mm39_v1_chr14_+_80237691_80237749	5.97731	Lhx4	ENSMUST00000228749.2|Olfm4|ENSMUSG00000022026.8|olfactomedin 4	ENSMUST00000088735.4|Olfm4|ENSMUSG00000022026.8|olfactomedin 4
mm39_v1_chr11_+_32236945_32236979	4.12898	Lhx4	ENSMUST00000101387.4|Hbq1b|ENSMUSG00000073063.4|hemoglobin, theta 1B
mm39_v1_chr4_+_114914880_114915008	2.82931	Lhx4	ENSMUST00000161601.8|Tal1|ENSMUSG00000028717.13|T cell acute lymphocytic leukemia 1
mm39_v1_chr15_+_82225380_82225414	2.67009	Lhx4	ENSMUST00000050349.3|Pheta2|ENSMUSG00000049687.6|PH domain containing endocytic trafficking adaptor 2
mm39_v1_chrX_+_149330371_149330455	2.39	Lhx4	ENSMUST00000066337.13|Alas2|ENSMUSG00000025270.14|aminolevulinic acid synthase 2, erythroid	ENSMUST00000112715.2|Alas2|ENSMUSG00000025270.14|aminolevulinic acid synthase 2, erythroid
mm39_v1_chr10_+_75402090_75402136	1.99673	Lhx4	ENSMUST00000129232.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1	ENSMUST00000143792.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1
mm39_v1_chr6_-_136918885_136918909	1.93302	Lhx4	ENSMUST00000111891.4|Arhgdib|ENSMUSG00000030220.14|Rho, GDP dissociation inhibitor (GDI) beta
mm39_v1_chrX_-_73290140_73290161	1.58849	Lhx4	ENSMUST00000101454.9|Flna|ENSMUSG00000031328.17|filamin, alpha	ENSMUST00000033699.13|Flna|ENSMUSG00000031328.17|filamin, alpha
mm39_v1_chr6_-_41423004_41423079	1.58787	Lhx4	ENSMUST00000095999.7|Gm10334|ENSMUSG00000071517.7|predicted gene 10334
mm39_v1_chr6_-_115014777_115014842	1.57789	Lhx4	ENSMUST00000174848.8|Tamm41|ENSMUSG00000030316.14|TAM41 mitochondrial translocator assembly and maintenance homolog	ENSMUST00000032461.12|Tamm41|ENSMUSG00000030316.14|TAM41 mitochondrial translocator assembly and maintenance homolog
mm39_v1_chr9_+_96140781_96140838	1.55108	Lhx4	ENSMUST00000190104.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000179416.8|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000189606.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr14_+_26722319_26722463	1.54274	Lhx4	ENSMUST00000035433.10|Hesx1|ENSMUSG00000040726.11|homeobox gene expressed in ES cells
mm39_v1_chrX_-_138772383_138772426	1.5322	Lhx4	ENSMUST00000033811.14|Morc4|ENSMUSG00000031434.16|microrchidia 4	ENSMUST00000087401.12|Morc4|ENSMUSG00000031434.16|microrchidia 4
mm39_v1_chr19_-_46033353_46033724	1.48559	Lhx4	ENSMUST00000026252.14|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000156585.9|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000185355.7|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000152946.8|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chr6_-_41354538_41354612	1.42735	Lhx4	ENSMUST00000096003.7|Prss3|ENSMUSG00000071519.7|protease, serine 3
mm39_v1_chrX_-_73289970_73290044	1.42401	Lhx4	ENSMUST00000130007.8|Flna|ENSMUSG00000031328.17|filamin, alpha
mm39_v1_chr9_+_118892497_118892560	1.32856	Lhx4	ENSMUST00000141185.8|Vill|ENSMUSG00000038775.15|villin-like	ENSMUST00000126251.8|Vill|ENSMUSG00000038775.15|villin-like	ENSMUST00000136561.2|Vill|ENSMUSG00000038775.15|villin-like
mm39_v1_chr2_+_163500290_163500430	1.26325	Lhx4	ENSMUST00000164399.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000064703.13|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000099105.9|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000152418.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000126182.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000131228.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma
mm39_v1_chr17_+_34811217_34811303	1.23386	Lhx4	ENSMUST00000038149.13|Pbx2|ENSMUSG00000034673.15|pre B cell leukemia homeobox 2
mm39_v1_chr16_-_21980200_21980200	1.19008	Lhx4	ENSMUST00000115379.2|Igf2bp2|ENSMUSG00000033581.18|insulin-like growth factor 2 mRNA binding protein 2
mm39_v1_chr10_+_79832313_79832339	1.15394	Lhx4	ENSMUST00000132517.8|Abca7|ENSMUSG00000035722.16|ATP-binding cassette, sub-family A (ABC1), member 7
mm39_v1_chr3_-_14843512_14843526	1.06414	Lhx4	ENSMUST00000094365.11|Car1|ENSMUSG00000027556.16|carbonic anhydrase 1
mm39_v1_chr7_+_30193047_30193205	0.989587	Lhx4	ENSMUST00000058280.13|Prodh2|ENSMUSG00000036892.13|proline dehydrogenase (oxidase) 2	ENSMUST00000133318.8|Prodh2|ENSMUSG00000036892.13|proline dehydrogenase (oxidase) 2	ENSMUST00000142575.8|Prodh2|ENSMUSG00000036892.13|proline dehydrogenase (oxidase) 2	ENSMUST00000131040.2|Prodh2|ENSMUSG00000036892.13|proline dehydrogenase (oxidase) 2
mm39_v1_chr5_+_35156389_35156430	0.944091	Lhx4	ENSMUST00000114281.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12	ENSMUST00000114280.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr17_+_46961250_46961267	0.939271	Lhx4	ENSMUST00000043464.14|Cul7|ENSMUSG00000038545.14|cullin 7
mm39_v1_chr3_-_86827640_86827656	0.931019	Lhx4	ENSMUST00000195561.6|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2
mm39_v1_chr9_+_64188857_64188912	0.924207	Lhx4	ENSMUST00000215031.2|Tipin|ENSMUSG00000032397.8|timeless interacting protein	ENSMUST00000213165.2|Tipin|ENSMUSG00000032397.8|timeless interacting protein	ENSMUST00000213289.2|Tipin|ENSMUSG00000032397.8|timeless interacting protein	ENSMUST00000216594.2|Tipin|ENSMUSG00000032397.8|timeless interacting protein	ENSMUST00000034964.7|Tipin|ENSMUSG00000032397.8|timeless interacting protein
mm39_v1_chr5_-_122959321_122959357	0.891002	Lhx4	ENSMUST00000197074.5|Anapc5|ENSMUSG00000029472.14|anaphase-promoting complex subunit 5	ENSMUST00000199406.5|Anapc5|ENSMUSG00000029472.14|anaphase-promoting complex subunit 5	ENSMUST00000196640.5|Anapc5|ENSMUSG00000029472.14|anaphase-promoting complex subunit 5	ENSMUST00000197719.5|Anapc5|ENSMUSG00000029472.14|anaphase-promoting complex subunit 5	ENSMUST00000200645.5|Anapc5|ENSMUSG00000029472.14|anaphase-promoting complex subunit 5
mm39_v1_chr3_-_86827664_86827720	0.866703	Lhx4	ENSMUST00000194452.2|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2	ENSMUST00000191752.6|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2
mm39_v1_chr7_-_45480200_45480368	0.86038	Lhx4	ENSMUST00000107723.9|Grwd1|ENSMUSG00000053801.19|glutamate-rich WD repeat containing 1	ENSMUST00000131384.3|Grwd1|ENSMUSG00000053801.19|glutamate-rich WD repeat containing 1
mm39_v1_chr1_+_34511793_34511838	0.844366	Lhx4	ENSMUST00000188972.3|Ptpn18|ENSMUSG00000026126.16|protein tyrosine phosphatase, non-receptor type 18
mm39_v1_chr19_+_5524701_5524806	0.837072	Lhx4	ENSMUST00000165485.8|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	ENSMUST00000166253.8|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	ENSMUST00000167371.8|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	ENSMUST00000167855.8|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	ENSMUST00000070118.14|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm39_v1_chr4_+_34893772_34893788	0.82638	Lhx4	ENSMUST00000029975.10|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit	ENSMUST00000135871.8|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit	ENSMUST00000108130.2|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit
mm39_v1_chr3_+_89622323_89622388	0.82267	Lhx4	ENSMUST00000098924.9|Adar|ENSMUSG00000027951.17|adenosine deaminase, RNA-specific
mm39_v1_chr9_+_96140750_96140764	0.813203	Lhx4	ENSMUST00000186609.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr10_-_35587888_35587888	0.80455	Lhx4	ENSMUST00000080898.4|Amd2|ENSMUSG00000063953.4|S-adenosylmethionine decarboxylase 2
