocyte development(GO:0048599)
0.1	4.2	GO:0048041	cell-substrate adherens junction assembly(GO:0007045) focal adhesion assembly(GO:0048041)
0.1	6.3	GO:0010923	negative regulation of phosphatase activity(GO:0010923)
0.1	0.5	GO:0045743	positive regulation of fibroblast growth factor receptor signaling pathway(GO:0045743)
0.1	7.5	GO:0006413	translational initiation(GO:0006413)
0.1	1.6	GO:0034314	Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0	2.3	GO:0016079	synaptic vesicle exocytosis(GO:0016079)
0.0	1.4	GO:0007274	neuromuscular synaptic transmission(GO:0007274)
0.0	0.7	GO:0048311	mitochondrion distribution(GO:0048311)
0.0	1.9	GO:0032418	lysosome localization(GO:0032418)
0.0	1.4	GO:0006611	protein export from nucleus(GO:0006611)
0.0	7.2	GO:0043547	positive regulation of GTPase activity(GO:0043547)
0.0	4.6	GO:0006260	DNA replication(GO:0006260)
0.0	0.7	GO:0001895	retina homeostasis(GO:0001895)
0.0	2.6	GO:0001933	negative regulation of protein phosphorylation(GO:0001933)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.7	37.8	GO:0042105	alpha-beta T cell receptor complex(GO:0042105)
2.9	8.6	GO:0035838	growing cell tip(GO:0035838)
1.3	6.7	GO:0033553	rDNA heterochromatin(GO:0033553)
1.3	5.2	GO:0031088	platelet dense granule membrane(GO:0031088)
1.1	19.1	GO:0042581	specific granule(GO:0042581)
1.1	6.5	GO:0005608	laminin-3 complex(GO:0005608)
1.0	5.9	GO:1990712	HFE-transferrin receptor complex(GO:1990712)
0.7	19.5	GO:0042629	mast cell granule(GO:0042629)
0.7	3.4	GO:0000214	tRNA-intron endonuclease complex(GO:0000214)
0.7	23.5	GO:0008305	integrin complex(GO:0008305)
0.6	7.7	GO:0060091	kinocilium(GO:0060091)
0.5	4.4	GO:0005664	origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.5	1.9	GO:0098574	cytoplasmic side of lysosomal membrane(GO:0098574)
0.5	8.8	GO:0005639	integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229)
0.4	2.7	GO:0090571	RNA polymerase II transcription repressor complex(GO:0090571)
0.4	6.4	GO:0031527	filopodium membrane(GO:0031527)
0.4	6.3	GO:0005845	mRNA cap binding complex(GO:0005845)
0.3	6.3	GO:0005665	DNA-directed RNA polymerase II, core complex(GO:0005665)
0.3	36.0	GO:0016363	nuclear matrix(GO:0016363)
0.3	91.5	GO:0009897	external side of plasma membrane(GO:0009897)
0.3	1.6	GO:0036194	muscle cell projection(GO:0036194) muscle cell projection membrane(GO:0036195)
0.2	16.6	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)
0.2	5.3	GO:0090544	BAF-type complex(GO:0090544)
0.2	1.2	GO:0005851	eukaryotic translation initiation factor 2B complex(GO:0005851)
0.2	14.6	GO:0005811	lipid particle(GO:0005811)
0.2	2.3	GO:0005796	Golgi lumen(GO:0005796)
0.2	6.0	GO:0032839	dendrite cytoplasm(GO:0032839)
0.2	2.7	GO:0031618	nuclear pericentric heterochromatin(GO:0031618)
0.2	7.8	GO:0045171	intercellular bridge(GO:0045171)
0.1	23.0	GO:0005741	mitochondrial outer membrane(GO:0005741)
0.1	9.4	GO:0045095	keratin filament(GO:0045095)
0.1	15.0	GO:0000775	chromosome, centromeric region(GO:0000775)
0.1	12.1	GO:0045111	intermediate filament cytoskeleton(GO:0045111)
0.1	34.6	GO:0098857	membrane raft(GO:0045121) membrane microdomain(GO:0098857)
0.1	62.9	GO:0048471	perinuclear region of cytoplasm(GO:0048471)
0.1	3.3	GO:0002102	podosome(GO:0002102)
0.1	4.2	GO:0071013	catalytic step 2 spliceosome(GO:0071013)
0.1	1.1	GO:0005892	acetylcholine-gated channel complex(GO:0005892)
0.1	4.6	GO:0034702	ion channel complex(GO:0034702)
0.0	3.8	GO:0031985	Golgi cisterna(GO:0031985)
0.0	14.0	GO:0030659	cytoplasmic vesicle membrane(GO:0030659)
0.0	4.8	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane(GO:0031234)
0.0	9.5	GO:0098793	presynapse(GO:0098793)
0.0	10.9	GO:0005774	vacuolar membrane(GO:0005774)
0.0	4.0	GO:0000323	lytic vacuole(GO:0000323) lysosome(GO:0005764)
0.0	10.6	GO:0031012	extracellular matrix(GO:0031012)
0.0	60.0	GO:0005654	nucleoplasm(GO:0005654)
