mm39_v1_chr10_-_123032821_123032868	3.96691	Pknox2_Pknox1	ENSMUST00000219619.2|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15	ENSMUST00000020334.9|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15
mm39_v1_chr7_-_131012202_131012250	3.14449	Pknox2_Pknox1	ENSMUST00000207243.2|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000128432.3|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000121033.8|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000046306.15|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5
mm39_v1_chr11_+_23206001_23206105	2.91278	Pknox2_Pknox1	ENSMUST00000020538.13|Xpo1|ENSMUSG00000020290.15|exportin 1	ENSMUST00000109551.8|Xpo1|ENSMUSG00000020290.15|exportin 1	ENSMUST00000102870.8|Xpo1|ENSMUSG00000020290.15|exportin 1	ENSMUST00000102869.8|Xpo1|ENSMUSG00000020290.15|exportin 1
mm39_v1_chr1_-_66984178_66984302	2.4419	Pknox2_Pknox1	ENSMUST00000027151.12|Myl1|ENSMUSG00000061816.16|myosin, light polypeptide 1
mm39_v1_chr17_-_24360516_24360569	2.25778	Pknox2_Pknox1	ENSMUST00000115411.8|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1	ENSMUST00000115409.9|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1	ENSMUST00000115407.9|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1	ENSMUST00000102927.10|Pdpk1|ENSMUSG00000024122.17|3-phosphoinositide dependent protein kinase 1
mm39_v1_chr9_+_113760002_113760055	2.04387	Pknox2_Pknox1	ENSMUST00000084885.12|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1	ENSMUST00000009885.14|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1
mm39_v1_chr7_-_48530777_48530794	1.90817	Pknox2_Pknox1	ENSMUST00000058745.15|E2f8|ENSMUSG00000046179.18|E2F transcription factor 8
mm39_v1_chr19_-_9876815_9876915	1.79757	Pknox2_Pknox1	ENSMUST00000237147.2|Incenp|ENSMUSG00000024660.10|inner centromere protein	ENSMUST00000025562.9|Incenp|ENSMUSG00000024660.10|inner centromere protein
mm39_v1_chr9_+_113760376_113760722	1.72749	Pknox2_Pknox1	ENSMUST00000214095.2|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1	ENSMUST00000116492.3|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1	ENSMUST00000216558.2|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1
mm39_v1_chr7_-_48531344_48531367	1.72705	Pknox2_Pknox1	ENSMUST00000119223.2|E2f8|ENSMUSG00000046179.18|E2F transcription factor 8
mm39_v1_chr1_-_66984521_66984577	1.62108	Pknox2_Pknox1	ENSMUST00000160100.2|Myl1|ENSMUSG00000061816.16|myosin, light polypeptide 1
mm39_v1_chr19_-_9876745_9876765	1.61697	Pknox2_Pknox1	ENSMUST00000237725.2|Incenp|ENSMUSG00000024660.10|inner centromere protein
mm39_v1_chr5_+_124585244_124585262	1.39954	Pknox2_Pknox1	ENSMUST00000198451.2|Kmt5a|ENSMUSG00000049327.18|lysine methyltransferase 5A
mm39_v1_chr2_+_160487801_160487816	1.34584	Pknox2_Pknox1	ENSMUST00000109468.3|Top1|ENSMUSG00000070544.7|topoisomerase (DNA) I
mm39_v1_chr10_+_7668655_7668700	1.21175	Pknox2_Pknox1	ENSMUST00000015901.11|Ppil4|ENSMUSG00000015757.11|peptidylprolyl isomerase (cyclophilin)-like 4
mm39_v1_chr2_-_132420074_132420153	1.21016	Pknox2_Pknox1	ENSMUST00000110136.8|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1	ENSMUST00000124107.8|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1	ENSMUST00000060955.12|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1
mm39_v1_chr11_-_79971750_79971828	1.15344	Pknox2_Pknox1	ENSMUST00000103233.10|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3	ENSMUST00000061283.15|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3
mm39_v1_chr11_-_4544751_4544820	1.1054	Pknox2_Pknox1	ENSMUST00000109943.10|Mtmr3|ENSMUSG00000034354.18|myotubularin related protein 3