mm39_v1_chrX_-_101200670_101200704	0.803408	Lhx4	ENSMUST00000056904.3|Ercc6l|ENSMUSG00000051220.3|excision repair cross-complementing rodent repair deficiency complementation group 6 like
mm39_v1_chr13_+_20274708_20274803	0.797872	Lhx4	ENSMUST00000072519.7|Elmo1|ENSMUSG00000041112.18|engulfment and cell motility 1
mm39_v1_chr2_+_36120438_36120557	0.78385	Lhx4	ENSMUST00000062069.6|Ptgs1|ENSMUSG00000047250.14|prostaglandin-endoperoxide synthase 1
mm39_v1_chr6_+_123239076_123239144	0.745527	Lhx4	ENSMUST00000032240.4|Clec4d|ENSMUSG00000030144.5|C-type lectin domain family 4, member d
mm39_v1_chr15_-_103123711_103123793	0.734734	Lhx4	ENSMUST00000122182.2|Cbx5|ENSMUSG00000009575.15|chromobox 5	ENSMUST00000108813.10|Cbx5|ENSMUSG00000009575.15|chromobox 5	ENSMUST00000127191.2|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr7_-_108774367_108774414	0.719668	Lhx4	ENSMUST00000207178.2|Lmo1|ENSMUSG00000036111.9|LIM domain only 1
mm39_v1_chr1_+_63216281_63216303	0.68848	Lhx4	ENSMUST00000188524.2|Eef1b2|ENSMUSG00000025967.17|eukaryotic translation elongation factor 1 beta 2
mm39_v1_chr6_+_72074718_72074741	0.680951	Lhx4	ENSMUST00000187007.3|St3gal5|ENSMUSG00000056091.13|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm39_v1_chr17_-_56343531_56343624	0.679298	Lhx4	ENSMUST00000233803.2|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr17_-_56343625_56343647	0.678154	Lhx4	ENSMUST00000003268.11|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr6_+_72074545_72074617	0.661234	Lhx4	ENSMUST00000069994.11|St3gal5|ENSMUSG00000056091.13|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	ENSMUST00000114112.4|St3gal5|ENSMUSG00000056091.13|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm39_v1_chr9_+_21437440_21437503	0.653309	Lhx4	ENSMUST00000086361.12|AB124611|ENSMUSG00000057191.14|cDNA sequence AB124611	ENSMUST00000173769.3|AB124611|ENSMUSG00000057191.14|cDNA sequence AB124611
mm39_v1_chr3_-_88317601_88317656	0.637271	Lhx4	ENSMUST00000193338.6|Pmf1|ENSMUSG00000028066.16|polyamine-modulated factor 1	ENSMUST00000056370.13|Pmf1|ENSMUSG00000028066.16|polyamine-modulated factor 1
mm39_v1_chr5_+_35156454_35156528	0.626859	Lhx4	ENSMUST00000114283.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr1_-_36312482_36312538	0.624649	Lhx4	ENSMUST00000056946.8|Neurl3|ENSMUSG00000047180.9|neuralized E3 ubiquitin protein ligase 3
mm39_v1_chr1_+_63215976_63216078	0.611434	Lhx4	ENSMUST00000129339.8|Eef1b2|ENSMUSG00000025967.17|eukaryotic translation elongation factor 1 beta 2
mm39_v1_chr17_-_24292453_24292464	0.605628	Lhx4	ENSMUST00000017090.6|Kctd5|ENSMUSG00000016946.7|potassium channel tetramerisation domain containing 5
mm39_v1_chrX_+_152506577_152506642	0.605393	Lhx4	ENSMUST00000140575.8|Nbdy|ENSMUSG00000086316.9|negative regulator of P-body association	ENSMUST00000208373.2|Nbdy|ENSMUSG00000086316.9|negative regulator of P-body association	ENSMUST00000185492.7|Nbdy|ENSMUSG00000086316.9|negative regulator of P-body association	ENSMUST00000149514.8|Nbdy|ENSMUSG00000086316.9|negative regulator of P-body association
mm39_v1_chr15_-_98507913_98507991	0.596742	Lhx4	ENSMUST00000226500.2|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6	ENSMUST00000227501.2|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr19_-_39875192_39875243	0.570791	Lhx4	ENSMUST00000168838.3|Cyp2c69|ENSMUSG00000092008.3|cytochrome P450, family 2, subfamily c, polypeptide 69
mm39_v1_chr6_-_30936013_30936013	0.55501	Lhx4	ENSMUST00000101589.5|Klf14|ENSMUSG00000073209.5|Kruppel-like factor 14
mm39_v1_chr1_+_85503397_85503397	0.543181	Lhx4	ENSMUST00000178024.2|G530012D18Rik|ENSMUSG00000094127.2|RIKEN cDNA G530012D1 gene
mm39_v1_chr7_-_5017642_5017700	0.535755	Lhx4	ENSMUST00000207412.2|Fiz1|ENSMUSG00000061374.15|Flt3 interacting zinc finger protein 1	ENSMUST00000077385.15|Fiz1|ENSMUSG00000061374.15|Flt3 interacting zinc finger protein 1	ENSMUST00000165320.3|Fiz1|ENSMUSG00000061374.15|Flt3 interacting zinc finger protein 1
mm39_v1_chr10_-_37014859_37014933	0.504644	Lhx4	ENSMUST00000092584.6|Marcks|ENSMUSG00000069662.6|myristoylated alanine rich protein kinase C substrate
mm39_v1_chr7_-_115459082_115459098	0.50215	Lhx4	ENSMUST00000206123.2|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr19_+_46385321_46385443	0.496486	Lhx4	ENSMUST00000039922.13|Sufu|ENSMUSG00000025231.18|SUFU negative regulator of hedgehog signaling	ENSMUST00000111867.9|Sufu|ENSMUSG00000025231.18|SUFU negative regulator of hedgehog signaling	ENSMUST00000120778.8|Sufu|ENSMUSG00000025231.18|SUFU negative regulator of hedgehog signaling
mm39_v1_chr3_-_72875187_72875202	0.488083	Lhx4	ENSMUST00000167334.8|Sis|ENSMUSG00000027790.15|sucrase isomaltase (alpha-glucosidase)
mm39_v1_chr7_-_37472979_37473066	0.472413	Lhx4	ENSMUST00000176534.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr10_-_75946790_75946796	0.472144	Lhx4	ENSMUST00000120757.2|Slc5a4b|ENSMUSG00000020226.10|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm39_v1_chr3_+_68776884_68776921	0.466163	Lhx4	ENSMUST00000054551.3|1110032F04Rik|ENSMUSG00000046999.3|RIKEN cDNA 1110032F04 gene
mm39_v1_chr18_+_52958382_52958382	0.458754	Lhx4	ENSMUST00000238707.2|Gm50457|ENSMUSG00000118407.2|predicted gene, 50457
mm39_v1_chr2_-_174188505_174188505	0.456202	Lhx4	ENSMUST00000168292.2|Gm20721|ENSMUSG00000090625.2|predicted gene, 20721
mm39_v1_chr7_+_45271229_45271249	0.454577	Lhx4	ENSMUST00000033100.5|Izumo1|ENSMUSG00000064158.7|izumo sperm-egg fusion 1
mm39_v1_chrX_+_132751729_132751878	0.442417	Lhx4	ENSMUST00000033602.9|Tnmd|ENSMUSG00000031250.9|tenomodulin
mm39_v1_chr14_+_57762191_57762261	0.441721	Lhx4	ENSMUST00000089494.6|Il17d|ENSMUSG00000050222.12|interleukin 17D
mm39_v1_chr2_-_88157559_88157559	0.431539	Lhx4	ENSMUST00000214207.2|Olfr1175|ENSMUSG00000083855.7|olfactory receptor 1175
mm39_v1_chrX_+_9751861_9751861	0.421669	Lhx4	ENSMUST00000067529.9|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5	ENSMUST00000086165.4|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5
mm39_v1_chr6_+_136509922_136509937	0.415415	Lhx4	ENSMUST00000187429.4|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr2_+_109522781_109522889	0.396529	Lhx4	ENSMUST00000111050.10|Bdnf|ENSMUSG00000048482.15|brain derived neurotrophic factor
mm39_v1_chr7_-_15781838_15781874	0.374468	Lhx4	ENSMUST00000210781.2|Bicra|ENSMUSG00000070808.5|BRD4 interacting chromatin remodeling complex associated protein
mm39_v1_chrX_-_8118541_8118645	0.369811	Lhx4	ENSMUST00000115594.8|Ftsj1|ENSMUSG00000031171.12|FtsJ RNA methyltransferase homolog 1 (E. coli)	ENSMUST00000115595.8|Ftsj1|ENSMUSG00000031171.12|FtsJ RNA methyltransferase homolog 1 (E. coli)	ENSMUST00000033513.10|Ftsj1|ENSMUSG00000031171.12|FtsJ RNA methyltransferase homolog 1 (E. coli)
mm39_v1_chr11_+_6510167_6510190	0.365282	Lhx4	ENSMUST00000109722.9|Ccm2|ENSMUSG00000000378.16|cerebral cavernous malformation 2
mm39_v1_chr2_+_85838122_85838122	0.333473	Lhx4	ENSMUST00000062166.2|Olfr1032|ENSMUSG00000042796.3|olfactory receptor 1032
mm39_v1_chr7_+_89814713_89814756	0.331986	Lhx4	ENSMUST00000207084.2|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein
mm39_v1_chrX_+_168468186_168468246	0.33058	Lhx4	ENSMUST00000112107.8|Mid1|ENSMUSG00000035299.17|midline 1	ENSMUST00000112104.8|Mid1|ENSMUSG00000035299.17|midline 1
