mm39_v1_chr17_-_28779678_28779740	3.28153	Hoxd1	ENSMUST00000114785.3|Clps|ENSMUSG00000024225.6|colipase, pancreatic	ENSMUST00000025062.5|Clps|ENSMUSG00000024225.6|colipase, pancreatic
mm39_v1_chr2_-_32277773_32277809	3.15672	Hoxd1	ENSMUST00000050785.14|Lcn2|ENSMUSG00000026822.15|lipocalin 2
mm39_v1_chr2_-_32278245_32278268	3.08457	Hoxd1	ENSMUST00000192241.2|Lcn2|ENSMUSG00000026822.15|lipocalin 2
mm39_v1_chr7_-_6733411_6733429	2.85125	Hoxd1	ENSMUST00000239104.2|Peg3|ENSMUSG00000002265.18|paternally expressed 3	ENSMUST00000051209.11|Peg3|ENSMUSG00000002265.18|paternally expressed 3
mm39_v1_chr19_-_39875192_39875243	2.00982	Hoxd1	ENSMUST00000168838.3|Cyp2c69|ENSMUSG00000092008.3|cytochrome P450, family 2, subfamily c, polypeptide 69
mm39_v1_chr19_-_7943365_7943401	1.93036	Hoxd1	ENSMUST00000182102.8|Slc22a27|ENSMUSG00000067656.14|solute carrier family 22, member 27	ENSMUST00000075619.5|Slc22a27|ENSMUSG00000067656.14|solute carrier family 22, member 27
mm39_v1_chr12_-_114443071_114443116	1.38721	Hoxd1	ENSMUST00000103492.2|Ighv10-1|ENSMUSG00000095981.2|immunoglobulin heavy variable 10-1
mm39_v1_chr9_+_118892497_118892560	1.34464	Hoxd1	ENSMUST00000141185.8|Vill|ENSMUSG00000038775.15|villin-like	ENSMUST00000126251.8|Vill|ENSMUSG00000038775.15|villin-like	ENSMUST00000136561.2|Vill|ENSMUSG00000038775.15|villin-like
mm39_v1_chr9_-_20871081_20871184	1.26456	Hoxd1	ENSMUST00000177754.9|Dnmt1|ENSMUSG00000004099.17|DNA methyltransferase (cytosine-5) 1
mm39_v1_chr4_-_131802561_131802603	1.17479	Hoxd1	ENSMUST00000105970.8|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1	ENSMUST00000105975.8|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1
mm39_v1_chr6_+_72074545_72074617	1.15217	Hoxd1	ENSMUST00000069994.11|St3gal5|ENSMUSG00000056091.13|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	ENSMUST00000114112.4|St3gal5|ENSMUSG00000056091.13|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm39_v1_chr7_+_78922947_78922973	1.13255	Hoxd1	ENSMUST00000037315.13|Abhd2|ENSMUSG00000039202.13|abhydrolase domain containing 2
mm39_v1_chr19_+_58748132_58748177	1.11982	Hoxd1	ENSMUST00000026081.5|Pnliprp2|ENSMUSG00000025091.5|pancreatic lipase-related protein 2
mm39_v1_chr6_-_69282389_69282389	1.09512	Hoxd1	ENSMUST00000103350.3|Igkv4-68|ENSMUSG00000076549.3|immunoglobulin kappa variable 4-68
mm39_v1_chr2_-_172212426_172212462	1.09317	Hoxd1	ENSMUST00000109139.8|Aurka|ENSMUSG00000027496.16|aurora kinase A	ENSMUST00000028997.8|Aurka|ENSMUSG00000027496.16|aurora kinase A	ENSMUST00000109140.10|Aurka|ENSMUSG00000027496.16|aurora kinase A
mm39_v1_chrX_-_56384089_56384140	1.09239	Hoxd1	ENSMUST00000033468.11|Arhgef6|ENSMUSG00000031133.13|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm39_v1_chr19_+_3373285_3373356	1.05316	Hoxd1	ENSMUST00000025835.6|Cpt1a|ENSMUSG00000024900.6|carnitine palmitoyltransferase 1a, liver
mm39_v1_chr14_+_19801333_19801360	1.04331	Hoxd1	ENSMUST00000022340.5|Nid2|ENSMUSG00000021806.5|nidogen 2
mm39_v1_chr3_-_129834788_129834855	1.03362	Hoxd1	ENSMUST00000168644.3|Sec24b|ENSMUSG00000001052.16|Sec24 related gene family, member B (S. cerevisiae)
mm39_v1_chr4_-_131802606_131802652	0.996613	Hoxd1	ENSMUST00000146021.8|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1
mm39_v1_chr4_+_140427799_140427855	0.901185	Hoxd1	ENSMUST00000071169.9|Rcc2|ENSMUSG00000040945.14|regulator of chromosome condensation 2
mm39_v1_chr12_+_112727089_112727151	0.849297	Hoxd1	ENSMUST00000063888.5|Pld4|ENSMUSG00000052160.8|phospholipase D family, member 4
mm39_v1_chr11_-_117716918_117716918	0.826364	Hoxd1	ENSMUST00000026661.4|Tk1|ENSMUSG00000025574.14|thymidine kinase 1
mm39_v1_chr5_+_140593075_140593107	0.785054	Hoxd1	ENSMUST00000031555.3|Lfng|ENSMUSG00000029570.6|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm39_v1_chr14_+_62529924_62530038	0.760226	Hoxd1	ENSMUST00000166879.8|Rnaseh2b|ENSMUSG00000021932.14|ribonuclease H2, subunit B
mm39_v1_chr2_-_168609110_168609126	0.73733	Hoxd1	ENSMUST00000029061.12|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4	ENSMUST00000103074.2|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr4_-_132072988_132073020	0.713321	Hoxd1	ENSMUST00000030726.13|Rcc1|ENSMUSG00000028896.14|regulator of chromosome condensation 1
mm39_v1_chr4_+_132495636_132495701	0.695597	Hoxd1	ENSMUST00000102561.11|Rpa2|ENSMUSG00000028884.15|replication protein A2
mm39_v1_chr18_+_31742565_31742565	0.675749	Hoxd1	ENSMUST00000164667.2|B930094E09Rik|ENSMUSG00000092124.2|RIKEN cDNA B930094E09 gene
mm39_v1_chr4_-_132073048_132073058	0.673384	Hoxd1	ENSMUST00000084250.11|Rcc1|ENSMUSG00000028896.14|regulator of chromosome condensation 1
