mm39_v1_chr7_-_142215027_142215050	3.36784	Rorc_Nr1d1	ENSMUST00000105936.8|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr7_-_142215595_142215617	2.70252	Rorc_Nr1d1	ENSMUST00000145896.3|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr7_+_45354512_45354735	2.19024	Rorc_Nr1d1	ENSMUST00000080885.12|Dbp|ENSMUSG00000059824.13|D site albumin promoter binding protein	ENSMUST00000211513.2|Dbp|ENSMUSG00000059824.13|D site albumin promoter binding protein	ENSMUST00000211357.2|Dbp|ENSMUSG00000059824.13|D site albumin promoter binding protein
mm39_v1_chr1_-_120432669_120432753	2.15841	Rorc_Nr1d1	ENSMUST00000027639.8|Marco|ENSMUSG00000026390.8|macrophage receptor with collagenous structure
mm39_v1_chr5_+_90708962_90709076	1.86339	Rorc_Nr1d1	ENSMUST00000094615.8|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1	ENSMUST00000200765.2|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1
mm39_v1_chr16_-_18904240_18904256	1.40842	Rorc_Nr1d1	ENSMUST00000103746.3|Iglv1|ENSMUSG00000076934.3|immunoglobulin lambda variable 1
mm39_v1_chr1_-_120432477_120432497	1.16731	Rorc_Nr1d1	ENSMUST00000186432.3|Marco|ENSMUSG00000026390.8|macrophage receptor with collagenous structure
mm39_v1_chr3_-_10273628_10273646	1.13162	Rorc_Nr1d1	ENSMUST00000029041.6|Fabp4|ENSMUSG00000062515.4|fatty acid binding protein 4, adipocyte
mm39_v1_chr17_+_43671314_43671345	1.10759	Rorc_Nr1d1	ENSMUST00000226087.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5
mm39_v1_chr10_-_128237087_128237103	1.02252	Rorc_Nr1d1	ENSMUST00000042666.13|Slc39a5|ENSMUSG00000039878.14|solute carrier family 39 (metal ion transporter), member 5
mm39_v1_chr14_+_79086492_79086662	0.963512	Rorc_Nr1d1	ENSMUST00000040990.7|Vwa8|ENSMUSG00000058997.9|von Willebrand factor A domain containing 8
mm39_v1_chr14_+_73379930_73380005	0.88504	Rorc_Nr1d1	ENSMUST00000170370.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000164822.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000165429.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm39_v1_chrX_-_135104589_135104668	0.844018	Rorc_Nr1d1	ENSMUST00000066819.11|Tceal5|ENSMUSG00000054034.11|transcription elongation factor A (SII)-like 5
mm39_v1_chr17_+_25105617_25105739	0.821549	Rorc_Nr1d1	ENSMUST00000117890.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000168265.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000120943.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000068508.13|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000119829.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3
mm39_v1_chr18_-_39000056_39000070	0.63608	Rorc_Nr1d1	ENSMUST00000236630.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000237356.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr17_+_33857030_33857086	0.571365	Rorc_Nr1d1	ENSMUST00000052079.8|Pram1|ENSMUSG00000032739.17|PML-RAR alpha-regulated adaptor molecule 1
mm39_v1_chr13_+_6598185_6598226	0.555951	Rorc_Nr1d1	ENSMUST00000021611.10|Pitrm1|ENSMUSG00000021193.11|pitrilysin metallepetidase 1	ENSMUST00000222485.2|Pitrm1|ENSMUSG00000021193.11|pitrilysin metallepetidase 1
mm39_v1_chr11_+_4833186_4833222	0.547823	Rorc_Nr1d1	ENSMUST00000139737.2|Nipsnap1|ENSMUSG00000034285.16|nipsnap homolog 1
