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avrg: GSE58827: Dynamics of the Mouse Liver

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Results for Sox13

Z-value: 0.32

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Transcription factors associated with Sox13

Gene Symbol Gene ID Gene Info
Sox13
ENSMUSG00000070643.12 Sox13

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Sox13mm39_v1_chr1_-_133352115_1333521380.537.9e-04Click!

Activity profile of Sox13 motif

Sorted Z-values of Sox13 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of Sox13

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr11_-_99328969 1.87 ENSMUST00000017743.3
Krt20
keratin 20
chr19_+_44282113 1.45 ENSMUST00000026221.7
Scd2
stearoyl-Coenzyme A desaturase 2
chr7_+_121818692 0.65 ENSMUST00000033152.5
Chp2
calcineurin-like EF hand protein 2
chr1_+_172327812 0.53 ENSMUST00000192460.2
Tagln2
transgelin 2
chr5_+_146769700 0.44 ENSMUST00000035983.12
Rpl21
ribosomal protein L21
chr6_-_87312743 0.44 ENSMUST00000042025.12
ENSMUST00000205033.2
Antxr1
anthrax toxin receptor 1
chr18_-_6516089 0.39 ENSMUST00000115870.9
Epc1
enhancer of polycomb homolog 1
chr8_+_108271643 0.39 ENSMUST00000212543.2
Wwp2
WW domain containing E3 ubiquitin protein ligase 2
chr4_+_103000248 0.30 ENSMUST00000106855.2
Mier1
MEIR1 treanscription regulator
chr9_-_57673128 0.25 ENSMUST00000065330.8
Clk3
CDC-like kinase 3
chr18_-_43610829 0.25 ENSMUST00000057110.11
Eif3j2
eukaryotic translation initiation factor 3, subunit J2
chr3_-_75177378 0.24 ENSMUST00000039047.5
Serpini2
serine (or cysteine) peptidase inhibitor, clade I, member 2
chr11_+_29668563 0.23 ENSMUST00000060992.6
Rtn4
reticulon 4
chr15_+_6416079 0.22 ENSMUST00000080880.12
Dab2
disabled 2, mitogen-responsive phosphoprotein
chr2_+_4886298 0.08 ENSMUST00000027973.14
Sephs1
selenophosphate synthetase 1
chr19_+_41471067 0.06 ENSMUST00000067795.13
Lcor
ligand dependent nuclear receptor corepressor
chr7_-_84328553 0.06 ENSMUST00000069537.3
ENSMUST00000207865.2
ENSMUST00000178385.9
ENSMUST00000208782.2
Zfand6
zinc finger, AN1-type domain 6
chr13_-_63712349 0.05 ENSMUST00000192155.6
Ptch1
patched 1
chr1_+_39940043 0.03 ENSMUST00000168431.7
ENSMUST00000163854.9
Map4k4
mitogen-activated protein kinase kinase kinase kinase 4
chr6_-_87312681 0.03 ENSMUST00000204805.3
Antxr1
anthrax toxin receptor 1
chr14_-_121935829 0.03 ENSMUST00000040700.9
ENSMUST00000212181.2
Dock9
dedicator of cytokinesis 9
chrX_+_132751729 0.02 ENSMUST00000033602.9
Tnmd
tenomodulin
chr8_-_62576140 0.01 ENSMUST00000034052.14
ENSMUST00000034054.9
Anxa10
annexin A10
chr6_-_122317457 0.00 ENSMUST00000160843.8
Phc1
polyhomeotic 1
chr19_+_41471395 0.00 ENSMUST00000237208.2
ENSMUST00000238398.2
Lcor
ligand dependent nuclear receptor corepressor

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.4 GO:1903964 monounsaturated fatty acid metabolic process(GO:1903964) monounsaturated fatty acid biosynthetic process(GO:1903966)
0.1 0.5 GO:1903054 negative regulation of extracellular matrix organization(GO:1903054)
0.1 1.9 GO:0045109 intermediate filament organization(GO:0045109)
0.0 0.2 GO:0035026 leading edge cell differentiation(GO:0035026)
0.0 0.6 GO:0070886 positive regulation of calcineurin-NFAT signaling cascade(GO:0070886)
0.0 0.2 GO:0071787 endoplasmic reticulum tubular network assembly(GO:0071787)
0.0 0.3 GO:0031937 positive regulation of chromatin silencing(GO:0031937)
0.0 0.4 GO:0043968 histone H2A acetylation(GO:0043968)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0032777 Piccolo NuA4 histone acetyltransferase complex(GO:0032777)
0.0 0.2 GO:0070022 transforming growth factor beta receptor homodimeric complex(GO:0070022)
0.0 0.5 GO:0031258 lamellipodium membrane(GO:0031258)
0.0 1.9 GO:0005882 intermediate filament(GO:0005882)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.4 GO:0032896 palmitoyl-CoA 9-desaturase activity(GO:0032896)
0.0 0.1 GO:0016781 selenide, water dikinase activity(GO:0004756) phosphotransferase activity, paired acceptors(GO:0016781)
0.0 0.2 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 PID ANTHRAX PATHWAY Cellular roles of Anthrax toxin

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME GAP JUNCTION DEGRADATION Genes involved in Gap junction degradation