mm39_v1_chr1_+_134110142_134110219	0.978986	Pknox2_Pknox1	ENSMUST00000082060.10|Chil1|ENSMUSG00000064246.11|chitinase-like 1	ENSMUST00000153856.8|Chil1|ENSMUSG00000064246.11|chitinase-like 1	ENSMUST00000133701.8|Chil1|ENSMUSG00000064246.11|chitinase-like 1	ENSMUST00000132873.8|Chil1|ENSMUSG00000064246.11|chitinase-like 1
mm39_v1_chr2_-_132420047_132420073	0.962119	Pknox2_Pknox1	ENSMUST00000028822.14|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1
mm39_v1_chr2_-_132420164_132420175	0.955473	Pknox2_Pknox1	ENSMUST00000110142.8|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1
mm39_v1_chr10_-_63174801_63174821	0.94424	Pknox2_Pknox1	ENSMUST00000020257.13|Sirt1|ENSMUSG00000020063.17|sirtuin 1	ENSMUST00000177694.8|Sirt1|ENSMUSG00000020063.17|sirtuin 1	ENSMUST00000105442.3|Sirt1|ENSMUSG00000020063.17|sirtuin 1
mm39_v1_chrX_-_108056995_108057010	0.937626	Pknox2_Pknox1	ENSMUST00000033597.9|Hmgn5|ENSMUSG00000031245.9|high-mobility group nucleosome binding domain 5
mm39_v1_chr9_-_62888156_62888184	0.893376	Pknox2_Pknox1	ENSMUST00000098651.6|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1	ENSMUST00000214830.2|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1
mm39_v1_chr3_-_108352499_108352537	0.888787	Pknox2_Pknox1	ENSMUST00000090553.12|Sars|ENSMUSG00000068739.14|seryl-aminoacyl-tRNA synthetase	ENSMUST00000153499.2|Sars|ENSMUSG00000068739.14|seryl-aminoacyl-tRNA synthetase
mm39_v1_chr18_+_63841756_63841801	0.884375	Pknox2_Pknox1	ENSMUST00000072726.7|Wdr7|ENSMUSG00000040560.11|WD repeat domain 7	ENSMUST00000235648.2|Wdr7|ENSMUSG00000040560.11|WD repeat domain 7	ENSMUST00000236879.2|Wdr7|ENSMUSG00000040560.11|WD repeat domain 7
mm39_v1_chr7_-_141649003_141649043	0.87344	Pknox2_Pknox1	ENSMUST00000039926.10|Dusp8|ENSMUSG00000037887.12|dual specificity phosphatase 8
mm39_v1_chr9_+_123195986_123196068	0.838537	Pknox2_Pknox1	ENSMUST00000038863.9|Lars2|ENSMUSG00000035202.9|leucyl-tRNA synthetase, mitochondrial	ENSMUST00000216843.2|Lars2|ENSMUSG00000035202.9|leucyl-tRNA synthetase, mitochondrial
mm39_v1_chr7_-_131012051_131012134	0.832421	Pknox2_Pknox1	ENSMUST00000154602.8|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000142349.3|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5
mm39_v1_chr5_+_34919078_34919124	0.811659	Pknox2_Pknox1	ENSMUST00000080036.3|Htt|ENSMUSG00000029104.16|huntingtin
mm39_v1_chr1_+_156193607_156193619	0.806638	Pknox2_Pknox1	ENSMUST00000102782.4|Gm2000|ENSMUSG00000078193.3|predicted gene 2000
mm39_v1_chr17_-_48739874_48739958	0.799626	Pknox2_Pknox1	ENSMUST00000046549.5|Apobec2|ENSMUSG00000040694.5|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm39_v1_chr2_+_30306116_30306154	0.79819	Pknox2_Pknox1	ENSMUST00000113601.10|Ptpa|ENSMUSG00000039515.12|protein phosphatase 2 protein activator	ENSMUST00000113603.10|Ptpa|ENSMUSG00000039515.12|protein phosphatase 2 protein activator
mm39_v1_chr3_+_51323383_51323465	0.780675	Pknox2_Pknox1	ENSMUST00000029303.13|Naa15|ENSMUSG00000063273.12|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm39_v1_chr11_-_46203047_46203185	0.754789	Pknox2_Pknox1	ENSMUST00000129474.2|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2	ENSMUST00000093166.11|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2	ENSMUST00000165599.9|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2
mm39_v1_chr8_+_89423645_89423705	0.734969	Pknox2_Pknox1	ENSMUST00000043526.15|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase	ENSMUST00000211554.2|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase	ENSMUST00000209532.2|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase	ENSMUST00000209559.2|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase
mm39_v1_chr11_+_117877118_117877118	0.731879	Pknox2_Pknox1	ENSMUST00000132676.8|Pgs1|ENSMUSG00000017715.12|phosphatidylglycerophosphate synthase 1
mm39_v1_chr1_+_134109888_134109914	0.717399	Pknox2_Pknox1	ENSMUST00000156873.8|Chil1|ENSMUSG00000064246.11|chitinase-like 1
mm39_v1_chr3_+_116388600_116388682	0.703696	Pknox2_Pknox1	ENSMUST00000198386.5|Sass6|ENSMUSG00000027959.15|SAS-6 centriolar assembly protein	ENSMUST00000198311.5|Sass6|ENSMUSG00000027959.15|SAS-6 centriolar assembly protein	ENSMUST00000197335.2|Sass6|ENSMUSG00000027959.15|SAS-6 centriolar assembly protein
mm39_v1_chr11_+_3152874_3153021	0.696562	Pknox2_Pknox1	ENSMUST00000179770.8|Eif4enif1|ENSMUSG00000020454.18|eukaryotic translation initiation factor 4E nuclear import factor 1	ENSMUST00000110048.8|Eif4enif1|ENSMUSG00000020454.18|eukaryotic translation initiation factor 4E nuclear import factor 1
mm39_v1_chr3_-_108352459_108352497	0.694176	Pknox2_Pknox1	ENSMUST00000132467.8|Sars|ENSMUSG00000068739.14|seryl-aminoacyl-tRNA synthetase	ENSMUST00000102625.11|Sars|ENSMUSG00000068739.14|seryl-aminoacyl-tRNA synthetase
mm39_v1_chr1_+_85721132_85721262	0.683964	Pknox2_Pknox1	ENSMUST00000113360.8|Cab39|ENSMUSG00000036707.17|calcium binding protein 39	ENSMUST00000126962.3|Cab39|ENSMUSG00000036707.17|calcium binding protein 39
mm39_v1_chr18_+_49965689_49965752	0.683164	Pknox2_Pknox1	ENSMUST00000180611.8|Dmxl1|ENSMUSG00000037416.14|Dmx-like 1
mm39_v1_chr4_+_126915104_126915133	0.675144	Pknox2_Pknox1	ENSMUST00000030623.8|Sfpq|ENSMUSG00000028820.14|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm39_v1_chr5_+_93416091_93416173	0.67507	Pknox2_Pknox1	ENSMUST00000121127.2|Ccng2|ENSMUSG00000029385.15|cyclin G2
mm39_v1_chr10_-_123032881_123032900	0.667129	Pknox2_Pknox1	ENSMUST00000220377.2|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15
mm39_v1_chr13_+_63963054_63963289	0.666694	Pknox2_Pknox1	ENSMUST00000021926.13|Ercc6l2|ENSMUSG00000021470.20|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	ENSMUST00000067821.13|Ercc6l2|ENSMUSG00000021470.20|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	ENSMUST00000144763.2|Ercc6l2|ENSMUSG00000021470.20|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	ENSMUST00000021925.14|Ercc6l2|ENSMUSG00000021470.20|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	ENSMUST00000238465.2|Ercc6l2|ENSMUSG00000021470.20|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
mm39_v1_chr2_-_76812799_76812897	0.664389	Pknox2_Pknox1	ENSMUST00000011934.13|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000099981.10|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000099980.10|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000111882.9|Ttn|ENSMUSG00000051747.16|titin	ENSMUST00000140091.8|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr6_+_38086190_38086337	0.655681	Pknox2_Pknox1	ENSMUST00000031851.5|Tmem213|ENSMUSG00000029829.5|transmembrane protein 213
mm39_v1_chr3_+_95139598_95139627	0.651207	Pknox2_Pknox1	ENSMUST00000107200.8|Cdc42se1|ENSMUSG00000046722.15|CDC42 small effector 1	ENSMUST00000107199.2|Cdc42se1|ENSMUSG00000046722.15|CDC42 small effector 1
mm39_v1_chr5_+_35146727_35146750	0.633949	Pknox2_Pknox1	ENSMUST00000114284.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr16_-_10993919_10993964	0.629289	Pknox2_Pknox1	ENSMUST00000142389.3|Zc3h7a|ENSMUSG00000037965.16|zinc finger CCCH type containing 7 A	ENSMUST00000138185.9|Zc3h7a|ENSMUSG00000037965.16|zinc finger CCCH type containing 7 A
mm39_v1_chr1_-_87029312_87029339	0.626242	Pknox2_Pknox1	ENSMUST00000113270.3|Alpi|ENSMUSG00000079440.3|alkaline phosphatase, intestinal
mm39_v1_chr3_-_100591906_100591942	0.620649	Pknox2_Pknox1	ENSMUST00000130066.2|Man1a2|ENSMUSG00000008763.17|mannosidase, alpha, class 1A, member 2