mm39_v1_chr2_+_87696836_87696836	0.325146	Lhx4	ENSMUST00000213308.3|Olfr1152|ENSMUSG00000045225.5|olfactory receptor 1152
mm39_v1_chr2_-_34716199_34716252	0.324582	Lhx4	ENSMUST00000113075.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000113080.9|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000091020.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr16_-_90607251_90607318	0.31958	Lhx4	ENSMUST00000140920.2|Urb1|ENSMUSG00000039929.15|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm39_v1_chr2_-_111843053_111843053	0.313086	Lhx4	ENSMUST00000213559.3|Olfr1310|ENSMUSG00000108827.4|olfactory receptor 1310
mm39_v1_chr9_-_49710190_49710231	0.310735	Lhx4	ENSMUST00000114476.8|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1	ENSMUST00000193547.6|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1
mm39_v1_chr6_-_141719536_141719536	0.304677	Lhx4	ENSMUST00000148411.2|Gm5724|ENSMUSG00000084927.2|predicted gene 5724
mm39_v1_chr10_-_23112973_23113122	0.299363	Lhx4	ENSMUST00000218049.2|Eya4|ENSMUSG00000010461.17|EYA transcriptional coactivator and phosphatase 4
mm39_v1_chr9_-_49710058_49710172	0.299064	Lhx4	ENSMUST00000192584.2|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1	ENSMUST00000166811.9|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1
mm39_v1_chr10_+_102376109_102376142	0.296123	Lhx4	ENSMUST00000055355.6|Rassf9|ENSMUSG00000044921.6|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
mm39_v1_chr15_+_34453432_34453451	0.294929	Lhx4	ENSMUST00000060894.9|Erich5|ENSMUSG00000044726.9|glutamate rich 5
mm39_v1_chr10_+_101994841_101994940	0.290408	Lhx4	ENSMUST00000020039.13|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr8_+_66964401_66964417	0.29002	Lhx4	ENSMUST00000002025.5|Tktl2|ENSMUSG00000025519.6|transketolase-like 2	ENSMUST00000183187.2|Tktl2|ENSMUSG00000025519.6|transketolase-like 2
mm39_v1_chr5_-_53864595_53864669	0.286611	Lhx4	ENSMUST00000200691.4|Cckar|ENSMUSG00000029193.8|cholecystokinin A receptor
mm39_v1_chr7_+_126575510_126575572	0.286407	Lhx4	ENSMUST00000206780.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chr12_-_118930130_118930156	0.28478	Lhx4	ENSMUST00000035515.5|Abcb5|ENSMUSG00000072791.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5
mm39_v1_chr4_+_146586445_146586484	0.284581	Lhx4	ENSMUST00000105735.9|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981
mm39_v1_chr4_+_134658209_134658221	0.280664	Lhx4	ENSMUST00000030622.3|Syf2|ENSMUSG00000028821.9|SYF2 homolog, RNA splicing factor (S. cerevisiae)
mm39_v1_chr10_+_74872898_74872931	0.279111	Lhx4	ENSMUST00000147802.9|Rab36|ENSMUSG00000020175.16|RAB36, member RAS oncogene family	ENSMUST00000020391.13|Rab36|ENSMUSG00000020175.16|RAB36, member RAS oncogene family	ENSMUST00000234625.2|Rab36|ENSMUSG00000020175.16|RAB36, member RAS oncogene family
mm39_v1_chr5_+_107656810_107656810	0.278992	Lhx4	ENSMUST00000160160.6|Gm42669|ENSMUSG00000106631.3|predicted gene 42669
mm39_v1_chr4_+_148985584_148985660	0.272599	Lhx4	ENSMUST00000147270.2|Casz1|ENSMUSG00000028977.18|castor zinc finger 1
mm39_v1_chr2_+_86122799_86122799	0.270511	Lhx4	ENSMUST00000217166.2|Olfr1052|ENSMUSG00000047149.6|olfactory receptor 1052
mm39_v1_chr12_+_38833501_38833526	0.268539	Lhx4	ENSMUST00000159334.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr14_+_8283087_8283087	0.268284	Lhx4	ENSMUST00000206298.3|Olfr720|ENSMUSG00000052417.7|olfactory receptor 720	ENSMUST00000216079.2|Olfr720|ENSMUSG00000052417.7|olfactory receptor 720
mm39_v1_chr4_+_145311759_145311791	0.26751	Lhx4	ENSMUST00000119718.8|Zfp268|ENSMUSG00000078502.11|zinc finger protein 268
mm39_v1_chr12_+_59060162_59060184	0.265972	Lhx4	ENSMUST00000021379.8|Gemin2|ENSMUSG00000060121.16|gem nuclear organelle associated protein 2
mm39_v1_chr12_+_38833454_38833482	0.263595	Lhx4	ENSMUST00000161980.8|Etv1|ENSMUSG00000004151.18|ets variant 1	ENSMUST00000160701.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr11_+_76795292_76795301	0.262553	Lhx4	ENSMUST00000142166.8|Tmigd1|ENSMUSG00000020839.17|transmembrane and immunoglobulin domain containing 1
mm39_v1_chr16_+_58967409_58967409	0.261724	Lhx4	ENSMUST00000216957.3|Olfr195|ENSMUSG00000062608.6|olfactory receptor 195
mm39_v1_chr5_-_86893645_86893674	0.261017	Lhx4	ENSMUST00000161306.2|Tmprss11e|ENSMUSG00000054537.9|transmembrane protease, serine 11e
mm39_v1_chr2_-_86944911_86944911	0.25991	Lhx4	ENSMUST00000216088.3|Olfr259|ENSMUSG00000075160.4|olfactory receptor 259
mm39_v1_chr12_-_111947487_111947498	0.25792	Lhx4	ENSMUST00000190536.2|Rd3l|ENSMUSG00000091402.8|retinal degeneration 3-like
mm39_v1_chr14_-_110992533_110992584	0.255724	Lhx4	ENSMUST00000078386.4|Slitrk6|ENSMUSG00000045871.6|SLIT and NTRK-like family, member 6
mm39_v1_chr8_+_13919641_13919739	0.251901	Lhx4	ENSMUST00000051870.8|Champ1|ENSMUSG00000047710.9|chromosome alignment maintaining phosphoprotein 1	ENSMUST00000128557.3|Champ1|ENSMUSG00000047710.9|chromosome alignment maintaining phosphoprotein 1
mm39_v1_chr10_-_40178182_40178196	0.248907	Lhx4	ENSMUST00000099945.6|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1	ENSMUST00000238953.2|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1	ENSMUST00000238969.2|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1
mm39_v1_chr2_-_34716083_34716099	0.244618	Lhx4	ENSMUST00000113077.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000028220.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr12_-_111947536_111947547	0.24388	Lhx4	ENSMUST00000185354.2|Rd3l|ENSMUSG00000091402.8|retinal degeneration 3-like
mm39_v1_chr7_+_99808452_99808489	0.243303	Lhx4	ENSMUST00000032967.4|Lipt2|ENSMUSG00000030725.5|lipoyl(octanoyl) transferase 2 (putative)
mm39_v1_chr8_-_79539838_79539904	0.238848	Lhx4	ENSMUST00000146824.2|Lsm6|ENSMUSG00000031683.17|LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chr8_-_62576140_62576157	0.23852	Lhx4	ENSMUST00000034052.14|Anxa10|ENSMUSG00000031635.15|annexin A10	ENSMUST00000034054.9|Anxa10|ENSMUSG00000031635.15|annexin A10
mm39_v1_chr2_-_111965322_111965322	0.237356	Lhx4	ENSMUST00000213696.2|Olfr1316|ENSMUSG00000109801.3|olfactory receptor 1316
mm39_v1_chr3_+_138058139_138058139	0.23711	Lhx4	ENSMUST00000090166.5|Adh6b|ENSMUSG00000074206.8|alcohol dehydrogenase 6B (class V)
mm39_v1_chr2_-_89779008_89779008	0.234445	Lhx4	ENSMUST00000214846.2|Olfr1259|ENSMUSG00000068806.6|olfactory receptor 1259
mm39_v1_chr19_-_24178000_24178016	0.231985	Lhx4	ENSMUST00000233658.3|Tjp2|ENSMUSG00000024812.12|tight junction protein 2
mm39_v1_chr11_+_76795346_76795395	0.230491	Lhx4	ENSMUST00000072633.4|Tmigd1|ENSMUSG00000020839.17|transmembrane and immunoglobulin domain containing 1
mm39_v1_chrX_+_56257374_56257514	0.228161	Lhx4	ENSMUST00000033466.2|Cd40lg|ENSMUSG00000031132.2|CD40 ligand
mm39_v1_chr11_+_31823096_31823275	0.225196	Lhx4	ENSMUST00000155278.2|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr6_-_69282389_69282389	0.221196	Lhx4	ENSMUST00000103350.3|Igkv4-68|ENSMUSG00000076549.3|immunoglobulin kappa variable 4-68
mm39_v1_chr2_-_73284262_73284323	0.220808	Lhx4	ENSMUST00000102679.8|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chr2_-_87570322_87570322	0.218602	Lhx4	ENSMUST00000214573.2|Olfr1138|ENSMUSG00000075149.3|olfactory receptor 1138