0.0	34.5	GO:0044421	extracellular region part(GO:0044421)
0.0	9.0	GO:0005887	integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
15.4	46.2	GO:0031735	CCR10 chemokine receptor binding(GO:0031735)
11.5	69.2	GO:0019976	interleukin-2 binding(GO:0019976)
10.8	32.4	GO:0071791	chemokine (C-C motif) ligand 5 binding(GO:0071791)
3.9	23.5	GO:0070051	fibrinogen binding(GO:0070051)
3.8	19.1	GO:0019834	phospholipase A2 inhibitor activity(GO:0019834)
3.7	22.2	GO:0051434	BH3 domain binding(GO:0051434)
3.0	21.0	GO:0097322	7SK snRNA binding(GO:0097322)
2.4	24.0	GO:0038036	sphingosine-1-phosphate receptor activity(GO:0038036)
2.4	18.9	GO:0019958	C-X-C chemokine binding(GO:0019958)
2.0	6.0	GO:0031208	POZ domain binding(GO:0031208)
1.3	5.2	GO:0005220	inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity(GO:0005220)
1.0	45.9	GO:0042169	SH2 domain binding(GO:0042169)
0.9	2.7	GO:0035851	Krueppel-associated box domain binding(GO:0035851)
0.9	7.7	GO:0051022	Rho GDP-dissociation inhibitor binding(GO:0051022)
0.7	3.4	GO:0000213	tRNA-intron endonuclease activity(GO:0000213)
0.7	5.9	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.6	2.3	GO:0005163	nerve growth factor receptor binding(GO:0005163)
0.5	6.3	GO:0097200	cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200)
0.4	6.4	GO:0031996	thioesterase binding(GO:0031996)
0.4	4.6	GO:0005225	volume-sensitive anion channel activity(GO:0005225)
0.3	21.1	GO:0005544	calcium-dependent phospholipid binding(GO:0005544)
0.3	4.4	GO:0003688	DNA replication origin binding(GO:0003688)
0.3	2.7	GO:0032454	histone demethylase activity (H3-K9 specific)(GO:0032454)
0.3	86.3	GO:0003924	GTPase activity(GO:0003924)
0.3	38.4	GO:0017124	SH3 domain binding(GO:0017124)
0.3	7.8	GO:0005520	insulin-like growth factor binding(GO:0005520)
0.3	6.9	GO:0017025	TBP-class protein binding(GO:0017025)
0.3	39.9	GO:0001085	RNA polymerase II transcription factor binding(GO:0001085)
0.2	19.5	GO:0005518	collagen binding(GO:0005518)
0.2	6.3	GO:0001106	RNA polymerase II transcription corepressor activity(GO:0001106)
0.2	7.2	GO:0005326	neurotransmitter transporter activity(GO:0005326)
0.2	20.1	GO:0031490	chromatin DNA binding(GO:0031490)
0.2	11.6	GO:0004536	deoxyribonuclease activity(GO:0004536)
0.1	8.9	GO:0035064	methylated histone binding(GO:0035064)
0.1	3.7	GO:0050699	WW domain binding(GO:0050699)
0.1	7.5	GO:0003743	translation initiation factor activity(GO:0003743)
0.1	4.7	GO:0004712	protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.1	28.3	GO:0005096	GTPase activator activity(GO:0005096)
0.1	4.8	GO:0004715	non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1	0.8	GO:0017070	U6 snRNA binding(GO:0017070)
0.1	1.8	GO:0030676	Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.1	0.7	GO:0031404	chloride ion binding(GO:0031404)
0.1	1.4	GO:0042166	acetylcholine binding(GO:0042166)
0.1	6.3	GO:0004197	cysteine-type endopeptidase activity(GO:0004197)
0.1	8.3	GO:0005262	calcium channel activity(GO:0005262)
0.1	2.3	GO:0001540	beta-amyloid binding(GO:0001540)
0.1	3.8	GO:0097110	scaffold protein binding(GO:0097110)
0.1	1.2	GO:0017134	fibroblast growth factor binding(GO:0017134)
0.0	21.8	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.0	2.9	GO:0019783	ubiquitin-like protein-specific protease activity(GO:0019783)
0.0	0.8	GO:0043539	protein serine/threonine kinase activator activity(GO:0043539)
0.0	0.6	GO:0005545	1-phosphatidylinositol binding(GO:0005545)
0.0	1.4	GO:0008138	protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0	9.5	GO:0050839	cell adhesion molecule binding(GO:0050839)
0.0	2.9	GO:0004252	serine-type endopeptidase activity(GO:0004252)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.0	69.2	ST INTERLEUKIN 4 PATHWAY	Interleukin 4 (IL-4) Pathway
2.0	22.2	SA FAS SIGNALING	The TNF-type receptor Fas induces apoptosis on ligand binding.