mm39_v1_chr6_-_106777014_106777056	0.601054	Pknox2_Pknox1	ENSMUST00000013882.10|Crbn|ENSMUSG00000005362.15|cereblon	ENSMUST00000113239.10|Crbn|ENSMUSG00000005362.15|cereblon
mm39_v1_chr13_-_64300964_64301043	0.586435	Pknox2_Pknox1	ENSMUST00000059817.12|Zfp367|ENSMUSG00000044934.14|zinc finger protein 367	ENSMUST00000117241.2|Zfp367|ENSMUSG00000044934.14|zinc finger protein 367
mm39_v1_chr9_+_67747668_67747711	0.558659	Pknox2_Pknox1	ENSMUST00000077879.7|Vps13c|ENSMUSG00000035284.11|vacuolar protein sorting 13C
mm39_v1_chr4_-_108158242_108158303	0.557615	Pknox2_Pknox1	ENSMUST00000043616.7|Zyg11b|ENSMUSG00000034636.10|zyg-ll family member B, cell cycle regulator
mm39_v1_chr16_+_91188609_91188657	0.554626	Pknox2_Pknox1	ENSMUST00000160764.2|Gm21970|ENSMUSG00000093701.8|predicted gene 21970
mm39_v1_chr3_+_51324022_51324035	0.528551	Pknox2_Pknox1	ENSMUST00000192419.6|Naa15|ENSMUSG00000063273.12|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm39_v1_chr10_-_117546660_117546671	0.513408	Pknox2_Pknox1	ENSMUST00000020408.16|Mdm2|ENSMUSG00000020184.16|transformed mouse 3T3 cell double minute 2	ENSMUST00000105263.9|Mdm2|ENSMUSG00000020184.16|transformed mouse 3T3 cell double minute 2
mm39_v1_chr7_+_45084257_45084295	0.505425	Pknox2_Pknox1	ENSMUST00000003964.17|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr5_+_35146880_35146893	0.48898	Pknox2_Pknox1	ENSMUST00000114285.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr17_-_25155868_25155976	0.487734	Pknox2_Pknox1	ENSMUST00000115228.9|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000117509.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121723.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000119115.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121787.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000088345.12|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000120035.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000115229.10|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000178969.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3
mm39_v1_chr6_-_38086484_38086509	0.471151	Pknox2_Pknox1	ENSMUST00000114908.5|Atp6v0a4|ENSMUSG00000038600.13|ATPase, H+ transporting, lysosomal V0 subunit A4
mm39_v1_chr7_-_45084012_45084133	0.469581	Pknox2_Pknox1	ENSMUST00000107771.12|Ruvbl2|ENSMUSG00000003868.15|RuvB-like protein 2	ENSMUST00000211666.2|Ruvbl2|ENSMUSG00000003868.15|RuvB-like protein 2
mm39_v1_chr7_-_45083688_45083733	0.463256	Pknox2_Pknox1	ENSMUST00000210439.2|Ruvbl2|ENSMUSG00000003868.15|RuvB-like protein 2
mm39_v1_chr16_-_90808196_90808319	0.444415	Pknox2_Pknox1	ENSMUST00000121759.8|Synj1|ENSMUSG00000022973.19|synaptojanin 1
mm39_v1_chr1_+_156386414_156386619	0.43891	Pknox2_Pknox1	ENSMUST00000166172.9|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)	ENSMUST00000027888.13|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm39_v1_chr7_+_45084300_45084314	0.436304	Pknox2_Pknox1	ENSMUST00000211150.2|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr11_+_78215026_78215062	0.419735	Pknox2_Pknox1	ENSMUST00000102478.4|Aldoc|ENSMUSG00000017390.16|aldolase C, fructose-bisphosphate
mm39_v1_chr4_+_11758147_11758220	0.411318	Pknox2_Pknox1	ENSMUST00000029871.12|Cdh17|ENSMUSG00000028217.12|cadherin 17	ENSMUST00000108303.2|Cdh17|ENSMUSG00000028217.12|cadherin 17
mm39_v1_chr7_+_98352298_98352348	0.371143	Pknox2_Pknox1	ENSMUST00000033009.16|Thap12|ENSMUSG00000030753.16|THAP domain containing 12