mm39_v1_chr17_-_56343531_56343624	0.671774	Hoxd1	ENSMUST00000233803.2|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr12_-_114487525_114487579	0.670181	Hoxd1	ENSMUST00000103495.3|Ighv10-3|ENSMUSG00000095700.3|immunoglobulin heavy variable V10-3
mm39_v1_chr3_+_60503051_60503132	0.650921	Hoxd1	ENSMUST00000192757.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000193518.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000195817.3|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr17_-_56343625_56343647	0.636144	Hoxd1	ENSMUST00000003268.11|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr5_-_140687995_140688133	0.626507	Hoxd1	ENSMUST00000135028.5|Iqce|ENSMUSG00000036555.15|IQ motif containing E	ENSMUST00000077890.12|Iqce|ENSMUSG00000036555.15|IQ motif containing E	ENSMUST00000041783.14|Iqce|ENSMUSG00000036555.15|IQ motif containing E	ENSMUST00000142081.6|Iqce|ENSMUSG00000036555.15|IQ motif containing E
mm39_v1_chr14_+_32043944_32043999	0.62085	Hoxd1	ENSMUST00000022480.8|Ogdhl|ENSMUSG00000021913.9|oxoglutarate dehydrogenase-like	ENSMUST00000228529.2|Ogdhl|ENSMUSG00000021913.9|oxoglutarate dehydrogenase-like
mm39_v1_chr11_-_107228382_107228463	0.617537	Hoxd1	ENSMUST00000040380.13|Pitpnc1|ENSMUSG00000040430.19|phosphatidylinositol transfer protein, cytoplasmic 1
mm39_v1_chr9_+_5298669_5298701	0.616471	Hoxd1	ENSMUST00000238505.2|Casp1|ENSMUSG00000025888.7|caspase 1
mm39_v1_chr2_+_69652714_69652855	0.604266	Hoxd1	ENSMUST00000053087.4|Klhl23|ENSMUSG00000042155.4|kelch-like 23
mm39_v1_chr11_-_99121822_99121844	0.59335	Hoxd1	ENSMUST00000103133.4|Smarce1|ENSMUSG00000037935.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm39_v1_chr19_-_39729431_39729498	0.572713	Hoxd1	ENSMUST00000099472.4|Cyp2c68|ENSMUSG00000074882.4|cytochrome P450, family 2, subfamily c, polypeptide 68
mm39_v1_chr8_-_86107593_86107613	0.562732	Hoxd1	ENSMUST00000122452.8|Mylk3|ENSMUSG00000031698.15|myosin light chain kinase 3
mm39_v1_chr2_-_58050494_58050507	0.542604	Hoxd1	ENSMUST00000028175.7|Cytip|ENSMUSG00000026832.13|cytohesin 1 interacting protein
mm39_v1_chr7_+_89814713_89814756	0.539934	Hoxd1	ENSMUST00000207084.2|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein
mm39_v1_chr5_+_90708962_90709076	0.536442	Hoxd1	ENSMUST00000094615.8|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1	ENSMUST00000200765.2|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1
mm39_v1_chr10_+_12936248_12936282	0.512562	Hoxd1	ENSMUST00000193426.6|Plagl1|ENSMUSG00000019817.19|pleiomorphic adenoma gene-like 1
mm39_v1_chr10_-_128462616_128462635	0.498369	Hoxd1	ENSMUST00000026420.7|Rps26|ENSMUSG00000025362.7|ribosomal protein S26
mm39_v1_chr1_-_173161069_173161088	0.487017	Hoxd1	ENSMUST00000038227.6|Ackr1|ENSMUSG00000037872.6|atypical chemokine receptor 1 (Duffy blood group)
mm39_v1_chr17_-_57338468_57338538	0.486029	Hoxd1	ENSMUST00000007814.10|Khsrp|ENSMUSG00000007670.11|KH-type splicing regulatory protein	ENSMUST00000233480.2|Khsrp|ENSMUSG00000007670.11|KH-type splicing regulatory protein
mm39_v1_chr11_+_43572825_43572918	0.47633	Hoxd1	ENSMUST00000061070.6|Pwwp2a|ENSMUSG00000044950.8|PWWP domain containing 2A	ENSMUST00000094294.5|Pwwp2a|ENSMUSG00000044950.8|PWWP domain containing 2A
mm39_v1_chr6_-_69553484_69553506	0.464898	Hoxd1	ENSMUST00000103357.4|Igkv4-57|ENSMUSG00000076556.4|immunoglobulin kappa variable 4-57
mm39_v1_chr6_-_69415741_69415741	0.463717	Hoxd1	ENSMUST00000103354.3|Igkv4-59|ENSMUSG00000094006.3|immunoglobulin kappa variable 4-59
mm39_v1_chr13_+_51799268_51799342	0.432249	Hoxd1	ENSMUST00000075853.6|Cks2|ENSMUSG00000062248.6|CDC28 protein kinase regulatory subunit 2
mm39_v1_chr19_-_32173824_32173842	0.427362	Hoxd1	ENSMUST00000151822.2|Sgms1|ENSMUSG00000040451.19|sphingomyelin synthase 1
mm39_v1_chr12_+_80691275_80691299	0.404067	Hoxd1	ENSMUST00000217889.2|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9
mm39_v1_chr10_+_94411119_94411152	0.397956	Hoxd1	ENSMUST00000121471.8|Tmcc3|ENSMUSG00000020023.19|transmembrane and coiled coil domains 3
mm39_v1_chr3_-_87081939_87082054	0.39549	Hoxd1	ENSMUST00000159976.8|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1	ENSMUST00000107618.9|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1
mm39_v1_chr19_-_24178000_24178016	0.393433	Hoxd1	ENSMUST00000233658.3|Tjp2|ENSMUSG00000024812.12|tight junction protein 2
mm39_v1_chr19_+_8779903_8779922	0.37715	Hoxd1	ENSMUST00000172175.3|Zbtb3|ENSMUSG00000071661.8|zinc finger and BTB domain containing 3
mm39_v1_chr10_+_80003612_80003680	0.375874	Hoxd1	ENSMUST00000105365.9|Cirbp|ENSMUSG00000045193.14|cold inducible RNA binding protein