mm39_v1_chr14_-_50479161_50479161	0.215101	Lhx4	ENSMUST00000214388.2|Olfr731|ENSMUSG00000048080.3|olfactory receptor 731
mm39_v1_chr4_-_45532470_45532470	0.207742	Lhx4	ENSMUST00000147448.2|Shb|ENSMUSG00000044813.16|src homology 2 domain-containing transforming protein B
mm39_v1_chr4_-_58499398_58499409	0.204265	Lhx4	ENSMUST00000107570.2|Lpar1|ENSMUSG00000038668.15|lysophosphatidic acid receptor 1
mm39_v1_chr4_+_147216495_147216495	0.202526	Lhx4	ENSMUST00000084149.10|Zfp991|ENSMUSG00000067916.10|zinc finger protein 991
mm39_v1_chr16_-_26786995_26786995	0.201911	Lhx4	ENSMUST00000231969.2|Gmnc|ENSMUSG00000068428.8|geminin coiled-coil domain containing
mm39_v1_chr2_-_86257093_86257093	0.201699	Lhx4	ENSMUST00000217481.2|Olfr1062|ENSMUSG00000090059.5|olfactory receptor 1062
mm39_v1_chr19_-_55229668_55229668	0.201547	Lhx4	ENSMUST00000069183.8|Gucy2g|ENSMUSG00000055523.8|guanylate cyclase 2g
mm39_v1_chr13_-_52685305_52685321	0.20066	Lhx4	ENSMUST00000057442.8|Diras2|ENSMUSG00000047842.8|DIRAS family, GTP-binding RAS-like 2
mm39_v1_chr7_+_99808526_99808566	0.200052	Lhx4	ENSMUST00000207825.2|Lipt2|ENSMUSG00000030725.5|lipoyl(octanoyl) transferase 2 (putative)
mm39_v1_chr17_+_29493113_29493136	0.199431	Lhx4	ENSMUST00000234326.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004	ENSMUST00000235117.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr10_-_130230201_130230201	0.19663	Lhx4	ENSMUST00000094502.6|Vmn2r84|ENSMUSG00000070601.6|vomeronasal 2, receptor 84	ENSMUST00000233146.2|Vmn2r84|ENSMUSG00000070601.6|vomeronasal 2, receptor 84
mm39_v1_chr6_-_136899167_136899196	0.196438	Lhx4	ENSMUST00000032343.7|Erp27|ENSMUSG00000030219.14|endoplasmic reticulum protein 27
mm39_v1_chr2_+_85648823_85648823	0.195225	Lhx4	ENSMUST00000214416.2|Olfr1018|ENSMUSG00000043892.4|olfactory receptor 1018
mm39_v1_chr4_+_11558905_11558979	0.193552	Lhx4	ENSMUST00000095145.12|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)	ENSMUST00000108306.9|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)	ENSMUST00000070755.13|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)
mm39_v1_chr9_-_103569984_103570011	0.192589	Lhx4	ENSMUST00000049452.15|Tmem108|ENSMUSG00000042757.17|transmembrane protein 108
mm39_v1_chr14_+_47710574_47710596	0.192374	Lhx4	ENSMUST00000228740.2|Fbxo34|ENSMUSG00000037536.15|F-box protein 34
mm39_v1_chr17_+_17622934_17622970	0.188421	Lhx4	ENSMUST00000115576.3|Lix1|ENSMUSG00000047786.13|limb and CNS expressed 1
mm39_v1_chr14_+_8282925_8282925	0.187662	Lhx4	ENSMUST00000217642.2|Olfr720|ENSMUSG00000052417.7|olfactory receptor 720
mm39_v1_chr2_-_79287095_79287102	0.186137	Lhx4	ENSMUST00000041099.5|Neurod1|ENSMUSG00000034701.10|neurogenic differentiation 1
mm39_v1_chr14_-_104760051_104760143	0.183818	Lhx4	ENSMUST00000022716.4|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000228448.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000227640.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1
mm39_v1_chr11_-_73348284_73348334	0.180193	Lhx4	ENSMUST00000121209.3|Olfr380|ENSMUSG00000072709.4|olfactory receptor 380	ENSMUST00000127789.3|Olfr380|ENSMUSG00000072709.4|olfactory receptor 380
mm39_v1_chr9_+_108216233_108216269	0.174821	Lhx4	ENSMUST00000082429.8|Gpx1|ENSMUSG00000063856.9|glutathione peroxidase 1
mm39_v1_chr8_-_126296495_126296573	0.174595	Lhx4	ENSMUST00000212168.2|Sipa1l2|ENSMUSG00000001995.10|signal-induced proliferation-associated 1 like 2	ENSMUST00000212987.2|Sipa1l2|ENSMUSG00000001995.10|signal-induced proliferation-associated 1 like 2
mm39_v1_chr10_+_101994719_101994750	0.174221	Lhx4	ENSMUST00000138522.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C	ENSMUST00000163753.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C	ENSMUST00000138016.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr17_+_29493049_29493104	0.173658	Lhx4	ENSMUST00000149405.4|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr2_-_88562710_88562710	0.173277	Lhx4	ENSMUST00000213118.2|Olfr1197|ENSMUSG00000075119.3|olfactory receptor 1197
mm39_v1_chr19_-_12313274_12313274	0.169315	Lhx4	ENSMUST00000208398.3|Olfr1438-ps1|ENSMUSG00000109328.3|olfactory receptor 1438, pseudogene 1
mm39_v1_chr11_-_99433984_99434048	0.168317	Lhx4	ENSMUST00000107443.8|Krt40|ENSMUSG00000059169.10|keratin 40	ENSMUST00000074253.4|Krt40|ENSMUSG00000059169.10|keratin 40
mm39_v1_chr11_+_62737887_62737913	0.167146	Lhx4	ENSMUST00000036085.11|Fbxw10|ENSMUSG00000090173.9|F-box and WD-40 domain protein 10
mm39_v1_chr4_-_147894245_147894297	0.166025	Lhx4	ENSMUST00000105734.10|Zfp984|ENSMUSG00000078495.11|zinc finger protein 984	ENSMUST00000176201.2|Gm20707|ENSMUSG00000093594.2|predicted gene 20707
mm39_v1_chr3_-_96359622_96359622	0.165954	Lhx4	ENSMUST00000093126.11|BC107364|ENSMUSG00000046317.15|cDNA sequence BC107364	ENSMUST00000098841.4|BC107364|ENSMUSG00000046317.15|cDNA sequence BC107364
mm39_v1_chr11_+_58062467_58062514	0.1651	Lhx4	ENSMUST00000020820.2|Mrpl22|ENSMUSG00000020514.9|mitochondrial ribosomal protein L22
mm39_v1_chr1_-_4430481_4430537	0.161932	Lhx4	ENSMUST00000027032.6|Rp1|ENSMUSG00000025900.14|retinitis pigmentosa 1 (human)
mm39_v1_chr14_+_53994813_53994813	0.158758	Lhx4	ENSMUST00000180380.3|Trav13-4-dv7|ENSMUSG00000094562.6|T cell receptor alpha variable 13-4-DV7
mm39_v1_chr4_+_145397238_145397255	0.155431	Lhx4	ENSMUST00000105738.9|Zfp980|ENSMUSG00000058186.14|zinc finger protein 980
mm39_v1_chr6_+_29859685_29859709	0.15406	Lhx4	ENSMUST00000134438.2|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr7_+_84562283_84562297	0.153928	Lhx4	ENSMUST00000216367.2|Olfr290|ENSMUSG00000070459.7|olfactory receptor 290	ENSMUST00000214501.3|Olfr290|ENSMUSG00000070459.7|olfactory receptor 290
mm39_v1_chr19_-_13828056_13828056	0.15177	Lhx4	ENSMUST00000208493.3|Olfr1501|ENSMUSG00000057270.4|olfactory receptor 1501
mm39_v1_chr14_+_27598021_27598061	0.15174	Lhx4	ENSMUST00000211684.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000210924.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr15_+_16778187_16778187	0.150366	Lhx4	ENSMUST00000026432.8|Cdh9|ENSMUSG00000025370.8|cadherin 9
mm39_v1_chr11_+_62737936_62737960	0.150249	Lhx4	ENSMUST00000150989.8|Fbxw10|ENSMUSG00000090173.9|F-box and WD-40 domain protein 10	ENSMUST00000176577.2|Fbxw10|ENSMUSG00000090173.9|F-box and WD-40 domain protein 10
mm39_v1_chr6_+_29859660_29859684	0.148154	Lhx4	ENSMUST00000128927.9|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr19_-_45224251_45224251	0.148091	Lhx4	ENSMUST00000099401.6|Lbx1|ENSMUSG00000025216.10|ladybird homeobox 1
mm39_v1_chrX_-_74621828_74621854	0.145417	Lhx4	ENSMUST00000033545.6|Rab39b|ENSMUSG00000031202.6|RAB39B, member RAS oncogene family
mm39_v1_chr5_+_13448833_13448964	0.145215	Lhx4	ENSMUST00000137798.10|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr1_-_165462020_165462110	0.144457	Lhx4	ENSMUST00000194437.6|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000068705.13|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000111435.9|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000193023.2|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1
mm39_v1_chr2_+_85545763_85545763	0.144309	Lhx4	ENSMUST00000216443.3|Olfr1009|ENSMUSG00000043226.6|olfactory receptor 1009
mm39_v1_chr7_+_107679062_107679062	0.143526	Lhx4	ENSMUST00000213601.2|Olfr481|ENSMUSG00000054236.7|olfactory receptor 481