mm39_v1_chr7_-_105249308_105249344	0.538097	Rorc_Nr1d1	ENSMUST00000210531.2|Hpx|ENSMUSG00000030895.10|hemopexin	ENSMUST00000033185.10|Hpx|ENSMUSG00000030895.10|hemopexin
mm39_v1_chr13_+_52750883_52750894	0.533389	Rorc_Nr1d1	ENSMUST00000055087.7|Syk|ENSMUSG00000021457.15|spleen tyrosine kinase
mm39_v1_chr4_+_115641996_115642037	0.491861	Rorc_Nr1d1	ENSMUST00000177280.8|Atpaf1|ENSMUSG00000028710.19|ATP synthase mitochondrial F1 complex assembly factor 1	ENSMUST00000176047.8|Atpaf1|ENSMUSG00000028710.19|ATP synthase mitochondrial F1 complex assembly factor 1
mm39_v1_chrX_-_135104386_135104587	0.463834	Rorc_Nr1d1	ENSMUST00000151592.8|Tceal5|ENSMUSG00000054034.11|transcription elongation factor A (SII)-like 5	ENSMUST00000131510.2|Tceal5|ENSMUSG00000054034.11|transcription elongation factor A (SII)-like 5
mm39_v1_chr11_+_114780867_114781038	0.45747	Rorc_Nr1d1	ENSMUST00000106582.9|Cd300a|ENSMUSG00000034652.13|CD300A molecule	ENSMUST00000045151.6|Cd300a|ENSMUSG00000034652.13|CD300A molecule
mm39_v1_chr5_+_31454787_31454932	0.450626	Rorc_Nr1d1	ENSMUST00000201166.4|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein	ENSMUST00000072228.9|Gckr|ENSMUSG00000059434.10|glucokinase regulatory protein
mm39_v1_chr4_+_94627513_94627537	0.445244	Rorc_Nr1d1	ENSMUST00000073939.13|Tek|ENSMUSG00000006386.16|TEK receptor tyrosine kinase	ENSMUST00000102798.8|Tek|ENSMUSG00000006386.16|TEK receptor tyrosine kinase
mm39_v1_chr3_+_108291145_108291232	0.443571	Rorc_Nr1d1	ENSMUST00000090561.10|Psrc1|ENSMUSG00000068744.13|proline/serine-rich coiled-coil 1	ENSMUST00000102629.8|Psrc1|ENSMUSG00000068744.13|proline/serine-rich coiled-coil 1	ENSMUST00000128089.2|Psrc1|ENSMUSG00000068744.13|proline/serine-rich coiled-coil 1
mm39_v1_chr2_+_90716204_90716216	0.438155	Rorc_Nr1d1	ENSMUST00000111466.3|C1qtnf4|ENSMUSG00000040794.6|C1q and tumor necrosis factor related protein 4
mm39_v1_chr8_+_3715747_3715763	0.429128	Rorc_Nr1d1	ENSMUST00000014118.4|Mcemp1|ENSMUSG00000013974.4|mast cell expressed membrane protein 1
mm39_v1_chr15_-_5137975_5138050	0.423561	Rorc_Nr1d1	ENSMUST00000118365.3|Card6|ENSMUSG00000041849.8|caspase recruitment domain family, member 6
mm39_v1_chr19_+_6434416_6434453	0.42184	Rorc_Nr1d1	ENSMUST00000035269.15|Pygm|ENSMUSG00000032648.15|muscle glycogen phosphorylase	ENSMUST00000113483.2|Pygm|ENSMUSG00000032648.15|muscle glycogen phosphorylase
mm39_v1_chr10_+_25317309_25317509	0.412471	Rorc_Nr1d1	ENSMUST00000217929.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2	ENSMUST00000220121.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr6_+_29361408_29361460	0.398168	Rorc_Nr1d1	ENSMUST00000156163.2|Calu|ENSMUSG00000029767.17|calumenin
mm39_v1_chr3_+_90511068_90511084	0.383176	Rorc_Nr1d1	ENSMUST00000001046.7|S100a4|ENSMUSG00000001020.9|S100 calcium binding protein A4
mm39_v1_chr7_+_45276906_45276917	0.37865	Rorc_Nr1d1	ENSMUST00000057927.10|Rasip1|ENSMUSG00000044562.13|Ras interacting protein 1
mm39_v1_chr15_-_66673425_66673448	0.372257	Rorc_Nr1d1	ENSMUST00000168589.8|Sla|ENSMUSG00000022372.15|src-like adaptor
mm39_v1_chr7_+_126810780_126810883	0.364376	Rorc_Nr1d1	ENSMUST00000032910.13|Mylpf|ENSMUSG00000030672.13|myosin light chain, phosphorylatable, fast skeletal muscle
mm39_v1_chr2_+_155593030_155593043	0.363156	Rorc_Nr1d1	ENSMUST00000029140.12|Procr|ENSMUSG00000027611.13|protein C receptor, endothelial	ENSMUST00000132608.2|Procr|ENSMUSG00000027611.13|protein C receptor, endothelial
