mm39_v1_chr10_+_43455157_43455174	50.3006	Sox2	ENSMUST00000058714.10|Cd24a|ENSMUSG00000047139.10|CD24a antigen
mm39_v1_chr10_+_43455919_43455941	50.2804	Sox2	ENSMUST00000214476.2|Cd24a|ENSMUSG00000047139.10|CD24a antigen
mm39_v1_chr5_-_134944366_134944399	40.1217	Sox2	ENSMUST00000008987.5|Cldn13|ENSMUSG00000008843.5|claudin 13
mm39_v1_chr4_+_114914880_114915008	31.8226	Sox2	ENSMUST00000161601.8|Tal1|ENSMUSG00000028717.13|T cell acute lymphocytic leukemia 1
mm39_v1_chr7_-_142215027_142215050	30.2239	Sox2	ENSMUST00000105936.8|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr10_-_37014859_37014933	29.6503	Sox2	ENSMUST00000092584.6|Marcks|ENSMUSG00000069662.6|myristoylated alanine rich protein kinase C substrate
mm39_v1_chr3_+_14951264_14951380	24.5304	Sox2	ENSMUST00000192609.6|Car2|ENSMUSG00000027562.13|carbonic anhydrase 2
mm39_v1_chr15_-_103159892_103160081	24.5176	Sox2	ENSMUST00000133600.8|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2	ENSMUST00000134554.2|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2	ENSMUST00000156927.8|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2
mm39_v1_chr16_+_36097313_36097435	23.4694	Sox2	ENSMUST00000232150.2|Stfa1|ENSMUSG00000071562.7|stefin A1
mm39_v1_chr7_-_126831803_126831826	22.458	Sox2	ENSMUST00000133913.8|Septin1|ENSMUSG00000000486.14|septin 1
mm39_v1_chr1_-_132318039_132318105	22.2655	Sox2	ENSMUST00000132435.2|Tmcc2|ENSMUSG00000042066.17|transmembrane and coiled-coil domains 2
mm39_v1_chr4_+_135899678_135899738	22.0258	Sox2	ENSMUST00000061721.6|E2f2|ENSMUSG00000018983.10|E2F transcription factor 2
mm39_v1_chr12_-_36092475_36092516	21.8699	Sox2	ENSMUST00000020896.17|Tspan13|ENSMUSG00000020577.18|tetraspanin 13
mm39_v1_chr7_-_120581535_120581556	21.6759	Sox2	ENSMUST00000033169.9|Cdr2|ENSMUSG00000030878.12|cerebellar degeneration-related 2
mm39_v1_chr3_-_98767090_98767116	21.3207	Sox2	ENSMUST00000107016.10|Hsd3b1|ENSMUSG00000027871.17|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	ENSMUST00000029465.10|Hsd3b1|ENSMUSG00000027871.17|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
mm39_v1_chr7_+_100142544_100142593	21.1022	Sox2	ENSMUST00000126534.8|Ucp2|ENSMUSG00000033685.14|uncoupling protein 2 (mitochondrial, proton carrier)	ENSMUST00000207748.2|Ucp2|ENSMUSG00000033685.14|uncoupling protein 2 (mitochondrial, proton carrier)
mm39_v1_chr15_-_103160082_103160127	21.0492	Sox2	ENSMUST00000149111.8|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2	ENSMUST00000132836.8|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2
mm39_v1_chr3_+_14951478_14951488	20.8104	Sox2	ENSMUST00000029078.9|Car2|ENSMUSG00000027562.13|carbonic anhydrase 2
mm39_v1_chr7_+_99184858_99184981	19.7819	Sox2	ENSMUST00000032995.15|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000162404.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr16_-_36188086_36188128	19.612	Sox2	ENSMUST00000096089.3|Cstdc5|ENSMUSG00000071561.3|cystatin domain containing 5
mm39_v1_chr13_+_117356808_117356848	19.1007	Sox2	ENSMUST00000022242.9|Emb|ENSMUSG00000021728.9|embigin
mm39_v1_chr17_+_12338161_12338235	18.9951	Sox2	ENSMUST00000024594.9|Agpat4|ENSMUSG00000023827.9|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm39_v1_chr13_-_55635851_55635924	18.6612	Sox2	ENSMUST00000109921.9|Dbn1|ENSMUSG00000034675.18|drebrin 1	ENSMUST00000109923.9|Dbn1|ENSMUSG00000034675.18|drebrin 1	ENSMUST00000021950.15|Dbn1|ENSMUSG00000034675.18|drebrin 1
mm39_v1_chr19_+_44282113_44282113	18.0604	Sox2	ENSMUST00000026221.7|Scd2|ENSMUSG00000025203.7|stearoyl-Coenzyme A desaturase 2
mm39_v1_chr2_+_13579092_13579127	17.9764	Sox2	ENSMUST00000193675.2|Vim|ENSMUSG00000026728.10|vimentin
mm39_v1_chr9_+_110867807_110867873	17.5259	Sox2	ENSMUST00000197575.2|Ltf|ENSMUSG00000032496.8|lactotransferrin
mm39_v1_chr4_-_131776368_131776468	17.4815	Sox2	ENSMUST00000105981.9|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1	ENSMUST00000084253.10|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1	ENSMUST00000141291.3|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1
mm39_v1_chr7_+_44865177_44865276	17.1582	Sox2	ENSMUST00000033060.14|Tead2|ENSMUSG00000030796.18|TEA domain family member 2	ENSMUST00000210447.2|Tead2|ENSMUSG00000030796.18|TEA domain family member 2	ENSMUST00000211744.2|Tead2|ENSMUSG00000030796.18|TEA domain family member 2	ENSMUST00000107801.10|Tead2|ENSMUSG00000030796.18|TEA domain family member 2
mm39_v1_chr7_+_99184645_99184709	16.8499	Sox2	ENSMUST00000098266.9|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000179755.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr3_-_84387700_84387764	16.8135	Sox2	ENSMUST00000194027.2|Fhdc1|ENSMUSG00000041842.16|FH2 domain containing 1	ENSMUST00000107689.7|Fhdc1|ENSMUSG00000041842.16|FH2 domain containing 1
mm39_v1_chr6_-_83504471_83504482	16.7106	Sox2	ENSMUST00000141904.8|Actg2|ENSMUSG00000059430.15|actin, gamma 2, smooth muscle, enteric
mm39_v1_chr14_-_70855980_70856014	16.1513	Sox2	ENSMUST00000228001.2|Dmtn|ENSMUSG00000022099.18|dematin actin binding protein
mm39_v1_chr15_+_73620213_73620235	16.128	Sox2	ENSMUST00000053232.8|Ptp4a3|ENSMUSG00000059895.14|protein tyrosine phosphatase 4a3
mm39_v1_chr2_-_131001916_131002001	15.4631	Sox2	ENSMUST00000103188.10|1700037H04Rik|ENSMUSG00000027327.17|RIKEN cDNA 1700037H04 gene	ENSMUST00000133602.8|1700037H04Rik|ENSMUSG00000027327.17|RIKEN cDNA 1700037H04 gene	ENSMUST00000028800.12|1700037H04Rik|ENSMUSG00000027327.17|RIKEN cDNA 1700037H04 gene
mm39_v1_chr17_-_79662514_79662525	15.2835	Sox2	ENSMUST00000068958.9|Cdc42ep3|ENSMUSG00000036533.10|CDC42 effector protein (Rho GTPase binding) 3
mm39_v1_chr15_-_103163860_103163879	15.1523	Sox2	ENSMUST00000075192.13|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2
mm39_v1_chr11_+_78192355_78192432	15.0706	Sox2	ENSMUST00000045026.4|Spag5|ENSMUSG00000002055.10|sperm associated antigen 5
mm39_v1_chr11_+_11636213_11636284	14.6118	Sox2	ENSMUST00000076700.11|Ikzf1|ENSMUSG00000018654.18|IKAROS family zinc finger 1	ENSMUST00000048122.13|Ikzf1|ENSMUSG00000018654.18|IKAROS family zinc finger 1
mm39_v1_chr12_+_24758724_24758769	14.5837	Sox2	ENSMUST00000153058.8|Rrm2|ENSMUSG00000020649.12|ribonucleotide reductase M2
mm39_v1_chr12_+_24758968_24759028	14.4843	Sox2	ENSMUST00000154588.2|Rrm2|ENSMUSG00000020649.12|ribonucleotide reductase M2
mm39_v1_chr3_-_20329823_20329897	14.3822	Sox2	ENSMUST00000011607.6|Cpb1|ENSMUSG00000011463.6|carboxypeptidase B1 (tissue)
mm39_v1_chr1_+_82817388_82817455	14.2176	Sox2	ENSMUST00000190052.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000063380.11|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000187899.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000186302.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000190046.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr4_+_140737955_140738007	14.1485	Sox2	ENSMUST00000071977.9|Mfap2|ENSMUSG00000060572.18|microfibrillar-associated protein 2
mm39_v1_chr12_+_24758240_24758291	14.0234	Sox2	ENSMUST00000020980.12|Rrm2|ENSMUSG00000020649.12|ribonucleotide reductase M2
mm39_v1_chr7_+_44866095_44866119	13.8417	Sox2	ENSMUST00000209437.2|Tead2|ENSMUSG00000030796.18|TEA domain family member 2
mm39_v1_chr5_-_138169253_138169296	13.3045	Sox2	ENSMUST00000139983.8|Mcm7|ENSMUSG00000029730.17|minichromosome maintenance complex component 7
mm39_v1_chr6_+_86605146_86605190	13.1332	Sox2	ENSMUST00000043400.9|Asprv1|ENSMUSG00000033508.9|aspartic peptidase, retroviral-like 1
mm39_v1_chrX_-_165992145_165992168	12.9913	Sox2	ENSMUST00000112176.8|Tmsb4x|ENSMUSG00000049775.17|thymosin, beta 4, X chromosome
mm39_v1_chr2_+_120307390_120307457	12.9497	Sox2	ENSMUST00000110716.9|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000028748.14|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000090028.13|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000110719.4|Capn3|ENSMUSG00000079110.13|calpain 3
mm39_v1_chr11_+_61967821_61967927	12.929	Sox2	ENSMUST00000092415.9|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000201015.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000202744.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000201723.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000202179.2|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1
mm39_v1_chr17_+_36176485_36176735	12.9028	Sox2	ENSMUST00000127442.8|Ppp1r18|ENSMUSG00000034595.18|protein phosphatase 1, regulatory subunit 18	ENSMUST00000144382.8|Ppp1r18|ENSMUSG00000034595.18|protein phosphatase 1, regulatory subunit 18
mm39_v1_chr11_+_69737437_69737476	12.8505	Sox2	ENSMUST00000152566.8|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3	ENSMUST00000108633.9|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3
mm39_v1_chr7_+_100142977_100143021	12.607	Sox2	ENSMUST00000129324.8|Ucp2|ENSMUSG00000033685.14|uncoupling protein 2 (mitochondrial, proton carrier)
mm39_v1_chr3_-_83947416_83947482	12.5788	Sox2	ENSMUST00000192095.6|Tmem131l|ENSMUSG00000033767.15|transmembrane 131 like	ENSMUST00000191758.6|Tmem131l|ENSMUSG00000033767.15|transmembrane 131 like	ENSMUST00000052342.9|Tmem131l|ENSMUSG00000033767.15|transmembrane 131 like
mm39_v1_chr5_-_138169509_138169536	12.4911	Sox2	ENSMUST00000153867.8|Mcm7|ENSMUSG00000029730.17|minichromosome maintenance complex component 7
mm39_v1_chr11_+_69737491_69737502	12.379	Sox2	ENSMUST00000019605.4|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3
mm39_v1_chr1_+_39940189_39940390	12.1573	Sox2	ENSMUST00000191761.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000193682.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000195860.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000195259.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000195636.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000192509.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4
mm39_v1_chr11_-_11987391_11987407	12.1144	Sox2	ENSMUST00000093321.12|Grb10|ENSMUSG00000020176.18|growth factor receptor bound protein 10
mm39_v1_chr11_-_11920540_11920642	11.9103	Sox2	ENSMUST00000109653.8|Grb10|ENSMUSG00000020176.18|growth factor receptor bound protein 10
mm39_v1_chr9_-_103357564_103357619	11.7914	Sox2	ENSMUST00000124310.5|Bfsp2|ENSMUSG00000032556.12|beaded filament structural protein 2, phakinin
mm39_v1_chr8_+_95703728_95703751	11.769	Sox2	ENSMUST00000179619.9|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr9_+_96140781_96140838	11.7202	Sox2	ENSMUST00000190104.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000179416.8|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000189606.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr11_+_11635908_11635949	11.5342	Sox2	ENSMUST00000065433.12|Ikzf1|ENSMUSG00000018654.18|IKAROS family zinc finger 1
mm39_v1_chr2_-_152672535_152672600	11.4667	Sox2	ENSMUST00000146380.2|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1	ENSMUST00000134902.2|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1	ENSMUST00000134357.2|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1	ENSMUST00000109820.5|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1
mm39_v1_chr15_-_78449172_78449230	11.3457	Sox2	ENSMUST00000230952.2|Rac2|ENSMUSG00000033220.8|Rac family small GTPase 2
mm39_v1_chr16_+_10884156_10884247	11.2926	Sox2	ENSMUST00000089011.6|Snn|ENSMUSG00000037972.8|stannin
mm39_v1_chr9_+_20940669_20940751	11.28	Sox2	ENSMUST00000001040.7|Icam4|ENSMUSG00000001014.7|intercellular adhesion molecule 4, Landsteiner-Wiener blood group	ENSMUST00000215077.2|Icam4|ENSMUSG00000001014.7|intercellular adhesion molecule 4, Landsteiner-Wiener blood group
mm39_v1_chr2_+_157401998_157402050	11.0516	Sox2	ENSMUST00000153739.9|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173595.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000109526.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173839.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173041.8|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173793.8|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000172487.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000088484.6|Nnat|ENSMUSG00000067786.17|neuronatin
mm39_v1_chr11_+_94900677_94900716	11.0127	Sox2	ENSMUST00000055947.10|Samd14|ENSMUSG00000047181.13|sterile alpha motif domain containing 14
mm39_v1_chr7_+_100143250_100143304	11.0055	Sox2	ENSMUST00000153287.8|Ucp2|ENSMUSG00000033685.14|uncoupling protein 2 (mitochondrial, proton carrier)
mm39_v1_chr4_+_43957677_43957736	10.8493	Sox2	ENSMUST00000107855.2|Glipr2|ENSMUSG00000028480.15|GLI pathogenesis-related 2
mm39_v1_chr17_+_36176948_36176977	10.7605	Sox2	ENSMUST00000122899.8|Ppp1r18|ENSMUSG00000034595.18|protein phosphatase 1, regulatory subunit 18
mm39_v1_chr2_+_84564394_84564451	10.7592	Sox2	ENSMUST00000238573.2|Ypel4|ENSMUSG00000034059.15|yippee like 4	ENSMUST00000090729.9|Ypel4|ENSMUSG00000034059.15|yippee like 4
mm39_v1_chr16_-_18448614_18448704	10.7119	Sox2	ENSMUST00000231956.2|Septin5|ENSMUSG00000072214.8|septin 5	ENSMUST00000096987.7|Septin5|ENSMUSG00000072214.8|septin 5
mm39_v1_chr17_-_36149142_36149198	10.6212	Sox2	ENSMUST00000001566.10|Tubb5|ENSMUSG00000001525.11|tubulin, beta 5 class I
mm39_v1_chr2_-_153079828_153079854	10.5909	Sox2	ENSMUST00000109795.2|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr8_+_95720864_95720929	10.5575	Sox2	ENSMUST00000212141.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr4_-_128699838_128699966	10.4684	Sox2	ENSMUST00000106072.9|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362	ENSMUST00000170934.3|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362
mm39_v1_chr12_-_55033130_55033314	10.4057	Sox2	ENSMUST00000173433.8|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A	ENSMUST00000173803.2|Gm20403|ENSMUSG00000092233.2|predicted gene 20403
mm39_v1_chr1_+_136059101_136059142	10.4017	Sox2	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chr8_+_95721019_95721106	10.3011	Sox2	ENSMUST00000212976.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1	ENSMUST00000212995.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr5_+_143534455_143534516	10.2996	Sox2	ENSMUST00000169329.8|Fam220a|ENSMUSG00000118332.2|family with sequence similarity 220, member A	ENSMUST00000067145.12|Fam220a|ENSMUSG00000118332.2|family with sequence similarity 220, member A	ENSMUST00000119488.2|Fam220a|ENSMUSG00000118332.2|family with sequence similarity 220, member A	ENSMUST00000200267.2|Fam220a|ENSMUSG00000083012.10|family with sequence similarity 220, member A	ENSMUST00000118121.2|Fam220a|ENSMUSG00000118332.2|family with sequence similarity 220, member A	ENSMUST00000196487.2|Fam220a|ENSMUSG00000083012.10|family with sequence similarity 220, member A
mm39_v1_chr11_-_106050927_106050994	10.2012	Sox2	ENSMUST00000045923.10|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr4_-_155013002_155013030	10.1309	Sox2	ENSMUST00000152687.8|Tnfrsf14|ENSMUSG00000042333.17|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)	ENSMUST00000137803.8|Tnfrsf14|ENSMUSG00000042333.17|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)	ENSMUST00000145296.2|Tnfrsf14|ENSMUSG00000042333.17|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
mm39_v1_chr17_-_36149100_36149135	10.0684	Sox2	ENSMUST00000134978.3|Tubb5|ENSMUSG00000001525.11|tubulin, beta 5 class I
mm39_v1_chr5_+_33978035_33978173	9.98679	Sox2	ENSMUST00000075812.11|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2	ENSMUST00000114397.9|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2	ENSMUST00000155880.8|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2
mm39_v1_chr7_-_115637970_115637985	9.94525	Sox2	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr8_+_95721378_95721416	9.87321	Sox2	ENSMUST00000212956.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1	ENSMUST00000212531.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr2_+_131333800_131333864	9.76353	Sox2	ENSMUST00000110179.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110189.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110182.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110183.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110186.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110188.8|Smox|ENSMUSG00000027333.19|spermine oxidase
mm39_v1_chr7_+_24596806_24596941	9.70759	Sox2	ENSMUST00000003469.8|Cd79a|ENSMUSG00000003379.8|CD79A antigen (immunoglobulin-associated alpha)
mm39_v1_chr6_-_72935382_72935421	9.57175	Sox2	ENSMUST00000144337.2|Tmsb10|ENSMUSG00000079523.9|thymosin, beta 10
mm39_v1_chr6_+_125529911_125529943	9.53714	Sox2	ENSMUST00000112254.8|Vwf|ENSMUSG00000001930.18|Von Willebrand factor	ENSMUST00000112253.6|Vwf|ENSMUSG00000001930.18|Von Willebrand factor
mm39_v1_chr5_-_100186728_100186744	9.50122	Sox2	ENSMUST00000153442.8|Hnrnpdl|ENSMUSG00000029328.16|heterogeneous nuclear ribonucleoprotein D-like
mm39_v1_chr11_-_46203047_46203185	9.48387	Sox2	ENSMUST00000129474.2|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2	ENSMUST00000093166.11|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2	ENSMUST00000165599.9|Cyfip2|ENSMUSG00000020340.17|cytoplasmic FMR1 interacting protein 2
mm39_v1_chr4_+_114914607_114914635	9.3418	Sox2	ENSMUST00000136946.8|Tal1|ENSMUSG00000028717.13|T cell acute lymphocytic leukemia 1
mm39_v1_chrX_+_92698469_92698587	9.2464	Sox2	ENSMUST00000113933.9|Pcyt1b|ENSMUSG00000035246.17|phosphate cytidylyltransferase 1, choline, beta isoform
mm39_v1_chr4_+_62883796_62883854	9.2124	Sox2	ENSMUST00000030043.13|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000107415.8|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000064814.6|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618
mm39_v1_chr12_+_108572015_108572072	9.14982	Sox2	ENSMUST00000109854.9|Evl|ENSMUSG00000021262.16|Ena-vasodilator stimulated phosphoprotein