mm39_v1_chr17_+_29493157_29493178	0.142707	Lhx4	ENSMUST00000234234.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr18_+_57601541_57601614	0.142697	Lhx4	ENSMUST00000091892.4|Ctxn3|ENSMUSG00000069372.4|cortexin 3	ENSMUST00000209782.2|Ctxn3|ENSMUSG00000069372.4|cortexin 3
mm39_v1_chr15_-_56557920_56557950	0.141211	Lhx4	ENSMUST00000050544.8|Has2|ENSMUSG00000022367.8|hyaluronan synthase 2
mm39_v1_chr6_-_145811028_145811085	0.14077	Lhx4	ENSMUST00000111703.2|Bhlhe41|ENSMUSG00000030256.12|basic helix-loop-helix family, member e41
mm39_v1_chr2_+_111084861_111084861	0.140138	Lhx4	ENSMUST00000218065.2|Olfr1276|ENSMUSG00000063844.6|olfactory receptor 1276
mm39_v1_chr9_-_19275301_19275301	0.139413	Lhx4	ENSMUST00000214810.2|Olfr846|ENSMUSG00000058692.5|olfactory receptor 846
mm39_v1_chr16_-_92196954_92196971	0.135377	Lhx4	ENSMUST00000023672.10|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1
mm39_v1_chr4_+_146695418_146695418	0.1345	Lhx4	ENSMUST00000130825.8|Zfp993|ENSMUSG00000063245.12|zinc finger protein 993
mm39_v1_chr17_+_70829050_70829139	0.133491	Lhx4	ENSMUST00000133717.9|Dlgap1|ENSMUSG00000003279.18|DLG associated protein 1	ENSMUST00000148486.8|Dlgap1|ENSMUSG00000003279.18|DLG associated protein 1
mm39_v1_chr10_+_87041814_87041860	0.13075	Lhx4	ENSMUST00000189775.2|1700113H08Rik|ENSMUSG00000047129.12|RIKEN cDNA 1700113H08 gene
mm39_v1_chr2_-_87504008_87504008	0.130275	Lhx4	ENSMUST00000213835.2|Olfr1135|ENSMUSG00000075153.3|olfactory receptor 1135
mm39_v1_chr8_+_121854566_121854679	0.129475	Lhx4	ENSMUST00000181609.2|Foxl1|ENSMUSG00000097084.2|forkhead box L1
mm39_v1_chr19_-_13827773_13827773	0.125745	Lhx4	ENSMUST00000215350.2|Olfr1501|ENSMUSG00000057270.4|olfactory receptor 1501
mm39_v1_chr10_+_115979787_115979808	0.124378	Lhx4	ENSMUST00000105271.9|Ptprr|ENSMUSG00000020151.17|protein tyrosine phosphatase, receptor type, R
mm39_v1_chr10_+_129601351_129601351	0.122984	Lhx4	ENSMUST00000203236.3|Olfr808|ENSMUSG00000049894.4|olfactory receptor 808
mm39_v1_chr2_-_7400690_7400735	0.122979	Lhx4	ENSMUST00000182404.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr6_+_96092230_96092292	0.122462	Lhx4	ENSMUST00000075080.6|Tafa1|ENSMUSG00000059187.13|TAFA chemokine like family member 1
mm39_v1_chr4_+_147637714_147637796	0.120826	Lhx4	ENSMUST00000139784.8|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985	ENSMUST00000143885.8|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985	ENSMUST00000081742.7|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985
mm39_v1_chr5_+_13448647_13448663	0.120299	Lhx4	ENSMUST00000125629.8|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr17_-_14914484_14914503	0.116799	Lhx4	ENSMUST00000170872.3|Thbs2|ENSMUSG00000023885.10|thrombospondin 2
mm39_v1_chr4_+_147390131_147390131	0.115748	Lhx4	ENSMUST00000148762.4|Zfp988|ENSMUSG00000078498.6|zinc finger protein 988
mm39_v1_chr4_+_145311722_145311736	0.11504	Lhx4	ENSMUST00000105739.8|Zfp268|ENSMUSG00000078502.11|zinc finger protein 268
mm39_v1_chr7_-_102540089_102540089	0.114398	Lhx4	ENSMUST00000217024.2|Olfr569|ENSMUSG00000062142.6|olfactory receptor 569
mm39_v1_chr5_-_120750623_120750668	0.114035	Lhx4	ENSMUST00000140554.2|Rita1|ENSMUSG00000029600.11|RBPJ interacting and tubulin associated 1	ENSMUST00000031599.9|Rita1|ENSMUSG00000029600.11|RBPJ interacting and tubulin associated 1	ENSMUST00000177800.8|Rita1|ENSMUSG00000029600.11|RBPJ interacting and tubulin associated 1
mm39_v1_chr4_+_147056433_147056433	0.113161	Lhx4	ENSMUST00000146688.3|Zfp989|ENSMUSG00000086147.3|zinc finger protein 989
mm39_v1_chr15_+_81629258_81629333	0.111974	Lhx4	ENSMUST00000109554.3|Zc3h7b|ENSMUSG00000022390.12|zinc finger CCCH type containing 7B	ENSMUST00000230946.2|Zc3h7b|ENSMUSG00000022390.12|zinc finger CCCH type containing 7B
mm39_v1_chr6_-_69584812_69584840	0.111548	Lhx4	ENSMUST00000103359.3|Igkv4-55|ENSMUSG00000096833.3|immunoglobulin kappa variable 4-55
mm39_v1_chr2_+_87078357_87078382	0.111447	Lhx4	ENSMUST00000214119.2|Olfr1115|ENSMUSG00000070856.6|olfactory receptor 1115	ENSMUST00000217196.3|Olfr1115|ENSMUSG00000070856.6|olfactory receptor 1115	ENSMUST00000213513.2|Olfr1115|ENSMUSG00000070856.6|olfactory receptor 1115
mm39_v1_chrX_-_142716085_142716149	0.111038	Lhx4	ENSMUST00000087313.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr11_+_58311921_58311948	0.109495	Lhx4	ENSMUST00000013797.3|1810065E05Rik|ENSMUSG00000013653.3|RIKEN cDNA 1810065E05 gene
mm39_v1_chr6_-_128252540_128252540	0.108014	Lhx4	ENSMUST00000130454.8|Tead4|ENSMUSG00000030353.16|TEA domain family member 4
mm39_v1_chr5_+_20112704_20112764	0.104587	Lhx4	ENSMUST00000115267.7|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm39_v1_chr18_-_64649620_64649723	0.104242	Lhx4	ENSMUST00000025483.11|Nars|ENSMUSG00000024587.11|asparaginyl-tRNA synthetase	ENSMUST00000237400.2|Nars|ENSMUSG00000024587.11|asparaginyl-tRNA synthetase
mm39_v1_chr1_+_179938904_179938904	0.10409	Lhx4	ENSMUST00000145181.2|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr10_-_63926044_63926076	0.103916	Lhx4	ENSMUST00000105439.2|Lrrtm3|ENSMUSG00000042846.9|leucine rich repeat transmembrane neuronal 3
mm39_v1_chr2_+_85804239_85804239	0.10324	Lhx4	ENSMUST00000217244.2|Olfr1029|ENSMUSG00000059873.5|olfactory receptor 1029
mm39_v1_chr10_+_79746690_79746690	0.102371	Lhx4	ENSMUST00000181321.2|Gm26602|ENSMUSG00000097854.2|predicted gene, 26602
mm39_v1_chr7_-_11414074_11414074	0.101021	Lhx4	ENSMUST00000227010.2|Vmn1r72|ENSMUSG00000095430.4|vomeronasal 1 receptor 72	ENSMUST00000209638.3|Vmn1r72|ENSMUSG00000095430.4|vomeronasal 1 receptor 72
mm39_v1_chr4_-_3938352_3938401	0.0993903	Lhx4	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr3_+_53752507_53752507	0.0984314	Lhx4	ENSMUST00000108014.2|Gm10985|ENSMUSG00000078742.2|predicted gene 10985
mm39_v1_chr8_+_22329942_22329942	0.0969941	Lhx4	ENSMUST00000006745.4|Defb2|ENSMUSG00000006570.4|defensin beta 2
mm39_v1_chr10_-_23226684_23226731	0.0963352	Lhx4	ENSMUST00000220299.2|Eya4|ENSMUSG00000010461.17|EYA transcriptional coactivator and phosphatase 4
mm39_v1_chr9_+_108216433_108216450	0.0936905	Lhx4	ENSMUST00000191997.2|Gpx1|ENSMUSG00000063856.9|glutathione peroxidase 1
mm39_v1_chr10_+_112151245_112151245	0.092741	Lhx4	ENSMUST00000218445.2|Kcnc2|ENSMUSG00000035681.8|potassium voltage gated channel, Shaw-related subfamily, member 2
mm39_v1_chr11_-_99265721_99265735	0.0925871	Lhx4	ENSMUST00000006963.3|Krt28|ENSMUSG00000055937.2|keratin 28
mm39_v1_chr16_-_4031814_4031861	0.0924538	Lhx4	ENSMUST00000023165.9|Crebbp|ENSMUSG00000022521.11|CREB binding protein
mm39_v1_chr7_+_79939747_79939756	0.0912808	Lhx4	ENSMUST00000205864.2|Vps33b|ENSMUSG00000030534.14|vacuolar protein sorting 33B
mm39_v1_chr1_+_72323526_72323579	0.0905209	Lhx4	ENSMUST00000027380.12|Tmem169|ENSMUSG00000026188.12|transmembrane protein 169	ENSMUST00000141783.2|Tmem169|ENSMUSG00000026188.12|transmembrane protein 169
mm39_v1_chr5_+_20112500_20112549	0.0897896	Lhx4	ENSMUST00000101558.10|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm39_v1_chr2_+_61634797_61634890	0.0896328	Lhx4	ENSMUST00000048934.15|Tbr1|ENSMUSG00000035033.16|T-box brain transcription factor 1
mm39_v1_chr5_-_83502966_83503042	0.0886231	Lhx4	ENSMUST00000053543.11|Tecrl|ENSMUSG00000049537.11|trans-2,3-enoyl-CoA reductase-like