mm39_v1_chr2_+_126398048_126398048	0.375637	Hoxd1	ENSMUST00000141482.3|Slc27a2|ENSMUSG00000027359.17|solute carrier family 27 (fatty acid transporter), member 2
mm39_v1_chr14_+_69585036_69585036	0.374339	Hoxd1	ENSMUST00000064831.6|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4
mm39_v1_chr16_+_45044678_45044710	0.371717	Hoxd1	ENSMUST00000102802.10|Btla|ENSMUSG00000052013.16|B and T lymphocyte associated	ENSMUST00000063654.6|Btla|ENSMUSG00000052013.16|B and T lymphocyte associated
mm39_v1_chr18_+_37898633_37898633	0.354124	Hoxd1	ENSMUST00000044851.8|Pcdhga12|ENSMUSG00000102428.2|protocadherin gamma subfamily A, 12
mm39_v1_chr6_+_68279392_68279411	0.353342	Hoxd1	ENSMUST00000103322.3|Igkv2-109|ENSMUSG00000105606.2|immunoglobulin kappa variable 2-109
mm39_v1_chr1_+_40478787_40478815	0.351858	Hoxd1	ENSMUST00000097772.10|Il1rl1|ENSMUSG00000026069.16|interleukin 1 receptor-like 1
mm39_v1_chr6_-_57512355_57512433	0.351337	Hoxd1	ENSMUST00000042766.6|Ppm1k|ENSMUSG00000037826.6|protein phosphatase 1K (PP2C domain containing)
mm39_v1_chr7_+_99808452_99808489	0.342883	Hoxd1	ENSMUST00000032967.4|Lipt2|ENSMUSG00000030725.5|lipoyl(octanoyl) transferase 2 (putative)
mm39_v1_chr7_-_44578834_44578942	0.340897	Hoxd1	ENSMUST00000107857.11|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000167930.8|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000085399.13|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit	ENSMUST00000166972.9|Ap2a1|ENSMUSG00000060279.15|adaptor-related protein complex 2, alpha 1 subunit
mm39_v1_chr12_-_55061117_55061138	0.332441	Hoxd1	ENSMUST00000172875.8|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A
mm39_v1_chr7_+_45271229_45271249	0.327743	Hoxd1	ENSMUST00000033100.5|Izumo1|ENSMUSG00000064158.7|izumo sperm-egg fusion 1
mm39_v1_chr3_-_86827664_86827720	0.325481	Hoxd1	ENSMUST00000194452.2|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2	ENSMUST00000191752.6|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2
mm39_v1_chr3_-_15902583_15902692	0.32514	Hoxd1	ENSMUST00000108354.8|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000108349.2|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000108352.9|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000108350.8|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C	ENSMUST00000050623.11|Sirpb1c|ENSMUSG00000074677.12|signal-regulatory protein beta 1C
mm39_v1_chr6_+_123239076_123239144	0.310813	Hoxd1	ENSMUST00000032240.4|Clec4d|ENSMUSG00000030144.5|C-type lectin domain family 4, member d
mm39_v1_chr1_+_139382485_139382608	0.30518	Hoxd1	ENSMUST00000200083.5|Aspm|ENSMUSG00000033952.15|abnormal spindle microtubule assembly	ENSMUST00000053364.12|Aspm|ENSMUSG00000033952.15|abnormal spindle microtubule assembly
mm39_v1_chr14_-_104760051_104760143	0.304483	Hoxd1	ENSMUST00000022716.4|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000228448.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000227640.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1
mm39_v1_chr3_-_86827640_86827656	0.303366	Hoxd1	ENSMUST00000195561.6|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2
mm39_v1_chr6_-_69584812_69584840	0.301724	Hoxd1	ENSMUST00000103359.3|Igkv4-55|ENSMUSG00000096833.3|immunoglobulin kappa variable 4-55
mm39_v1_chr11_-_45846291_45846321	0.299122	Hoxd1	ENSMUST00000011398.13|Thg1l|ENSMUSG00000011254.17|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm39_v1_chr9_-_70842090_70842095	0.298432	Hoxd1	ENSMUST00000034731.10|Lipc|ENSMUSG00000032207.11|lipase, hepatic
mm39_v1_chr7_+_99808526_99808566	0.297828	Hoxd1	ENSMUST00000207825.2|Lipt2|ENSMUSG00000030725.5|lipoyl(octanoyl) transferase 2 (putative)
mm39_v1_chr9_-_70841881_70841906	0.29671	Hoxd1	ENSMUST00000214995.2|Lipc|ENSMUSG00000032207.11|lipase, hepatic
mm39_v1_chr19_-_7688628_7688677	0.294979	Hoxd1	ENSMUST00000025666.8|Slc22a19|ENSMUSG00000024757.8|solute carrier family 22 (organic anion transporter), member 19
mm39_v1_chr15_-_100322089_100322100	0.294912	Hoxd1	ENSMUST00000154331.2|Slc11a2|ENSMUSG00000023030.17|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm39_v1_chr12_-_113790741_113790824	0.290015	Hoxd1	ENSMUST00000103457.3|Ighv5-15|ENSMUSG00000094134.3|immunoglobulin heavy variable 5-15	ENSMUST00000192877.2|Ighv5-15|ENSMUSG00000094134.3|immunoglobulin heavy variable 5-15
mm39_v1_chr10_-_112764879_112764919	0.289143	Hoxd1	ENSMUST00000099276.4|Atxn7l3b|ENSMUSG00000074748.4|ataxin 7-like 3B
mm39_v1_chr13_-_78344492_78344561	0.287347	Hoxd1	ENSMUST00000125176.3|Nr2f1|ENSMUSG00000069171.15|nuclear receptor subfamily 2, group F, member 1