mm39_v1_chr18_+_34757687_34757788	9.13954	Sox2	ENSMUST00000237407.2|Kif20a|ENSMUSG00000003779.17|kinesin family member 20A
mm39_v1_chr12_-_55033113_55033128	9.0986	Sox2	ENSMUST00000038926.13|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A
mm39_v1_chr6_-_39396691_39396735	9.0288	Sox2	ENSMUST00000146785.8|Mkrn1|ENSMUSG00000029922.16|makorin, ring finger protein, 1	ENSMUST00000114823.8|Mkrn1|ENSMUSG00000029922.16|makorin, ring finger protein, 1
mm39_v1_chr7_-_103502404_103502423	8.95883	Sox2	ENSMUST00000033229.5|Hbb-y|ENSMUSG00000052187.5|hemoglobin Y, beta-like embryonic chain
mm39_v1_chr18_+_34758062_34758090	8.87571	Sox2	ENSMUST00000166044.3|Kif20a|ENSMUSG00000003779.17|kinesin family member 20A
mm39_v1_chr5_-_140634773_140634807	8.80445	Sox2	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr16_-_16942970_16943010	8.70173	Sox2	ENSMUST00000093336.8|2610318N02Rik|ENSMUSG00000049916.13|RIKEN cDNA 2610318N02 gene	ENSMUST00000231681.2|2610318N02Rik|ENSMUSG00000049916.13|RIKEN cDNA 2610318N02 gene
mm39_v1_chr17_+_25517363_25517377	8.69033	Sox2	ENSMUST00000037453.4|Prss34|ENSMUSG00000056399.3|protease, serine 34
mm39_v1_chr16_+_17051423_17051528	8.66946	Sox2	ENSMUST00000090190.14|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2	ENSMUST00000232426.2|Gm49573|ENSMUSG00000116743.2|predicted gene, 49573	ENSMUST00000232082.2|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2
mm39_v1_chr17_+_43327412_43327482	8.66014	Sox2	ENSMUST00000024708.6|Tnfrsf21|ENSMUSG00000023915.6|tumor necrosis factor receptor superfamily, member 21
mm39_v1_chr7_-_100164007_100164167	8.65018	Sox2	ENSMUST00000207405.2|Dnajb13|ENSMUSG00000030708.15|DnaJ heat shock protein family (Hsp40) member B13
mm39_v1_chr18_+_34757666_34757683	8.59402	Sox2	ENSMUST00000167161.9|Kif20a|ENSMUSG00000003779.17|kinesin family member 20A
mm39_v1_chr6_-_72935468_72935479	8.57249	Sox2	ENSMUST00000114050.8|Tmsb10|ENSMUSG00000079523.9|thymosin, beta 10
mm39_v1_chrX_-_142610371_142610410	8.56497	Sox2	ENSMUST00000087316.6|Capn6|ENSMUSG00000067276.6|calpain 6
mm39_v1_chr11_+_94901104_94901119	8.55571	Sox2	ENSMUST00000124735.2|Samd14|ENSMUSG00000047181.13|sterile alpha motif domain containing 14
mm39_v1_chr10_+_41352310_41352390	8.48073	Sox2	ENSMUST00000019967.16|Mical1|ENSMUSG00000019823.18|microtubule associated monooxygenase, calponin and LIM domain containing 1	ENSMUST00000119962.8|Mical1|ENSMUSG00000019823.18|microtubule associated monooxygenase, calponin and LIM domain containing 1	ENSMUST00000099934.11|Mical1|ENSMUSG00000019823.18|microtubule associated monooxygenase, calponin and LIM domain containing 1
mm39_v1_chr10_+_128745214_128745313	8.47001	Sox2	ENSMUST00000220308.2|Cd63|ENSMUSG00000025351.15|CD63 antigen
mm39_v1_chr11_+_69471219_69471248	8.45633	Sox2	ENSMUST00000108657.4|Trp53|ENSMUSG00000059552.14|transformation related protein 53
mm39_v1_chr11_-_106050724_106050753	8.44636	Sox2	ENSMUST00000064545.11|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr7_-_83533497_83533523	8.42987	Sox2	ENSMUST00000094216.5|Tlnrd1|ENSMUSG00000070462.5|talin rod domain containing 1
mm39_v1_chr6_-_72935171_72935285	8.41912	Sox2	ENSMUST00000114049.2|Tmsb10|ENSMUSG00000079523.9|thymosin, beta 10
mm39_v1_chr11_+_58839716_58839746	8.40473	Sox2	ENSMUST00000078267.5|H2bu2|ENSMUSG00000056895.5|H2B.U histone 2
mm39_v1_chr17_+_47816042_47816057	8.375	Sox2	ENSMUST00000183044.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3	ENSMUST00000037333.17|Ccnd3|ENSMUSG00000034165.17|cyclin D3
mm39_v1_chr6_-_83504756_83504792	8.32489	Sox2	ENSMUST00000152029.2|Actg2|ENSMUSG00000059430.15|actin, gamma 2, smooth muscle, enteric
mm39_v1_chr4_+_129407374_129407437	8.24216	Sox2	ENSMUST00000062356.7|Marcksl1|ENSMUSG00000047945.7|MARCKS-like 1
mm39_v1_chr2_-_152673032_152673246	8.19641	Sox2	ENSMUST00000128172.3|Bcl2l1|ENSMUSG00000007659.19|BCL2-like 1
mm39_v1_chr17_+_47815968_47815991	8.17758	Sox2	ENSMUST00000182129.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3	ENSMUST00000171031.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3
mm39_v1_chr17_+_47816074_47816091	8.14189	Sox2	ENSMUST00000183177.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3	ENSMUST00000182848.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3
mm39_v1_chr4_-_132073048_132073058	8.09791	Sox2	ENSMUST00000084250.11|Rcc1|ENSMUSG00000028896.14|regulator of chromosome condensation 1
mm39_v1_chr5_-_44256528_44256536	8.08622	Sox2	ENSMUST00000196178.2|Prom1|ENSMUSG00000029086.16|prominin 1	ENSMUST00000197750.5|Prom1|ENSMUSG00000029086.16|prominin 1
mm39_v1_chr19_-_46321218_46321231	8.03599	Sox2	ENSMUST00000238062.2|Cuedc2|ENSMUSG00000036748.17|CUE domain containing 2
mm39_v1_chr16_+_16964801_16964849	8.02479	Sox2	ENSMUST00000232479.2|Ydjc|ENSMUSG00000041774.17|YdjC homolog (bacterial)	ENSMUST00000232344.2|Ydjc|ENSMUSG00000041774.17|YdjC homolog (bacterial)	ENSMUST00000069064.7|Ydjc|ENSMUSG00000041774.17|YdjC homolog (bacterial)
mm39_v1_chr5_+_35106778_35106848	7.9667	Sox2	ENSMUST00000030984.14|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr11_+_69471185_69471208	7.94476	Sox2	ENSMUST00000171247.8|Trp53|ENSMUSG00000059552.14|transformation related protein 53	ENSMUST00000108658.10|Trp53|ENSMUSG00000059552.14|transformation related protein 53	ENSMUST00000005371.12|Trp53|ENSMUSG00000059552.14|transformation related protein 53
mm39_v1_chr2_+_4564553_4564621	7.9095	Sox2	ENSMUST00000176828.8|Frmd4a|ENSMUSG00000026657.18|FERM domain containing 4A
mm39_v1_chr11_+_116421923_116421947	7.8846	Sox2	ENSMUST00000138840.8|Sphk1|ENSMUSG00000061878.17|sphingosine kinase 1
mm39_v1_chr2_+_131333866_131333913	7.87954	Sox2	ENSMUST00000110181.8|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110180.2|Smox|ENSMUSG00000027333.19|spermine oxidase
mm39_v1_chr17_-_80514725_80514741	7.81334	Sox2	ENSMUST00000234696.2|Srsf7|ENSMUSG00000024097.12|serine and arginine-rich splicing factor 7	ENSMUST00000235069.2|Srsf7|ENSMUSG00000024097.12|serine and arginine-rich splicing factor 7	ENSMUST00000063417.11|Srsf7|ENSMUSG00000024097.12|serine and arginine-rich splicing factor 7
mm39_v1_chr19_-_47907705_47907744	7.80295	Sox2	ENSMUST00000095998.7|Itprip|ENSMUSG00000117975.2|inositol 1,4,5-triphosphate receptor interacting protein
mm39_v1_chr17_+_47816137_47816166	7.79804	Sox2	ENSMUST00000182935.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3	ENSMUST00000182506.8|Ccnd3|ENSMUSG00000034165.17|cyclin D3
mm39_v1_chr10_-_62363217_62363241	7.74841	Sox2	ENSMUST00000160987.8|Srgn|ENSMUSG00000020077.15|serglycin
mm39_v1_chr16_-_16939548_16939624	7.7362	Sox2	ENSMUST00000231297.2|2610318N02Rik|ENSMUSG00000049916.13|RIKEN cDNA 2610318N02 gene	ENSMUST00000231558.2|2610318N02Rik|ENSMUSG00000049916.13|RIKEN cDNA 2610318N02 gene
mm39_v1_chr15_+_79578141_79578186	7.72079	Sox2	ENSMUST00000230898.2|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1	ENSMUST00000229046.2|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1
mm39_v1_chr17_-_31348576_31348620	7.69234	Sox2	ENSMUST00000024827.5|Tff3|ENSMUSG00000024029.5|trefoil factor 3, intestinal
mm39_v1_chr11_-_86999481_86999545	7.63657	Sox2	ENSMUST00000051395.9|Prr11|ENSMUSG00000020493.9|proline rich 11
mm39_v1_chr13_+_52737473_52737485	7.60996	Sox2	ENSMUST00000118756.8|Syk|ENSMUSG00000021457.15|spleen tyrosine kinase
mm39_v1_chr13_-_58549079_58549405	7.51892	Sox2	ENSMUST00000224524.2|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K	ENSMUST00000224030.2|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K	ENSMUST00000224342.2|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K
mm39_v1_chr7_-_115423934_115423987	7.5061	Sox2	ENSMUST00000169129.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr10_-_84369831_84369926	7.43154	Sox2	ENSMUST00000167671.2|Ckap4|ENSMUSG00000046841.6|cytoskeleton-associated protein 4	ENSMUST00000053871.5|Ckap4|ENSMUSG00000046841.6|cytoskeleton-associated protein 4
mm39_v1_chr19_-_46028060_46028102	7.40591	Sox2	ENSMUST00000056931.14|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chr14_-_70945434_70945486	7.40421	Sox2	ENSMUST00000228346.2|Xpo7|ENSMUSG00000022100.15|exportin 7
mm39_v1_chr16_-_19801781_19801788	7.37752	Sox2	ENSMUST00000058839.10|Klhl6|ENSMUSG00000043008.10|kelch-like 6
mm39_v1_chr18_-_6516089_6516108	7.25847	Sox2	ENSMUST00000115870.9|Epc1|ENSMUSG00000024240.14|enhancer of polycomb homolog 1
mm39_v1_chr14_-_71003973_71004005	7.24789	Sox2	ENSMUST00000226448.2|Xpo7|ENSMUSG00000022100.15|exportin 7	ENSMUST00000022696.8|Xpo7|ENSMUSG00000022100.15|exportin 7
mm39_v1_chr15_-_79326200_79326267	7.18289	Sox2	ENSMUST00000117786.9|Csnk1e|ENSMUSG00000022433.22|casein kinase 1, epsilon	ENSMUST00000120859.9|Csnk1e|ENSMUSG00000022433.22|casein kinase 1, epsilon
mm39_v1_chr17_-_48716756_48716934	7.17542	Sox2	ENSMUST00000160319.8|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000159535.2|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000078800.13|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000046719.14|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000162460.8|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha
mm39_v1_chr5_-_44256562_44256574	7.16596	Sox2	ENSMUST00000165909.8|Prom1|ENSMUSG00000029086.16|prominin 1
mm39_v1_chr5_+_142946598_142946746	7.12763	Sox2	ENSMUST00000129306.4|Fscn1|ENSMUSG00000029581.15|fascin actin-bundling protein 1
mm39_v1_chr5_-_22549688_22549708	7.11852	Sox2	ENSMUST00000062372.14|Reln|ENSMUSG00000042453.15|reelin	ENSMUST00000161356.8|Reln|ENSMUSG00000042453.15|reelin
mm39_v1_chrX_+_70600481_70600552	7.10018	Sox2	ENSMUST00000123100.2|Hmgb3|ENSMUSG00000015217.12|high mobility group box 3
mm39_v1_chr6_+_17065141_17065223	7.09444	Sox2	ENSMUST00000115467.11|Tes|ENSMUSG00000029552.20|testin LIM domain protein	ENSMUST00000154266.3|Tes|ENSMUSG00000029552.20|testin LIM domain protein	ENSMUST00000076654.9|Tes|ENSMUSG00000029552.20|testin LIM domain protein
mm39_v1_chr11_-_106051533_106051686	7.03733	Sox2	ENSMUST00000106875.2|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr5_+_142946098_142946131	7.03536	Sox2	ENSMUST00000031565.15|Fscn1|ENSMUSG00000029581.15|fascin actin-bundling protein 1	ENSMUST00000198017.5|Fscn1|ENSMUSG00000029581.15|fascin actin-bundling protein 1
mm39_v1_chr1_+_135945705_135945781	7.02615	Sox2	ENSMUST00000063719.15|Tmem9|ENSMUSG00000026411.18|transmembrane protein 9
mm39_v1_chr10_-_80269436_80269488	7.00096	Sox2	ENSMUST00000105346.10|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000020377.13|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105340.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000020379.13|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105344.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105342.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105345.10|Tcf3|ENSMUSG00000020167.15|transcription factor 3	ENSMUST00000105343.8|Tcf3|ENSMUSG00000020167.15|transcription factor 3
mm39_v1_chrX_-_165992311_165992475	6.99075	Sox2	ENSMUST00000112172.4|Tmsb4x|ENSMUSG00000049775.17|thymosin, beta 4, X chromosome
mm39_v1_chr19_-_46027881_46027920	6.98385	Sox2	ENSMUST00000137771.2|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chr2_+_131333672_131333684	6.97067	Sox2	ENSMUST00000028806.12|Smox|ENSMUSG00000027333.19|spermine oxidase
mm39_v1_chr6_-_41423004_41423079	6.92268	Sox2	ENSMUST00000095999.7|Gm10334|ENSMUSG00000071517.7|predicted gene 10334
mm39_v1_chr15_-_98851423_98851441	6.90831	Sox2	ENSMUST00000134214.3|Gm49450|ENSMUSG00000116358.2|predicted gene, 49450
mm39_v1_chr11_-_117670430_117670476	6.86167	Sox2	ENSMUST00000143406.8|Tmc6|ENSMUSG00000025572.19|transmembrane channel-like gene family 6
mm39_v1_chr7_+_89780785_89780853	6.79028	Sox2	ENSMUST00000208684.2|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein
mm39_v1_chr8_-_11362731_11362826	6.72039	Sox2	ENSMUST00000033898.10|Col4a1|ENSMUSG00000031502.12|collagen, type IV, alpha 1
mm39_v1_chr18_+_56840813_56841028	6.70713	Sox2	ENSMUST00000025486.9|Lmnb1|ENSMUSG00000024590.9|lamin B1
mm39_v1_chr7_-_141649003_141649043	6.70375	Sox2	ENSMUST00000039926.10|Dusp8|ENSMUSG00000037887.12|dual specificity phosphatase 8
mm39_v1_chr6_-_47571901_47571981	6.69221	Sox2	ENSMUST00000081721.13|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114618.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114616.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit
mm39_v1_chr7_-_24705320_24705383	6.6654	Sox2	ENSMUST00000102858.10|Atp1a3|ENSMUSG00000040907.16|ATPase, Na+/K+ transporting, alpha 3 polypeptide	ENSMUST00000196684.2|Atp1a3|ENSMUSG00000040907.16|ATPase, Na+/K+ transporting, alpha 3 polypeptide	ENSMUST00000080882.11|Atp1a3|ENSMUSG00000040907.16|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm39_v1_chr17_+_73225292_73225311	6.63834	Sox2	ENSMUST00000024857.14|Lbh|ENSMUSG00000024063.14|limb-bud and heart
mm39_v1_chrX_+_9138995_9139093	6.63205	Sox2	ENSMUST00000015486.7|Xk|ENSMUSG00000015342.7|X-linked Kx blood group
mm39_v1_chr15_+_88635852_88635863	6.62551	Sox2	ENSMUST00000041297.15|Zbed4|ENSMUSG00000034333.16|zinc finger, BED type containing 4
mm39_v1_chr2_+_13578738_13578840	6.60245	Sox2	ENSMUST00000141365.3|Vim|ENSMUSG00000026728.10|vimentin	ENSMUST00000028062.8|Vim|ENSMUSG00000026728.10|vimentin
mm39_v1_chr4_-_63321591_63321613	6.58403	Sox2	ENSMUST00000035724.5|Akna|ENSMUSG00000039158.12|AT-hook transcription factor
mm39_v1_chr7_-_78798790_78798810	6.54564	Sox2	ENSMUST00000107409.5|Mfge8|ENSMUSG00000030605.16|milk fat globule EGF and factor V/VIII domain containing	ENSMUST00000032825.14|Mfge8|ENSMUSG00000030605.16|milk fat globule EGF and factor V/VIII domain containing
mm39_v1_chr14_-_71004019_71004088	6.53681	Sox2	ENSMUST00000167242.8|Xpo7|ENSMUSG00000022100.15|exportin 7
mm39_v1_chr11_+_69737200_69737212	6.52672	Sox2	ENSMUST00000108632.8|Plscr3|ENSMUSG00000019461.13|phospholipid scramblase 3
mm39_v1_chr18_+_82493237_82493281	6.49561	Sox2	ENSMUST00000091789.11|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000114676.8|Mbp|ENSMUSG00000041607.18|myelin basic protein
mm39_v1_chr15_-_96540760_96540865	6.49286	Sox2	ENSMUST00000088452.11|Slc38a1|ENSMUSG00000023169.16|solute carrier family 38, member 1
mm39_v1_chr12_-_112792971_112793047	6.49198	Sox2	ENSMUST00000062092.7|Cdca4|ENSMUSG00000047832.10|cell division cycle associated 4	ENSMUST00000220899.2|Cdca4|ENSMUSG00000047832.10|cell division cycle associated 4
mm39_v1_chr8_-_4309257_4309284	6.48821	Sox2	ENSMUST00000053252.9|Ctxn1|ENSMUSG00000048644.9|cortexin 1
mm39_v1_chr9_+_98305014_98305014	6.47479	Sox2	ENSMUST00000052068.11|Rbp1|ENSMUSG00000046402.11|retinol binding protein 1, cellular
mm39_v1_chr1_-_79838897_79839020	6.38124	Sox2	ENSMUST00000190724.2|Serpine2|ENSMUSG00000026249.11|serine (or cysteine) peptidase inhibitor, clade E, member 2
mm39_v1_chr1_+_82817170_82817239	6.33078	Sox2	ENSMUST00000189220.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000113444.8|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr9_+_95519654_95519685	6.30159	Sox2	ENSMUST00000015498.9|Pcolce2|ENSMUSG00000015354.9|procollagen C-endopeptidase enhancer 2
mm39_v1_chr11_-_20282684_20282770	6.2684	Sox2	ENSMUST00000004634.7|Slc1a4|ENSMUSG00000020142.13|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	ENSMUST00000109594.8|Slc1a4|ENSMUSG00000020142.13|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
mm39_v1_chr4_+_109272828_109272846	6.22763	Sox2	ENSMUST00000106618.8|Ttc39a|ENSMUSG00000028555.16|tetratricopeptide repeat domain 39A
mm39_v1_chr1_+_135945798_135945809	6.21592	Sox2	ENSMUST00000117950.2|Tmem9|ENSMUSG00000026411.18|transmembrane protein 9
mm39_v1_chr3_+_90383425_90383531	6.20164	Sox2	ENSMUST00000001042.10|Ilf2|ENSMUSG00000001016.13|interleukin enhancer binding factor 2
mm39_v1_chr19_-_7218363_7218437	6.19998	Sox2	ENSMUST00000236769.2|Naa40|ENSMUSG00000024764.11|N(alpha)-acetyltransferase 40, NatD catalytic subunit
mm39_v1_chr7_-_12743720_12743783	6.18969	Sox2	ENSMUST00000210282.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000172240.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000051390.9|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000209997.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45
mm39_v1_chr6_-_67014348_67014376	6.147	Sox2	ENSMUST00000204369.2|Gadd45a|ENSMUSG00000036390.9|growth arrest and DNA-damage-inducible 45 alpha
mm39_v1_chr5_-_138169476_138169508	6.10879	Sox2	ENSMUST00000147920.2|Mcm7|ENSMUSG00000029730.17|minichromosome maintenance complex component 7
mm39_v1_chr6_-_87312743_87312748	6.02731	Sox2	ENSMUST00000042025.12|Antxr1|ENSMUSG00000033420.13|anthrax toxin receptor 1	ENSMUST00000205033.2|Antxr1|ENSMUSG00000033420.13|anthrax toxin receptor 1
mm39_v1_chr2_-_164197987_164197987	5.95906	Sox2	ENSMUST00000165980.2|Slpi|ENSMUSG00000017002.15|secretory leukocyte peptidase inhibitor
mm39_v1_chr19_-_7218512_7218566	5.94414	Sox2	ENSMUST00000025675.11|Naa40|ENSMUSG00000024764.11|N(alpha)-acetyltransferase 40, NatD catalytic subunit
mm39_v1_chr7_+_65759198_65759263	5.93798	Sox2	ENSMUST00000036372.8|Chsy1|ENSMUSG00000032640.11|chondroitin sulfate synthase 1
mm39_v1_chr6_+_71684846_71684862	5.88789	Sox2	ENSMUST00000212792.2|Reep1|ENSMUSG00000052852.9|receptor accessory protein 1
mm39_v1_chr11_-_60804601_60804642	5.86735	Sox2	ENSMUST00000019075.4|Natd1|ENSMUSG00000018931.4|N-acetyltransferase domain containing 1
mm39_v1_chr4_-_137157824_137157851	5.84656	Sox2	ENSMUST00000102522.5|Cela3b|ENSMUSG00000023433.9|chymotrypsin-like elastase family, member 3B
mm39_v1_chr8_+_95703506_95703621	5.81437	Sox2	ENSMUST00000212581.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr1_+_74448535_74448558	5.76648	Sox2	ENSMUST00000027366.13|Vil1|ENSMUSG00000026175.13|villin 1