mm39_v1_chr15_+_58287305_58287361	0.35571	Rorc_Nr1d1	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chr17_-_46343291_46343309	0.353285	Rorc_Nr1d1	ENSMUST00000071648.12|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A	ENSMUST00000142351.9|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A
mm39_v1_chr13_-_63036096_63036207	0.346355	Rorc_Nr1d1	ENSMUST00000092888.11|Fbp1|ENSMUSG00000069805.11|fructose bisphosphatase 1
mm39_v1_chr11_-_110058899_110059022	0.343588	Rorc_Nr1d1	ENSMUST00000044850.4|Abca9|ENSMUSG00000041797.8|ATP-binding cassette, sub-family A (ABC1), member 9
mm39_v1_chr8_-_95405234_95405368	0.343173	Rorc_Nr1d1	ENSMUST00000213043.2|Pllp|ENSMUSG00000031775.6|plasma membrane proteolipid
mm39_v1_chr15_-_5137951_5137971	0.339998	Rorc_Nr1d1	ENSMUST00000141020.2|Card6|ENSMUSG00000041849.8|caspase recruitment domain family, member 6
mm39_v1_chr7_+_114367971_114368033	0.332913	Rorc_Nr1d1	ENSMUST00000117543.3|Insc|ENSMUSG00000048782.16|INSC spindle orientation adaptor protein	ENSMUST00000151464.2|Insc|ENSMUSG00000048782.16|INSC spindle orientation adaptor protein
mm39_v1_chr17_-_46342739_46342789	0.327535	Rorc_Nr1d1	ENSMUST00000024747.14|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A
mm39_v1_chr9_-_30833748_30833861	0.313613	Rorc_Nr1d1	ENSMUST00000065112.7|Adamts15|ENSMUSG00000033453.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm39_v1_chr12_-_84923252_84923306	0.307162	Rorc_Nr1d1	ENSMUST00000163189.8|Ltbp2|ENSMUSG00000002020.16|latent transforming growth factor beta binding protein 2	ENSMUST00000110254.9|Ltbp2|ENSMUSG00000002020.16|latent transforming growth factor beta binding protein 2	ENSMUST00000002073.13|Ltbp2|ENSMUSG00000002020.16|latent transforming growth factor beta binding protein 2
mm39_v1_chr6_-_88851027_88851078	0.293084	Rorc_Nr1d1	ENSMUST00000038409.12|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2
mm39_v1_chr14_-_60434622_60434634	0.285196	Rorc_Nr1d1	ENSMUST00000131670.3|Atp8a2|ENSMUSG00000021983.17|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm39_v1_chr3_+_122305819_122305871	0.274943	Rorc_Nr1d1	ENSMUST00000199344.2|Bcar3|ENSMUSG00000028121.9|breast cancer anti-estrogen resistance 3
mm39_v1_chr7_-_133833734_133833783	0.273443	Rorc_Nr1d1	ENSMUST00000134504.8|Adam12|ENSMUSG00000054555.12|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm39_v1_chr4_+_11558905_11558979	0.264084	Rorc_Nr1d1	ENSMUST00000095145.12|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)	ENSMUST00000108306.9|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)	ENSMUST00000070755.13|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)
mm39_v1_chr12_-_40298072_40298086	0.263744	Rorc_Nr1d1	ENSMUST00000169926.8|Ifrd1|ENSMUSG00000001627.13|interferon-related developmental regulator 1
mm39_v1_chr11_+_87471867_87471893	0.262426	Rorc_Nr1d1	ENSMUST00000018544.12|Septin4|ENSMUSG00000020486.20|septin 4	ENSMUST00000063156.11|Septin4|ENSMUSG00000020486.20|septin 4	ENSMUST00000107960.8|Septin4|ENSMUSG00000020486.20|septin 4
mm39_v1_chr3_+_53371086_53371102	0.250877	Rorc_Nr1d1	ENSMUST00000058577.5|Proser1|ENSMUSG00000049504.13|proline and serine rich 1