mm39_v1_chr7_+_101546059_101546168	0.278969	Hoxd1	ENSMUST00000143835.8|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15
mm39_v1_chr2_-_168608949_168608965	0.271264	Hoxd1	ENSMUST00000075044.10|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr11_-_99134885_99134964	0.271065	Hoxd1	ENSMUST00000103132.10|Krt222|ENSMUSG00000035849.15|keratin 222	ENSMUST00000038214.7|Krt222|ENSMUSG00000035849.15|keratin 222
mm39_v1_chr18_-_61840654_61840729	0.259231	Hoxd1	ENSMUST00000025472.7|Pcyox1l|ENSMUSG00000024579.8|prenylcysteine oxidase 1 like
mm39_v1_chr1_+_161796854_161796881	0.251308	Hoxd1	ENSMUST00000160881.2|Pigc|ENSMUSG00000026698.9|phosphatidylinositol glycan anchor biosynthesis, class C	ENSMUST00000159648.2|Pigc|ENSMUSG00000026698.9|phosphatidylinositol glycan anchor biosynthesis, class C
mm39_v1_chr4_-_43710231_43710255	0.250603	Hoxd1	ENSMUST00000217544.2|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71	ENSMUST00000107862.3|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71
mm39_v1_chr4_+_134658209_134658221	0.248834	Hoxd1	ENSMUST00000030622.3|Syf2|ENSMUSG00000028821.9|SYF2 homolog, RNA splicing factor (S. cerevisiae)
mm39_v1_chr18_-_24736521_24736609	0.245246	Hoxd1	ENSMUST00000154205.2|Slc39a6|ENSMUSG00000024270.12|solute carrier family 39 (metal ion transporter), member 6
mm39_v1_chr3_-_16060545_16060601	0.24438	Hoxd1	ENSMUST00000194367.6|Gm5150|ENSMUSG00000078780.8|predicted gene 5150
mm39_v1_chr10_-_44024843_44024866	0.244158	Hoxd1	ENSMUST00000200401.2|Crybg1|ENSMUSG00000019866.16|crystallin beta-gamma domain containing 1
mm39_v1_chr1_-_4479445_4479513	0.23866	Hoxd1	ENSMUST00000208660.2|Rp1|ENSMUSG00000025900.14|retinitis pigmentosa 1 (human)
mm39_v1_chr2_+_85809620_85809620	0.236129	Hoxd1	ENSMUST00000056849.3|Olfr1030|ENSMUSG00000044923.5|olfactory receptor 1030
mm39_v1_chr11_+_99748741_99748744	0.235388	Hoxd1	ENSMUST00000107434.2|Gm11568|ENSMUSG00000069717.8|predicted gene 11568
mm39_v1_chr10_-_129107354_129107354	0.225995	Hoxd1	ENSMUST00000204573.3|Olfr777|ENSMUSG00000062914.4|olfactory receptor 777
mm39_v1_chr9_+_105272507_105272614	0.225759	Hoxd1	ENSMUST00000035181.10|Aste1|ENSMUSG00000032567.17|asteroid homolog 1	ENSMUST00000123807.8|Aste1|ENSMUSG00000032567.17|asteroid homolog 1
mm39_v1_chr5_-_64126194_64126247	0.223124	Hoxd1	ENSMUST00000154169.4|Rell1|ENSMUSG00000047881.15|RELT-like 1
mm39_v1_chr3_-_16060491_16060500	0.222245	Hoxd1	ENSMUST00000108347.3|Gm5150|ENSMUSG00000078780.8|predicted gene 5150
mm39_v1_chr15_-_79658608_79658673	0.222137	Hoxd1	ENSMUST00000229644.2|Dnal4|ENSMUSG00000022420.17|dynein, axonemal, light chain 4	ENSMUST00000023055.8|Dnal4|ENSMUSG00000022420.17|dynein, axonemal, light chain 4
mm39_v1_chr2_-_111843053_111843053	0.221555	Hoxd1	ENSMUST00000213559.3|Olfr1310|ENSMUSG00000108827.4|olfactory receptor 1310
mm39_v1_chrX_+_100473161_100473315	0.217487	Hoxd1	ENSMUST00000033673.7|Nono|ENSMUSG00000031311.18|non-POU-domain-containing, octamer binding protein
mm39_v1_chr1_+_161796748_161796826	0.215999	Hoxd1	ENSMUST00000111594.3|Pigc|ENSMUSG00000026698.9|phosphatidylinositol glycan anchor biosynthesis, class C	ENSMUST00000028021.7|Pigc|ENSMUSG00000026698.9|phosphatidylinositol glycan anchor biosynthesis, class C	ENSMUST00000161826.2|Gm38304|ENSMUSG00000103393.2|predicted gene, 38304	ENSMUST00000193784.2|Pigc|ENSMUSG00000026698.9|phosphatidylinositol glycan anchor biosynthesis, class C
mm39_v1_chr8_-_46542730_46542730	0.215041	Hoxd1	ENSMUST00000144244.2|Snx25|ENSMUSG00000038291.17|sorting nexin 25
mm39_v1_chr4_-_147894245_147894297	0.214698	Hoxd1	ENSMUST00000105734.10|Zfp984|ENSMUSG00000078495.11|zinc finger protein 984	ENSMUST00000176201.2|Gm20707|ENSMUSG00000093594.2|predicted gene 20707
mm39_v1_chr11_-_76386190_76386282	0.214373	Hoxd1	ENSMUST00000108408.9|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr2_-_86109346_86109432	0.207842	Hoxd1	ENSMUST00000217294.2|Olfr1051|ENSMUSG00000075193.3|olfactory receptor 1051	ENSMUST00000217245.2|Olfr1051|ENSMUSG00000075193.3|olfactory receptor 1051	ENSMUST00000216432.2|Olfr1051|ENSMUSG00000075193.3|olfactory receptor 1051
mm39_v1_chr1_-_171854818_171854880	0.20689	Hoxd1	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr9_-_119170456_119170486	0.204582	Hoxd1	ENSMUST00000139870.2|Myd88|ENSMUSG00000032508.9|myeloid differentiation primary response gene 88
mm39_v1_chr14_+_65612788_65612842	0.203251	Hoxd1	ENSMUST00000224687.2|Zfp395|ENSMUSG00000034522.11|zinc finger protein 395