mm39_v1_chr5_-_18040713_18040739	5.71609	Sox2	ENSMUST00000197890.5|Cd36|ENSMUSG00000002944.16|CD36 molecule
mm39_v1_chr3_+_5815863_5815866	5.71567	Sox2	ENSMUST00000192045.2|Gm8797|ENSMUSG00000103034.2|predicted pseudogene 8797
mm39_v1_chr8_+_11362805_11362867	5.71521	Sox2	ENSMUST00000033899.14|Col4a2|ENSMUSG00000031503.14|collagen, type IV, alpha 2
mm39_v1_chr16_+_37597235_37597235	5.70236	Sox2	ENSMUST00000114763.3|Fstl1|ENSMUSG00000022816.12|follistatin-like 1
mm39_v1_chr13_+_51799268_51799342	5.69043	Sox2	ENSMUST00000075853.6|Cks2|ENSMUSG00000062248.6|CDC28 protein kinase regulatory subunit 2
mm39_v1_chr10_+_61311561_61311614	5.67158	Sox2	ENSMUST00000049242.9|Lrrc20|ENSMUSG00000037151.9|leucine rich repeat containing 20
mm39_v1_chr15_-_98851566_98851584	5.66746	Sox2	ENSMUST00000097014.7|Tuba1a|ENSMUSG00000072235.7|tubulin, alpha 1A
mm39_v1_chr10_+_7543260_7543322	5.66245	Sox2	ENSMUST00000040135.9|Nup43|ENSMUSG00000040034.16|nucleoporin 43
mm39_v1_chr8_+_36561982_36562027	5.66023	Sox2	ENSMUST00000110492.2|Prag1|ENSMUSG00000050271.13|PEAK1 related kinase activating pseudokinase 1
mm39_v1_chr17_+_35278011_35278113	5.64824	Sox2	ENSMUST00000007255.13|Ddah2|ENSMUSG00000007039.13|dimethylarginine dimethylaminohydrolase 2	ENSMUST00000174493.8|Ddah2|ENSMUSG00000007039.13|dimethylarginine dimethylaminohydrolase 2
mm39_v1_chr9_+_96141317_96141338	5.63157	Sox2	ENSMUST00000165768.4|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr2_+_31840151_31840293	5.62831	Sox2	ENSMUST00000001920.13|Aif1l|ENSMUSG00000001864.14|allograft inflammatory factor 1-like	ENSMUST00000151276.3|Aif1l|ENSMUSG00000001864.14|allograft inflammatory factor 1-like
mm39_v1_chr10_-_121883196_121883227	5.61859	Sox2	ENSMUST00000020322.12|Srgap1|ENSMUSG00000020121.16|SLIT-ROBO Rho GTPase activating protein 1	ENSMUST00000081688.13|Srgap1|ENSMUSG00000020121.16|SLIT-ROBO Rho GTPase activating protein 1
mm39_v1_chr11_+_101207743_101207803	5.59452	Sox2	ENSMUST00000151385.2|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm39_v1_chr12_-_110945415_110945474	5.57121	Sox2	ENSMUST00000135131.2|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9	ENSMUST00000043459.13|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9	ENSMUST00000128353.8|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr1_-_153363354_153363411	5.55475	Sox2	ENSMUST00000186380.7|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9	ENSMUST00000188345.2|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9	ENSMUST00000042141.12|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm39_v1_chr5_-_33432310_33432356	5.5319	Sox2	ENSMUST00000201372.3|Ctbp1|ENSMUSG00000037373.13|C-terminal binding protein 1	ENSMUST00000202962.4|Ctbp1|ENSMUSG00000037373.13|C-terminal binding protein 1	ENSMUST00000201575.4|Ctbp1|ENSMUSG00000037373.13|C-terminal binding protein 1	ENSMUST00000202868.4|Ctbp1|ENSMUSG00000037373.13|C-terminal binding protein 1	ENSMUST00000079746.10|Ctbp1|ENSMUSG00000037373.13|C-terminal binding protein 1
mm39_v1_chr9_+_96141299_96141314	5.51198	Sox2	ENSMUST00000179065.8|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr8_+_110432132_110432181	5.50377	Sox2	ENSMUST00000212964.2|Zfp821|ENSMUSG00000031728.11|zinc finger protein 821	ENSMUST00000034163.9|Zfp821|ENSMUSG00000031728.11|zinc finger protein 821
mm39_v1_chr4_+_134195631_134195720	5.48151	Sox2	ENSMUST00000030636.11|Stmn1|ENSMUSG00000028832.12|stathmin 1	ENSMUST00000127279.8|Stmn1|ENSMUSG00000028832.12|stathmin 1	ENSMUST00000105867.8|Stmn1|ENSMUSG00000028832.12|stathmin 1
mm39_v1_chr1_-_180641159_180641197	5.45719	Sox2	ENSMUST00000162118.8|H3f3a|ENSMUSG00000060743.13|H3.3 histone A	ENSMUST00000159685.2|H3f3a|ENSMUSG00000060743.13|H3.3 histone A	ENSMUST00000161308.8|H3f3a|ENSMUSG00000060743.13|H3.3 histone A
mm39_v1_chrX_+_92718695_92718767	5.42443	Sox2	ENSMUST00000045898.4|Pcyt1b|ENSMUSG00000035246.17|phosphate cytidylyltransferase 1, choline, beta isoform
mm39_v1_chr15_-_79326001_79326062	5.4182	Sox2	ENSMUST00000122044.8|Csnk1e|ENSMUSG00000022433.22|casein kinase 1, epsilon	ENSMUST00000135519.2|Csnk1e|ENSMUSG00000022433.22|casein kinase 1, epsilon
mm39_v1_chr13_+_21365308_21365338	5.40787	Sox2	ENSMUST00000221464.2|Trim27|ENSMUSG00000021326.14|tripartite motif-containing 27
mm39_v1_chr5_-_18040647_18040709	5.40643	Sox2	ENSMUST00000082367.13|Cd36|ENSMUSG00000002944.16|CD36 molecule
mm39_v1_chr6_+_70703409_70703456	5.34283	Sox2	ENSMUST00000103410.3|Igkc|ENSMUSG00000076609.3|immunoglobulin kappa constant
mm39_v1_chr2_-_164876690_164876787	5.31996	Sox2	ENSMUST00000122070.2|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5	ENSMUST00000121377.8|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5	ENSMUST00000153905.2|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5	ENSMUST00000040381.15|Ncoa5|ENSMUSG00000039804.16|nuclear receptor coactivator 5
mm39_v1_chr10_-_30647836_30647847	5.31218	Sox2	ENSMUST00000215926.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7	ENSMUST00000213836.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr1_+_82817794_82817893	5.23092	Sox2	ENSMUST00000186043.2|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr6_+_65019574_65019651	5.1988	Sox2	ENSMUST00000031984.9|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	ENSMUST00000205118.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr1_+_87332638_87332686	5.19272	Sox2	ENSMUST00000173152.2|Gigyf2|ENSMUSG00000048000.16|GRB10 interacting GYF protein 2	ENSMUST00000173663.2|Gigyf2|ENSMUSG00000048000.16|GRB10 interacting GYF protein 2
mm39_v1_chr8_-_86091946_86091963	5.1919	Sox2	ENSMUST00000034133.14|Mylk3|ENSMUSG00000031698.15|myosin light chain kinase 3
mm39_v1_chr12_+_85043083_85043193	5.18414	Sox2	ENSMUST00000168977.8|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1	ENSMUST00000021670.15|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1
mm39_v1_chr1_-_180641430_180641508	5.18303	Sox2	ENSMUST00000162814.8|H3f3a|ENSMUSG00000060743.13|H3.3 histone A
mm39_v1_chr2_+_32766126_32766253	5.1763	Sox2	ENSMUST00000028135.15|Niban2|ENSMUSG00000026796.17|niban apoptosis regulator 2
mm39_v1_chrX_+_133486391_133486447	5.16789	Sox2	ENSMUST00000113211.8|Rpl36a|ENSMUSG00000079435.10|ribosomal protein L36A
mm39_v1_chr8_+_11778039_11778105	5.15508	Sox2	ENSMUST00000110909.9|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)
mm39_v1_chr6_+_41331039_41331119	5.13839	Sox2	ENSMUST00000072103.7|Try10|ENSMUSG00000071521.5|trypsin 10
mm39_v1_chr8_-_120567236_120567288	5.13594	Sox2	ENSMUST00000211873.2|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)	ENSMUST00000168698.2|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)	ENSMUST00000034285.14|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)
mm39_v1_chrX_-_56438380_56438400	5.12807	Sox2	ENSMUST00000143310.2|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000098470.9|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000114726.8|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome
mm39_v1_chr6_-_36787096_36787155	5.1271	Sox2	ENSMUST00000201321.2|Ptn|ENSMUSG00000029838.12|pleiotrophin	ENSMUST00000101534.5|Ptn|ENSMUSG00000029838.12|pleiotrophin
mm39_v1_chr17_+_48539782_48539805	5.09459	Sox2	ENSMUST00000113251.10|Trem1|ENSMUSG00000042265.14|triggering receptor expressed on myeloid cells 1	ENSMUST00000048782.7|Trem1|ENSMUSG00000042265.14|triggering receptor expressed on myeloid cells 1
mm39_v1_chr1_-_180641099_180641148	5.09343	Sox2	ENSMUST00000159789.2|H3f3a|ENSMUSG00000060743.13|H3.3 histone A	ENSMUST00000081026.11|H3f3a|ENSMUSG00000060743.13|H3.3 histone A
mm39_v1_chr11_+_60590498_60590575	5.08793	Sox2	ENSMUST00000052346.10|Llgl1|ENSMUSG00000020536.13|LLGL1 scribble cell polarity complex component
mm39_v1_chr15_-_84441977_84442075	5.06056	Sox2	ENSMUST00000069476.5|Rtl6|ENSMUSG00000055745.5|retrotransposon Gag like 6
mm39_v1_chr14_+_54669054_54669131	5.05161	Sox2	ENSMUST00000089688.6|Mmp14|ENSMUSG00000000957.12|matrix metallopeptidase 14 (membrane-inserted)	ENSMUST00000225641.2|Mmp14|ENSMUSG00000000957.12|matrix metallopeptidase 14 (membrane-inserted)
mm39_v1_chrX_+_133195974_133195974	5.04542	Sox2	ENSMUST00000037687.8|Tmem35a|ENSMUSG00000033578.8|transmembrane protein 35A
mm39_v1_chr11_-_70111796_70111890	5.0392	Sox2	ENSMUST00000060010.3|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13	ENSMUST00000190533.2|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm39_v1_chr15_+_76131020_76131031	5.03529	Sox2	ENSMUST00000229380.2|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
mm39_v1_chr19_+_7394951_7395015	5.0299	Sox2	ENSMUST00000159348.3|2700081O15Rik|ENSMUSG00000053080.11|RIKEN cDNA 2700081O15 gene
mm39_v1_chr11_+_45946800_45946895	5.0295	Sox2	ENSMUST00000011400.8|Adam19|ENSMUSG00000011256.17|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm39_v1_chr19_-_40576817_40576870	4.90814	Sox2	ENSMUST00000175932.2|Aldh18a1|ENSMUSG00000025007.14|aldehyde dehydrogenase 18 family, member A1	ENSMUST00000176955.8|Aldh18a1|ENSMUSG00000025007.14|aldehyde dehydrogenase 18 family, member A1	ENSMUST00000149476.3|Aldh18a1|ENSMUSG00000025007.14|aldehyde dehydrogenase 18 family, member A1
mm39_v1_chr8_-_86091970_86091982	4.90467	Sox2	ENSMUST00000121972.8|Mylk3|ENSMUSG00000031698.15|myosin light chain kinase 3
mm39_v1_chr15_+_85090150_85090273	4.90031	Sox2	ENSMUST00000057410.14|Fbln1|ENSMUSG00000006369.15|fibulin 1	ENSMUST00000109432.4|Fbln1|ENSMUSG00000006369.15|fibulin 1
mm39_v1_chr17_+_35219941_35219963	4.89874	Sox2	ENSMUST00000087315.14|Vars|ENSMUSG00000007029.17|valyl-tRNA synthetase
mm39_v1_chr5_+_66833434_66833600	4.89046	Sox2	ENSMUST00000031131.11|Uchl1|ENSMUSG00000029223.13|ubiquitin carboxy-terminal hydrolase L1
mm39_v1_chr8_+_124059414_124059480	4.87491	Sox2	ENSMUST00000010298.7|Spire2|ENSMUSG00000010154.8|spire type actin nucleation factor 2
mm39_v1_chr7_-_112946481_112946501	4.86501	Sox2	ENSMUST00000117577.8|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10
mm39_v1_chr6_-_67014191_67014235	4.82018	Sox2	ENSMUST00000204282.2|Gadd45a|ENSMUSG00000036390.9|growth arrest and DNA-damage-inducible 45 alpha
mm39_v1_chr14_-_30741012_30741109	4.8111	Sox2	ENSMUST00000037739.8|Gnl3|ENSMUSG00000042354.8|guanine nucleotide binding protein-like 3 (nucleolar)
mm39_v1_chr5_-_73413888_73413979	4.79915	Sox2	ENSMUST00000101127.12|Fryl|ENSMUSG00000070733.14|FRY like transcription coactivator
mm39_v1_chr17_+_35219998_35220073	4.70783	Sox2	ENSMUST00000173584.8|Vars|ENSMUSG00000007029.17|valyl-tRNA synthetase
mm39_v1_chr4_-_136329953_136330071	4.7056	Sox2	ENSMUST00000105847.8|Kdm1a|ENSMUSG00000036940.16|lysine (K)-specific demethylase 1A	ENSMUST00000116273.9|Kdm1a|ENSMUSG00000036940.16|lysine (K)-specific demethylase 1A
mm39_v1_chr11_+_70323452_70323533	4.68878	Sox2	ENSMUST00000084954.13|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000108568.10|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000079056.9|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102564.11|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000124943.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000150076.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102563.2|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2
mm39_v1_chr17_+_35220252_35220324	4.68013	Sox2	ENSMUST00000174260.8|Vars|ENSMUSG00000007029.17|valyl-tRNA synthetase
mm39_v1_chr5_-_148989821_148989863	4.67405	Sox2	ENSMUST00000139443.8|Hmgb1|ENSMUSG00000066551.13|high mobility group box 1	ENSMUST00000085546.13|Hmgb1|ENSMUSG00000066551.13|high mobility group box 1
mm39_v1_chr11_+_67167950_67168009	4.67243	Sox2	ENSMUST00000019625.12|Myh8|ENSMUSG00000055775.17|myosin, heavy polypeptide 8, skeletal muscle, perinatal
mm39_v1_chr17_-_25492508_25492531	4.6712	Sox2	ENSMUST00000174031.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr11_-_76359222_76359313	4.66661	Sox2	ENSMUST00000065028.14|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr6_+_29735666_29735693	4.65977	Sox2	ENSMUST00000001812.5|Smo|ENSMUSG00000001761.8|smoothened, frizzled class receptor
mm39_v1_chrX_+_157993303_157993360	4.65917	Sox2	ENSMUST00000112493.8|Rps6ka3|ENSMUSG00000031309.16|ribosomal protein S6 kinase polypeptide 3
mm39_v1_chr9_-_57673128_57673191	4.64707	Sox2	ENSMUST00000065330.8|Clk3|ENSMUSG00000032316.9|CDC-like kinase 3
mm39_v1_chr18_+_82572595_82572705	4.63991	Sox2	ENSMUST00000152071.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000142850.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000080658.12|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000133193.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000123251.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000153478.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000075372.13|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000102812.12|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000062446.15|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000114674.11|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000132369.3|Mbp|ENSMUSG00000041607.18|myelin basic protein
mm39_v1_chr1_+_86454511_86454529	4.58905	Sox2	ENSMUST00000188533.2|Ptma|ENSMUSG00000026238.15|prothymosin alpha
mm39_v1_chr2_+_3115250_3115267	4.54725	Sox2	ENSMUST00000072955.12|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr7_+_126832215_126832248	4.52965	Sox2	ENSMUST00000106312.4|Zfp553|ENSMUSG00000045598.11|zinc finger protein 553
mm39_v1_chr17_-_25492340_25492358	4.507	Sox2	ENSMUST00000173084.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr11_-_120472022_120472206	4.49324	Sox2	ENSMUST00000067936.6|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr12_-_100995305_100995346	4.48887	Sox2	ENSMUST00000068411.5|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chr6_-_51443602_51443681	4.48079	Sox2	ENSMUST00000203253.2|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1
mm39_v1_chr7_-_105436775_105436861	4.45168	Sox2	ENSMUST00000078482.13|Dchs1|ENSMUSG00000036862.16|dachsous cadherin related 1
mm39_v1_chr8_-_78451055_78451113	4.44307	Sox2	ENSMUST00000034029.8|Ednra|ENSMUSG00000031616.8|endothelin receptor type A
mm39_v1_chr9_-_66032134_66032168	4.44139	Sox2	ENSMUST00000034946.15|Snx1|ENSMUSG00000032382.15|sorting nexin 1
mm39_v1_chr2_-_126517458_126517512	4.40997	Sox2	ENSMUST00000103227.8|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1	ENSMUST00000110425.9|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1	ENSMUST00000089745.11|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1
mm39_v1_chr1_+_39940043_39940123	4.40553	Sox2	ENSMUST00000168431.7|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000163854.9|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4
mm39_v1_chr1_-_55066629_55066645	4.39615	Sox2	ENSMUST00000027127.14|Sf3b1|ENSMUSG00000025982.14|splicing factor 3b, subunit 1
mm39_v1_chr3_+_37694094_37694229	4.39345	Sox2	ENSMUST00000108109.8|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1	ENSMUST00000038569.8|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1	ENSMUST00000108107.2|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1
mm39_v1_chr18_+_42644552_42644586	4.38117	Sox2	ENSMUST00000237602.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000236088.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000025375.15|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr13_-_58549728_58549873	4.38039	Sox2	ENSMUST00000225176.2|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K	ENSMUST00000223822.2|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K
mm39_v1_chr16_-_20245071_20245136	4.3644	Sox2	ENSMUST00000115547.9|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	ENSMUST00000096199.5|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm39_v1_chr7_+_28140450_28140489	4.35959	Sox2	ENSMUST00000135686.2|Gmfg|ENSMUSG00000060791.16|glia maturation factor, gamma
mm39_v1_chr4_+_117706559_117706572	4.34201	Sox2	ENSMUST00000163288.2|Slc6a9|ENSMUSG00000028542.18|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm39_v1_chr16_-_18448454_18448556	4.31655	Sox2	ENSMUST00000231622.2|Septin5|ENSMUSG00000072214.8|septin 5
mm39_v1_chr13_-_61084358_61084439	4.3132	Sox2	ENSMUST00000225859.2|Gm49391|ENSMUSG00000114432.2|predicted gene, 49391	ENSMUST00000225167.2|Gm49391|ENSMUSG00000114432.2|predicted gene, 49391	ENSMUST00000021880.10|Ctla2a|ENSMUSG00000044258.11|cytotoxic T lymphocyte-associated protein 2 alpha
mm39_v1_chr12_+_69343450_69343574	4.30193	Sox2	ENSMUST00000021362.5|Klhdc2|ENSMUSG00000020978.11|kelch domain containing 2
mm39_v1_chr11_+_32483290_32483338	4.27229	Sox2	ENSMUST00000102821.4|Stk10|ENSMUSG00000020272.9|serine/threonine kinase 10
mm39_v1_chr11_-_74480870_74481012	4.26754	Sox2	ENSMUST00000145524.2|Rap1gap2|ENSMUSG00000038807.20|RAP1 GTPase activating protein 2	ENSMUST00000102521.9|Rap1gap2|ENSMUSG00000038807.20|RAP1 GTPase activating protein 2
mm39_v1_chr2_-_126517383_126517429	4.24965	Sox2	ENSMUST00000103226.10|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1	ENSMUST00000110424.9|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1
mm39_v1_chr7_-_110681402_110681438	4.24036	Sox2	ENSMUST00000159305.2|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2
mm39_v1_chrX_+_100473161_100473315	4.23708	Sox2	ENSMUST00000033673.7|Nono|ENSMUSG00000031311.18|non-POU-domain-containing, octamer binding protein
mm39_v1_chr19_+_10611574_10611609	4.20489	Sox2	ENSMUST00000055115.9|Vwce|ENSMUSG00000043789.9|von Willebrand factor C and EGF domains
mm39_v1_chr12_+_110567873_110567886	4.20329	Sox2	ENSMUST00000018851.14|Dync1h1|ENSMUSG00000018707.14|dynein cytoplasmic 1 heavy chain 1