mm39_v1_chr3_-_53370621_53370753	0.24665	Rorc_Nr1d1	ENSMUST00000056749.14|Nhlrc3|ENSMUSG00000042997.14|NHL repeat containing 3
mm39_v1_chr11_+_101136821_101136871	0.244826	Rorc_Nr1d1	ENSMUST00000129680.8|Ramp2|ENSMUSG00000001240.14|receptor (calcitonin) activity modifying protein 2
mm39_v1_chr7_-_79115760_79115818	0.239393	Rorc_Nr1d1	ENSMUST00000125562.2|Polg|ENSMUSG00000039176.18|polymerase (DNA directed), gamma
mm39_v1_chr12_+_3941728_3941801	0.235726	Rorc_Nr1d1	ENSMUST00000172689.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A	ENSMUST00000111186.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr7_+_126895463_126895492	0.229902	Rorc_Nr1d1	ENSMUST00000106306.9|Itgal|ENSMUSG00000030830.19|integrin alpha L	ENSMUST00000120857.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr7_-_79115915_79116110	0.222542	Rorc_Nr1d1	ENSMUST00000073889.14|Polg|ENSMUSG00000039176.18|polymerase (DNA directed), gamma
mm39_v1_chr5_+_135216090_135216126	0.216946	Rorc_Nr1d1	ENSMUST00000002825.6|Baz1b|ENSMUSG00000002748.8|bromodomain adjacent to zinc finger domain, 1B
mm39_v1_chr3_-_153650068_153650090	0.200663	Rorc_Nr1d1	ENSMUST00000150070.2|Acadm|ENSMUSG00000062908.13|acyl-Coenzyme A dehydrogenase, medium chain
mm39_v1_chr7_-_99770280_99770303	0.19286	Rorc_Nr1d1	ENSMUST00000208184.2|Pold3|ENSMUSG00000030726.17|polymerase (DNA-directed), delta 3, accessory subunit
mm39_v1_chr5_-_122917341_122917496	0.192697	Rorc_Nr1d1	ENSMUST00000198257.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000199599.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000196742.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000200109.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000111668.8|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm39_v1_chr3_-_92493507_92493513	0.189941	Rorc_Nr1d1	ENSMUST00000194965.6|Smcp|ENSMUSG00000074435.11|sperm mitochondria-associated cysteine-rich protein
mm39_v1_chr12_+_116011332_116011398	0.187744	Rorc_Nr1d1	ENSMUST00000073551.6|Zfp386|ENSMUSG00000042063.12|zinc finger protein 386 (Kruppel-like)	ENSMUST00000183125.2|Zfp386|ENSMUSG00000042063.12|zinc finger protein 386 (Kruppel-like)
mm39_v1_chr7_+_126895531_126895582	0.1811	Rorc_Nr1d1	ENSMUST00000170971.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr6_-_93890520_93890544	0.179643	Rorc_Nr1d1	ENSMUST00000203688.3|Magi1|ENSMUSG00000045095.17|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm39_v1_chr19_+_31846154_31846187	0.176412	Rorc_Nr1d1	ENSMUST00000224564.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000224304.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000075838.8|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000224400.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor
mm39_v1_chr10_+_80003612_80003680	0.17481	Rorc_Nr1d1	ENSMUST00000105365.9|Cirbp|ENSMUSG00000045193.14|cold inducible RNA binding protein
mm39_v1_chr15_-_10485976_10486037	0.174539	Rorc_Nr1d1	ENSMUST00000169050.8|Brix1|ENSMUSG00000022247.13|BRX1, biogenesis of ribosomes	ENSMUST00000022855.12|Brix1|ENSMUSG00000022247.13|BRX1, biogenesis of ribosomes
mm39_v1_chr7_-_30738471_30738526	0.17431	Rorc_Nr1d1	ENSMUST00000162250.8|Fxyd5|ENSMUSG00000009687.15|FXYD domain-containing ion transport regulator 5