mm39_v1_chr4_-_147787010_147787010	0.0883724	Lhx4	ENSMUST00000117638.2|Zfp534|ENSMUSG00000062518.8|zinc finger protein 534
mm39_v1_chr2_-_88768449_88768455	0.0883535	Lhx4	ENSMUST00000215205.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211	ENSMUST00000213412.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211
mm39_v1_chr7_+_126575781_126576025	0.0882288	Lhx4	ENSMUST00000206450.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	ENSMUST00000205830.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chr16_-_16647139_16647215	0.0877919	Lhx4	ENSMUST00000023468.6|Spag6l|ENSMUSG00000022783.12|sperm associated antigen 6-like
mm39_v1_chr2_-_88745501_88745501	0.0860618	Lhx4	ENSMUST00000213136.2|Olfr1209|ENSMUSG00000075113.3|olfactory receptor 1209
mm39_v1_chr16_-_74208180_74208314	0.0855642	Lhx4	ENSMUST00000117200.8|Robo2|ENSMUSG00000052516.20|roundabout guidance receptor 2
mm39_v1_chr14_-_8146867_8146935	0.0848396	Lhx4	ENSMUST00000217035.2|Olfr31|ENSMUSG00000072707.4|olfactory receptor 31	ENSMUST00000206009.3|Olfr31|ENSMUSG00000072707.4|olfactory receptor 31
mm39_v1_chr6_-_138404076_138404160	0.0842506	Lhx4	ENSMUST00000203435.3|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chrX_+_110920704_110920704	0.083826	Lhx4	ENSMUST00000131304.2|Tex16|ENSMUSG00000034555.15|testis expressed gene 16
mm39_v1_chr14_+_50944830_50944830	0.0830838	Lhx4	ENSMUST00000213101.2|Olfr748|ENSMUSG00000060084.5|olfactory receptor 748
mm39_v1_chr8_+_40807344_40807344	0.0826325	Lhx4	ENSMUST00000136835.2|Micu3|ENSMUSG00000039478.16|mitochondrial calcium uptake family, member 3
mm39_v1_chr14_-_50586329_50586329	0.0823089	Lhx4	ENSMUST00000216634.2|Olfr735|ENSMUSG00000046210.8|olfactory receptor 735
mm39_v1_chr14_-_96756503_96756538	0.0815037	Lhx4	ENSMUST00000022666.9|Klhl1|ENSMUSG00000022076.11|kelch-like 1
mm39_v1_chr10_-_130291919_130291919	0.0805552	Lhx4	ENSMUST00000170257.4|Vmn2r86|ENSMUSG00000092162.4|vomeronasal 2, receptor 86
mm39_v1_chr16_-_74208395_74208431	0.0797764	Lhx4	ENSMUST00000227347.2|Robo2|ENSMUSG00000052516.20|roundabout guidance receptor 2
mm39_v1_chr6_+_136495784_136495808	0.0795738	Lhx4	ENSMUST00000032335.13|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein	ENSMUST00000185724.7|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr2_-_7400997_7401052	0.0789611	Lhx4	ENSMUST00000137733.9|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr19_+_46385448_46385473	0.0784823	Lhx4	ENSMUST00000118440.3|Sufu|ENSMUSG00000025231.18|SUFU negative regulator of hedgehog signaling
mm39_v1_chr14_+_53599724_53599724	0.0781654	Lhx4	ENSMUST00000196105.2|Trav13n-4|ENSMUSG00000076823.4|T cell receptor alpha variable 13N-4
mm39_v1_chr18_-_31450095_31450186	0.0780575	Lhx4	ENSMUST00000139924.2|Rit2|ENSMUSG00000057455.13|Ras-like without CAAX 2	ENSMUST00000153060.8|Rit2|ENSMUSG00000057455.13|Ras-like without CAAX 2
mm39_v1_chrX_-_142716200_142716307	0.0773686	Lhx4	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr2_-_88058678_88058678	0.0773292	Lhx4	ENSMUST00000214386.2|Olfr1170|ENSMUSG00000075133.3|olfactory receptor 1170
mm39_v1_chr2_-_111820618_111820626	0.0763051	Lhx4	ENSMUST00000216948.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309	ENSMUST00000214935.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309	ENSMUST00000217452.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309	ENSMUST00000215045.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309
mm39_v1_chr5_-_70999547_70999681	0.0726719	Lhx4	ENSMUST00000199705.2|Gabrg1|ENSMUSG00000001260.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm39_v1_chr6_+_30611028_30611050	0.0723314	Lhx4	ENSMUST00000115138.8|Cpa5|ENSMUSG00000029788.14|carboxypeptidase A5
mm39_v1_chr17_+_37978659_37978659	0.071652	Lhx4	ENSMUST00000216551.2|Olfr118|ENSMUSG00000080990.3|olfactory receptor 118
mm39_v1_chr6_+_30610973_30611024	0.0707641	Lhx4	ENSMUST00000062758.11|Cpa5|ENSMUSG00000029788.14|carboxypeptidase A5
mm39_v1_chr9_+_113641615_113641685	0.0698213	Lhx4	ENSMUST00000111838.10|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000166734.10|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000214522.2|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2	ENSMUST00000163895.3|Clasp2|ENSMUSG00000033392.17|CLIP associating protein 2
mm39_v1_chr7_-_9839668_9839668	0.0682049	Lhx4	ENSMUST00000094863.6|Vmn2r51|ENSMUSG00000058685.8|vomeronasal 2, receptor 51
mm39_v1_chr7_+_26456567_26456596	0.0676146	Lhx4	ENSMUST00000077855.8|Cyp2b19|ENSMUSG00000066704.7|cytochrome P450, family 2, subfamily b, polypeptide 19
mm39_v1_chr8_-_65440298_65440298	0.0662009	Lhx4	ENSMUST00000095295.3|Trim75|ENSMUSG00000071089.4|tripartite motif-containing 75
mm39_v1_chr2_+_87185159_87185159	0.0660438	Lhx4	ENSMUST00000215163.3|Olfr1120|ENSMUSG00000081234.4|olfactory receptor 1120
mm39_v1_chr1_-_9368721_9368798	0.0639087	Lhx4	ENSMUST00000132064.8|Sntg1|ENSMUSG00000025909.17|syntrophin, gamma 1
mm39_v1_chr14_+_54032814_54032814	0.062912	Lhx4	ENSMUST00000103671.4|Trav13-5|ENSMUSG00000087666.4|T cell receptor alpha variable 13-5
mm39_v1_chr6_+_34006356_34006401	0.0619971	Lhx4	ENSMUST00000228187.2|Lrguk|ENSMUSG00000056215.14|leucine-rich repeats and guanylate kinase domain containing	ENSMUST00000070189.10|Lrguk|ENSMUSG00000056215.14|leucine-rich repeats and guanylate kinase domain containing	ENSMUST00000101564.9|Lrguk|ENSMUSG00000056215.14|leucine-rich repeats and guanylate kinase domain containing
mm39_v1_chr7_-_126574959_126575095	0.0606429	Lhx4	ENSMUST00000206296.2|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand	ENSMUST00000205437.3|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand
mm39_v1_chr2_-_86317730_86317730	0.0595675	Lhx4	ENSMUST00000217292.3|Olfr228|ENSMUSG00000111772.3|olfactory receptor 228
mm39_v1_chr9_-_71803354_71803393	0.0580612	Lhx4	ENSMUST00000184448.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12
mm39_v1_chr2_-_73410632_73410697	0.0566239	Lhx4	ENSMUST00000028515.4|Chrna1|ENSMUSG00000027107.4|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm39_v1_chr2_+_87137925_87137925	0.0561133	Lhx4	ENSMUST00000216396.3|Olfr1118|ENSMUSG00000083706.4|olfactory receptor 1118
mm39_v1_chr8_+_111345209_111345251	0.0548394	Lhx4	ENSMUST00000034190.11|Vac14|ENSMUSG00000010936.12|Vac14 homolog (S. cerevisiae)
mm39_v1_chr7_+_66489465_66489499	0.0538082	Lhx4	ENSMUST00000098382.10|Adamts17|ENSMUSG00000058145.17|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm39_v1_chr3_+_55689921_55689940	0.0537429	Lhx4	ENSMUST00000075422.6|Mab21l1|ENSMUSG00000056947.6|mab-21-like 1
mm39_v1_chr4_+_107747010_107747105	0.0533169	Lhx4	ENSMUST00000135454.8|Czib|ENSMUSG00000028608.16|CXXC motif containing zinc binding protein	ENSMUST00000106726.10|Czib|ENSMUSG00000028608.16|CXXC motif containing zinc binding protein	ENSMUST00000106727.10|Czib|ENSMUSG00000028608.16|CXXC motif containing zinc binding protein	ENSMUST00000119394.8|Czib|ENSMUSG00000028608.16|CXXC motif containing zinc binding protein	ENSMUST00000120473.8|Czib|ENSMUSG00000028608.16|CXXC motif containing zinc binding protein	ENSMUST00000125107.8|Czib|ENSMUSG00000028608.16|CXXC motif containing zinc binding protein	ENSMUST00000128474.2|Czib|ENSMUSG00000028608.16|CXXC motif containing zinc binding protein