mm39_v1_chr2_+_172212577_172212641	0.201513	Hoxd1	ENSMUST00000151511.8|Cstf1|ENSMUSG00000027498.15|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm39_v1_chrM_+_7758_7775	0.200642	Hoxd1	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.1|mitochondrially encoded ATP synthase 8
mm39_v1_chr3_-_120965327_120965367	0.194449	Hoxd1	ENSMUST00000170781.2|Rwdd3|ENSMUSG00000028133.18|RWD domain containing 3	ENSMUST00000039761.12|Rwdd3|ENSMUSG00000028133.18|RWD domain containing 3	ENSMUST00000106467.8|Rwdd3|ENSMUSG00000028133.18|RWD domain containing 3	ENSMUST00000106466.10|Rwdd3|ENSMUSG00000028133.18|RWD domain containing 3	ENSMUST00000164925.9|Rwdd3|ENSMUSG00000028133.18|RWD domain containing 3
mm39_v1_chr11_-_6217718_6217772	0.19264	Hoxd1	ENSMUST00000004507.11|Ddx56|ENSMUSG00000004393.11|DEAD box helicase 56	ENSMUST00000151446.2|Ddx56|ENSMUSG00000004393.11|DEAD box helicase 56
mm39_v1_chr7_-_103094646_103094646	0.187838	Hoxd1	ENSMUST00000215417.2|Olfr605|ENSMUSG00000109659.4|olfactory receptor 605
mm39_v1_chr10_-_53252210_53252261	0.186113	Hoxd1	ENSMUST00000095691.7|Cep85l|ENSMUSG00000038594.10|centrosomal protein 85-like
mm39_v1_chr2_-_20948230_20948253	0.182013	Hoxd1	ENSMUST00000140230.2|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr14_-_59602882_59602943	0.174837	Hoxd1	ENSMUST00000160425.8|Phf11d|ENSMUSG00000068245.15|PHD finger protein 11D	ENSMUST00000095157.11|Phf11d|ENSMUSG00000068245.15|PHD finger protein 11D
mm39_v1_chr11_+_109434519_109434580	0.171482	Hoxd1	ENSMUST00000106696.2|Arsg|ENSMUSG00000020604.14|arylsulfatase G
mm39_v1_chr1_+_40478926_40478943	0.170989	Hoxd1	ENSMUST00000173514.8|Il1rl1|ENSMUSG00000026069.16|interleukin 1 receptor-like 1
mm39_v1_chr2_+_87696836_87696836	0.166278	Hoxd1	ENSMUST00000213308.3|Olfr1152|ENSMUSG00000045225.5|olfactory receptor 1152
mm39_v1_chr4_+_147216495_147216495	0.163222	Hoxd1	ENSMUST00000084149.10|Zfp991|ENSMUSG00000067916.10|zinc finger protein 991
mm39_v1_chr17_-_37399343_37399391	0.155477	Hoxd1	ENSMUST00000207101.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90	ENSMUST00000217397.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90	ENSMUST00000215195.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90	ENSMUST00000216488.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90
mm39_v1_chr15_-_79658584_79658603	0.154861	Hoxd1	ENSMUST00000069877.12|Dnal4|ENSMUSG00000022420.17|dynein, axonemal, light chain 4
mm39_v1_chr7_+_101545547_101545638	0.152922	Hoxd1	ENSMUST00000035395.14|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15	ENSMUST00000106973.8|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15	ENSMUST00000144207.9|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15
mm39_v1_chr5_-_140986312_140986406	0.151058	Hoxd1	ENSMUST00000085786.7|Card11|ENSMUSG00000036526.9|caspase recruitment domain family, member 11
mm39_v1_chr2_-_27365633_27365710	0.150487	Hoxd1	ENSMUST00000138693.8|Brd3|ENSMUSG00000026918.17|bromodomain containing 3	ENSMUST00000113941.9|Brd3|ENSMUSG00000026918.17|bromodomain containing 3	ENSMUST00000077737.13|Brd3|ENSMUSG00000026918.17|bromodomain containing 3
mm39_v1_chr11_+_35011953_35012051	0.145494	Hoxd1	ENSMUST00000069837.4|Slit3|ENSMUSG00000056427.11|slit guidance ligand 3
mm39_v1_chr11_+_60428788_60428810	0.144546	Hoxd1	ENSMUST00000044250.4|Alkbh5|ENSMUSG00000042650.4|alkB homolog 5, RNA demethylase
mm39_v1_chr17_+_37148015_37148111	0.142412	Hoxd1	ENSMUST00000179968.8|Trim26|ENSMUSG00000024457.17|tripartite motif-containing 26	ENSMUST00000130367.8|Trim26|ENSMUSG00000024457.17|tripartite motif-containing 26	ENSMUST00000053434.15|Trim26|ENSMUSG00000024457.17|tripartite motif-containing 26	ENSMUST00000130801.8|Trim26|ENSMUSG00000024457.17|tripartite motif-containing 26	ENSMUST00000144182.8|Trim26|ENSMUSG00000024457.17|tripartite motif-containing 26	ENSMUST00000123715.8|Trim26|ENSMUSG00000024457.17|tripartite motif-containing 26
mm39_v1_chr2_-_45007407_45007421	0.141268	Hoxd1	ENSMUST00000176438.9|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr13_-_74956640_74956691	0.140959	Hoxd1	ENSMUST00000231578.2|Cast|ENSMUSG00000021585.11|calpastatin
mm39_v1_chr2_-_150097511_150097511	0.139292	Hoxd1	ENSMUST00000063463.6|Gm21994|ENSMUSG00000074735.3|predicted gene 21994
mm39_v1_chr2_+_118877594_118877605	0.136081	Hoxd1	ENSMUST00000152380.8|Knl1|ENSMUSG00000027326.14|kinetochore scaffold 1	ENSMUST00000099542.9|Knl1|ENSMUSG00000027326.14|kinetochore scaffold 1
mm39_v1_chr3_-_72875187_72875202	0.131496	Hoxd1	ENSMUST00000167334.8|Sis|ENSMUSG00000027790.15|sucrase isomaltase (alpha-glucosidase)