mm39_v1_chr13_+_109822527_109822690	0.367418	Pknox2_Pknox1	ENSMUST00000074103.12|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr2_+_163837423_163837423	0.356257	Pknox2_Pknox1	ENSMUST00000131288.2|Ywhab|ENSMUSG00000018326.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm39_v1_chr17_+_30845909_30845965	0.35247	Pknox2_Pknox1	ENSMUST00000236140.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000236118.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000235390.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8
mm39_v1_chr8_-_112248619_112248744	0.349855	Pknox2_Pknox1	ENSMUST00000211981.2|Wdr59|ENSMUSG00000031959.16|WD repeat domain 59	ENSMUST00000034437.8|Wdr59|ENSMUSG00000031959.16|WD repeat domain 59	ENSMUST00000038193.15|Wdr59|ENSMUSG00000031959.16|WD repeat domain 59
mm39_v1_chr5_-_122917341_122917496	0.342511	Pknox2_Pknox1	ENSMUST00000198257.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000199599.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000196742.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000200109.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000111668.8|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm39_v1_chr3_-_95139472_95139492	0.336612	Pknox2_Pknox1	ENSMUST00000196025.5|Mllt11|ENSMUSG00000053192.10|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11	ENSMUST00000198948.5|Mllt11|ENSMUSG00000053192.10|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
mm39_v1_chr8_+_26091607_26091625	0.333646	Pknox2_Pknox1	ENSMUST00000155861.8|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3
mm39_v1_chr8_-_81741495_81741569	0.323164	Pknox2_Pknox1	ENSMUST00000042724.8|Usp38|ENSMUSG00000038250.10|ubiquitin specific peptidase 38
mm39_v1_chr3_+_137570248_137570286	0.320301	Pknox2_Pknox1	ENSMUST00000041045.14|H2az1|ENSMUSG00000037894.14|H2A.Z variant histone 1
mm39_v1_chr3_-_27764571_27764616	0.318736	Pknox2_Pknox1	ENSMUST00000046157.10|Fndc3b|ENSMUSG00000039286.13|fibronectin type III domain containing 3B
mm39_v1_chr3_-_27764522_27764547	0.308352	Pknox2_Pknox1	ENSMUST00000195008.6|Fndc3b|ENSMUSG00000039286.13|fibronectin type III domain containing 3B
mm39_v1_chr3_-_51468236_51468300	0.296532	Pknox2_Pknox1	ENSMUST00000037141.9|Setd7|ENSMUSG00000037111.10|SET domain containing (lysine methyltransferase) 7
mm39_v1_chr2_+_152753231_152753286	0.293511	Pknox2_Pknox1	ENSMUST00000028970.8|Mylk2|ENSMUSG00000027470.10|myosin, light polypeptide kinase 2, skeletal muscle
mm39_v1_chr10_-_62486948_62487013	0.281408	Pknox2_Pknox1	ENSMUST00000020270.6|Ddx50|ENSMUSG00000020076.8|DExD box helicase 50
mm39_v1_chr2_-_31031814_31032029	0.27316	Pknox2_Pknox1	ENSMUST00000073879.12|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000100208.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000100207.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113555.8|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000075326.11|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113552.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000136181.8|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113564.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113562.9|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1	ENSMUST00000113560.8|Fnbp1|ENSMUSG00000075415.14|formin binding protein 1
mm39_v1_chr5_-_138617952_138618023	0.270168	Pknox2_Pknox1	ENSMUST00000063262.11|Zfp68|ENSMUSG00000058291.15|zinc finger protein 68	ENSMUST00000085852.11|Zfp68|ENSMUSG00000058291.15|zinc finger protein 68	ENSMUST00000110905.9|Zfp68|ENSMUSG00000058291.15|zinc finger protein 68
mm39_v1_chr11_+_83855245_83855304	0.263792	Pknox2_Pknox1	ENSMUST00000049714.15|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000092834.12|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000183714.8|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000183456.8|Synrg|ENSMUSG00000034940.16|synergin, gamma