mm39_v1_chr7_+_126895423_126895447	0.168376	Rorc_Nr1d1	ENSMUST00000117762.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr18_+_35987791_35987803	0.167561	Rorc_Nr1d1	ENSMUST00000235404.2|Cxxc5|ENSMUSG00000046668.10|CXXC finger 5
mm39_v1_chr14_-_36657517_36657536	0.163487	Rorc_Nr1d1	ENSMUST00000183038.8|Ccser2|ENSMUSG00000058690.15|coiled-coil serine rich 2
mm39_v1_chr14_-_40730180_40730232	0.162171	Rorc_Nr1d1	ENSMUST00000136661.8|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A
mm39_v1_chr6_-_93890659_93890701	0.161377	Rorc_Nr1d1	ENSMUST00000093769.8|Magi1|ENSMUSG00000045095.17|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm39_v1_chr5_-_65492940_65493022	0.157813	Rorc_Nr1d1	ENSMUST00000203471.3|Rfc1|ENSMUSG00000029191.17|replication factor C (activator 1) 1	ENSMUST00000172732.8|Rfc1|ENSMUSG00000029191.17|replication factor C (activator 1) 1	ENSMUST00000204965.3|Rfc1|ENSMUSG00000029191.17|replication factor C (activator 1) 1
mm39_v1_chr11_+_95603494_95603529	0.157345	Rorc_Nr1d1	ENSMUST00000107717.8|Zfp652|ENSMUSG00000075595.10|zinc finger protein 652
mm39_v1_chr2_+_153133326_153133378	0.150821	Rorc_Nr1d1	ENSMUST00000028977.7|Kif3b|ENSMUSG00000027475.10|kinesin family member 3B
mm39_v1_chr17_-_45997132_45997194	0.142214	Rorc_Nr1d1	ENSMUST00000113523.9|Tmem63b|ENSMUSG00000036026.16|transmembrane protein 63b
mm39_v1_chr2_+_48839505_48839629	0.139427	Rorc_Nr1d1	ENSMUST00000112745.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5	ENSMUST00000112754.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5
mm39_v1_chr5_-_5564873_5564891	0.139168	Rorc_Nr1d1	ENSMUST00000060947.14|Cldn12|ENSMUSG00000046798.15|claudin 12
mm39_v1_chr12_-_72455708_72455828	0.138966	Rorc_Nr1d1	ENSMUST00000078505.14|Rtn1|ENSMUSG00000021087.19|reticulon 1
mm39_v1_chr9_+_75348800_75348857	0.135558	Rorc_Nr1d1	ENSMUST00000048937.6|Leo1|ENSMUSG00000042487.7|Leo1, Paf1/RNA polymerase II complex component
mm39_v1_chr9_+_65368207_65368276	0.130306	Rorc_Nr1d1	ENSMUST00000034955.8|Spg21|ENSMUSG00000032388.8|SPG21, maspardin	ENSMUST00000213957.2|Spg21|ENSMUSG00000032388.8|SPG21, maspardin
mm39_v1_chr4_-_116228921_116228941	0.128511	Rorc_Nr1d1	ENSMUST00000239239.2|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2	ENSMUST00000239177.2|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2
mm39_v1_chr2_+_152596075_152596106	0.127717	Rorc_Nr1d1	ENSMUST00000010020.12|Cox4i2|ENSMUSG00000009876.14|cytochrome c oxidase subunit 4I2
mm39_v1_chr11_-_3599673_3599673	0.116404	Rorc_Nr1d1	ENSMUST00000193809.2|Tug1|ENSMUSG00000056579.19|taurine upregulated gene 1
mm39_v1_chr17_-_34847354_34847484	0.114036	Rorc_Nr1d1	ENSMUST00000167097.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chr14_+_105496147_105496196	0.109856	Rorc_Nr1d1	ENSMUST00000138283.2|Ndfip2|ENSMUSG00000053253.17|Nedd4 family interacting protein 2
mm39_v1_chr13_+_104365432_104365500	0.107775	Rorc_Nr1d1	ENSMUST00000070761.10|Cenpk|ENSMUSG00000021714.16|centromere protein K	ENSMUST00000225557.2|Cenpk|ENSMUSG00000021714.16|centromere protein K
mm39_v1_chr6_-_30873669_30873729	0.107579	Rorc_Nr1d1	ENSMUST00000048774.13|Copg2|ENSMUSG00000025607.16|coatomer protein complex, subunit gamma 2	ENSMUST00000166192.7|Copg2|ENSMUSG00000025607.16|coatomer protein complex, subunit gamma 2