mm39_v1_chr10_+_89906956_89906982	0.129728	Hoxd1	ENSMUST00000183109.2|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr3_+_94745009_94745034	0.128479	Hoxd1	ENSMUST00000107266.8|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain	ENSMUST00000042402.12|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain	ENSMUST00000107269.2|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain
mm39_v1_chr19_-_40371016_40371077	0.118471	Hoxd1	ENSMUST00000225766.3|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1
mm39_v1_chr7_+_45364822_45364881	0.118434	Hoxd1	ENSMUST00000210640.2|Rpl18|ENSMUSG00000059070.17|ribosomal protein L18
mm39_v1_chr17_-_37523969_37524009	0.118273	Hoxd1	ENSMUST00000060728.7|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95	ENSMUST00000216318.2|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95
mm39_v1_chr5_-_138185438_138185499	0.117976	Hoxd1	ENSMUST00000110937.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000139276.2|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000048698.14|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000123415.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr1_-_4563821_4563958	0.117329	Hoxd1	ENSMUST00000191939.2|Sox17|ENSMUSG00000025902.14|SRY (sex determining region Y)-box 17
mm39_v1_chr5_-_62923463_62923615	0.117008	Hoxd1	ENSMUST00000076623.8|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	ENSMUST00000159470.3|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm39_v1_chr17_+_35150229_35150360	0.113933	Hoxd1	ENSMUST00000007253.6|Neu1|ENSMUSG00000007038.6|neuraminidase 1
mm39_v1_chr19_-_47680528_47680535	0.112174	Hoxd1	ENSMUST00000026045.14|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1	ENSMUST00000086923.6|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1
mm39_v1_chr2_+_85868891_85868891	0.109216	Hoxd1	ENSMUST00000218397.2|Olfr1033|ENSMUSG00000045392.9|olfactory receptor 1033
mm39_v1_chr1_-_33853598_33853655	0.108721	Hoxd1	ENSMUST00000019861.13|Zfp451|ENSMUSG00000042197.14|zinc finger protein 451	ENSMUST00000044455.8|Zfp451|ENSMUSG00000042197.14|zinc finger protein 451
mm39_v1_chr19_-_53932581_53932659	0.106216	Hoxd1	ENSMUST00000236885.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1	ENSMUST00000236098.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1	ENSMUST00000236370.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1
mm39_v1_chrM_+_9870_9885	0.105679	Hoxd1	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.1|mitochondrially encoded NADH dehydrogenase 4L
mm39_v1_chr2_-_111880531_111880583	0.104958	Hoxd1	ENSMUST00000213582.2|Olfr1312|ENSMUSG00000074947.4|olfactory receptor 1312	ENSMUST00000213961.3|Olfr1312|ENSMUSG00000074947.4|olfactory receptor 1312	ENSMUST00000215531.2|Olfr1312|ENSMUSG00000074947.4|olfactory receptor 1312
mm39_v1_chr3_+_32490300_32490300	0.0993178	Hoxd1	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr6_-_69245427_69245427	0.0971116	Hoxd1	ENSMUST00000103348.3|Igkv4-70|ENSMUSG00000076547.3|immunoglobulin kappa chain variable 4-70
mm39_v1_chr4_+_145311759_145311791	0.0967243	Hoxd1	ENSMUST00000119718.8|Zfp268|ENSMUSG00000078502.11|zinc finger protein 268
mm39_v1_chr5_+_138185747_138185829	0.0926051	Hoxd1	ENSMUST00000110934.9|Cnpy4|ENSMUSG00000036968.16|canopy FGF signaling regulator 4
mm39_v1_chr7_-_103778992_103779033	0.0909873	Hoxd1	ENSMUST00000053743.6|Ubqln5|ENSMUSG00000055643.5|ubiquilin 5
mm39_v1_chr5_+_145141333_145141478	0.089422	Hoxd1	ENSMUST00000085671.10|Zkscan5|ENSMUSG00000055991.16|zinc finger with KRAB and SCAN domains 5	ENSMUST00000031601.8|Zkscan5|ENSMUSG00000055991.16|zinc finger with KRAB and SCAN domains 5
mm39_v1_chr7_-_126574959_126575095	0.0860159	Hoxd1	ENSMUST00000206296.2|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand	ENSMUST00000205437.3|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand
mm39_v1_chr6_+_129554868_129554868	0.0852728	Hoxd1	ENSMUST00000053708.9|Klre1|ENSMUSG00000050241.9|killer cell lectin-like receptor family E member 1
mm39_v1_chr14_+_57762191_57762261	0.0844714	Hoxd1	ENSMUST00000089494.6|Il17d|ENSMUSG00000050222.12|interleukin 17D
mm39_v1_chr11_-_99265721_99265735	0.0799751	Hoxd1	ENSMUST00000006963.3|Krt28|ENSMUSG00000055937.2|keratin 28
mm39_v1_chr9_+_53678801_53678830	0.0747847	Hoxd1	ENSMUST00000048670.10|Slc35f2|ENSMUSG00000042195.10|solute carrier family 35, member F2
mm39_v1_chr15_-_100321973_100322054	0.0744982	Hoxd1	ENSMUST00000154676.2|Slc11a2|ENSMUSG00000023030.17|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm39_v1_chr4_+_102427247_102427306	0.074149	Hoxd1	ENSMUST00000097950.9|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr19_-_41921676_41921862	0.0741243	Hoxd1	ENSMUST00000075280.12|Exosc1|ENSMUSG00000034321.15|exosome component 1	ENSMUST00000112123.4|Exosc1|ENSMUSG00000034321.15|exosome component 1