mm39_v1_chr10_-_7668560_7668595	0.262299	Pknox2_Pknox1	ENSMUST00000065124.2|Ginm1|ENSMUSG00000040006.14|glycoprotein integral membrane 1
mm39_v1_chr11_-_97913420_97913496	0.256063	Pknox2_Pknox1	ENSMUST00000103144.10|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000017552.13|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000092736.11|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000107562.2|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit
mm39_v1_chr8_-_65146079_65146108	0.240129	Pknox2_Pknox1	ENSMUST00000048967.9|Cpe|ENSMUSG00000037852.9|carboxypeptidase E
mm39_v1_chr13_+_46822992_46823022	0.239668	Pknox2_Pknox1	ENSMUST00000099547.4|Fam8a1|ENSMUSG00000069237.9|family with sequence similarity 8, member A1
mm39_v1_chrX_+_48552803_48552850	0.239537	Pknox2_Pknox1	ENSMUST00000130558.8|Arhgap36|ENSMUSG00000036198.13|Rho GTPase activating protein 36
mm39_v1_chr17_-_65920481_65920550	0.230317	Pknox2_Pknox1	ENSMUST00000024897.10|Vapa|ENSMUSG00000024091.10|vesicle-associated membrane protein, associated protein A
mm39_v1_chr12_+_104094253_104094261	0.228703	Pknox2_Pknox1	ENSMUST00000085052.3|Serpina3b|ENSMUSG00000066364.3|serine (or cysteine) peptidase inhibitor, clade A, member 3B
mm39_v1_chr10_+_82534841_82534983	0.213373	Pknox2_Pknox1	ENSMUST00000020478.14|Hcfc2|ENSMUSG00000020246.14|host cell factor C2
mm39_v1_chr17_-_30845845_30845879	0.199679	Pknox2_Pknox1	ENSMUST00000235547.2|Glo1|ENSMUSG00000024026.14|glyoxalase 1	ENSMUST00000188852.2|1700097N02Rik|ENSMUSG00000099474.2|RIKEN cDNA 1700097N02 gene
mm39_v1_chr11_+_78717398_78717444	0.195348	Pknox2_Pknox1	ENSMUST00000147875.9|Lyrm9|ENSMUSG00000072640.12|LYR motif containing 9	ENSMUST00000141321.2|Lyrm9|ENSMUSG00000072640.12|LYR motif containing 9
mm39_v1_chr7_+_24920840_24920894	0.177856	Pknox2_Pknox1	ENSMUST00000055604.6|Zfp526|ENSMUSG00000046541.10|zinc finger protein 526
mm39_v1_chr1_-_74627264_74627308	0.177363	Pknox2_Pknox1	ENSMUST00000066986.13|Zfp142|ENSMUSG00000026135.18|zinc finger protein 142
mm39_v1_chr3_+_96577447_96577447	0.176139	Pknox2_Pknox1	ENSMUST00000048427.9|Ankrd35|ENSMUSG00000038354.14|ankyrin repeat domain 35
mm39_v1_chr5_+_110434172_110434256	0.17501	Pknox2_Pknox1	ENSMUST00000007296.12|Pole|ENSMUSG00000007080.15|polymerase (DNA directed), epsilon	ENSMUST00000112482.2|Pole|ENSMUSG00000007080.15|polymerase (DNA directed), epsilon
mm39_v1_chr9_+_21336300_21336540	0.170938	Pknox2_Pknox1	ENSMUST00000172482.8|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000174050.8|Dnm2|ENSMUSG00000033335.18|dynamin 2
mm39_v1_chr1_+_135980639_135980696	0.169777	Pknox2_Pknox1	ENSMUST00000112064.8|Cacna1s|ENSMUSG00000026407.18|calcium channel, voltage-dependent, L type, alpha 1S subunit
mm39_v1_chr1_+_135980488_135980499	0.164689	Pknox2_Pknox1	ENSMUST00000160641.8|Cacna1s|ENSMUSG00000026407.18|calcium channel, voltage-dependent, L type, alpha 1S subunit
mm39_v1_chr2_+_111610658_111610658	0.15981	Pknox2_Pknox1	ENSMUST00000054004.2|Olfr1302|ENSMUSG00000044560.4|olfactory receptor 1302
mm39_v1_chr1_+_106866678_106866693	0.153592	Pknox2_Pknox1	ENSMUST00000112724.3|Serpinb12|ENSMUSG00000059956.15|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
mm39_v1_chr17_+_29768757_29768773	0.148908	Pknox2_Pknox1	ENSMUST00000048677.9|Tbc1d22b|ENSMUSG00000042203.9|TBC1 domain family, member 22B	ENSMUST00000150388.3|Gm28052|ENSMUSG00000099329.3|predicted gene, 28052
mm39_v1_chr14_+_55252911_55253032	0.146354	Pknox2_Pknox1	ENSMUST00000022815.10|Ngdn|ENSMUSG00000022204.10|neuroguidin, EIF4E binding protein