mm39_v1_chr5_-_134581235_134581331	4.18722	Sox2	ENSMUST00000036999.10|Clip2|ENSMUSG00000063146.12|CAP-GLY domain containing linker protein 2	ENSMUST00000100647.7|Clip2|ENSMUSG00000063146.12|CAP-GLY domain containing linker protein 2
mm39_v1_chr10_+_79832313_79832339	4.17756	Sox2	ENSMUST00000132517.8|Abca7|ENSMUSG00000035722.16|ATP-binding cassette, sub-family A (ABC1), member 7
mm39_v1_chr10_+_119655294_119655430	4.16735	Sox2	ENSMUST00000105262.9|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000147454.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000138410.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000144825.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000148954.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000144959.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1
mm39_v1_chr1_+_9868332_9868451	4.15293	Sox2	ENSMUST00000166384.8|Sgk3|ENSMUSG00000025915.15|serum/glucocorticoid regulated kinase 3	ENSMUST00000168907.8|Sgk3|ENSMUSG00000025915.15|serum/glucocorticoid regulated kinase 3
mm39_v1_chr6_+_40941688_40941715	4.15182	Sox2	ENSMUST00000076638.7|1810009J06Rik|ENSMUSG00000094808.3|RIKEN cDNA 1810009J06 gene
mm39_v1_chr5_+_21748523_21748587	4.15047	Sox2	ENSMUST00000035651.6|Lrrc17|ENSMUSG00000039883.6|leucine rich repeat containing 17
mm39_v1_chr7_-_143102792_143102862	4.12922	Sox2	ENSMUST00000072727.7|Nap1l4|ENSMUSG00000059119.10|nucleosome assembly protein 1-like 4	ENSMUST00000207948.2|Nap1l4|ENSMUSG00000059119.10|nucleosome assembly protein 1-like 4	ENSMUST00000208190.2|Nap1l4|ENSMUSG00000059119.10|nucleosome assembly protein 1-like 4
mm39_v1_chr11_-_51497665_51497684	4.12685	Sox2	ENSMUST00000074669.10|Hnrnpab|ENSMUSG00000020358.18|heterogeneous nuclear ribonucleoprotein A/B	ENSMUST00000101249.9|Hnrnpab|ENSMUSG00000020358.18|heterogeneous nuclear ribonucleoprotein A/B	ENSMUST00000109103.4|Hnrnpab|ENSMUSG00000020358.18|heterogeneous nuclear ribonucleoprotein A/B
mm39_v1_chr10_-_117681864_117681940	4.12612	Sox2	ENSMUST00000064667.9|Rap1b|ENSMUSG00000052681.9|RAS related protein 1b
mm39_v1_chr3_+_88528743_88528862	4.12561	Sox2	ENSMUST00000170653.9|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2	ENSMUST00000177303.8|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2
mm39_v1_chr11_+_121128042_121128116	4.10004	Sox2	ENSMUST00000103015.4|Narf|ENSMUSG00000000056.8|nuclear prelamin A recognition factor
mm39_v1_chr11_+_60590584_60590671	4.08057	Sox2	ENSMUST00000108719.4|Llgl1|ENSMUSG00000020536.13|LLGL1 scribble cell polarity complex component
mm39_v1_chr7_-_121620366_121620445	4.07758	Sox2	ENSMUST00000033160.15|Gga2|ENSMUSG00000030872.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm39_v1_chr3_-_100876960_100876992	4.07314	Sox2	ENSMUST00000076941.12|Ttf2|ENSMUSG00000033222.17|transcription termination factor, RNA polymerase II
mm39_v1_chr9_-_14956704_14956798	4.06391	Sox2	ENSMUST00000164273.9|Panx1|ENSMUSG00000031934.15|pannexin 1
mm39_v1_chr2_+_153491363_153491380	4.04046	Sox2	ENSMUST00000072997.10|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000109773.8|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000109774.9|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000081628.13|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000103151.8|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000056495.14|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000088976.12|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000109772.8|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B	ENSMUST00000103150.10|Dnmt3b|ENSMUSG00000027478.16|DNA methyltransferase 3B
mm39_v1_chr6_-_72765935_72766044	4.01715	Sox2	ENSMUST00000114053.9|Tcf7l1|ENSMUSG00000055799.14|transcription factor 7 like 1 (T cell specific, HMG box)
mm39_v1_chr8_-_11685726_11685769	4.00611	Sox2	ENSMUST00000033905.13|Ankrd10|ENSMUSG00000031508.15|ankyrin repeat domain 10	ENSMUST00000169782.3|Ankrd10|ENSMUSG00000031508.15|ankyrin repeat domain 10
mm39_v1_chr4_+_34550918_34550945	3.99139	Sox2	ENSMUST00000084299.6|Akirin2|ENSMUSG00000028291.8|akirin 2
mm39_v1_chr5_+_105563605_105563651	3.9836	Sox2	ENSMUST00000112707.3|Lrrc8b|ENSMUSG00000070639.6|leucine rich repeat containing 8 family, member B
mm39_v1_chr8_-_87472562_87472682	3.97833	Sox2	ENSMUST00000045296.6|Siah1a|ENSMUSG00000036840.6|siah E3 ubiquitin protein ligase 1A
mm39_v1_chr8_+_22996233_22996247	3.96481	Sox2	ENSMUST00000210854.2|Slc20a2|ENSMUSG00000037656.10|solute carrier family 20, member 2
mm39_v1_chr4_+_132366298_132366430	3.95859	Sox2	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr2_-_168609110_168609126	3.95835	Sox2	ENSMUST00000029061.12|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4	ENSMUST00000103074.2|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr11_-_120472379_120472452	3.9309	Sox2	ENSMUST00000106197.10|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr11_+_3239165_3239281	3.92787	Sox2	ENSMUST00000134089.8|Patz1|ENSMUSG00000020453.18|POZ (BTB) and AT hook containing zinc finger 1
mm39_v1_chr8_+_34222058_34222167	3.92585	Sox2	ENSMUST00000167264.8|Gtf2e2|ENSMUSG00000031585.14|general transcription factor II E, polypeptide 2 (beta subunit)	ENSMUST00000187392.7|Gtf2e2|ENSMUSG00000031585.14|general transcription factor II E, polypeptide 2 (beta subunit)
mm39_v1_chr9_-_57672375_57672432	3.91977	Sox2	ENSMUST00000215233.2|Clk3|ENSMUSG00000032316.9|CDC-like kinase 3
mm39_v1_chr2_-_155953874_155953898	3.91894	Sox2	ENSMUST00000059647.12|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000109604.9|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000142960.9|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000138068.2|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000136296.9|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000128499.2|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12
mm39_v1_chr12_+_112978051_112978160	3.90949	Sox2	ENSMUST00000223502.2|Pacs2|ENSMUSG00000021143.11|phosphofurin acidic cluster sorting protein 2	ENSMUST00000084891.5|Pacs2|ENSMUSG00000021143.11|phosphofurin acidic cluster sorting protein 2	ENSMUST00000220541.2|Pacs2|ENSMUSG00000021143.11|phosphofurin acidic cluster sorting protein 2
mm39_v1_chrX_+_161684221_161684258	3.90589	Sox2	ENSMUST00000101095.9|Ctps2|ENSMUSG00000031360.15|cytidine 5'-triphosphate synthase 2
mm39_v1_chr19_+_6414587_6414699	3.90175	Sox2	ENSMUST00000155973.2|Sf1|ENSMUSG00000024949.18|splicing factor 1
mm39_v1_chr2_-_151815307_151815319	3.89866	Sox2	ENSMUST00000109863.2|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A
mm39_v1_chr14_-_55019387_55019411	3.89561	Sox2	ENSMUST00000022787.8|Slc7a8|ENSMUSG00000022180.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm39_v1_chr6_-_136758716_136758804	3.88874	Sox2	ENSMUST00000078095.11|Gucy2c|ENSMUSG00000042638.15|guanylate cyclase 2c	ENSMUST00000032338.10|Gucy2c|ENSMUSG00000042638.15|guanylate cyclase 2c
mm39_v1_chr1_-_36596598_36596642	3.88366	Sox2	ENSMUST00000191642.6|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C	ENSMUST00000193382.6|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C	ENSMUST00000195620.6|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm39_v1_chr6_-_49240944_49240992	3.88033	Sox2	ENSMUST00000204189.3|Tra2a|ENSMUSG00000029817.12|transformer 2 alpha	ENSMUST00000031841.9|Tra2a|ENSMUSG00000029817.12|transformer 2 alpha
mm39_v1_chr2_+_32041083_32041274	3.87524	Sox2	ENSMUST00000036691.14|Prrc2b|ENSMUSG00000039262.17|proline-rich coiled-coil 2B	ENSMUST00000069817.15|Prrc2b|ENSMUSG00000039262.17|proline-rich coiled-coil 2B
mm39_v1_chr9_+_21527462_21527473	3.87408	Sox2	ENSMUST00000034707.15|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	ENSMUST00000098948.10|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm39_v1_chr11_-_106606076_106606220	3.86276	Sox2	ENSMUST00000080853.11|Pecam1|ENSMUSG00000020717.20|platelet/endothelial cell adhesion molecule 1	ENSMUST00000183610.8|Pecam1|ENSMUSG00000020717.20|platelet/endothelial cell adhesion molecule 1	ENSMUST00000103069.10|Pecam1|ENSMUSG00000020717.20|platelet/endothelial cell adhesion molecule 1	ENSMUST00000106796.9|Pecam1|ENSMUSG00000020717.20|platelet/endothelial cell adhesion molecule 1
mm39_v1_chr4_-_116263183_116263435	3.85003	Sox2	ENSMUST00000123072.8|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2	ENSMUST00000144281.2|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2
mm39_v1_chr18_+_82932747_82932788	3.84282	Sox2	ENSMUST00000071233.7|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chr9_-_78388080_78388123	3.80715	Sox2	ENSMUST00000156988.2|Eef1a1|ENSMUSG00000037742.15|eukaryotic translation elongation factor 1 alpha 1
mm39_v1_chr16_-_20245138_20245149	3.79925	Sox2	ENSMUST00000079158.13|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm39_v1_chr19_-_41836514_41836571	3.77142	Sox2	ENSMUST00000059231.4|Frat2|ENSMUSG00000047604.4|frequently rearranged in advanced T cell lymphomas 2
mm39_v1_chr7_-_128020397_128020482	3.77098	Sox2	ENSMUST00000147840.2|Rgs10|ENSMUSG00000030844.12|regulator of G-protein signalling 10
mm39_v1_chr1_+_86454431_86454459	3.76731	Sox2	ENSMUST00000045897.15|Ptma|ENSMUSG00000026238.15|prothymosin alpha	ENSMUST00000186255.7|Ptma|ENSMUSG00000026238.15|prothymosin alpha	ENSMUST00000188699.7|Ptma|ENSMUSG00000026238.15|prothymosin alpha
mm39_v1_chr2_+_90575714_90575813	3.75479	Sox2	ENSMUST00000238890.2|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4	ENSMUST00000013759.6|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4
mm39_v1_chr9_+_21527526_21527578	3.74696	Sox2	ENSMUST00000174008.8|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm39_v1_chr18_+_11766333_11766414	3.74656	Sox2	ENSMUST00000115861.9|Rbbp8|ENSMUSG00000041238.17|retinoblastoma binding protein 8, endonuclease
mm39_v1_chr8_+_34221861_34221976	3.73627	Sox2	ENSMUST00000170705.8|Gtf2e2|ENSMUSG00000031585.14|general transcription factor II E, polypeptide 2 (beta subunit)
mm39_v1_chr9_+_72600721_72600884	3.72152	Sox2	ENSMUST00000238315.2|Nedd4|ENSMUSG00000032216.16|neural precursor cell expressed, developmentally down-regulated 4
mm39_v1_chr7_-_28297565_28297610	3.71929	Sox2	ENSMUST00000040531.9|Samd4b|ENSMUSG00000109336.2|sterile alpha motif domain containing 4B	ENSMUST00000108283.8|Pak4|ENSMUSG00000030602.14|p21 (RAC1) activated kinase 4
mm39_v1_chr7_-_115445315_115445347	3.70616	Sox2	ENSMUST00000166207.3|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr11_+_3933699_3933737	3.69525	Sox2	ENSMUST00000063004.14|Gal3st1|ENSMUSG00000049721.15|galactose-3-O-sulfotransferase 1
mm39_v1_chr17_+_35460722_35460846	3.68112	Sox2	ENSMUST00000068056.12|Ddx39b|ENSMUSG00000019432.16|DEAD box helicase 39b	ENSMUST00000174757.8|Ddx39b|ENSMUSG00000019432.16|DEAD box helicase 39b	ENSMUST00000173731.8|Ddx39b|ENSMUSG00000019432.16|DEAD box helicase 39b
mm39_v1_chr13_-_13568106_13568209	3.67823	Sox2	ENSMUST00000021738.10|Gpr137b|ENSMUSG00000021306.12|G protein-coupled receptor 137B	ENSMUST00000220628.2|Gpr137b|ENSMUSG00000021306.12|G protein-coupled receptor 137B
mm39_v1_chr11_-_95200382_95200428	3.67755	Sox2	ENSMUST00000092766.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7	ENSMUST00000072621.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7
mm39_v1_chr19_-_5779648_5779717	3.67428	Sox2	ENSMUST00000116558.3|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000099955.4|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000161368.2|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B
mm39_v1_chr10_+_39245746_39245808	3.67307	Sox2	ENSMUST00000063091.13|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene	ENSMUST00000099967.10|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene	ENSMUST00000126486.8|Fyn|ENSMUSG00000019843.15|Fyn proto-oncogene
mm39_v1_chr8_+_106785434_106785472	3.63323	Sox2	ENSMUST00000212742.2|Nfatc3|ENSMUSG00000031902.11|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3	ENSMUST00000211991.2|Nfatc3|ENSMUSG00000031902.11|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm39_v1_chr10_+_53473032_53473100	3.63191	Sox2	ENSMUST00000020004.8|Asf1a|ENSMUSG00000019857.8|anti-silencing function 1A histone chaperone
mm39_v1_chr3_+_53371086_53371102	3.61154	Sox2	ENSMUST00000058577.5|Proser1|ENSMUSG00000049504.13|proline and serine rich 1
mm39_v1_chr2_+_31649946_31650001	3.60226	Sox2	ENSMUST00000028190.13|Abl1|ENSMUSG00000026842.17|c-abl oncogene 1, non-receptor tyrosine kinase
mm39_v1_chr8_+_70261323_70261392	3.60024	Sox2	ENSMUST00000036074.15|Gmip|ENSMUSG00000036246.15|Gem-interacting protein	ENSMUST00000123453.2|Gmip|ENSMUSG00000036246.15|Gem-interacting protein
mm39_v1_chr4_+_128621378_128621503	3.59876	Sox2	ENSMUST00000106079.10|Phc2|ENSMUSG00000028796.18|polyhomeotic 2	ENSMUST00000133439.8|Phc2|ENSMUSG00000028796.18|polyhomeotic 2
mm39_v1_chr12_-_15866763_15866923	3.58682	Sox2	ENSMUST00000020922.8|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2	ENSMUST00000221215.2|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2	ENSMUST00000221518.2|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2
mm39_v1_chr14_-_70449438_70449498	3.58493	Sox2	ENSMUST00000227929.2|Sorbs3|ENSMUSG00000022091.7|sorbin and SH3 domain containing 3
mm39_v1_chr17_+_57665691_57665721	3.58167	Sox2	ENSMUST00000086763.13|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000233376.2|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000233840.2|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000232808.2|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000004850.8|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1
mm39_v1_chr12_+_104067346_104067372	3.57178	Sox2	ENSMUST00000021495.4|Serpina5|ENSMUSG00000041550.5|serine (or cysteine) peptidase inhibitor, clade A, member 5
mm39_v1_chr5_-_137869969_137869999	3.56872	Sox2	ENSMUST00000196162.5|Pilrb2|ENSMUSG00000066682.12|paired immunoglobin-like type 2 receptor beta 2
mm39_v1_chr12_+_29988035_29988058	3.56011	Sox2	ENSMUST00000122328.8|Pxdn|ENSMUSG00000020674.18|peroxidasin	ENSMUST00000118321.3|Pxdn|ENSMUSG00000020674.18|peroxidasin
mm39_v1_chr3_+_32762656_32762656	3.55725	Sox2	ENSMUST00000029214.14|Actl6a|ENSMUSG00000027671.15|actin-like 6A
mm39_v1_chrX_+_154045439_154045454	3.55632	Sox2	ENSMUST00000026324.10|Acot9|ENSMUSG00000025287.16|acyl-CoA thioesterase 9
mm39_v1_chr17_-_33879224_33879268	3.55068	Sox2	ENSMUST00000130946.8|Hnrnpm|ENSMUSG00000059208.16|heterogeneous nuclear ribonucleoprotein M
mm39_v1_chrX_+_158491589_158491638	3.54506	Sox2	ENSMUST00000080394.13|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr2_-_165726610_165726794	3.539	Sox2	ENSMUST00000177633.8|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8	ENSMUST00000018050.14|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8	ENSMUST00000088113.11|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8
mm39_v1_chr5_+_129097133_129097336	3.51111	Sox2	ENSMUST00000031383.14|Ran|ENSMUSG00000029430.14|RAN, member RAS oncogene family	ENSMUST00000111343.2|Ran|ENSMUSG00000029430.14|RAN, member RAS oncogene family
mm39_v1_chr9_-_88364593_88364640	3.50446	Sox2	ENSMUST00000173801.8|Syncrip|ENSMUSG00000032423.13|synaptotagmin binding, cytoplasmic RNA interacting protein	ENSMUST00000069221.12|Syncrip|ENSMUSG00000032423.13|synaptotagmin binding, cytoplasmic RNA interacting protein	ENSMUST00000172508.2|Syncrip|ENSMUSG00000032423.13|synaptotagmin binding, cytoplasmic RNA interacting protein
mm39_v1_chr7_+_126832399_126832491	3.49849	Sox2	ENSMUST00000056232.7|Zfp553|ENSMUSG00000045598.11|zinc finger protein 553
mm39_v1_chr7_-_29204812_29204898	3.49462	Sox2	ENSMUST00000183096.8|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3	ENSMUST00000085809.11|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3
mm39_v1_chr11_+_101207021_101207123	3.47282	Sox2	ENSMUST00000142640.8|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)	ENSMUST00000019470.14|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm39_v1_chr3_-_9029097_9029161	3.46448	Sox2	ENSMUST00000091354.12|Tpd52|ENSMUSG00000027506.16|tumor protein D52	ENSMUST00000094381.11|Tpd52|ENSMUSG00000027506.16|tumor protein D52
mm39_v1_chr11_+_3933636_3933695	3.45628	Sox2	ENSMUST00000078757.8|Gal3st1|ENSMUSG00000049721.15|galactose-3-O-sulfotransferase 1
mm39_v1_chr6_+_71684872_71684891	3.45354	Sox2	ENSMUST00000212631.2|Reep1|ENSMUSG00000052852.9|receptor accessory protein 1
mm39_v1_chr17_-_25492543_25492589	3.45086	Sox2	ENSMUST00000173621.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I	ENSMUST00000172520.2|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr16_+_44913974_44913985	3.44765	Sox2	ENSMUST00000099498.10|Ccdc80|ENSMUSG00000022665.16|coiled-coil domain containing 80
mm39_v1_chr11_-_95896721_95896778	3.4466	Sox2	ENSMUST00000013559.3|Igf2bp1|ENSMUSG00000013415.10|insulin-like growth factor 2 mRNA binding protein 1
mm39_v1_chr3_+_102965910_102966059	3.42226	Sox2	ENSMUST00000199367.5|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene	ENSMUST00000199049.5|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene	ENSMUST00000197678.5|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene
mm39_v1_chr1_-_97689263_97689391	3.41861	Sox2	ENSMUST00000171129.8|Ppip5k2|ENSMUSG00000040648.16|diphosphoinositol pentakisphosphate kinase 2
mm39_v1_chr10_+_94386714_94386765	3.37799	Sox2	ENSMUST00000148910.3|Tmcc3|ENSMUSG00000020023.19|transmembrane and coiled coil domains 3	ENSMUST00000117460.8|Tmcc3|ENSMUSG00000020023.19|transmembrane and coiled coil domains 3
mm39_v1_chr5_+_143803540_143803598	3.37545	Sox2	ENSMUST00000100487.6|Eif2ak1|ENSMUSG00000029613.16|eukaryotic translation initiation factor 2 alpha kinase 1
mm39_v1_chr17_+_23898223_23898351	3.37399	Sox2	ENSMUST00000024699.4|Cldn6|ENSMUSG00000023906.4|claudin 6	ENSMUST00000232719.2|Cldn6|ENSMUSG00000023906.4|claudin 6