mm39_v1_chr17_-_34847013_34847034	0.101038	Rorc_Nr1d1	ENSMUST00000166040.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chr15_+_10486092_10486172	0.0889627	Rorc_Nr1d1	ENSMUST00000022856.15|Rad1|ENSMUSG00000022248.15|RAD1 checkpoint DNA exonuclease	ENSMUST00000100775.10|Rad1|ENSMUSG00000022248.15|RAD1 checkpoint DNA exonuclease	ENSMUST00000169519.8|Rad1|ENSMUSG00000022248.15|RAD1 checkpoint DNA exonuclease
mm39_v1_chr15_-_11996084_11996144	0.0849014	Rorc_Nr1d1	ENSMUST00000022816.15|Sub1|ENSMUSG00000022205.16|SUB1 homolog, transcriptional regulator
mm39_v1_chr15_-_98560739_98560793	0.0826059	Rorc_Nr1d1	ENSMUST00000162384.2|Ddx23|ENSMUSG00000003360.16|DEAD box helicase 23	ENSMUST00000003450.15|Ddx23|ENSMUSG00000003360.16|DEAD box helicase 23
mm39_v1_chr19_-_43928583_43928637	0.0804762	Rorc_Nr1d1	ENSMUST00000212396.2|Dnmbp|ENSMUSG00000025195.10|dynamin binding protein
mm39_v1_chr7_-_133833854_133833879	0.0801915	Rorc_Nr1d1	ENSMUST00000127524.2|Adam12|ENSMUSG00000054555.12|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm39_v1_chr3_-_103716593_103716760	0.0784873	Rorc_Nr1d1	ENSMUST00000063502.13|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106832.2|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106834.8|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000029435.15|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B
mm39_v1_chr11_+_58531220_58531291	0.0775632	Rorc_Nr1d1	ENSMUST00000075084.5|Trim58|ENSMUSG00000037124.7|tripartite motif-containing 58
mm39_v1_chr11_+_116089678_116089729	0.0774135	Rorc_Nr1d1	ENSMUST00000021130.7|Ten1|ENSMUSG00000020778.13|TEN1 telomerase capping complex subunit
mm39_v1_chr11_+_96822213_96822342	0.0757265	Rorc_Nr1d1	ENSMUST00000107633.2|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chr11_+_51989508_51989640	0.0746805	Rorc_Nr1d1	ENSMUST00000020608.3|Ppp2ca|ENSMUSG00000020349.5|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm39_v1_chr3_+_79791798_79791904	0.0644649	Rorc_Nr1d1	ENSMUST00000118853.8|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B	ENSMUST00000145992.2|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B
mm39_v1_chr14_-_55101505_55101615	0.0607492	Rorc_Nr1d1	ENSMUST00000142283.4|Homez|ENSMUSG00000057156.11|homeodomain leucine zipper-encoding gene
mm39_v1_chr12_-_34578842_34578903	0.0602006	Rorc_Nr1d1	ENSMUST00000110819.4|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chr7_-_99276310_99276310	0.0525247	Rorc_Nr1d1	ENSMUST00000178124.3|Tpbgl|ENSMUSG00000096606.3|trophoblast glycoprotein-like
mm39_v1_chr16_-_20549294_20549377	0.0508282	Rorc_Nr1d1	ENSMUST00000231826.2|Thpo|ENSMUSG00000022847.16|thrombopoietin	ENSMUST00000076422.13|Thpo|ENSMUSG00000022847.16|thrombopoietin	ENSMUST00000232217.2|Thpo|ENSMUSG00000022847.16|thrombopoietin
mm39_v1_chr6_-_124519240_124519318	0.0477773	Rorc_Nr1d1	ENSMUST00000159463.8|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1	ENSMUST00000162844.2|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1	ENSMUST00000160505.8|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1	ENSMUST00000162443.8|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1
mm39_v1_chr5_+_145020910_145020919	0.0471604	Rorc_Nr1d1	ENSMUST00000124379.3|Arpc1a|ENSMUSG00000029621.15|actin related protein 2/3 complex, subunit 1A
mm39_v1_chr11_-_51526697_51526723	0.0458785	Rorc_Nr1d1	ENSMUST00000001081.10|Rmnd5b|ENSMUSG00000001054.10|required for meiotic nuclear division 5 homolog B