mm39_v1_chrX_-_101548965_101549017	0.136634	Pknox2_Pknox1	ENSMUST00000087916.11|Hdac8|ENSMUSG00000067567.13|histone deacetylase 8
mm39_v1_chr16_-_89940652_89940662	0.128609	Pknox2_Pknox1	ENSMUST00000114124.9|Tiam1|ENSMUSG00000002489.17|T cell lymphoma invasion and metastasis 1
mm39_v1_chr13_+_76532470_76532654	0.127082	Pknox2_Pknox1	ENSMUST00000125209.8|Mctp1|ENSMUSG00000021596.17|multiple C2 domains, transmembrane 1
mm39_v1_chr11_+_55095144_55095211	0.125559	Pknox2_Pknox1	ENSMUST00000108872.9|Slc36a1|ENSMUSG00000020261.16|solute carrier family 36 (proton/amino acid symporter), member 1	ENSMUST00000147506.8|Slc36a1|ENSMUSG00000020261.16|solute carrier family 36 (proton/amino acid symporter), member 1	ENSMUST00000020499.14|Slc36a1|ENSMUSG00000020261.16|solute carrier family 36 (proton/amino acid symporter), member 1
mm39_v1_chr11_-_114686712_114686729	0.124505	Pknox2_Pknox1	ENSMUST00000000206.4|Btbd17|ENSMUSG00000000202.10|BTB (POZ) domain containing 17
mm39_v1_chr17_-_31738901_31738955	0.120339	Pknox2_Pknox1	ENSMUST00000171291.2|Wdr4|ENSMUSG00000024037.14|WD repeat domain 4	ENSMUST00000237807.2|Wdr4|ENSMUSG00000024037.14|WD repeat domain 4
mm39_v1_chr12_-_108860042_108860100	0.118062	Pknox2_Pknox1	ENSMUST00000109848.10|Wars|ENSMUSG00000021266.17|tryptophanyl-tRNA synthetase
mm39_v1_chr6_+_135042649_135042680	0.115855	Pknox2_Pknox1	ENSMUST00000050104.8|Gprc5a|ENSMUSG00000046733.8|G protein-coupled receptor, family C, group 5, member A
mm39_v1_chr5_+_67765216_67765232	0.111082	Pknox2_Pknox1	ENSMUST00000087241.7|Shisa3|ENSMUSG00000050010.9|shisa family member 3
mm39_v1_chr2_+_162829422_162829429	0.10386	Pknox2_Pknox1	ENSMUST00000117123.2|Sgk2|ENSMUSG00000017868.17|serum/glucocorticoid regulated kinase 2
mm39_v1_chr16_+_55794244_55794255	0.103195	Pknox2_Pknox1	ENSMUST00000050248.9|Zbtb11|ENSMUSG00000022601.12|zinc finger and BTB domain containing 11
mm39_v1_chr12_-_85420684_85420729	0.0916082	Pknox2_Pknox1	ENSMUST00000222585.2|Tmed10|ENSMUSG00000021248.10|transmembrane p24 trafficking protein 10
mm39_v1_chr1_+_87052668_87052730	0.0845092	Pknox2_Pknox1	ENSMUST00000044878.4|Akp3|ENSMUSG00000036500.5|alkaline phosphatase 3, intestine, not Mn requiring
mm39_v1_chr2_+_129854256_129854270	0.0844731	Pknox2_Pknox1	ENSMUST00000110299.3|Tgm3|ENSMUSG00000027401.10|transglutaminase 3, E polypeptide
mm39_v1_chr10_-_129738595_129738595	0.0831917	Pknox2_Pknox1	ENSMUST00000071557.2|Olfr815|ENSMUSG00000061961.4|olfactory receptor 815
mm39_v1_chr9_+_68561042_68561068	0.0831502	Pknox2_Pknox1	ENSMUST00000034766.14|Rora|ENSMUSG00000032238.18|RAR-related orphan receptor alpha
mm39_v1_chr9_+_107805647_107805684	0.0801503	Pknox2_Pknox1	ENSMUST00000085073.2|Actl11|ENSMUSG00000066368.2|actin-like 11
mm39_v1_chr1_+_135980508_135980533	0.0780893	Pknox2_Pknox1	ENSMUST00000112068.10|Cacna1s|ENSMUSG00000026407.18|calcium channel, voltage-dependent, L type, alpha 1S subunit
mm39_v1_chr4_+_133970973_133971089	0.0730722	Pknox2_Pknox1	ENSMUST00000135228.8|E130218I03Rik|ENSMUSG00000086322.8|RIKEN cDNA E130218I03 gene	ENSMUST00000144222.8|E130218I03Rik|ENSMUSG00000086322.8|RIKEN cDNA E130218I03 gene	ENSMUST00000143448.8|E130218I03Rik|ENSMUSG00000086322.8|RIKEN cDNA E130218I03 gene	ENSMUST00000125921.8|E130218I03Rik|ENSMUSG00000086322.8|RIKEN cDNA E130218I03 gene	ENSMUST00000122952.8|E130218I03Rik|ENSMUSG00000086322.8|RIKEN cDNA E130218I03 gene	ENSMUST00000131447.2|E130218I03Rik|ENSMUSG00000086322.8|RIKEN cDNA E130218I03 gene
mm39_v1_chr7_-_12743720_12743783	0.070362	Pknox2_Pknox1	ENSMUST00000210282.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000172240.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000051390.9|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000209997.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45