mm39_v1_chr5_-_90788323_90788397	0.0674098	Hoxd1	ENSMUST00000202784.4|Rassf6|ENSMUSG00000029370.11|Ras association (RalGDS/AF-6) domain family member 6	ENSMUST00000031317.10|Rassf6|ENSMUSG00000029370.11|Ras association (RalGDS/AF-6) domain family member 6	ENSMUST00000201370.2|Rassf6|ENSMUSG00000029370.11|Ras association (RalGDS/AF-6) domain family member 6
mm39_v1_chr1_-_4430481_4430537	0.0670788	Hoxd1	ENSMUST00000027032.6|Rp1|ENSMUSG00000025900.14|retinitis pigmentosa 1 (human)
mm39_v1_chr2_-_164480710_164480730	0.0667914	Hoxd1	ENSMUST00000109336.2|Wfdc16|ENSMUSG00000070530.6|WAP four-disulfide core domain 16
mm39_v1_chr4_+_145311722_145311736	0.0630858	Hoxd1	ENSMUST00000105739.8|Zfp268|ENSMUSG00000078502.11|zinc finger protein 268
mm39_v1_chr15_+_44482667_44482836	0.0615668	Hoxd1	ENSMUST00000228648.2|Ebag9|ENSMUSG00000022339.10|estrogen receptor-binding fragment-associated gene 9	ENSMUST00000226165.2|Ebag9|ENSMUSG00000022339.10|estrogen receptor-binding fragment-associated gene 9
mm39_v1_chr5_+_52940391_52940458	0.0585398	Hoxd1	ENSMUST00000031077.13|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4	ENSMUST00000113904.9|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4	ENSMUST00000199840.2|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4
mm39_v1_chr5_-_65855511_65855596	0.0579293	Hoxd1	ENSMUST00000201948.4|Pds5a|ENSMUSG00000029202.13|PDS5 cohesin associated factor A
mm39_v1_chr2_-_79738773_79738780	0.0550068	Hoxd1	ENSMUST00000102652.10|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent	ENSMUST00000102651.10|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent
mm39_v1_chr18_+_37488174_37488324	0.0546213	Hoxd1	ENSMUST00000192867.2|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8	ENSMUST00000051163.3|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8
mm39_v1_chr4_-_117539431_117539477	0.0539872	Hoxd1	ENSMUST00000102687.4|Dmap1|ENSMUSG00000009640.12|DNA methyltransferase 1-associated protein 1
mm39_v1_chr5_-_108943211_108943241	0.0530408	Hoxd1	ENSMUST00000004943.2|Tmed11|ENSMUSG00000004821.2|transmembrane p24 trafficking protein 11
mm39_v1_chr3_-_15640045_15640125	0.0489639	Hoxd1	ENSMUST00000192382.6|Sirpb1b|ENSMUSG00000095028.7|signal-regulatory protein beta 1B	ENSMUST00000195778.3|Sirpb1b|ENSMUSG00000095028.7|signal-regulatory protein beta 1B	ENSMUST00000091319.7|Sirpb1b|ENSMUSG00000095028.7|signal-regulatory protein beta 1B
mm39_v1_chr5_-_138185686_138185724	0.0475288	Hoxd1	ENSMUST00000110936.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr18_-_60406338_60406349	0.0472834	Hoxd1	ENSMUST00000090260.6|Gm4841|ENSMUSG00000068606.7|predicted gene 4841
mm39_v1_chr5_+_107645626_107645668	0.0465779	Hoxd1	ENSMUST00000152474.8|Btbd8|ENSMUSG00000111375.5|BTB (POZ) domain containing 8	ENSMUST00000060553.8|Btbd8|ENSMUSG00000111375.5|BTB (POZ) domain containing 8
mm39_v1_chr18_+_37827413_37827444	0.0464218	Hoxd1	ENSMUST00000193414.2|Pcdhga5|ENSMUSG00000103567.2|protocadherin gamma subfamily A, 5
mm39_v1_chr8_-_95929420_95929461	0.0424345	Hoxd1	ENSMUST00000212842.2|Kifc3|ENSMUSG00000031788.15|kinesin family member C3
mm39_v1_chr14_-_52341426_52341468	0.0385204	Hoxd1	ENSMUST00000227536.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000227195.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000228815.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000228198.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000227458.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000228232.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000227242.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000228748.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C
mm39_v1_chr14_+_65504067_65504142	0.0383297	Hoxd1	ENSMUST00000224629.2|Fbxo16|ENSMUSG00000034532.10|F-box protein 16
mm39_v1_chr9_-_85631361_85631391	0.0363459	Hoxd1	ENSMUST00000039213.15|Ibtk|ENSMUSG00000035941.16|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm39_v1_chr2_+_88470886_88470941	0.0340944	Hoxd1	ENSMUST00000217379.2|Olfr1191-ps1|ENSMUSG00000081948.5|olfactory receptor 1191, pseudogene 1	ENSMUST00000120598.3|Olfr1191-ps1|ENSMUSG00000081948.5|olfactory receptor 1191, pseudogene 1
mm39_v1_chr10_-_129509659_129509734	0.0334006	Hoxd1	ENSMUST00000213294.2|Olfr801|ENSMUSG00000058513.8|olfactory receptor 801	ENSMUST00000216067.3|Olfr801|ENSMUSG00000058513.8|olfactory receptor 801	ENSMUST00000203424.2|Olfr801|ENSMUSG00000058513.8|olfactory receptor 801