mm39_v1_chr11_+_73489420_73489420	0.0528712	Lhx4	ENSMUST00000214228.2|Olfr384|ENSMUSG00000060335.3|olfactory receptor 384
mm39_v1_chrX_+_111404963_111404978	0.051886	Lhx4	ENSMUST00000026602.9|2010106E10Rik|ENSMUSG00000025528.11|RIKEN cDNA 2010106E10 gene	ENSMUST00000113412.3|2010106E10Rik|ENSMUSG00000025528.11|RIKEN cDNA 2010106E10 gene
mm39_v1_chr7_-_9687512_9687512	0.0517517	Lhx4	ENSMUST00000165611.2|Vmn2r48|ENSMUSG00000095914.2|vomeronasal 2, receptor 48
mm39_v1_chr4_-_146993984_146994047	0.0507853	Lhx4	ENSMUST00000238583.2|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411	ENSMUST00000049821.4|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411
mm39_v1_chr16_-_55103598_55103603	0.0504891	Lhx4	ENSMUST00000036412.4|Zpld1|ENSMUSG00000064310.11|zona pellucida like domain containing 1
mm39_v1_chrX_-_133012457_133012537	0.0499096	Lhx4	ENSMUST00000159259.3|Nox1|ENSMUSG00000031257.15|NADPH oxidase 1	ENSMUST00000113275.10|Nox1|ENSMUSG00000031257.15|NADPH oxidase 1
mm39_v1_chr14_-_48902555_48902572	0.0498721	Lhx4	ENSMUST00000118578.9|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr15_-_101422054_101422054	0.0498041	Lhx4	ENSMUST00000230067.3|Gm49425|ENSMUSG00000116336.3|predicted gene, 49425
mm39_v1_chr18_+_37827413_37827444	0.0497787	Lhx4	ENSMUST00000193414.2|Pcdhga5|ENSMUSG00000103567.2|protocadherin gamma subfamily A, 5
mm39_v1_chr19_-_39801188_39801258	0.0493147	Lhx4	ENSMUST00000162507.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000160476.9|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000239028.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40
mm39_v1_chr13_+_67980849_67980849	0.0481668	Lhx4	ENSMUST00000221620.2|Gm10037|ENSMUSG00000058246.9|predicted gene 10037
mm39_v1_chr9_-_40015750_40015750	0.0481078	Lhx4	ENSMUST00000213858.2|Olfr984|ENSMUSG00000045812.6|olfactory receptor 984
mm39_v1_chr8_-_22396428_22396453	0.0478802	Lhx4	ENSMUST00000051965.5|Defb11|ENSMUSG00000045337.5|defensin beta 11
mm39_v1_chr5_-_99091681_99091717	0.0466781	Lhx4	ENSMUST00000162619.8|Prkg2|ENSMUSG00000029334.15|protein kinase, cGMP-dependent, type II	ENSMUST00000162147.6|Prkg2|ENSMUSG00000029334.15|protein kinase, cGMP-dependent, type II
mm39_v1_chr2_-_88994435_88994435	0.0465995	Lhx4	ENSMUST00000099793.3|Olfr1224-ps1|ENSMUSG00000075099.3|olfactory receptor 1224, pseudogene 1
mm39_v1_chr11_+_115225557_115225675	0.046545	Lhx4	ENSMUST00000106543.8|Otop3|ENSMUSG00000018862.12|otopetrin 3	ENSMUST00000019006.5|Otop3|ENSMUSG00000018862.12|otopetrin 3
mm39_v1_chr9_+_38491474_38491474	0.0453683	Lhx4	ENSMUST00000217160.3|Olfr912|ENSMUSG00000111448.3|olfactory receptor 912
mm39_v1_chr2_+_88644840_88644840	0.0444947	Lhx4	ENSMUST00000214703.2|Olfr1202|ENSMUSG00000064084.3|olfactory receptor 1202
mm39_v1_chr9_+_118307412_118307519	0.0443869	Lhx4	ENSMUST00000035020.15|Eomes|ENSMUSG00000032446.15|eomesodermin
mm39_v1_chr6_+_43083303_43083303	0.0438363	Lhx4	ENSMUST00000213649.2|Olfr441|ENSMUSG00000094669.4|olfactory receptor 441
mm39_v1_chr12_-_103660916_103660931	0.0431376	Lhx4	ENSMUST00000117053.8|Serpina1f|ENSMUSG00000021081.13|serine (or cysteine) peptidase inhibitor, clade A, member 1F
mm39_v1_chr4_+_145237329_145237361	0.0430011	Lhx4	ENSMUST00000105742.8|Zfp990|ENSMUSG00000078503.10|zinc finger protein 990	ENSMUST00000136309.8|Zfp990|ENSMUSG00000078503.10|zinc finger protein 990
mm39_v1_chr13_+_93441307_93441443	0.0413586	Lhx4	ENSMUST00000080127.12|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr2_+_89757653_89757663	0.0407897	Lhx4	ENSMUST00000213720.3|Olfr1258|ENSMUSG00000049149.10|olfactory receptor 1258	ENSMUST00000102609.3|Olfr1258|ENSMUSG00000049149.10|olfactory receptor 1258
mm39_v1_chr4_+_146599377_146599446	0.0395061	Lhx4	ENSMUST00000140089.7|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981	ENSMUST00000179175.3|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981
mm39_v1_chr5_-_86475595_86475615	0.0378829	Lhx4	ENSMUST00000122377.2|Tmprss11d|ENSMUSG00000061259.12|transmembrane protease, serine 11d
mm39_v1_chr12_-_73093953_73093953	0.037836	Lhx4	ENSMUST00000050029.8|Six1|ENSMUSG00000051367.9|sine oculis-related homeobox 1
mm39_v1_chr19_-_5040344_5040344	0.036595	Lhx4	ENSMUST00000056129.9|Npas4|ENSMUSG00000045903.10|neuronal PAS domain protein 4
mm39_v1_chr10_-_18662526_18662541	0.0348843	Lhx4	ENSMUST00000216654.2|Gm4922|ENSMUSG00000044624.8|predicted gene 4922
mm39_v1_chr11_+_46641330_46641362	0.034845	Lhx4	ENSMUST00000109223.8|Havcr1|ENSMUSG00000040405.14|hepatitis A virus cellular receptor 1
mm39_v1_chr2_-_89678487_89678487	0.0342607	Lhx4	ENSMUST00000214428.3|Olfr48|ENSMUSG00000075072.4|olfactory receptor 48
mm39_v1_chr7_-_103427550_103427550	0.0337943	Lhx4	ENSMUST00000072513.4|Olfr68|ENSMUSG00000061626.7|olfactory receptor 68
mm39_v1_chr2_-_89491560_89491560	0.0331291	Lhx4	ENSMUST00000111527.4|Olfr1250|ENSMUSG00000075078.6|olfactory receptor 1250
mm39_v1_chr7_+_126575752_126575770	0.0328159	Lhx4	ENSMUST00000206346.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chrX_-_159689993_159690048	0.032403	Lhx4	ENSMUST00000069417.6|Gja6|ENSMUSG00000055691.6|gap junction protein, alpha 6
mm39_v1_chr7_-_8164653_8164653	0.0318898	Lhx4	ENSMUST00000168807.3|Vmn2r41|ENSMUSG00000090892.3|vomeronasal 2, receptor 41
mm39_v1_chr19_-_13807805_13807845	0.031807	Lhx4	ENSMUST00000214475.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000067670.5|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000219674.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000216287.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000215760.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500
mm39_v1_chr2_-_7400780_7400842	0.0315252	Lhx4	ENSMUST00000002176.13|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr13_-_103042554_103042619	0.0315198	Lhx4	ENSMUST00000171791.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr4_+_107111083_107111100	0.0314616	Lhx4	ENSMUST00000106749.8|Hspb11|ENSMUSG00000063172.14|heat shock protein family B (small), member 11
mm39_v1_chr17_-_37430949_37430975	0.030704	Lhx4	ENSMUST00000214994.2|Olfr92|ENSMUSG00000096477.3|olfactory receptor 92	ENSMUST00000216341.2|Olfr92|ENSMUSG00000096477.3|olfactory receptor 92
mm39_v1_chr9_+_108216466_108216484	0.0306848	Lhx4	ENSMUST00000193987.2|Gpx1|ENSMUSG00000063856.9|glutathione peroxidase 1
mm39_v1_chr10_-_130265572_130265572	0.0302704	Lhx4	ENSMUST00000171811.4|Vmn2r85|ENSMUSG00000092048.4|vomeronasal 2, receptor 85
mm39_v1_chr15_-_98118858_98118937	0.0301042	Lhx4	ENSMUST00000142443.8|Gm44579|ENSMUSG00000108748.2|predicted gene 44579	ENSMUST00000170618.8|Olfr287|ENSMUSG00000090129.11|olfactory receptor 287
mm39_v1_chr15_+_102917977_102918011	0.0295837	Lhx4	ENSMUST00000001711.6|Hoxc6|ENSMUSG00000001661.6|homeobox C6
mm39_v1_chr1_-_14380032_14380060	0.0293609	Lhx4	ENSMUST00000187790.2|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr15_-_58261093_58261129	0.0287328	Lhx4	ENSMUST00000227274.3|Anxa13|ENSMUSG00000055114.11|annexin A13
mm39_v1_chr18_+_22478146_22478146	0.0284846	Lhx4	ENSMUST00000120223.8|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3	ENSMUST00000097655.4|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3
mm39_v1_chr8_-_65440483_65440483	0.0282756	Lhx4	ENSMUST00000210982.2|Trim75|ENSMUSG00000071089.4|tripartite motif-containing 75