mm39_v1_chr4_+_5724305_5724357	3.36825	Sox2	ENSMUST00000108380.2|Fam110b|ENSMUSG00000049119.15|family with sequence similarity 110, member B
mm39_v1_chr11_-_49603501_49603555	3.36117	Sox2	ENSMUST00000020624.7|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6	ENSMUST00000145353.8|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6
mm39_v1_chr12_-_111638722_111638772	3.35563	Sox2	ENSMUST00000001304.9|Ckb|ENSMUSG00000001270.10|creatine kinase, brain
mm39_v1_chr5_+_34140777_34140873	3.34694	Sox2	ENSMUST00000094869.12|Gm1673|ENSMUSG00000070858.13|predicted gene 1673	ENSMUST00000114383.8|Gm1673|ENSMUSG00000070858.13|predicted gene 1673
mm39_v1_chr12_-_110945052_110945077	3.34203	Sox2	ENSMUST00000140788.8|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr11_-_86964881_86964943	3.34065	Sox2	ENSMUST00000020804.8|Gdpd1|ENSMUSG00000061666.7|glycerophosphodiester phosphodiesterase domain containing 1
mm39_v1_chr12_-_40298072_40298086	3.33647	Sox2	ENSMUST00000169926.8|Ifrd1|ENSMUSG00000001627.13|interferon-related developmental regulator 1
mm39_v1_chr10_+_126899468_126899524	3.33578	Sox2	ENSMUST00000120226.8|Cdk4|ENSMUSG00000006728.13|cyclin-dependent kinase 4	ENSMUST00000133115.8|Cdk4|ENSMUSG00000006728.13|cyclin-dependent kinase 4
mm39_v1_chr17_-_7652863_7652863	3.32706	Sox2	ENSMUST00000070059.5|Unc93a2|ENSMUSG00000056133.6|unc-93 homolog A2
mm39_v1_chr5_+_75735576_75735663	3.32652	Sox2	ENSMUST00000144270.8|Kit|ENSMUSG00000005672.13|KIT proto-oncogene receptor tyrosine kinase	ENSMUST00000005815.7|Kit|ENSMUSG00000005672.13|KIT proto-oncogene receptor tyrosine kinase
mm39_v1_chr3_+_32763313_32763313	3.30329	Sox2	ENSMUST00000126144.3|Actl6a|ENSMUSG00000027671.15|actin-like 6A
mm39_v1_chrX_+_158623460_158623477	3.29142	Sox2	ENSMUST00000112451.8|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1	ENSMUST00000112453.9|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr7_-_131918926_131918957	3.29116	Sox2	ENSMUST00000080215.6|Chst15|ENSMUSG00000030930.15|carbohydrate sulfotransferase 15
mm39_v1_chr7_+_110376859_110376904	3.29088	Sox2	ENSMUST00000148292.2|Ampd3|ENSMUSG00000005686.18|adenosine monophosphate deaminase 3
mm39_v1_chr2_+_163535925_163535978	3.2869	Sox2	ENSMUST00000109400.3|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma
mm39_v1_chr1_-_36597430_36597446	3.28047	Sox2	ENSMUST00000191677.6|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C	ENSMUST00000114991.8|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm39_v1_chr7_-_19005721_19005796	3.27639	Sox2	ENSMUST00000032561.9|Vasp|ENSMUSG00000030403.10|vasodilator-stimulated phosphoprotein
mm39_v1_chr15_-_103242697_103242775	3.27212	Sox2	ENSMUST00000229373.2|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr17_-_35246886_35246992	3.26285	Sox2	ENSMUST00000040151.9|Sapcd1|ENSMUSG00000036185.10|suppressor APC domain containing 1
mm39_v1_chr8_+_34222266_34222367	3.25234	Sox2	ENSMUST00000190675.2|Gtf2e2|ENSMUSG00000031585.14|general transcription factor II E, polypeptide 2 (beta subunit)	ENSMUST00000171010.8|Gtf2e2|ENSMUSG00000031585.14|general transcription factor II E, polypeptide 2 (beta subunit)
mm39_v1_chr4_+_154255187_154255263	3.24137	Sox2	ENSMUST00000030897.15|Megf6|ENSMUSG00000057751.15|multiple EGF-like-domains 6
mm39_v1_chr12_-_100995242_100995302	3.23021	Sox2	ENSMUST00000085096.10|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chr7_+_101619019_101619047	3.22264	Sox2	ENSMUST00000084852.13|Numa1|ENSMUSG00000066306.14|nuclear mitotic apparatus protein 1
mm39_v1_chr14_-_30740946_30740999	3.20949	Sox2	ENSMUST00000228341.2|Gnl3|ENSMUSG00000042354.8|guanine nucleotide binding protein-like 3 (nucleolar)
mm39_v1_chr17_+_75312520_75312563	3.20652	Sox2	ENSMUST00000234490.2|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1	ENSMUST00000001927.12|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr14_-_52434863_52434923	3.20592	Sox2	ENSMUST00000046709.9|Supt16|ENSMUSG00000035726.9|SPT16, facilitates chromatin remodeling subunit
mm39_v1_chr5_-_134975773_134975789	3.20076	Sox2	ENSMUST00000051401.4|Cldn4|ENSMUSG00000047501.4|claudin 4
mm39_v1_chr2_+_163500290_163500430	3.19357	Sox2	ENSMUST00000164399.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000064703.13|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000099105.9|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000152418.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000126182.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000131228.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma
mm39_v1_chr2_-_60793536_60793595	3.19134	Sox2	ENSMUST00000028347.13|Rbms1|ENSMUSG00000026970.17|RNA binding motif, single stranded interacting protein 1
mm39_v1_chr2_+_155453103_155453136	3.19076	Sox2	ENSMUST00000092995.6|Myh7b|ENSMUSG00000074652.4|myosin, heavy chain 7B, cardiac muscle, beta
mm39_v1_chr2_-_153083322_153083346	3.19039	Sox2	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr11_-_100986192_100986266	3.18488	Sox2	ENSMUST00000019447.15|Psmc3ip|ENSMUSG00000019303.15|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
mm39_v1_chr2_+_167774247_167774300	3.18122	Sox2	ENSMUST00000029053.8|Ptpn1|ENSMUSG00000027540.14|protein tyrosine phosphatase, non-receptor type 1
mm39_v1_chr17_-_25492832_25492888	3.17538	Sox2	ENSMUST00000172868.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I	ENSMUST00000172618.8|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr17_-_25973288_25973356	3.16192	Sox2	ENSMUST00000075884.8|Msln|ENSMUSG00000063011.8|mesothelin	ENSMUST00000238120.2|Msln|ENSMUSG00000063011.8|mesothelin	ENSMUST00000236137.2|Msln|ENSMUSG00000063011.8|mesothelin	ENSMUST00000237359.2|Msln|ENSMUSG00000063011.8|mesothelin
mm39_v1_chr15_-_81614063_81614204	3.14582	Sox2	ENSMUST00000171115.3|Rangap1|ENSMUSG00000022391.17|RAN GTPase activating protein 1	ENSMUST00000170134.9|Rangap1|ENSMUSG00000022391.17|RAN GTPase activating protein 1	ENSMUST00000052374.13|Rangap1|ENSMUSG00000022391.17|RAN GTPase activating protein 1
mm39_v1_chr11_+_62442502_62442567	3.13808	Sox2	ENSMUST00000136938.2|Ubb|ENSMUSG00000019505.8|ubiquitin B
mm39_v1_chr8_-_125390107_125390122	3.13685	Sox2	ENSMUST00000034464.8|2310022B05Rik|ENSMUSG00000031983.8|RIKEN cDNA 2310022B05 gene
mm39_v1_chr17_-_18104182_18104216	3.13037	Sox2	ENSMUST00000061516.8|Fpr1|ENSMUSG00000045551.8|formyl peptide receptor 1
mm39_v1_chr7_+_99030621_99030781	3.1112	Sox2	ENSMUST00000037528.10|Gdpd5|ENSMUSG00000035314.11|glycerophosphodiester phosphodiesterase domain containing 5
mm39_v1_chr17_+_26471889_26471957	3.10972	Sox2	ENSMUST00000114976.9|Luc7l|ENSMUSG00000024188.17|Luc7-like	ENSMUST00000140427.8|Luc7l|ENSMUSG00000024188.17|Luc7-like	ENSMUST00000119928.8|Luc7l|ENSMUSG00000024188.17|Luc7-like
mm39_v1_chr12_+_24881582_24881657	3.10803	Sox2	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr11_+_102495189_102495262	3.10241	Sox2	ENSMUST00000057893.7|Fzd2|ENSMUSG00000050288.7|frizzled class receptor 2
mm39_v1_chr12_-_113392174_113392200	3.09009	Sox2	ENSMUST00000103427.2|Ighj4|ENSMUSG00000076618.2|immunoglobulin heavy joining 4
mm39_v1_chr6_+_128352419_128352466	3.08544	Sox2	ENSMUST00000130785.4|Tex52|ENSMUSG00000079304.6|testis expressed 52	ENSMUST00000100926.4|Tex52|ENSMUSG00000079304.6|testis expressed 52	ENSMUST00000204223.2|Gm44596|ENSMUSG00000108011.2|predicted gene 44596
mm39_v1_chr3_+_89986831_89986847	3.08114	Sox2	ENSMUST00000029549.16|Tpm3|ENSMUSG00000027940.19|tropomyosin 3, gamma
mm39_v1_chr5_-_123859153_123859175	3.07664	Sox2	ENSMUST00000196282.5|Zcchc8|ENSMUSG00000029427.12|zinc finger, CCHC domain containing 8
mm39_v1_chr11_-_116058961_116059030	3.07638	Sox2	ENSMUST00000139020.2|Fbf1|ENSMUSG00000020776.19|Fas (TNFRSF6) binding factor 1	ENSMUST00000103031.8|Fbf1|ENSMUSG00000020776.19|Fas (TNFRSF6) binding factor 1	ENSMUST00000124828.8|Fbf1|ENSMUSG00000020776.19|Fas (TNFRSF6) binding factor 1
mm39_v1_chr10_-_116899664_116899719	3.07509	Sox2	ENSMUST00000218719.2|Cct2|ENSMUSG00000034024.9|chaperonin containing Tcp1, subunit 2 (beta)	ENSMUST00000219573.2|Cct2|ENSMUSG00000034024.9|chaperonin containing Tcp1, subunit 2 (beta)	ENSMUST00000047672.9|Cct2|ENSMUSG00000034024.9|chaperonin containing Tcp1, subunit 2 (beta)
mm39_v1_chr7_-_99477551_99477624	3.07384	Sox2	ENSMUST00000036331.7|Neu3|ENSMUSG00000035239.7|neuraminidase 3
mm39_v1_chr16_+_17269845_17269903	3.06821	Sox2	ENSMUST00000006293.5|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like	ENSMUST00000231228.2|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like
mm39_v1_chr11_-_121120052_121120148	3.06436	Sox2	ENSMUST00000169393.8|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1	ENSMUST00000106115.8|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1	ENSMUST00000038709.14|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1	ENSMUST00000147490.6|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1
mm39_v1_chr10_-_22607136_22607346	3.06428	Sox2	ENSMUST00000238910.2|ENSMUSG00000118528.2|ENSMUSG00000118528.2|novel protein	ENSMUST00000127698.8|Tbpl1|ENSMUSG00000071359.14|TATA box binding protein-like 1
mm39_v1_chrX_-_23151771_23151817	3.06089	Sox2	ENSMUST00000115319.9|Klhl13|ENSMUSG00000036782.14|kelch-like 13
mm39_v1_chrX_-_56438322_56438348	3.05446	Sox2	ENSMUST00000114730.8|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome
mm39_v1_chr15_-_97729341_97729393	3.05014	Sox2	ENSMUST00000079838.14|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7	ENSMUST00000118294.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
mm39_v1_chr11_-_76462353_76462385	3.0466	Sox2	ENSMUST00000072740.13|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr5_-_123126550_123126599	3.0344	Sox2	ENSMUST00000086200.11|Kdm2b|ENSMUSG00000029475.18|lysine (K)-specific demethylase 2B	ENSMUST00000156474.8|Kdm2b|ENSMUSG00000029475.18|lysine (K)-specific demethylase 2B
mm39_v1_chr12_-_110945376_110945390	3.02567	Sox2	ENSMUST00000142012.2|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr7_-_34088886_34088904	3.02251	Sox2	ENSMUST00000155256.8|Lsm14a|ENSMUSG00000066568.13|LSM14A mRNA processing body assembly factor
mm39_v1_chr18_+_34910064_34910128	3.02182	Sox2	ENSMUST00000043775.9|Kdm3b|ENSMUSG00000038773.12|KDM3B lysine (K)-specific demethylase 3B	ENSMUST00000224715.2|Kdm3b|ENSMUSG00000038773.12|KDM3B lysine (K)-specific demethylase 3B
mm39_v1_chr5_-_114518520_114518559	3.00657	Sox2	ENSMUST00000001125.6|Kctd10|ENSMUSG00000001098.16|potassium channel tetramerisation domain containing 10
mm39_v1_chr11_-_54678433_54678531	3.00492	Sox2	ENSMUST00000153209.8|Cdc42se2|ENSMUSG00000052298.13|CDC42 small effector 2	ENSMUST00000064104.13|Cdc42se2|ENSMUSG00000052298.13|CDC42 small effector 2
mm39_v1_chrX_+_161684735_161684866	3.00369	Sox2	ENSMUST00000112302.8|Ctps2|ENSMUSG00000031360.15|cytidine 5'-triphosphate synthase 2	ENSMUST00000112301.8|Ctps2|ENSMUSG00000031360.15|cytidine 5'-triphosphate synthase 2
mm39_v1_chr12_-_112640378_112640461	3.00156	Sox2	ENSMUST00000130342.2|Akt1|ENSMUSG00000001729.15|thymoma viral proto-oncogene 1
mm39_v1_chr3_-_57755500_57755519	3.00094	Sox2	ENSMUST00000066882.10|Pfn2|ENSMUSG00000027805.17|profilin 2
mm39_v1_chr6_+_86381201_86381222	2.99803	Sox2	ENSMUST00000095754.10|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1	ENSMUST00000095753.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr8_+_110432210_110432268	2.99164	Sox2	ENSMUST00000212192.2|Zfp821|ENSMUSG00000031728.11|zinc finger protein 821
mm39_v1_chr9_-_72019109_72019191	2.99148	Sox2	ENSMUST00000183404.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12	ENSMUST00000184783.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12
mm39_v1_chrX_+_73314418_73314585	2.98739	Sox2	ENSMUST00000008826.14|Rpl10|ENSMUSG00000008682.14|ribosomal protein L10	ENSMUST00000151702.8|Rpl10|ENSMUSG00000008682.14|ribosomal protein L10	ENSMUST00000074085.12|Rpl10|ENSMUSG00000008682.14|ribosomal protein L10	ENSMUST00000135690.2|Rpl10|ENSMUSG00000008682.14|ribosomal protein L10
mm39_v1_chr1_-_54965470_54965561	2.98417	Sox2	ENSMUST00000179030.8|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44	ENSMUST00000044359.16|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44
mm39_v1_chr18_-_34757653_34757655	2.97999	Sox2	ENSMUST00000003876.10|Brd8|ENSMUSG00000003778.15|bromodomain containing 8	ENSMUST00000115766.8|Brd8|ENSMUSG00000003778.15|bromodomain containing 8	ENSMUST00000097626.10|Brd8|ENSMUSG00000003778.15|bromodomain containing 8	ENSMUST00000115765.2|Brd8|ENSMUSG00000003778.15|bromodomain containing 8
mm39_v1_chr6_+_83114020_83114070	2.97579	Sox2	ENSMUST00000121093.8|Rtkn|ENSMUSG00000034930.17|rhotekin
mm39_v1_chr7_-_44518830_44518985	2.96692	Sox2	ENSMUST00000208682.2|Ptov1|ENSMUSG00000038502.18|prostate tumor over expressed gene 1
mm39_v1_chr7_-_105131407_105131507	2.95513	Sox2	ENSMUST00000047040.4|Cavin3|ENSMUSG00000037060.4|caveolae associated 3
mm39_v1_chr13_+_94954202_94954242	2.95283	Sox2	ENSMUST00000220825.2|Tbca|ENSMUSG00000042043.7|tubulin cofactor A
mm39_v1_chr19_+_5790918_5790937	2.94531	Sox2	ENSMUST00000081496.6|Ltbp3|ENSMUSG00000024940.12|latent transforming growth factor beta binding protein 3
mm39_v1_chr7_-_44635740_44635780	2.94029	Sox2	ENSMUST00000209056.3|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000209124.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000208312.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000207659.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000045325.14|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1
mm39_v1_chr5_+_76805520_76805570	2.93952	Sox2	ENSMUST00000128112.8|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin
mm39_v1_chr5_-_147337162_147337299	2.92885	Sox2	ENSMUST00000049324.13|Flt3|ENSMUSG00000042817.16|FMS-like tyrosine kinase 3
mm39_v1_chr2_-_35322581_35322645	2.91136	Sox2	ENSMUST00000079424.11|Ggta1|ENSMUSG00000035778.18|glycoprotein galactosyltransferase alpha 1, 3
mm39_v1_chr17_+_29251602_29251655	2.90662	Sox2	ENSMUST00000130216.3|Srsf3|ENSMUSG00000071172.14|serine and arginine-rich splicing factor 3
mm39_v1_chr2_-_20973337_20973436	2.89332	Sox2	ENSMUST00000141298.9|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21	ENSMUST00000125783.3|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr6_+_51447613_51447726	2.88915	Sox2	ENSMUST00000114445.8|Cbx3|ENSMUSG00000029836.16|chromobox 3	ENSMUST00000114446.8|Cbx3|ENSMUSG00000029836.16|chromobox 3	ENSMUST00000141711.3|Cbx3|ENSMUSG00000029836.16|chromobox 3
mm39_v1_chr15_+_6416079_6416162	2.88171	Sox2	ENSMUST00000080880.12|Dab2|ENSMUSG00000022150.17|disabled 2, mitogen-responsive phosphoprotein
mm39_v1_chr16_-_18884431_18884431	2.88079	Sox2	ENSMUST00000200235.2|Iglc3|ENSMUSG00000105547.2|immunoglobulin lambda constant 3
mm39_v1_chr7_-_110682204_110682244	2.88054	Sox2	ENSMUST00000161051.8|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2	ENSMUST00000160132.8|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2	ENSMUST00000162415.9|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2
mm39_v1_chr11_-_18968955_18968973	2.87862	Sox2	ENSMUST00000068264.14|Meis1|ENSMUSG00000020160.19|Meis homeobox 1	ENSMUST00000185131.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr18_-_61919707_61919773	2.8755	Sox2	ENSMUST00000120472.2|Afap1l1|ENSMUSG00000033032.16|actin filament associated protein 1-like 1
mm39_v1_chr12_-_113823290_113823320	2.86477	Sox2	ENSMUST00000103459.5|Ighv5-17|ENSMUSG00000095571.3|immunoglobulin heavy variable 5-17
mm39_v1_chr3_+_96737385_96737430	2.86224	Sox2	ENSMUST00000058865.14|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1
mm39_v1_chr5_-_123859070_123859125	2.85628	Sox2	ENSMUST00000031376.12|Zcchc8|ENSMUSG00000029427.12|zinc finger, CCHC domain containing 8
mm39_v1_chr14_-_52553764_52553781	2.85574	Sox2	ENSMUST00000135523.5|Sall2|ENSMUSG00000049532.12|spalt like transcription factor 2
mm39_v1_chr4_+_137196080_137196124	2.854	Sox2	ENSMUST00000030547.15|Hspg2|ENSMUSG00000028763.19|perlecan (heparan sulfate proteoglycan 2)	ENSMUST00000171332.2|Hspg2|ENSMUSG00000028763.19|perlecan (heparan sulfate proteoglycan 2)
mm39_v1_chr5_+_34153328_34153375	2.84737	Sox2	ENSMUST00000056355.9|Nat8l|ENSMUSG00000048142.10|N-acetyltransferase 8-like
mm39_v1_chr5_+_122781941_122782072	2.82031	Sox2	ENSMUST00000100737.10|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000121489.8|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000031425.15|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000086247.6|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7
mm39_v1_chr7_+_30450896_30450987	2.81511	Sox2	ENSMUST00000182229.8|Sbsn|ENSMUSG00000046056.16|suprabasin	ENSMUST00000080518.14|Sbsn|ENSMUSG00000046056.16|suprabasin	ENSMUST00000182227.8|Sbsn|ENSMUSG00000046056.16|suprabasin	ENSMUST00000182721.8|Sbsn|ENSMUSG00000046056.16|suprabasin
mm39_v1_chr5_+_139238089_139238145	2.80615	Sox2	ENSMUST00000130326.8|Get4|ENSMUSG00000025858.13|golgi to ER traffic protein 4
mm39_v1_chr8_+_11606056_11606111	2.80342	Sox2	ENSMUST00000210740.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000210670.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000054399.6|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000209646.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1
mm39_v1_chr1_+_87141630_87141712	2.79784	Sox2	ENSMUST00000113232.8|Eif4e2|ENSMUSG00000026254.18|eukaryotic translation initiation factor 4E member 2	ENSMUST00000113233.8|Eif4e2|ENSMUSG00000026254.18|eukaryotic translation initiation factor 4E member 2	ENSMUST00000050876.14|Eif4e2|ENSMUSG00000026254.18|eukaryotic translation initiation factor 4E member 2	ENSMUST00000076362.12|Eif4e2|ENSMUSG00000026254.18|eukaryotic translation initiation factor 4E member 2	ENSMUST00000113235.8|Eif4e2|ENSMUSG00000026254.18|eukaryotic translation initiation factor 4E member 2	ENSMUST00000113230.8|Eif4e2|ENSMUSG00000026254.18|eukaryotic translation initiation factor 4E member 2	ENSMUST00000123735.8|Eif4e2|ENSMUSG00000026254.18|eukaryotic translation initiation factor 4E member 2