mm39_v1_chr11_+_40624763_40624776	0.045441	Rorc_Nr1d1	ENSMUST00000127382.2|Nudcd2|ENSMUSG00000020328.11|NudC domain containing 2
mm39_v1_chr10_+_130158737_130158774	0.0438116	Rorc_Nr1d1	ENSMUST00000217702.2|Tespa1|ENSMUSG00000034833.11|thymocyte expressed, positive selection associated 1	ENSMUST00000042586.10|Tespa1|ENSMUSG00000034833.11|thymocyte expressed, positive selection associated 1	ENSMUST00000218605.2|Tespa1|ENSMUSG00000034833.11|thymocyte expressed, positive selection associated 1
mm39_v1_chr7_-_126224848_126224848	0.0429429	Rorc_Nr1d1	ENSMUST00000032961.4|Nupr1|ENSMUSG00000030717.10|nuclear protein transcription regulator 1
mm39_v1_chr5_+_145020640_145020725	0.0421361	Rorc_Nr1d1	ENSMUST00000031625.15|Arpc1a|ENSMUSG00000029621.15|actin related protein 2/3 complex, subunit 1A
mm39_v1_chr14_+_33775423_33775431	0.0343708	Rorc_Nr1d1	ENSMUST00000058725.5|Antxrl|ENSMUSG00000047441.5|anthrax toxin receptor-like
mm39_v1_chr5_-_65492907_65492935	0.0285249	Rorc_Nr1d1	ENSMUST00000203581.3|Rfc1|ENSMUSG00000029191.17|replication factor C (activator 1) 1
mm39_v1_chr1_+_86631510_86631565	0.0234539	Rorc_Nr1d1	ENSMUST00000168237.8|Dis3l2|ENSMUSG00000053333.16|DIS3 like 3'-5' exoribonuclease 2	ENSMUST00000065694.8|Dis3l2|ENSMUSG00000053333.16|DIS3 like 3'-5' exoribonuclease 2
mm39_v1_chr16_+_21828223_21828275	0.0209244	Rorc_Nr1d1	ENSMUST00000023561.8|Senp2|ENSMUSG00000022855.10|SUMO/sentrin specific peptidase 2
mm39_v1_chrX_-_37665041_37665081	0.0199364	Rorc_Nr1d1	ENSMUST00000050083.6|Cul4b|ENSMUSG00000031095.16|cullin 4B	ENSMUST00000115118.8|Cul4b|ENSMUSG00000031095.16|cullin 4B
mm39_v1_chr14_+_53100756_53100822	0.0193936	Rorc_Nr1d1	ENSMUST00000103616.5|Trav15d-1-dv6d-1|ENSMUSG00000096653.5|T cell receptor alpha variable 15D-1-DV6D-1	ENSMUST00000186370.2|Trav15d-1-dv6d-1|ENSMUSG00000096653.5|T cell receptor alpha variable 15D-1-DV6D-1
mm39_v1_chr11_-_4045343_4045445	0.0179156	Rorc_Nr1d1	ENSMUST00000004868.6|Mtfp1|ENSMUSG00000004748.6|mitochondrial fission process 1
mm39_v1_chr7_-_119461027_119461086	0.016543	Rorc_Nr1d1	ENSMUST00000137888.2|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	ENSMUST00000142120.2|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm39_v1_chr7_+_45683122_45683270	0.016185	Rorc_Nr1d1	ENSMUST00000033121.7|Nomo1|ENSMUSG00000030835.7|nodal modulator 1
mm39_v1_chr2_+_96148418_96148561	0.0138349	Rorc_Nr1d1	ENSMUST00000135431.8|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C	ENSMUST00000162807.9|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C
mm39_v1_chr16_-_44379226_44379260	0.00930185	Rorc_Nr1d1	ENSMUST00000114634.3|Boc|ENSMUSG00000022687.13|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm39_v1_chr2_-_152857239_152857347	0.00581581	Rorc_Nr1d1	ENSMUST00000028972.9|Pdrg1|ENSMUSG00000027472.15|p53 and DNA damage regulated 1
mm39_v1_chr11_-_99176086_99176090	0.0030392	Rorc_Nr1d1	ENSMUST00000017255.4|Krt24|ENSMUSG00000020913.4|keratin 24
mm39_v1_chr1_-_131161312_131161417	0.00295417	Rorc_Nr1d1	ENSMUST00000212202.2|Rassf5|ENSMUSG00000026430.17|Ras association (RalGDS/AF-6) domain family member 5
mm39_v1_chr6_+_71176811_71176872	0.00135844	Rorc_Nr1d1	ENSMUST00000067492.8|Fabp1|ENSMUSG00000054422.8|fatty acid binding protein 1, liver