mm39_v1_chr11_-_20781009_20781056	0.0684786	Pknox2_Pknox1	ENSMUST00000047028.9|Lgalsl|ENSMUSG00000042363.15|lectin, galactoside binding-like
mm39_v1_chr1_+_156443472_156443503	0.0612424	Pknox2_Pknox1	ENSMUST00000190749.2|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm39_v1_chr17_+_30843328_30843328	0.056809	Pknox2_Pknox1	ENSMUST00000170651.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8
mm39_v1_chr15_+_99600475_99600537	0.0479362	Pknox2_Pknox1	ENSMUST00000228984.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	ENSMUST00000229845.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr2_+_162829250_162829357	0.0451219	Pknox2_Pknox1	ENSMUST00000018012.14|Sgk2|ENSMUSG00000017868.17|serum/glucocorticoid regulated kinase 2
mm39_v1_chr5_+_24679154_24679212	0.0449463	Pknox2_Pknox1	ENSMUST00000199856.2|Agap3|ENSMUSG00000023353.15|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
mm39_v1_chr4_-_119075362_119075414	0.037075	Pknox2_Pknox1	ENSMUST00000212054.2|Tmem269|ENSMUSG00000028642.8|transmembrane protein 269	ENSMUST00000030394.3|Tmem269|ENSMUSG00000028642.8|transmembrane protein 269
mm39_v1_chr8_-_116434517_116434533	0.0330571	Pknox2_Pknox1	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr3_-_84178089_84178100	0.0291174	Pknox2_Pknox1	ENSMUST00000054990.11|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr7_+_65693350_65693350	0.0288909	Pknox2_Pknox1	ENSMUST00000206065.2|Gm45213|ENSMUSG00000108793.2|predicted gene 45213
mm39_v1_chr2_-_113588983_113589000	0.0263944	Pknox2_Pknox1	ENSMUST00000099575.4|Grem1|ENSMUSG00000074934.4|gremlin 1, DAN family BMP antagonist
mm39_v1_chr9_+_21336198_21336272	0.0259841	Pknox2_Pknox1	ENSMUST00000165766.9|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000173397.8|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000072362.14|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000091087.13|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000115404.11|Dnm2|ENSMUSG00000033335.18|dynamin 2
mm39_v1_chr7_+_13132040_13132057	0.0252965	Pknox2_Pknox1	ENSMUST00000005791.14|Cabp5|ENSMUSG00000005649.18|calcium binding protein 5
mm39_v1_chr10_-_29411857_29411868	0.0236781	Pknox2_Pknox1	ENSMUST00000092623.5|Rspo3|ENSMUSG00000019880.11|R-spondin 3
mm39_v1_chr8_-_91860655_91860666	0.0205421	Pknox2_Pknox1	ENSMUST00000125257.3|Aktip|ENSMUSG00000031667.17|AKT interacting protein
mm39_v1_chr11_-_78277384_78277433	0.018948	Pknox2_Pknox1	ENSMUST00000108294.2|Foxn1|ENSMUSG00000002057.5|forkhead box N1
mm39_v1_chr12_+_108145802_108145842	0.0123214	Pknox2_Pknox1	ENSMUST00000221167.2|Ccnk|ENSMUSG00000021258.11|cyclin K
mm39_v1_chr9_-_29874401_29874437	0.0114879	Pknox2_Pknox1	ENSMUST00000075069.11|Ntm|ENSMUSG00000059974.11|neurotrimin
mm39_v1_chr13_-_12121831_12121871	0.0108555	Pknox2_Pknox1	ENSMUST00000021750.15|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000170156.3|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000220597.2|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac
mm39_v1_chr6_-_71239216_71239265	0.00843305	Pknox2_Pknox1	ENSMUST00000129630.3|Smyd1|ENSMUSG00000055027.18|SET and MYND domain containing 1	ENSMUST00000114186.9|Smyd1|ENSMUSG00000055027.18|SET and MYND domain containing 1	ENSMUST00000074301.10|Smyd1|ENSMUSG00000055027.18|SET and MYND domain containing 1
mm39_v1_chrX_+_13499008_13499040	0.00312803	Pknox2_Pknox1	ENSMUST00000096492.4|Gpr34|ENSMUSG00000040229.12|G protein-coupled receptor 34
mm39_v1_chr5_+_57879201_57879255	0.00235051	Pknox2_Pknox1	ENSMUST00000199310.2|Pcdh7|ENSMUSG00000029108.15|protocadherin 7