mm39_v1_chr7_-_104628324_104628333	0.0280792	Lhx4	ENSMUST00000217091.2|Olfr671|ENSMUSG00000094531.4|olfactory receptor 671	ENSMUST00000210963.3|Olfr671|ENSMUSG00000094531.4|olfactory receptor 671
mm39_v1_chr7_+_17979272_17979326	0.0278159	Lhx4	ENSMUST00000066780.5|Mill1|ENSMUSG00000054005.5|MHC I like leukocyte 1
mm39_v1_chr2_-_89491811_89491811	0.0278122	Lhx4	ENSMUST00000215730.3|Olfr1250|ENSMUSG00000075078.6|olfactory receptor 1250
mm39_v1_chr7_+_12946947_12946947	0.0270427	Lhx4	ENSMUST00000226717.2|Vmn1r89|ENSMUSG00000095629.3|vomeronasal 1 receptor 89	ENSMUST00000227176.2|Vmn1r89|ENSMUSG00000095629.3|vomeronasal 1 receptor 89	ENSMUST00000227239.2|Vmn1r89|ENSMUSG00000095629.3|vomeronasal 1 receptor 89	ENSMUST00000227276.2|Vmn1r89|ENSMUSG00000095629.3|vomeronasal 1 receptor 89	ENSMUST00000227319.2|Vmn1r89|ENSMUSG00000095629.3|vomeronasal 1 receptor 89	ENSMUST00000227390.2|Vmn1r89|ENSMUSG00000095629.3|vomeronasal 1 receptor 89	ENSMUST00000228587.2|Vmn1r89|ENSMUSG00000095629.3|vomeronasal 1 receptor 89
mm39_v1_chr4_-_119151717_119151801	0.0264669	Lhx4	ENSMUST00000079644.13|Ybx1|ENSMUSG00000028639.15|Y box protein 1
mm39_v1_chr12_-_104439589_104439633	0.0261749	Lhx4	ENSMUST00000021513.6|Gsc|ENSMUSG00000021095.6|goosecoid homeobox
mm39_v1_chr2_+_71359000_71359027	0.0261072	Lhx4	ENSMUST00000126400.2|Dlx1|ENSMUSG00000041911.4|distal-less homeobox 1
mm39_v1_chr14_+_26414422_26414432	0.0260019	Lhx4	ENSMUST00000022433.12|Dnah12|ENSMUSG00000021879.14|dynein, axonemal, heavy chain 12
mm39_v1_chr17_-_37399343_37399391	0.0244997	Lhx4	ENSMUST00000207101.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90	ENSMUST00000217397.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90	ENSMUST00000215195.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90	ENSMUST00000216488.2|Olfr90|ENSMUSG00000056600.5|olfactory receptor 90
mm39_v1_chr2_-_89555356_89555356	0.024389	Lhx4	ENSMUST00000216203.2|Olfr1252|ENSMUSG00000110819.2|olfactory receptor 1252	ENSMUST00000213196.2|Olfr1252|ENSMUSG00000110819.2|olfactory receptor 1252
mm39_v1_chr4_+_65042411_65042411	0.0230885	Lhx4	ENSMUST00000084501.4|Pappa|ENSMUSG00000028370.8|pregnancy-associated plasma protein A
mm39_v1_chr15_-_93493758_93493795	0.0227402	Lhx4	ENSMUST00000048982.11|Prickle1|ENSMUSG00000036158.13|prickle planar cell polarity protein 1
mm39_v1_chr2_-_112311114_112311114	0.0227246	Lhx4	ENSMUST00000099589.4|Chrm5|ENSMUSG00000074939.4|cholinergic receptor, muscarinic 5
mm39_v1_chr8_-_85389470_85389488	0.0226119	Lhx4	ENSMUST00000060427.6|Ier2|ENSMUSG00000053560.6|immediate early response 2
mm39_v1_chr16_-_19341016_19341016	0.0222872	Lhx4	ENSMUST00000214315.2|Olfr167|ENSMUSG00000045341.3|olfactory receptor 167
mm39_v1_chr4_+_146033882_146033915	0.018604	Lhx4	ENSMUST00000105730.2|Zfp987|ENSMUSG00000066009.9|zinc finger protein 987	ENSMUST00000091878.6|Zfp987|ENSMUSG00000066009.9|zinc finger protein 987
mm39_v1_chr1_-_164988342_164988350	0.0179127	Lhx4	ENSMUST00000027859.12|Tbx19|ENSMUSG00000026572.12|T-box 19
mm39_v1_chr2_-_28806639_28806680	0.0178128	Lhx4	ENSMUST00000113847.3|Barhl1|ENSMUSG00000026805.15|BarH like homeobox 1
mm39_v1_chr5_-_140986312_140986406	0.0177705	Lhx4	ENSMUST00000085786.7|Card11|ENSMUSG00000036526.9|caspase recruitment domain family, member 11
mm39_v1_chr7_-_37469049_37469102	0.0175551	Lhx4	ENSMUST00000175941.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr12_+_38830812_38830847	0.0169017	Lhx4	ENSMUST00000160856.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr9_+_118307250_118307280	0.0168445	Lhx4	ENSMUST00000111763.8|Eomes|ENSMUSG00000032446.15|eomesodermin
mm39_v1_chr5_-_5315968_5316292	0.0162536	Lhx4	ENSMUST00000115451.8|Cdk14|ENSMUSG00000028926.16|cyclin-dependent kinase 14	ENSMUST00000115452.8|Cdk14|ENSMUSG00000028926.16|cyclin-dependent kinase 14	ENSMUST00000131392.8|Cdk14|ENSMUSG00000028926.16|cyclin-dependent kinase 14
mm39_v1_chr5_+_121601212_121601251	0.0156407	Lhx4	ENSMUST00000094357.11|Tmem116|ENSMUSG00000029452.19|transmembrane protein 116	ENSMUST00000031405.12|Tmem116|ENSMUSG00000029452.19|transmembrane protein 116
mm39_v1_chr1_-_9369463_9369531	0.015303	Lhx4	ENSMUST00000140295.8|Sntg1|ENSMUSG00000025909.17|syntrophin, gamma 1
mm39_v1_chr5_-_66672158_66672180	0.0141289	Lhx4	ENSMUST00000161879.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000159357.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2
mm39_v1_chr7_-_8934434_8934434	0.0137992	Lhx4	ENSMUST00000171942.11|Vmn2r40|ENSMUSG00000090864.12|vomeronasal 2, receptor 40
mm39_v1_chr4_+_88768324_88768324	0.0114352	Lhx4	ENSMUST00000094972.2|Ifna1|ENSMUSG00000095498.2|interferon alpha 1
mm39_v1_chr17_+_37977879_37977879	0.0110744	Lhx4	ENSMUST00000215811.2|Olfr118|ENSMUSG00000080990.3|olfactory receptor 118
mm39_v1_chr7_-_9575286_9575286	0.0106225	Lhx4	ENSMUST00000174433.2|Gm10302|ENSMUSG00000096294.2|predicted gene 10302
mm39_v1_chr7_-_9226652_9226652	0.0101897	Lhx4	ENSMUST00000072787.5|Vmn2r37|ENSMUSG00000066828.6|vomeronasal 2, receptor 37
mm39_v1_chr4_+_146098479_146098479	0.00991302	Lhx4	ENSMUST00000131932.2|Zfp600|ENSMUSG00000066007.16|zinc finger protein 600
mm39_v1_chr17_-_37472385_37472385	0.00989383	Lhx4	ENSMUST00000219235.3|Olfr93|ENSMUSG00000091601.6|olfactory receptor 93
mm39_v1_chr2_-_155787197_155787287	0.00971334	Lhx4	ENSMUST00000040162.3|Gdf5|ENSMUSG00000038259.5|growth differentiation factor 5
mm39_v1_chr7_-_103191732_103191732	0.00968834	Lhx4	ENSMUST00000215663.2|Olfr612|ENSMUSG00000094119.4|olfactory receptor 612
mm39_v1_chr2_-_111942878_111942878	0.00941317	Lhx4	ENSMUST00000217078.2|Olfr1315-ps1|ENSMUSG00000109033.3|olfactory receptor 1315, pseudogene 1
mm39_v1_chr7_-_24211879_24211908	0.00902913	Lhx4	ENSMUST00000234781.2|Gm50092|ENSMUSG00000117477.2|predicted gene, 50092
mm39_v1_chr2_+_83554770_83554858	0.00845968	Lhx4	ENSMUST00000141725.3|Itgav|ENSMUSG00000027087.12|integrin alpha V
mm39_v1_chr2_+_181632922_181632922	0.00772377	Lhx4	ENSMUST00000071760.8|Gm14496|ENSMUSG00000098505.4|predicted gene 14496	ENSMUST00000236373.2|Gm14496|ENSMUSG00000098505.4|predicted gene 14496	ENSMUST00000184507.3|Gm14496|ENSMUSG00000098505.4|predicted gene 14496
mm39_v1_chr3_-_141687987_141688025	0.00732619	Lhx4	ENSMUST00000029948.15|Bmpr1b|ENSMUSG00000052430.16|bone morphogenetic protein receptor, type 1B
mm39_v1_chr4_+_102848981_102849034	0.0058147	Lhx4	ENSMUST00000140654.9|Dynlt5|ENSMUSG00000028523.15|dynein light chain Tctex-type 5
mm39_v1_chr16_-_29363671_29363687	0.00537402	Lhx4	ENSMUST00000039090.9|Atp13a4|ENSMUSG00000038094.16|ATPase type 13A4
mm39_v1_chr3_-_59127571_59127680	0.00489013	Lhx4	ENSMUST00000199675.2|P2ry12|ENSMUSG00000036353.14|purinergic receptor P2Y, G-protein coupled 12	ENSMUST00000170388.6|P2ry12|ENSMUSG00000036353.14|purinergic receptor P2Y, G-protein coupled 12
mm39_v1_chr1_+_177272297_177272308	0.00411017	Lhx4	ENSMUST00000193440.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr6_-_129362460_129362472	0.00301885	Lhx4	ENSMUST00000032261.9|Clec12b|ENSMUSG00000030158.13|C-type lectin domain family 12, member B
mm39_v1_chr14_+_53574579_53574579	0.00258844	Lhx4	ENSMUST00000179580.3|Trav13n-3|ENSMUSG00000096038.3|T cell receptor alpha variable 13N-3
mm39_v1_chr1_-_168259839_168259916	0.000649036	Lhx4	ENSMUST00000188912.7|Pbx1|ENSMUSG00000052534.16|pre B cell leukemia homeobox 1