mm39_v1_chr7_-_143102524_143102579	2.78761	Sox2	ENSMUST00000208093.2|Nap1l4|ENSMUSG00000059119.10|nucleosome assembly protein 1-like 4	ENSMUST00000209098.2|Nap1l4|ENSMUSG00000059119.10|nucleosome assembly protein 1-like 4
mm39_v1_chr14_+_19801333_19801360	2.78704	Sox2	ENSMUST00000022340.5|Nid2|ENSMUSG00000021806.5|nidogen 2
mm39_v1_chr9_-_72019053_72019103	2.78585	Sox2	ENSMUST00000183492.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12	ENSMUST00000184523.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12	ENSMUST00000034755.13|Tcf12|ENSMUSG00000032228.17|transcription factor 12
mm39_v1_chr12_+_86725459_86725580	2.78004	Sox2	ENSMUST00000021681.4|Vash1|ENSMUSG00000021256.6|vasohibin 1
mm39_v1_chr11_-_5049223_5049266	2.77145	Sox2	ENSMUST00000079949.13|Ewsr1|ENSMUSG00000009079.17|Ewing sarcoma breakpoint region 1
mm39_v1_chr14_-_51162083_51162326	2.76919	Sox2	ENSMUST00000160375.8|Osgep|ENSMUSG00000006289.15|O-sialoglycoprotein endopeptidase	ENSMUST00000162177.8|Osgep|ENSMUSG00000006289.15|O-sialoglycoprotein endopeptidase
mm39_v1_chr17_-_50401305_50401360	2.7677	Sox2	ENSMUST00000113195.8|Rftn1|ENSMUSG00000039316.15|raftlin lipid raft linker 1
mm39_v1_chr8_-_8740471_8740539	2.76678	Sox2	ENSMUST00000048545.10|Arglu1|ENSMUSG00000040459.12|arginine and glutamate rich 1
mm39_v1_chr15_-_88618391_88618444	2.76493	Sox2	ENSMUST00000109381.9|Brd1|ENSMUSG00000022387.18|bromodomain containing 1
mm39_v1_chr11_+_32405367_32405438	2.7634	Sox2	ENSMUST00000051053.5|Ubtd2|ENSMUSG00000044949.5|ubiquitin domain containing 2
mm39_v1_chr9_+_99125420_99125535	2.76158	Sox2	ENSMUST00000185799.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000093795.10|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000190715.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000191335.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000190078.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70
mm39_v1_chr3_+_7568481_7568564	2.75705	Sox2	ENSMUST00000051064.9|Zc2hc1a|ENSMUSG00000043542.13|zinc finger, C2HC-type containing 1A	ENSMUST00000193010.2|Zc2hc1a|ENSMUSG00000043542.13|zinc finger, C2HC-type containing 1A
mm39_v1_chr2_+_138120401_138120451	2.75533	Sox2	ENSMUST00000075410.5|Btbd3|ENSMUSG00000062098.12|BTB (POZ) domain containing 3
mm39_v1_chr3_+_89986925_89987022	2.74514	Sox2	ENSMUST00000118566.8|Tpm3|ENSMUSG00000027940.19|tropomyosin 3, gamma	ENSMUST00000119158.8|Tpm3|ENSMUSG00000027940.19|tropomyosin 3, gamma
mm39_v1_chr17_-_12988492_12988588	2.74063	Sox2	ENSMUST00000024599.14|Igf2r|ENSMUSG00000023830.15|insulin-like growth factor 2 receptor
mm39_v1_chr11_+_20597149_20597156	2.73886	Sox2	ENSMUST00000109585.2|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chr10_-_128384994_128385174	2.73824	Sox2	ENSMUST00000177163.8|Rpl41|ENSMUSG00000093674.8|ribosomal protein L41	ENSMUST00000176683.8|Rpl41|ENSMUSG00000093674.8|ribosomal protein L41	ENSMUST00000176010.8|Rpl41|ENSMUSG00000093674.8|ribosomal protein L41
mm39_v1_chr6_-_42670021_42670034	2.73756	Sox2	ENSMUST00000121083.8|Tcaf1|ENSMUSG00000036667.15|TRPM8 channel-associated factor 1
mm39_v1_chr11_-_102338473_102338508	2.73486	Sox2	ENSMUST00000049057.5|Fam171a2|ENSMUSG00000034685.5|family with sequence similarity 171, member A2
mm39_v1_chr13_+_49495025_49495099	2.73434	Sox2	ENSMUST00000048544.14|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110084.4|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110085.11|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2
mm39_v1_chr2_+_3119371_3119429	2.73076	Sox2	ENSMUST00000115099.9|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr2_-_30305472_30305568	2.7261	Sox2	ENSMUST00000134120.2|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase	ENSMUST00000102854.10|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase
mm39_v1_chr19_-_46315543_46315595	2.72495	Sox2	ENSMUST00000223917.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000224447.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000041391.5|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000096029.12|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing
mm39_v1_chr10_-_62628008_62628070	2.71504	Sox2	ENSMUST00000217768.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000020268.7|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000218946.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000219527.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1
mm39_v1_chrX_-_93585668_93585749	2.70998	Sox2	ENSMUST00000026142.8|Maged1|ENSMUSG00000025151.17|MAGE family member D1
mm39_v1_chr18_-_88945571_88945605	2.70543	Sox2	ENSMUST00000147313.2|Socs6|ENSMUSG00000056153.16|suppressor of cytokine signaling 6
mm39_v1_chr12_-_75678092_75678134	2.70236	Sox2	ENSMUST00000238938.2|Rplp2-ps1|ENSMUSG00000118552.2|ribosomal protein, large P2, pseudogene 1
mm39_v1_chr1_+_180158035_180158058	2.6988	Sox2	ENSMUST00000070181.7|Itpkb|ENSMUSG00000038855.11|inositol 1,4,5-trisphosphate 3-kinase B
mm39_v1_chr19_-_10926598_10926651	2.69797	Sox2	ENSMUST00000025639.7|Ccdc86|ENSMUSG00000024732.8|coiled-coil domain containing 86
mm39_v1_chr15_+_85942928_85942981	2.69139	Sox2	ENSMUST00000138134.8|Gramd4|ENSMUSG00000035900.19|GRAM domain containing 4
mm39_v1_chr5_-_137870001_137870030	2.68329	Sox2	ENSMUST00000164886.2|Pilrb2|ENSMUSG00000066682.12|paired immunoglobin-like type 2 receptor beta 2
mm39_v1_chr13_-_95754987_95755006	2.68255	Sox2	ENSMUST00000059193.7|F2r|ENSMUSG00000048376.7|coagulation factor II (thrombin) receptor
mm39_v1_chr14_-_40688764_40688834	2.68238	Sox2	ENSMUST00000047652.6|Tspan14|ENSMUSG00000037824.7|tetraspanin 14
mm39_v1_chr6_-_39534765_39534801	2.68237	Sox2	ENSMUST00000036877.10|Dennd2a|ENSMUSG00000038456.10|DENN/MADD domain containing 2A	ENSMUST00000154149.2|Dennd2a|ENSMUSG00000038456.10|DENN/MADD domain containing 2A
mm39_v1_chr2_-_155953783_155953863	2.68143	Sox2	ENSMUST00000154889.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000079312.10|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000153634.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000133921.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000131377.8|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000183518.2|Gm28036|ENSMUSG00000098950.8|predicted gene, 28036	ENSMUST00000184265.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000109607.10|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000109608.9|Cpne1|ENSMUSG00000074643.13|copine I
mm39_v1_chr1_-_44157916_44157972	2.66994	Sox2	ENSMUST00000027213.14|Poglut2|ENSMUSG00000026047.14|protein O-glucosyltransferase 2	ENSMUST00000065767.9|Poglut2|ENSMUSG00000026047.14|protein O-glucosyltransferase 2
mm39_v1_chr7_-_44635813_44635992	2.65075	Sox2	ENSMUST00000208829.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000207370.2|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1	ENSMUST00000107843.11|Prmt1|ENSMUSG00000109324.3|protein arginine N-methyltransferase 1
mm39_v1_chr5_+_100187844_100187938	2.64915	Sox2	ENSMUST00000169390.8|Enoph1|ENSMUSG00000029326.14|enolase-phosphatase 1	ENSMUST00000031268.8|Enoph1|ENSMUSG00000029326.14|enolase-phosphatase 1
mm39_v1_chr11_-_77380492_77380527	2.64907	Sox2	ENSMUST00000037593.14|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b	ENSMUST00000092892.10|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b
mm39_v1_chr17_-_56019571_56019631	2.64832	Sox2	ENSMUST00000086876.7|Pot1b|ENSMUSG00000024174.10|protection of telomeres 1B	ENSMUST00000233557.2|Pot1b|ENSMUSG00000024174.10|protection of telomeres 1B	ENSMUST00000233972.2|Pot1b|ENSMUSG00000024174.10|protection of telomeres 1B
mm39_v1_chr1_-_79836344_79836413	2.64557	Sox2	ENSMUST00000027467.11|Serpine2|ENSMUSG00000026249.11|serine (or cysteine) peptidase inhibitor, clade E, member 2
mm39_v1_chr5_-_148865429_148865480	2.64394	Sox2	ENSMUST00000149169.3|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1	ENSMUST00000047257.15|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1
mm39_v1_chr4_+_150366028_150366103	2.63993	Sox2	ENSMUST00000105682.9|Rere|ENSMUSG00000039852.18|arginine glutamic acid dipeptide (RE) repeats
mm39_v1_chr2_-_6889783_6889807	2.63539	Sox2	ENSMUST00000170438.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114924.10|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114934.11|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr3_-_59118293_59118315	2.63461	Sox2	ENSMUST00000040622.3|P2ry13|ENSMUSG00000036362.3|purinergic receptor P2Y, G-protein coupled 13
mm39_v1_chr14_-_40730180_40730232	2.63116	Sox2	ENSMUST00000136661.8|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A
mm39_v1_chr5_-_114518566_114518581	2.62871	Sox2	ENSMUST00000102581.11|Kctd10|ENSMUSG00000001098.16|potassium channel tetramerisation domain containing 10
mm39_v1_chr18_+_23886765_23886782	2.62408	Sox2	ENSMUST00000115830.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2
mm39_v1_chr2_+_30331839_30331865	2.62276	Sox2	ENSMUST00000131476.8|Ptpa|ENSMUSG00000039515.12|protein phosphatase 2 protein activator
mm39_v1_chr18_+_24338358_24338406	2.61658	Sox2	ENSMUST00000000430.14|Galnt1|ENSMUSG00000000420.16|polypeptide N-acetylgalactosaminyltransferase 1
mm39_v1_chr5_+_74696110_74696185	2.6145	Sox2	ENSMUST00000080164.12|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000113536.8|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000113534.9|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000113535.9|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000120618.6|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)
mm39_v1_chr8_+_121215155_121215229	2.6119	Sox2	ENSMUST00000034279.16|Gse1|ENSMUSG00000031822.21|genetic suppressor element 1, coiled-coil protein
mm39_v1_chr2_+_124452493_124452534	2.61085	Sox2	ENSMUST00000103239.10|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	ENSMUST00000103240.9|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm39_v1_chr7_-_3901119_3901140	2.60988	Sox2	ENSMUST00000070639.8|Gm14548|ENSMUSG00000074417.10|predicted gene 14548
mm39_v1_chr13_-_46881388_46881482	2.6092	Sox2	ENSMUST00000021803.10|Nup153|ENSMUSG00000021374.11|nucleoporin 153
mm39_v1_chr7_+_127566629_127566680	2.60807	Sox2	ENSMUST00000106251.10|Fus|ENSMUSG00000030795.19|fused in sarcoma	ENSMUST00000077609.12|Fus|ENSMUSG00000030795.19|fused in sarcoma	ENSMUST00000121616.9|Fus|ENSMUSG00000030795.19|fused in sarcoma
mm39_v1_chr11_+_96214078_96214152	2.60434	Sox2	ENSMUST00000093944.10|Hoxb3|ENSMUSG00000048763.12|homeobox B3
mm39_v1_chr5_-_33375509_33375567	2.59865	Sox2	ENSMUST00000201475.2|Spon2|ENSMUSG00000037379.8|spondin 2, extracellular matrix protein
mm39_v1_chr2_-_59955995_59956119	2.59759	Sox2	ENSMUST00000112550.8|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr17_+_26471870_26471888	2.59326	Sox2	ENSMUST00000025023.15|Luc7l|ENSMUSG00000024188.17|Luc7-like
mm39_v1_chr1_+_153625161_153625188	2.59043	Sox2	ENSMUST00000086209.10|Rnasel|ENSMUSG00000066800.12|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm39_v1_chr10_+_4216353_4216380	2.58858	Sox2	ENSMUST00000045730.7|Akap12|ENSMUSG00000038587.11|A kinase (PRKA) anchor protein (gravin) 12
mm39_v1_chr3_+_88522674_88522741	2.56386	Sox2	ENSMUST00000176539.8|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2
mm39_v1_chr10_-_21036792_21036810	2.55908	Sox2	ENSMUST00000188495.8|Myb|ENSMUSG00000019982.16|myeloblastosis oncogene
mm39_v1_chr10_+_96453408_96453419	2.54965	Sox2	ENSMUST00000218953.2|Btg1|ENSMUSG00000036478.9|BTG anti-proliferation factor 1
mm39_v1_chr7_+_126359869_126359924	2.5421	Sox2	ENSMUST00000206272.2|Mapk3|ENSMUSG00000063065.14|mitogen-activated protein kinase 3
mm39_v1_chr7_-_122969064_122969144	2.53895	Sox2	ENSMUST00000207010.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000167309.8|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000205262.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000106442.9|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000098060.5|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17
mm39_v1_chr15_+_6416229_6416270	2.53871	Sox2	ENSMUST00000110664.9|Dab2|ENSMUSG00000022150.17|disabled 2, mitogen-responsive phosphoprotein	ENSMUST00000110663.9|Dab2|ENSMUSG00000022150.17|disabled 2, mitogen-responsive phosphoprotein	ENSMUST00000161812.8|Dab2|ENSMUSG00000022150.17|disabled 2, mitogen-responsive phosphoprotein	ENSMUST00000160134.8|Dab2|ENSMUSG00000022150.17|disabled 2, mitogen-responsive phosphoprotein
mm39_v1_chr12_-_21467437_21467638	2.51951	Sox2	ENSMUST00000103002.8|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	ENSMUST00000155480.9|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	ENSMUST00000135088.9|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
mm39_v1_chr11_-_106605772_106605899	2.51808	Sox2	ENSMUST00000124958.3|Pecam1|ENSMUSG00000020717.20|platelet/endothelial cell adhesion molecule 1
mm39_v1_chr4_+_154954042_154954093	2.50405	Sox2	ENSMUST00000079269.14|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1	ENSMUST00000163732.8|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1	ENSMUST00000080559.13|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1
mm39_v1_chr6_-_82751429_82751444	2.4966	Sox2	ENSMUST00000000642.11|Hk2|ENSMUSG00000000628.11|hexokinase 2
mm39_v1_chr12_-_114547622_114547683	2.48103	Sox2	ENSMUST00000193893.6|Ighv1-9|ENSMUSG00000094694.7|immunoglobulin heavy variable V1-9	ENSMUST00000103498.3|Ighv1-9|ENSMUSG00000094694.7|immunoglobulin heavy variable V1-9
mm39_v1_chr1_+_153625243_153625269	2.47666	Sox2	ENSMUST00000182722.8|Rnasel|ENSMUSG00000066800.12|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm39_v1_chr15_+_99024394_99024522	2.47489	Sox2	ENSMUST00000063517.6|Spats2|ENSMUSG00000051934.6|spermatogenesis associated, serine-rich 2
mm39_v1_chr11_-_83483807_83483913	2.47011	Sox2	ENSMUST00000019071.4|Ccl6|ENSMUSG00000018927.4|chemokine (C-C motif) ligand 6
mm39_v1_chr2_-_28473150_28473201	2.46234	Sox2	ENSMUST00000113889.9|Gtf3c5|ENSMUSG00000026816.15|general transcription factor IIIC, polypeptide 5
mm39_v1_chr7_+_4918199_4918229	2.46188	Sox2	ENSMUST00000116354.4|Zfp628|ENSMUSG00000074406.6|zinc finger protein 628
mm39_v1_chr8_+_31601837_31601919	2.45761	Sox2	ENSMUST00000046941.8|Rnf122|ENSMUSG00000039328.12|ring finger protein 122	ENSMUST00000217278.2|Rnf122|ENSMUSG00000039328.12|ring finger protein 122
mm39_v1_chr14_+_79753055_79753148	2.45543	Sox2	ENSMUST00000110835.3|Elf1|ENSMUSG00000036461.17|E74-like factor 1	ENSMUST00000227192.2|Elf1|ENSMUSG00000036461.17|E74-like factor 1
mm39_v1_chr7_+_127344942_127344999	2.4521	Sox2	ENSMUST00000189562.7|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19	ENSMUST00000186116.7|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19
mm39_v1_chr4_+_108317197_108317227	2.45172	Sox2	ENSMUST00000097925.9|Tut4|ENSMUSG00000034610.15|terminal uridylyl transferase 4
mm39_v1_chr10_-_81463091_81463154	2.44913	Sox2	ENSMUST00000143424.2|Sirt6|ENSMUSG00000034748.17|sirtuin 6	ENSMUST00000119324.8|Sirt6|ENSMUSG00000034748.17|sirtuin 6
mm39_v1_chr11_-_120881697_120881864	2.44478	Sox2	ENSMUST00000154483.8|Csnk1d|ENSMUSG00000025162.19|casein kinase 1, delta
mm39_v1_chr2_+_18059982_18060048	2.44347	Sox2	ENSMUST00000028076.15|Mllt10|ENSMUSG00000026743.17|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
mm39_v1_chr11_-_8614497_8614594	2.43719	Sox2	ENSMUST00000020695.13|Tns3|ENSMUSG00000020422.15|tensin 3
mm39_v1_chr5_-_105130522_105130584	2.43627	Sox2	ENSMUST00000031239.13|Abcg3|ENSMUSG00000029299.15|ATP binding cassette subfamily G member 3
mm39_v1_chr19_+_5524933_5524966	2.43399	Sox2	ENSMUST00000236518.2|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm39_v1_chr1_+_180468895_180468939	2.42809	Sox2	ENSMUST00000192725.6|Lin9|ENSMUSG00000058729.14|lin-9 homolog (C. elegans)
mm39_v1_chr5_+_130215996_130216007	2.42781	Sox2	ENSMUST00000119027.8|Rabgef1|ENSMUSG00000025340.15|RAB guanine nucleotide exchange factor (GEF) 1	ENSMUST00000026390.8|Rabgef1|ENSMUSG00000025340.15|RAB guanine nucleotide exchange factor (GEF) 1
mm39_v1_chr13_-_58549917_58549963	2.40621	Sox2	ENSMUST00000176305.8|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K	ENSMUST00000176558.2|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K	ENSMUST00000225674.2|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K	ENSMUST00000176849.8|Hnrnpk|ENSMUSG00000021546.19|heterogeneous nuclear ribonucleoprotein K
mm39_v1_chr19_-_10847121_10847304	2.40487	Sox2	ENSMUST00000120524.2|Tmem132a|ENSMUSG00000024736.16|transmembrane protein 132A	ENSMUST00000025645.14|Tmem132a|ENSMUSG00000024736.16|transmembrane protein 132A
mm39_v1_chr9_-_106666329_106666408	2.40148	Sox2	ENSMUST00000046502.7|Rad54l2|ENSMUSG00000040661.7|RAD54 like 2 (S. cerevisiae)
mm39_v1_chr7_-_30577511_30577561	2.39444	Sox2	ENSMUST00000214289.2|Cd22|ENSMUSG00000030577.15|CD22 antigen
mm39_v1_chr6_+_65019558_65019569	2.39276	Sox2	ENSMUST00000204801.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr10_+_53472853_53472909	2.38405	Sox2	ENSMUST00000219271.2|Asf1a|ENSMUSG00000019857.8|anti-silencing function 1A histone chaperone
mm39_v1_chr9_+_5298669_5298701	2.38212	Sox2	ENSMUST00000238505.2|Casp1|ENSMUSG00000025888.7|caspase 1
mm39_v1_chr4_-_44167509_44167609	2.37773	Sox2	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr11_-_121119864_121119921	2.37481	Sox2	ENSMUST00000137299.8|Cybc1|ENSMUSG00000039294.15|cytochrome b 245 chaperone 1
mm39_v1_chr11_+_115272732_115272759	2.37451	Sox2	ENSMUST00000053288.6|Cdr2l|ENSMUSG00000050910.6|cerebellar degeneration-related protein 2-like