mm39_v1_chr3_+_55689921_55689940	0.0330974	Hoxd1	ENSMUST00000075422.6|Mab21l1|ENSMUSG00000056947.6|mab-21-like 1
mm39_v1_chr2_+_172212642_172212664	0.0328544	Hoxd1	ENSMUST00000116375.2|Cstf1|ENSMUSG00000027498.15|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm39_v1_chr4_+_52596266_52596278	0.0315027	Hoxd1	ENSMUST00000029995.6|Toporsl|ENSMUSG00000028314.7|topoisomerase I binding, arginine/serine-rich like
mm39_v1_chr13_-_74956030_74956108	0.0306417	Hoxd1	ENSMUST00000065629.6|Cast|ENSMUSG00000021585.11|calpastatin
mm39_v1_chr5_-_87638728_87638734	0.0304311	Hoxd1	ENSMUST00000147854.6|Ugt2a1|ENSMUSG00000106677.2|UDP glucuronosyltransferase 2 family, polypeptide A1
mm39_v1_chr2_+_65451100_65451170	0.028813	Hoxd1	ENSMUST00000144254.6|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha	ENSMUST00000028377.14|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha
mm39_v1_chr3_+_40755211_40755224	0.0270381	Hoxd1	ENSMUST00000204473.2|Plk4|ENSMUSG00000025758.11|polo like kinase 4
mm39_v1_chr9_-_89586960_89587125	0.0248839	Hoxd1	ENSMUST00000058488.9|Tmed3|ENSMUSG00000032353.10|transmembrane p24 trafficking protein 3
mm39_v1_chr1_-_162913210_162913242	0.0234083	Hoxd1	ENSMUST00000096608.5|Mroh9|ENSMUSG00000071890.5|maestro heat-like repeat family member 9
mm39_v1_chr15_-_101268036_101268050	0.0226759	Hoxd1	ENSMUST00000077196.6|Krt80|ENSMUSG00000037185.10|keratin 80
mm39_v1_chrX_+_9751861_9751861	0.0200723	Hoxd1	ENSMUST00000067529.9|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5	ENSMUST00000086165.4|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5
mm39_v1_chr14_-_52341472_52341485	0.0185359	Hoxd1	ENSMUST00000111610.12|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C	ENSMUST00000164655.2|Hnrnpc|ENSMUSG00000060373.16|heterogeneous nuclear ribonucleoprotein C
mm39_v1_chr8_+_84728123_84728206	0.0177208	Hoxd1	ENSMUST00000060357.15|1700067K01Rik|ENSMUSG00000046408.16|RIKEN cDNA 1700067K01 gene	ENSMUST00000239176.2|1700067K01Rik|ENSMUSG00000046408.16|RIKEN cDNA 1700067K01 gene
mm39_v1_chr14_+_25980463_25980463	0.017282	Hoxd1	ENSMUST00000173155.8|Duxbl1|ENSMUSG00000048502.15|double homeobox B-like 1
mm39_v1_chrM_+_7779_7927	0.0169914	Hoxd1	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm39_v1_chr15_+_16778187_16778187	0.0165031	Hoxd1	ENSMUST00000026432.8|Cdh9|ENSMUSG00000025370.8|cadherin 9
mm39_v1_chr6_-_129484070_129484134	0.0159232	Hoxd1	ENSMUST00000183258.8|Olr1|ENSMUSG00000030162.15|oxidized low density lipoprotein (lectin-like) receptor 1	ENSMUST00000182784.4|Olr1|ENSMUSG00000030162.15|oxidized low density lipoprotein (lectin-like) receptor 1	ENSMUST00000032265.13|Olr1|ENSMUSG00000030162.15|oxidized low density lipoprotein (lectin-like) receptor 1	ENSMUST00000162815.2|Olr1|ENSMUSG00000030162.15|oxidized low density lipoprotein (lectin-like) receptor 1
mm39_v1_chr10_+_115979787_115979808	0.0157783	Hoxd1	ENSMUST00000105271.9|Ptprr|ENSMUSG00000020151.17|protein tyrosine phosphatase, receptor type, R
mm39_v1_chr8_-_62576140_62576157	0.0133183	Hoxd1	ENSMUST00000034052.14|Anxa10|ENSMUSG00000031635.15|annexin A10	ENSMUST00000034054.9|Anxa10|ENSMUSG00000031635.15|annexin A10
mm39_v1_chr7_-_10292412_10292412	0.0120963	Hoxd1	ENSMUST00000236246.2|Vmn1r68|ENSMUSG00000047031.6|vomeronasal 1 receptor 68
mm39_v1_chr15_-_9529898_9529932	0.011875	Hoxd1	ENSMUST00000228782.2|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor	ENSMUST00000003981.6|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor
mm39_v1_chr6_-_68994064_68994119	0.0111751	Hoxd1	ENSMUST00000103341.4|Igkv4-80|ENSMUSG00000076540.4|immunoglobulin kappa variable 4-80
mm39_v1_chr1_+_107288928_107288928	0.0104842	Hoxd1	ENSMUST00000191425.7|Serpinb11|ENSMUSG00000026327.9|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm39_v1_chr8_+_75720286_75720326	0.00975517	Hoxd1	ENSMUST00000211863.2|Hmgxb4|ENSMUSG00000034518.15|HMG box domain containing 4
mm39_v1_chr4_+_109092610_109092610	0.00652527	Hoxd1	ENSMUST00000106628.8|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr7_+_84562283_84562297	0.00647057	Hoxd1	ENSMUST00000216367.2|Olfr290|ENSMUSG00000070459.7|olfactory receptor 290	ENSMUST00000214501.3|Olfr290|ENSMUSG00000070459.7|olfactory receptor 290
mm39_v1_chr14_-_54651442_54651542	0.0042962	Hoxd1	ENSMUST00000227334.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr12_-_80690573_80690631	0.00276205	Hoxd1	ENSMUST00000166931.2|Erh|ENSMUSG00000021131.15|ERH mRNA splicing and mitosis factor	ENSMUST00000218364.2|Erh|ENSMUSG00000021131.15|ERH mRNA splicing and mitosis factor