1.6	24.0	PID S1P S1P4 PATHWAY	S1P4 pathway
1.3	69.5	PID ECADHERIN NASCENT AJ PATHWAY	E-cadherin signaling in the nascent adherens junction
1.3	46.2	PID CXCR3 PATHWAY	CXCR3-mediated signaling events
1.1	65.2	PID IL12 2PATHWAY	IL12-mediated signaling events
1.0	23.5	PID INTEGRIN CS PATHWAY	Integrin family cell surface interactions
0.9	20.4	PID P38 MK2 PATHWAY	p38 signaling mediated by MAPKAP kinases
0.7	31.3	PID ILK PATHWAY	Integrin-linked kinase signaling
0.7	46.7	ST FAS SIGNALING PATHWAY	Fas Signaling Pathway
0.5	19.5	NABA PROTEOGLYCANS	Genes encoding proteoglycans
0.4	6.5	PID INTEGRIN4 PATHWAY	Alpha6 beta4 integrin-ligand interactions
0.3	6.3	PID HIV NEF PATHWAY	HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.3	5.2	ST GAQ PATHWAY	G alpha q Pathway
0.3	2.3	SA TRKA RECEPTOR	The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth.
0.1	4.4	PID ARF6 PATHWAY	Arf6 signaling events
0.1	3.3	PID REELIN PATHWAY	Reelin signaling pathway
0.1	19.1	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.1	5.9	PID HNF3B PATHWAY	FOXA2 and FOXA3 transcription factor networks
0.1	3.8	PID RHOA PATHWAY	RhoA signaling pathway
0.1	30.5	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.1	13.6	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins
0.1	2.7	PID HEDGEHOG GLI PATHWAY	Hedgehog signaling events mediated by Gli proteins
0.0	0.8	PID LKB1 PATHWAY	LKB1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.5	27.4	REACTOME BINDING AND ENTRY OF HIV VIRION	Genes involved in Binding and entry of HIV virion
5.4	37.8	REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE	Genes involved in Translocation of ZAP-70 to Immunological synapse
4.6	69.2	REACTOME IL 7 SIGNALING	Genes involved in Interleukin-7 signaling
2.3	41.1	REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS	Genes involved in p130Cas linkage to MAPK signaling for integrins
1.5	70.1	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
1.2	22.2	REACTOME INFLAMMASOMES	Genes involved in Inflammasomes
0.9	54.5	REACTOME INTERFERON ALPHA BETA SIGNALING	Genes involved in Interferon alpha/beta signaling
0.5	7.7	REACTOME DSCAM INTERACTIONS	Genes involved in DSCAM interactions
0.4	4.4	REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION	Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.2	19.5	REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2	Genes involved in Response to elevated platelet cytosolic Ca2+
0.2	6.3	REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS	Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
0.2	5.9	REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING	Genes involved in Transferrin endocytosis and recycling
0.2	2.3	REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL	Genes involved in NF-kB is activated and signals survival
0.2	26.2	REACTOME SIGNALING BY RHO GTPASES	Genes involved in Signaling by Rho GTPases
0.1	1.4	REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS	Genes involved in Presynaptic nicotinic acetylcholine receptors
0.1	3.4	REACTOME FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX	Genes involved in Formation of transcription-coupled NER (TC-NER) repair complex
0.1	6.3	REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES	Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1	8.6	REACTOME MRNA SPLICING	Genes involved in mRNA Splicing
0.1	0.8	REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1	Genes involved in Regulation of AMPK activity via LKB1
0.1	2.7	REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION	Genes involved in NOTCH1 Intracellular Domain Regulates Transcription
0.0	2.8	REACTOME MYD88 MAL CASCADE INITIATED ON PLASMA MEMBRANE	Genes involved in MyD88:Mal cascade initiated on plasma membrane
0.0	2.5	REACTOME G ALPHA I SIGNALLING EVENTS	Genes involved in G alpha (i) signalling events