mm39_v1_chr1_+_191058109_191058181	2.37315	Sox2	ENSMUST00000027940.6|Pacc1|ENSMUSG00000026627.8|proton activated chloride channel 1
mm39_v1_chr10_-_21036824_21036883	2.37191	Sox2	ENSMUST00000020158.9|Myb|ENSMUSG00000019982.16|myeloblastosis oncogene
mm39_v1_chr11_+_43419586_43419623	2.36602	Sox2	ENSMUST00000050574.7|Ccnjl|ENSMUSG00000044707.8|cyclin J-like
mm39_v1_chr14_+_60615690_60615741	2.36337	Sox2	ENSMUST00000239079.2|Amer2|ENSMUSG00000021986.10|APC membrane recruitment 2
mm39_v1_chr10_-_80257681_80257710	2.35243	Sox2	ENSMUST00000156244.2|Tcf3|ENSMUSG00000020167.15|transcription factor 3
mm39_v1_chr7_+_138828391_138828476	2.34963	Sox2	ENSMUST00000093993.5|Pwwp2b|ENSMUSG00000060260.14|PWWP domain containing 2B	ENSMUST00000172136.9|Pwwp2b|ENSMUSG00000060260.14|PWWP domain containing 2B
mm39_v1_chr8_+_106363141_106363221	2.34201	Sox2	ENSMUST00000005841.16|Ctcf|ENSMUSG00000005698.16|CCCTC-binding factor
mm39_v1_chr19_-_7360350_7360366	2.33215	Sox2	ENSMUST00000025924.4|Spindoc|ENSMUSG00000024970.6|spindlin interactor and repressor of chromatin binding
mm39_v1_chr2_-_156154667_156154667	2.32826	Sox2	ENSMUST00000079125.8|Scand1|ENSMUSG00000046229.11|SCAN domain-containing 1
mm39_v1_chr7_+_101619327_101619393	2.32577	Sox2	ENSMUST00000210475.2|Numa1|ENSMUSG00000066306.14|nuclear mitotic apparatus protein 1
mm39_v1_chr18_+_24338729_24338889	2.32405	Sox2	ENSMUST00000170243.8|Galnt1|ENSMUSG00000000420.16|polypeptide N-acetylgalactosaminyltransferase 1
mm39_v1_chr4_-_149760488_149760521	2.31641	Sox2	ENSMUST00000118704.8|Pik3cd|ENSMUSG00000039936.19|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
mm39_v1_chr12_+_85043262_85043269	2.29624	Sox2	ENSMUST00000101202.10|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1
mm39_v1_chr2_+_30697838_30698012	2.28595	Sox2	ENSMUST00000041830.10|Ntmt1|ENSMUSG00000026857.10|N-terminal Xaa-Pro-Lys N-methyltransferase 1	ENSMUST00000152374.8|Ntmt1|ENSMUSG00000026857.10|N-terminal Xaa-Pro-Lys N-methyltransferase 1
mm39_v1_chr14_-_49482846_49482931	2.26948	Sox2	ENSMUST00000227113.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000130853.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000228936.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000022398.15|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198
mm39_v1_chr16_+_44914397_44914416	2.25908	Sox2	ENSMUST00000061050.6|Ccdc80|ENSMUSG00000022665.16|coiled-coil domain containing 80
mm39_v1_chr17_-_28705055_28705075	2.25365	Sox2	ENSMUST00000233870.2|Fkbp5|ENSMUSG00000024222.18|FK506 binding protein 5
mm39_v1_chr2_-_6889685_6889782	2.25004	Sox2	ENSMUST00000183091.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000182851.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr19_+_45006552_45006651	2.24855	Sox2	ENSMUST00000237043.2|Lzts2|ENSMUSG00000035342.15|leucine zipper, putative tumor suppressor 2	ENSMUST00000178087.3|Lzts2|ENSMUSG00000035342.15|leucine zipper, putative tumor suppressor 2
mm39_v1_chr11_+_20581952_20582006	2.24796	Sox2	ENSMUST00000109586.3|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chr3_-_143910926_143910981	2.2378	Sox2	ENSMUST00000120539.8|Lmo4|ENSMUSG00000028266.18|LIM domain only 4	ENSMUST00000196264.5|Lmo4|ENSMUSG00000028266.18|LIM domain only 4
mm39_v1_chr7_-_3848050_3848050	2.23494	Sox2	ENSMUST00000108615.10|Pira2|ENSMUSG00000089942.10|paired-Ig-like receptor A2	ENSMUST00000119469.2|Pira2|ENSMUSG00000089942.10|paired-Ig-like receptor A2
mm39_v1_chr2_-_181240921_181241028	2.23377	Sox2	ENSMUST00000060173.9|Samd10|ENSMUSG00000038605.12|sterile alpha motif domain containing 10
mm39_v1_chr4_+_101504938_101504994	2.23111	Sox2	ENSMUST00000106927.2|Leprot|ENSMUSG00000035212.15|leptin receptor overlapping transcript
mm39_v1_chr11_+_6339442_6339471	2.22597	Sox2	ENSMUST00000109786.8|Zmiz2|ENSMUSG00000041164.16|zinc finger, MIZ-type containing 2
mm39_v1_chr7_+_96730915_96731001	2.22586	Sox2	ENSMUST00000206791.2|Gab2|ENSMUSG00000004508.7|growth factor receptor bound protein 2-associated protein 2
mm39_v1_chr10_+_74802996_74803035	2.22475	Sox2	ENSMUST00000037813.5|Gnaz|ENSMUSG00000040009.7|guanine nucleotide binding protein, alpha z subunit
mm39_v1_chr11_+_106107752_106107805	2.20056	Sox2	ENSMUST00000021046.6|Ddx42|ENSMUSG00000020705.7|DEAD box helicase 42
mm39_v1_chr12_-_112640626_112640710	2.20012	Sox2	ENSMUST00000001780.10|Akt1|ENSMUSG00000001729.15|thymoma viral proto-oncogene 1
mm39_v1_chr10_-_81463631_81463631	2.19756	Sox2	ENSMUST00000042923.9|Sirt6|ENSMUSG00000034748.17|sirtuin 6
mm39_v1_chr11_-_79145489_79145506	2.1936	Sox2	ENSMUST00000017821.12|Wsb1|ENSMUSG00000017677.12|WD repeat and SOCS box-containing 1
mm39_v1_chr9_+_59198829_59198896	2.18497	Sox2	ENSMUST00000217570.2|Adpgk|ENSMUSG00000025236.12|ADP-dependent glucokinase	ENSMUST00000026266.9|Adpgk|ENSMUSG00000025236.12|ADP-dependent glucokinase
mm39_v1_chr2_-_28473251_28473291	2.18248	Sox2	ENSMUST00000028157.9|Gtf3c5|ENSMUSG00000026816.15|general transcription factor IIIC, polypeptide 5
mm39_v1_chr4_+_101504909_101504934	2.18103	Sox2	ENSMUST00000030254.15|Leprot|ENSMUSG00000035212.15|leptin receptor overlapping transcript
mm39_v1_chr19_-_40502117_40502238	2.1805	Sox2	ENSMUST00000225148.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000224667.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000225153.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000238831.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000226047.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000224247.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1
mm39_v1_chr9_+_21279179_21279267	2.1801	Sox2	ENSMUST00000213518.2|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3	ENSMUST00000216892.2|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3
mm39_v1_chr9_+_21279299_21279332	2.17686	Sox2	ENSMUST00000214852.2|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3	ENSMUST00000115414.3|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3
mm39_v1_chr13_+_49658249_49658292	2.17436	Sox2	ENSMUST00000051504.8|Ecm2|ENSMUSG00000043631.9|extracellular matrix protein 2, female organ and adipocyte specific
mm39_v1_chr5_-_105198913_105198913	2.16286	Sox2	ENSMUST00000112718.5|Gbp8|ENSMUSG00000034438.17|guanylate-binding protein 8
mm39_v1_chr2_-_151815759_151815886	2.16134	Sox2	ENSMUST00000109865.8|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A	ENSMUST00000109864.8|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A
mm39_v1_chr6_-_88852017_88852036	2.16128	Sox2	ENSMUST00000145944.3|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2
mm39_v1_chr6_+_83114086_83114103	2.14327	Sox2	ENSMUST00000087938.11|Rtkn|ENSMUSG00000034930.17|rhotekin
mm39_v1_chr19_-_24938909_24938995	2.14094	Sox2	ENSMUST00000025815.10|Cbwd1|ENSMUSG00000024878.10|COBW domain containing 1
mm39_v1_chr2_-_168048795_168048842	2.13845	Sox2	ENSMUST00000057793.11|Adnp|ENSMUSG00000051149.16|activity-dependent neuroprotective protein
mm39_v1_chr19_+_8919228_8919413	2.13649	Sox2	ENSMUST00000096240.3|Mta2|ENSMUSG00000071646.10|metastasis-associated gene family, member 2
mm39_v1_chr15_+_102387053_102387105	2.13285	Sox2	ENSMUST00000230682.2|Pcbp2|ENSMUSG00000056851.15|poly(rC) binding protein 2	ENSMUST00000231085.2|Pcbp2|ENSMUSG00000056851.15|poly(rC) binding protein 2
mm39_v1_chr12_+_80837284_80837348	2.12465	Sox2	ENSMUST00000220238.2|Susd6|ENSMUSG00000021133.10|sushi domain containing 6	ENSMUST00000068519.7|Susd6|ENSMUSG00000021133.10|sushi domain containing 6
mm39_v1_chr11_-_120489172_120489231	2.10958	Sox2	ENSMUST00000026125.3|Alyref|ENSMUSG00000025134.3|Aly/REF export factor
mm39_v1_chr6_-_48025845_48025890	2.10835	Sox2	ENSMUST00000095944.10|Zfp777|ENSMUSG00000071477.11|zinc finger protein 777
mm39_v1_chr2_-_84652890_84652996	2.10337	Sox2	ENSMUST00000028471.6|Smtnl1|ENSMUSG00000027077.8|smoothelin-like 1
mm39_v1_chr5_-_137834470_137834543	2.08631	Sox2	ENSMUST00000110980.2|Pilra|ENSMUSG00000046245.14|paired immunoglobin-like type 2 receptor alpha	ENSMUST00000058897.11|Pilra|ENSMUSG00000046245.14|paired immunoglobin-like type 2 receptor alpha	ENSMUST00000199028.2|Pilra|ENSMUSG00000046245.14|paired immunoglobin-like type 2 receptor alpha
mm39_v1_chr3_-_122413361_122413372	2.07826	Sox2	ENSMUST00000239148.2|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162409.8|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162947.3|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like
mm39_v1_chr16_-_90841360_90841431	2.07706	Sox2	ENSMUST00000118522.8|Paxbp1|ENSMUSG00000022974.13|PAX3 and PAX7 binding protein 1
mm39_v1_chr9_+_3335469_3335501	2.07466	Sox2	ENSMUST00000053407.13|Alkbh8|ENSMUSG00000025899.15|alkB homolog 8, tRNA methyltransferase	ENSMUST00000211933.2|Alkbh8|ENSMUSG00000025899.15|alkB homolog 8, tRNA methyltransferase	ENSMUST00000212666.2|Alkbh8|ENSMUSG00000025899.15|alkB homolog 8, tRNA methyltransferase
mm39_v1_chr6_+_119456629_119456768	2.0743	Sox2	ENSMUST00000032094.7|Fbxl14|ENSMUSG00000030019.7|F-box and leucine-rich repeat protein 14
mm39_v1_chr7_-_44519196_44519212	2.07088	Sox2	ENSMUST00000046575.17|Ptov1|ENSMUSG00000038502.18|prostate tumor over expressed gene 1
mm39_v1_chr4_-_6990774_6990823	2.0702	Sox2	ENSMUST00000039987.4|Tox|ENSMUSG00000041272.12|thymocyte selection-associated high mobility group box
mm39_v1_chr12_+_3415143_3415207	2.06362	Sox2	ENSMUST00000020999.7|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr12_-_101785307_101785321	2.05938	Sox2	ENSMUST00000021603.9|Fbln5|ENSMUSG00000021186.10|fibulin 5
mm39_v1_chr7_+_78922947_78922973	2.05634	Sox2	ENSMUST00000037315.13|Abhd2|ENSMUSG00000039202.13|abhydrolase domain containing 2
mm39_v1_chr4_+_130297132_130297245	2.04646	Sox2	ENSMUST00000105993.4|Nkain1|ENSMUSG00000078532.10|Na+/K+ transporting ATPase interacting 1
mm39_v1_chr6_-_88851579_88851778	2.04135	Sox2	ENSMUST00000061262.11|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2	ENSMUST00000140455.8|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2	ENSMUST00000145780.2|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2
mm39_v1_chr4_-_135000109_135000130	2.0404	Sox2	ENSMUST00000037099.9|Clic4|ENSMUSG00000037242.9|chloride intracellular channel 4 (mitochondrial)
mm39_v1_chr11_+_3280771_3280812	2.03864	Sox2	ENSMUST00000136536.8|Pik3ip1|ENSMUSG00000034614.15|phosphoinositide-3-kinase interacting protein 1	ENSMUST00000093399.11|Pik3ip1|ENSMUSG00000034614.15|phosphoinositide-3-kinase interacting protein 1
mm39_v1_chr6_-_148846247_148846324	2.03394	Sox2	ENSMUST00000111562.8|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000081956.12|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor
mm39_v1_chr10_+_67021509_67021547	2.02979	Sox2	ENSMUST00000173689.8|Jmjd1c|ENSMUSG00000037876.18|jumonji domain containing 1C
mm39_v1_chr15_+_80057894_80057922	2.02919	Sox2	ENSMUST00000044970.7|Mgat3|ENSMUSG00000042428.7|mannoside acetylglucosaminyltransferase 3
mm39_v1_chr3_+_65435825_65435876	2.0286	Sox2	ENSMUST00000047906.10|Tiparp|ENSMUSG00000034640.10|TCDD-inducible poly(ADP-ribose) polymerase
mm39_v1_chr7_+_44984681_44984721	2.02726	Sox2	ENSMUST00000085351.7|Hrc|ENSMUSG00000038239.12|histidine rich calcium binding protein
mm39_v1_chr10_-_30647881_30647937	2.0269	Sox2	ENSMUST00000215740.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr19_-_5944098_5944177	2.01149	Sox2	ENSMUST00000055911.6|Tigd3|ENSMUSG00000044390.6|tigger transposable element derived 3	ENSMUST00000236767.2|Tigd3|ENSMUSG00000044390.6|tigger transposable element derived 3
mm39_v1_chr1_+_43484895_43484994	2.01131	Sox2	ENSMUST00000086421.9|Nck2|ENSMUSG00000066877.12|non-catalytic region of tyrosine kinase adaptor protein 2
mm39_v1_chr5_+_108213608_108213634	2.01022	Sox2	ENSMUST00000081567.11|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000170319.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000112626.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2
mm39_v1_chr3_-_89245297_89245374	2.00952	Sox2	ENSMUST00000029674.8|Efna4|ENSMUSG00000028040.8|ephrin A4
mm39_v1_chr3_+_88528581_88528599	1.99801	Sox2	ENSMUST00000107510.10|Arhgef2|ENSMUSG00000028059.17|rho/rac guanine nucleotide exchange factor (GEF) 2
mm39_v1_chr17_+_35354430_35354543	1.99791	Sox2	ENSMUST00000173535.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000173952.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr2_-_168608949_168608965	1.98526	Sox2	ENSMUST00000075044.10|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr7_-_26895141_26895192	1.98389	Sox2	ENSMUST00000163311.9|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A	ENSMUST00000126211.2|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A
mm39_v1_chr16_-_89615225_89615244	1.98208	Sox2	ENSMUST00000164263.9|Tiam1|ENSMUSG00000002489.17|T cell lymphoma invasion and metastasis 1
mm39_v1_chr11_+_80274105_80274223	1.97885	Sox2	ENSMUST00000165565.8|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000188489.7|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000017567.14|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000108216.8|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000053740.15|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207
mm39_v1_chr15_+_99600475_99600537	1.9762	Sox2	ENSMUST00000228984.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	ENSMUST00000229845.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr4_+_108316568_108316647	1.97464	Sox2	ENSMUST00000106673.8|Tut4|ENSMUSG00000034610.15|terminal uridylyl transferase 4	ENSMUST00000043368.12|Tut4|ENSMUSG00000034610.15|terminal uridylyl transferase 4
mm39_v1_chr17_-_78991691_78991781	1.97287	Sox2	ENSMUST00000145480.2|Strn|ENSMUSG00000024077.16|striatin, calmodulin binding protein
mm39_v1_chr12_-_101784727_101784800	1.97226	Sox2	ENSMUST00000222587.2|Fbln5|ENSMUSG00000021186.10|fibulin 5
mm39_v1_chr10_+_128139227_128139287	1.97191	Sox2	ENSMUST00000218315.2|Pan2|ENSMUSG00000005682.10|PAN2 poly(A) specific ribonuclease subunit	ENSMUST00000219721.2|Pan2|ENSMUSG00000005682.10|PAN2 poly(A) specific ribonuclease subunit
mm39_v1_chr9_+_108385247_108385292	1.96653	Sox2	ENSMUST00000207810.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000207862.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000208581.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000134939.9|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase	ENSMUST00000207713.2|Qars|ENSMUSG00000032604.17|glutaminyl-tRNA synthetase
mm39_v1_chr13_-_76091931_76092069	1.96285	Sox2	ENSMUST00000022078.12|Rhobtb3|ENSMUSG00000021589.14|Rho-related BTB domain containing 3	ENSMUST00000109606.3|Rhobtb3|ENSMUSG00000021589.14|Rho-related BTB domain containing 3
mm39_v1_chr13_+_55782814_55782864	1.95541	Sox2	ENSMUST00000172272.8|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000099479.4|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000223736.2|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46
mm39_v1_chr15_+_99600149_99600196	1.95342	Sox2	ENSMUST00000229236.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr10_-_82599967_82599991	1.94929	Sox2	ENSMUST00000130911.8|Nfyb|ENSMUSG00000020248.19|nuclear transcription factor-Y beta
mm39_v1_chr17_+_35354655_35354774	1.94506	Sox2	ENSMUST00000174478.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000174281.9|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000173550.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr2_+_4887015_4887063	1.94299	Sox2	ENSMUST00000115019.2|Sephs1|ENSMUSG00000026662.14|selenophosphate synthetase 1
mm39_v1_chr11_+_6339330_6339397	1.94187	Sox2	ENSMUST00000012612.11|Zmiz2|ENSMUSG00000041164.16|zinc finger, MIZ-type containing 2
mm39_v1_chr9_-_121825028_121825107	1.94163	Sox2	ENSMUST00000216669.2|Pomgnt2|ENSMUSG00000066235.8|protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2	ENSMUST00000215084.2|Pomgnt2|ENSMUSG00000066235.8|protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2	ENSMUST00000214533.2|Pomgnt2|ENSMUSG00000066235.8|protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2	ENSMUST00000217610.2|Pomgnt2|ENSMUSG00000066235.8|protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2	ENSMUST00000084743.7|Pomgnt2|ENSMUSG00000066235.8|protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
mm39_v1_chr14_-_30909082_30909164	1.93904	Sox2	ENSMUST00000170253.8|Nisch|ENSMUSG00000021910.16|nischarin
mm39_v1_chr6_+_83011154_83011233	1.93259	Sox2	ENSMUST00000000707.9|Loxl3|ENSMUSG00000000693.11|lysyl oxidase-like 3	ENSMUST00000101257.4|Loxl3|ENSMUSG00000000693.11|lysyl oxidase-like 3
mm39_v1_chr10_+_85665234_85665358	1.93247	Sox2	ENSMUST00000217667.2|Pwp1|ENSMUSG00000001785.14|PWP1 homolog, endonuclein
mm39_v1_chr18_+_37884653_37884705	1.9302	Sox2	ENSMUST00000194928.2|Pcdhgb7|ENSMUSG00000104063.2|protocadherin gamma subfamily B, 7
mm39_v1_chr1_+_135768595_135768617	1.92497	Sox2	ENSMUST00000112087.9|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000178854.8|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000027671.12|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000179863.8|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000112085.9|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000112086.3|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac
mm39_v1_chr11_+_99748741_99748744	1.92164	Sox2	ENSMUST00000107434.2|Gm11568|ENSMUSG00000069717.8|predicted gene 11568
mm39_v1_chr17_-_48144181_48144216	1.91782	Sox2	ENSMUST00000152455.8|Mdfi|ENSMUSG00000032717.15|MyoD family inhibitor	ENSMUST00000035375.14|Mdfi|ENSMUSG00000032717.15|MyoD family inhibitor
mm39_v1_chr17_-_28705082_28705123	1.91404	Sox2	ENSMUST00000079413.11|Fkbp5|ENSMUSG00000024222.18|FK506 binding protein 5
