Results for BAS1
Z-value: 0.83
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Transcription factors associated with BAS1
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
BAS1
|
S000001807 | Myb-related transcription factor |
Activity-expression correlation:
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| YMR096W Show fit | 6.93 |
Protein involved in vitamin B6 biosynthesis; member of a stationary phase-induced gene family; coregulated with SNO1; interacts with Sno1p and with Yhr198p, perhaps as a multiprotein complex containing other Snz and Sno proteins |
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| YKL217W Show fit | 6.20 |
Lactate transporter, required for uptake of lactate and pyruvate; phosphorylated; expression is derepressed by transcriptional activator Cat8p during respiratory growth, and repressed in the presence of glucose, fructose, and mannose |
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| YIL057C Show fit | 5.01 |
Putative protein of unknown function; expression induced under carbon limitation and repressed under high glucose |
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| YMR095C Show fit | 4.39 |
Protein of unconfirmed function, involved in pyridoxine metabolism; expression is induced during stationary phase; forms a putative glutamine amidotransferase complex with Snz1p, with Sno1p serving as the glutaminase |
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| YBR296C Show fit | 3.65 |
Na+/Pi cotransporter, active in early growth phase; similar to phosphate transporters of Neurospora crassa; transcription regulated by inorganic phosphate concentrations and Pho4p |
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| YJR078W Show fit | 3.60 |
Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p and Aft2p |
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| YLR356W Show fit | 3.25 |
Putative protein of unknown function with similarity to SCM4; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR356W is not an essential gene |
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| YLR174W Show fit | 2.95 |
Cytosolic NADP-specific isocitrate dehydrogenase, catalyzes oxidation of isocitrate to alpha-ketoglutarate; levels are elevated during growth on non-fermentable carbon sources and reduced during growth on glucose |
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| YMR206W Show fit | 2.92 |
Putative protein of unknown function; YMR206W is not an essential gene |
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| YDL222C Show fit | 2.80 |
Integral membrane protein localized to mitochondria (untagged protein) and eisosomes, immobile patches at the cortex associated with endocytosis; sporulation and sphingolipid content are altered in mutants; has homologs SUR7 and YNL194C |
Network of associatons between targets according to the STRING database.
First level regulatory network of BAS1
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.6 | 12.9 | GO:0042816 | pyridoxine metabolic process(GO:0008614) pyridoxine biosynthetic process(GO:0008615) vitamin B6 metabolic process(GO:0042816) vitamin B6 biosynthetic process(GO:0042819) |
| 1.6 | 6.3 | GO:0006848 | pyruvate transport(GO:0006848) |
| 0.4 | 4.3 | GO:0006817 | phosphate ion transport(GO:0006817) |
| 0.8 | 4.2 | GO:0034354 | 'de novo' NAD biosynthetic process from tryptophan(GO:0034354) 'de novo' NAD biosynthetic process(GO:0034627) |
| 0.0 | 3.8 | GO:0048468 | ascospore formation(GO:0030437) cell development(GO:0048468) |
| 0.9 | 3.7 | GO:0006546 | glycine catabolic process(GO:0006546) |
| 0.6 | 3.1 | GO:0006102 | isocitrate metabolic process(GO:0006102) |
| 0.4 | 3.0 | GO:0051180 | vitamin transport(GO:0051180) |
| 0.9 | 2.8 | GO:0006577 | amino-acid betaine metabolic process(GO:0006577) carnitine metabolic process(GO:0009437) |
| 0.1 | 2.7 | GO:0009060 | aerobic respiration(GO:0009060) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 13.2 | GO:0005886 | plasma membrane(GO:0005886) |
| 0.9 | 3.7 | GO:0005960 | glycine cleavage complex(GO:0005960) |
| 0.5 | 2.4 | GO:0045239 | tricarboxylic acid cycle enzyme complex(GO:0045239) |
| 0.0 | 2.1 | GO:0000323 | storage vacuole(GO:0000322) lytic vacuole(GO:0000323) fungal-type vacuole(GO:0000324) |
| 0.0 | 2.0 | GO:0009277 | fungal-type cell wall(GO:0009277) |
| 0.1 | 1.7 | GO:0031305 | integral component of mitochondrial inner membrane(GO:0031305) |
| 0.5 | 1.6 | GO:0045265 | mitochondrial proton-transporting ATP synthase, stator stalk(GO:0000274) proton-transporting ATP synthase, stator stalk(GO:0045265) |
| 0.0 | 1.5 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
| 0.4 | 1.2 | GO:0000111 | nucleotide-excision repair factor 2 complex(GO:0000111) |
| 0.1 | 1.1 | GO:0031307 | intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 11.2 | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811) |
| 1.3 | 6.6 | GO:0015295 | solute:proton symporter activity(GO:0015295) |
| 1.1 | 5.5 | GO:0005315 | inorganic phosphate transmembrane transporter activity(GO:0005315) |
| 0.9 | 3.7 | GO:0004375 | glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642) |
| 0.5 | 3.6 | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen(GO:0016701) oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702) |
| 0.5 | 3.2 | GO:0019238 | cyclohydrolase activity(GO:0019238) |
| 0.1 | 3.2 | GO:0001228 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228) |
| 1.0 | 3.0 | GO:0004450 | isocitrate dehydrogenase (NADP+) activity(GO:0004450) |
| 0.2 | 2.9 | GO:0015578 | fructose transmembrane transporter activity(GO:0005353) mannose transmembrane transporter activity(GO:0015578) |
| 0.9 | 2.8 | GO:0004092 | carnitine O-acetyltransferase activity(GO:0004092) carnitine O-acyltransferase activity(GO:0016406) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 16.1 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
| 0.2 | 1.2 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
| 0.5 | 0.5 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
| 0.2 | 0.5 | PID IL4 2PATHWAY | IL4-mediated signaling events |
| 0.1 | 0.3 | PID ATM PATHWAY | ATM pathway |
| 0.1 | 0.2 | PID EPHA2 FWD PATHWAY | EPHA2 forward signaling |
| 0.0 | 0.1 | PID FANCONI PATHWAY | Fanconi anemia pathway |
| 0.0 | 0.0 | PID CMYB PATHWAY | C-MYB transcription factor network |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 16.0 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
| 0.4 | 1.2 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
| 0.1 | 0.5 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
| 0.1 | 0.3 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |
| 0.1 | 0.2 | REACTOME APOPTOTIC EXECUTION PHASE | Genes involved in Apoptotic execution phase |
| 0.0 | 0.2 | REACTOME PHOSPHORYLATION OF THE APC C | Genes involved in Phosphorylation of the APC/C |