mm39_v1_chr9_-_110453427_110453520	1.91074	Sox2	ENSMUST00000196876.2|Nradd|ENSMUSG00000032491.15|neurotrophin receptor associated death domain	ENSMUST00000035069.14|Nradd|ENSMUSG00000032491.15|neurotrophin receptor associated death domain
mm39_v1_chr11_-_116303791_116303830	1.90465	Sox2	ENSMUST00000100202.10|Rnf157|ENSMUSG00000052949.15|ring finger protein 157	ENSMUST00000106398.9|Rnf157|ENSMUSG00000052949.15|ring finger protein 157
mm39_v1_chr15_-_103123711_103123793	1.89442	Sox2	ENSMUST00000122182.2|Cbx5|ENSMUSG00000009575.15|chromobox 5	ENSMUST00000108813.10|Cbx5|ENSMUSG00000009575.15|chromobox 5	ENSMUST00000127191.2|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr18_+_24338993_24339059	1.89273	Sox2	ENSMUST00000164998.8|Galnt1|ENSMUSG00000000420.16|polypeptide N-acetylgalactosaminyltransferase 1
mm39_v1_chr5_+_138115165_138115303	1.89217	Sox2	ENSMUST00000062350.15|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000110961.9|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000080732.10|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000110960.9|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000142185.8|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000136425.2|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21	ENSMUST00000110959.2|Zscan21|ENSMUSG00000037017.16|zinc finger and SCAN domain containing 21
mm39_v1_chr7_+_79674562_79674589	1.89208	Sox2	ENSMUST00000164056.9|Zfp710|ENSMUSG00000048897.16|zinc finger protein 710	ENSMUST00000166250.8|Zfp710|ENSMUSG00000048897.16|zinc finger protein 710
mm39_v1_chr3_+_95067759_95067817	1.88878	Sox2	ENSMUST00000131742.8|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000090823.8|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000090821.10|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm39_v1_chr7_+_24602337_24602510	1.88405	Sox2	ENSMUST00000117796.8|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000047873.16|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000098683.11|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000206508.2|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1	ENSMUST00000206028.2|Arhgef1|ENSMUSG00000040940.19|Rho guanine nucleotide exchange factor (GEF) 1
mm39_v1_chr3_+_102965601_102965684	1.88295	Sox2	ENSMUST00000029445.13|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene	ENSMUST00000200069.5|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene
mm39_v1_chr5_-_137870041_137870077	1.87813	Sox2	ENSMUST00000199773.2|Pilrb2|ENSMUSG00000066682.12|paired immunoglobin-like type 2 receptor beta 2
mm39_v1_chr18_+_36926929_36926992	1.87282	Sox2	ENSMUST00000001419.10|Zmat2|ENSMUSG00000001383.10|zinc finger, matrin type 2
mm39_v1_chr18_+_4994600_4994623	1.86747	Sox2	ENSMUST00000140448.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr6_-_52141796_52141816	1.86683	Sox2	ENSMUST00000014848.11|Hoxa2|ENSMUSG00000014704.11|homeobox A2
mm39_v1_chr10_+_17672004_17672088	1.8646	Sox2	ENSMUST00000037964.7|Txlnb|ENSMUSG00000039891.7|taxilin beta
mm39_v1_chr7_-_28071658_28071796	1.86301	Sox2	ENSMUST00000094644.11|Plekhg2|ENSMUSG00000037552.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm39_v1_chr1_+_38037086_38037096	1.86253	Sox2	ENSMUST00000027252.8|Eif5b|ENSMUSG00000026083.13|eukaryotic translation initiation factor 5B
mm39_v1_chrX_-_104973003_104973014	1.85867	Sox2	ENSMUST00000130980.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000113573.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr1_+_135764092_135764151	1.85115	Sox2	ENSMUST00000188028.7|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000178204.8|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000190451.7|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000189732.7|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac	ENSMUST00000189355.7|Tnnt2|ENSMUSG00000026414.14|troponin T2, cardiac
mm39_v1_chr5_-_38842084_38842169	1.84305	Sox2	ENSMUST00000057258.11|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B	ENSMUST00000178760.2|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B	ENSMUST00000179555.8|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B	ENSMUST00000180214.8|Zfp518b|ENSMUSG00000046572.11|zinc finger protein 518B
mm39_v1_chr8_+_93553901_93554022	1.84176	Sox2	ENSMUST00000034187.9|Mmp2|ENSMUSG00000031740.9|matrix metallopeptidase 2
mm39_v1_chr17_-_48144094_48144180	1.8415	Sox2	ENSMUST00000131971.2|Mdfi|ENSMUSG00000032717.15|MyoD family inhibitor	ENSMUST00000129360.2|Mdfi|ENSMUSG00000032717.15|MyoD family inhibitor	ENSMUST00000113280.8|Mdfi|ENSMUSG00000032717.15|MyoD family inhibitor	ENSMUST00000132125.8|Mdfi|ENSMUSG00000032717.15|MyoD family inhibitor
mm39_v1_chr11_+_93935021_93935064	1.83972	Sox2	ENSMUST00000075695.13|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9	ENSMUST00000092777.11|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr16_-_18107046_18107135	1.83963	Sox2	ENSMUST00000232424.2|Dgcr8|ENSMUSG00000022718.13|DGCR8, microprocessor complex subunit	ENSMUST00000009321.11|Dgcr8|ENSMUSG00000022718.13|DGCR8, microprocessor complex subunit
mm39_v1_chr15_-_77527470_77527486	1.83774	Sox2	ENSMUST00000181154.2|Apol11b|ENSMUSG00000091694.10|apolipoprotein L 11b	ENSMUST00000180949.8|Apol11b|ENSMUSG00000091694.10|apolipoprotein L 11b	ENSMUST00000166623.10|Apol11b|ENSMUSG00000091694.10|apolipoprotein L 11b
mm39_v1_chr18_+_24087725_24087762	1.83015	Sox2	ENSMUST00000225682.2|Zfp397|ENSMUSG00000024276.8|zinc finger protein 397	ENSMUST00000060762.6|Zfp397|ENSMUSG00000024276.8|zinc finger protein 397
mm39_v1_chrX_+_137986975_137986999	1.82366	Sox2	ENSMUST00000033625.2|4930513O06Rik|ENSMUSG00000031270.2|RIKEN cDNA 4930513O06 gene
mm39_v1_chr10_-_60055082_60055117	1.81505	Sox2	ENSMUST00000135158.9|Chst3|ENSMUSG00000057337.14|carbohydrate sulfotransferase 3
mm39_v1_chr19_-_47680528_47680535	1.81301	Sox2	ENSMUST00000026045.14|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1	ENSMUST00000086923.6|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1
mm39_v1_chr11_-_8614667_8614681	1.81038	Sox2	ENSMUST00000239111.2|Tns3|ENSMUSG00000020422.15|tensin 3
mm39_v1_chr17_+_23898633_23898711	1.80957	Sox2	ENSMUST00000233364.2|Cldn6|ENSMUSG00000023906.4|claudin 6
mm39_v1_chr18_+_35252470_35252495	1.80781	Sox2	ENSMUST00000237154.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1
mm39_v1_chr14_-_51162346_51162351	1.80595	Sox2	ENSMUST00000159292.8|Osgep|ENSMUSG00000006289.15|O-sialoglycoprotein endopeptidase
mm39_v1_chr3_-_108117754_108117818	1.80526	Sox2	ENSMUST00000117784.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2	ENSMUST00000119650.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2	ENSMUST00000117409.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2
mm39_v1_chr12_-_14202041_14202070	1.80304	Sox2	ENSMUST00000020926.8|Lratd1|ENSMUSG00000020607.8|LRAT domain containing 1
mm39_v1_chr5_-_124490296_124490364	1.80028	Sox2	ENSMUST00000111472.6|Cdk2ap1|ENSMUSG00000029394.12|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm39_v1_chr2_-_24809583_24809628	1.79966	Sox2	ENSMUST00000046227.12|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000114432.9|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000091348.11|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000102938.10|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000150379.2|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000152161.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000147147.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1
mm39_v1_chr13_+_49646794_49646794	1.79539	Sox2	ENSMUST00000222404.2|Tes3-ps|ENSMUSG00000113255.2|testis derived transcript 3, pseudogene
mm39_v1_chr3_+_89122477_89122489	1.78949	Sox2	ENSMUST00000029682.11|Thbs3|ENSMUSG00000028047.12|thrombospondin 3
mm39_v1_chr3_+_88483183_88483256	1.78734	Sox2	ENSMUST00000192688.6|Ssr2|ENSMUSG00000041355.14|signal sequence receptor, beta	ENSMUST00000193069.2|Ssr2|ENSMUSG00000041355.14|signal sequence receptor, beta	ENSMUST00000194604.2|Ssr2|ENSMUSG00000041355.14|signal sequence receptor, beta
mm39_v1_chr4_+_107659474_107659637	1.77276	Sox2	ENSMUST00000106733.10|Lrp8|ENSMUSG00000028613.16|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	ENSMUST00000238651.2|Lrp8|ENSMUSG00000028613.16|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	ENSMUST00000030356.10|Lrp8|ENSMUSG00000028613.16|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	ENSMUST00000238421.2|Lrp8|ENSMUSG00000028613.16|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	ENSMUST00000126573.8|Lrp8|ENSMUSG00000028613.16|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	ENSMUST00000238569.2|Lrp8|ENSMUSG00000028613.16|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	ENSMUST00000106732.10|Lrp8|ENSMUSG00000028613.16|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm39_v1_chr11_-_98620200_98620261	1.76301	Sox2	ENSMUST00000126565.2|Med24|ENSMUSG00000017210.15|mediator complex subunit 24	ENSMUST00000100500.9|Med24|ENSMUSG00000017210.15|mediator complex subunit 24	ENSMUST00000017354.13|Med24|ENSMUSG00000017210.15|mediator complex subunit 24
mm39_v1_chr17_-_36014892_36015031	1.75912	Sox2	ENSMUST00000097333.10|Ddr1|ENSMUSG00000003534.18|discoidin domain receptor family, member 1	ENSMUST00000003628.13|Ddr1|ENSMUSG00000003534.18|discoidin domain receptor family, member 1
mm39_v1_chr6_+_86381236_86381302	1.74977	Sox2	ENSMUST00000095752.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1	ENSMUST00000130967.8|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr9_-_108455899_108455938	1.74387	Sox2	ENSMUST00000068700.7|Wdr6|ENSMUSG00000066357.7|WD repeat domain 6
mm39_v1_chr15_+_99599978_99600010	1.73738	Sox2	ENSMUST00000023759.6|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chrX_+_156481906_156482009	1.73332	Sox2	ENSMUST00000136141.2|Smpx|ENSMUSG00000041476.13|small muscle protein, X-linked	ENSMUST00000190091.7|Smpx|ENSMUSG00000041476.13|small muscle protein, X-linked
mm39_v1_chrX_+_7765589_7765602	1.73274	Sox2	ENSMUST00000033498.10|Timm17b|ENSMUSG00000031158.12|translocase of inner mitochondrial membrane 17b
mm39_v1_chr1_+_64571942_64572013	1.72235	Sox2	ENSMUST00000171164.8|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000187811.7|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000049932.12|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1	ENSMUST00000087366.11|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1
mm39_v1_chr16_+_38383182_38383275	1.71735	Sox2	ENSMUST00000163948.8|Tmem39a|ENSMUSG00000002845.15|transmembrane protein 39a
mm39_v1_chr3_+_89122499_89122550	1.71679	Sox2	ENSMUST00000142051.8|Thbs3|ENSMUSG00000028047.12|thrombospondin 3	ENSMUST00000119084.2|Thbs3|ENSMUSG00000028047.12|thrombospondin 3
mm39_v1_chr9_-_107749982_107750028	1.71323	Sox2	ENSMUST00000183032.8|Rbm6|ENSMUSG00000032582.15|RNA binding motif protein 6	ENSMUST00000035201.13|Rbm6|ENSMUSG00000032582.15|RNA binding motif protein 6
mm39_v1_chr1_-_34882131_34882148	1.71052	Sox2	ENSMUST00000167518.8|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B	ENSMUST00000047534.12|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B
mm39_v1_chr9_+_53678801_53678830	1.70512	Sox2	ENSMUST00000048670.10|Slc35f2|ENSMUSG00000042195.10|solute carrier family 35, member F2
mm39_v1_chr8_-_9821021_9821161	1.69982	Sox2	ENSMUST00000208933.2|Fam155a|ENSMUSG00000079157.5|family with sequence similarity 155, member A	ENSMUST00000110969.5|Fam155a|ENSMUSG00000079157.5|family with sequence similarity 155, member A
mm39_v1_chr1_-_34882045_34882067	1.69962	Sox2	ENSMUST00000170092.8|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B
mm39_v1_chr17_-_88372671_88372719	1.69533	Sox2	ENSMUST00000235112.2|Fbxo11|ENSMUSG00000005371.16|F-box protein 11	ENSMUST00000005504.15|Fbxo11|ENSMUSG00000005371.16|F-box protein 11
mm39_v1_chr10_+_128139191_128139221	1.69414	Sox2	ENSMUST00000005825.8|Pan2|ENSMUSG00000005682.10|PAN2 poly(A) specific ribonuclease subunit
mm39_v1_chr14_-_54815000_54815015	1.68803	Sox2	ENSMUST00000054487.10|Ajuba|ENSMUSG00000022178.12|ajuba LIM protein
mm39_v1_chr1_-_181847492_181847555	1.6849	Sox2	ENSMUST00000177811.8|Enah|ENSMUSG00000022995.17|ENAH actin regulator	ENSMUST00000111025.8|Enah|ENSMUSG00000022995.17|ENAH actin regulator	ENSMUST00000111024.10|Enah|ENSMUSG00000022995.17|ENAH actin regulator
mm39_v1_chr15_+_91722524_91722539	1.68066	Sox2	ENSMUST00000109276.8|Smgc|ENSMUSG00000047295.17|submandibular gland protein C	ENSMUST00000088555.10|Smgc|ENSMUSG00000047295.17|submandibular gland protein C	ENSMUST00000100293.9|Smgc|ENSMUSG00000047295.17|submandibular gland protein C	ENSMUST00000239545.1|ENSMUSG00000118670.1|ENSMUSG00000118670.1|mucin 19	ENSMUST00000126508.8|Smgc|ENSMUSG00000047295.17|submandibular gland protein C
mm39_v1_chr1_-_34882068_34882122	1.67397	Sox2	ENSMUST00000185231.2|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B	ENSMUST00000191307.7|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B
mm39_v1_chr3_+_95018324_95018398	1.67375	Sox2	ENSMUST00000009102.9|Vps72|ENSMUSG00000008958.15|vacuolar protein sorting 72
mm39_v1_chr4_+_6191084_6191122	1.67351	Sox2	ENSMUST00000029907.6|Ubxn2b|ENSMUSG00000028243.6|UBX domain protein 2B
mm39_v1_chr9_-_79625800_79625854	1.67095	Sox2	ENSMUST00000071750.13|Col12a1|ENSMUSG00000032332.18|collagen, type XII, alpha 1
mm39_v1_chr3_+_138058139_138058139	1.67036	Sox2	ENSMUST00000090166.5|Adh6b|ENSMUSG00000074206.8|alcohol dehydrogenase 6B (class V)
mm39_v1_chr1_-_176641607_176641633	1.66824	Sox2	ENSMUST00000195717.6|Cep170|ENSMUSG00000057335.12|centrosomal protein 170	ENSMUST00000192961.6|Cep170|ENSMUSG00000057335.12|centrosomal protein 170
mm39_v1_chr3_+_69224189_69224202	1.66758	Sox2	ENSMUST00000029355.9|Ppm1l|ENSMUSG00000027784.11|protein phosphatase 1 (formerly 2C)-like
mm39_v1_chr7_+_140776763_140776847	1.66165	Sox2	ENSMUST00000144008.2|Lrrc56|ENSMUSG00000038637.16|leucine rich repeat containing 56
mm39_v1_chr1_-_166237341_166237432	1.65955	Sox2	ENSMUST00000135673.8|Pogk|ENSMUSG00000040596.16|pogo transposable element with KRAB domain	ENSMUST00000169324.8|Pogk|ENSMUSG00000040596.16|pogo transposable element with KRAB domain	ENSMUST00000128861.3|Pogk|ENSMUSG00000040596.16|pogo transposable element with KRAB domain
mm39_v1_chr11_-_100098333_100098374	1.65635	Sox2	ENSMUST00000007272.8|Krt14|ENSMUSG00000045545.9|keratin 14
mm39_v1_chr14_+_47536075_47536228	1.65223	Sox2	ENSMUST00000227554.2|Mapk1ip1l|ENSMUSG00000021840.18|mitogen-activated protein kinase 1 interacting protein 1-like
mm39_v1_chr4_-_11254253_11254266	1.65059	Sox2	ENSMUST00000044616.10|Ints8|ENSMUSG00000040738.11|integrator complex subunit 8	ENSMUST00000108319.9|Ints8|ENSMUSG00000040738.11|integrator complex subunit 8	ENSMUST00000108318.3|Ints8|ENSMUSG00000040738.11|integrator complex subunit 8
mm39_v1_chr12_-_114117264_114117344	1.64304	Sox2	ENSMUST00000103461.5|Ighv7-3|ENSMUSG00000076652.5|immunoglobulin heavy variable 7-3
mm39_v1_chr2_-_168048984_168049062	1.64014	Sox2	ENSMUST00000088001.6|Adnp|ENSMUSG00000051149.16|activity-dependent neuroprotective protein
mm39_v1_chr10_+_40225272_40225385	1.6369	Sox2	ENSMUST00000044672.11|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19	ENSMUST00000095743.4|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19
mm39_v1_chr6_-_129449739_129449755	1.63579	Sox2	ENSMUST00000112076.9|Clec7a|ENSMUSG00000079293.12|C-type lectin domain family 7, member a	ENSMUST00000184581.3|Clec7a|ENSMUSG00000079293.12|C-type lectin domain family 7, member a
mm39_v1_chr5_+_24569802_24569823	1.62937	Sox2	ENSMUST00000115090.6|Nos3|ENSMUSG00000028978.13|nitric oxide synthase 3, endothelial cell	ENSMUST00000030834.7|Nos3|ENSMUSG00000028978.13|nitric oxide synthase 3, endothelial cell
mm39_v1_chr9_+_21279161_21279178	1.62088	Sox2	ENSMUST00000067646.12|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3
mm39_v1_chr2_+_156154219_156154347	1.62057	Sox2	ENSMUST00000037096.9|Cnbd2|ENSMUSG00000038085.14|cyclic nucleotide binding domain containing 2
mm39_v1_chr2_+_122256913_122256958	1.60721	Sox2	ENSMUST00000110525.8|Slc28a2|ENSMUSG00000027219.14|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
mm39_v1_chr2_+_3119442_3119513	1.6063	Sox2	ENSMUST00000091505.11|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr6_-_116605914_116605965	1.60061	Sox2	ENSMUST00000079749.6|Zfp422|ENSMUSG00000059878.13|zinc finger protein 422
mm39_v1_chr15_+_99024669_99024703	1.59848	Sox2	ENSMUST00000229066.2|Spats2|ENSMUSG00000051934.6|spermatogenesis associated, serine-rich 2	ENSMUST00000229663.2|Spats2|ENSMUSG00000051934.6|spermatogenesis associated, serine-rich 2
mm39_v1_chr8_-_125675901_125676110	1.5984	Sox2	ENSMUST00000034469.7|Egln1|ENSMUSG00000031987.7|egl-9 family hypoxia-inducible factor 1
mm39_v1_chr3_-_95135946_95136043	1.59008	Sox2	ENSMUST00000065482.6|Mllt11|ENSMUSG00000053192.10|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
mm39_v1_chr12_-_114487525_114487579	1.58934	Sox2	ENSMUST00000103495.3|Ighv10-3|ENSMUSG00000095700.3|immunoglobulin heavy variable V10-3
mm39_v1_chr3_-_38538980_38539016	1.58378	Sox2	ENSMUST00000120875.8|Ankrd50|ENSMUSG00000044864.17|ankyrin repeat domain 50
mm39_v1_chr3_-_116762476_116762507	1.58012	Sox2	ENSMUST00000119557.8|Palmd|ENSMUSG00000033377.15|palmdelphin
mm39_v1_chr19_-_45771939_45772000	1.5699	Sox2	ENSMUST00000026243.5|Oga|ENSMUSG00000025220.9|O-GlcNAcase
mm39_v1_chr1_-_55265925_55265971	1.56957	Sox2	ENSMUST00000027121.15|Rftn2|ENSMUSG00000025978.15|raftlin family member 2	ENSMUST00000114428.3|Rftn2|ENSMUSG00000025978.15|raftlin family member 2
mm39_v1_chr15_+_99936516_99936552	1.56559	Sox2	ENSMUST00000100203.10|Dip2b|ENSMUSG00000023026.17|disco interacting protein 2 homolog B
mm39_v1_chr13_-_49024583_49024642	1.56518	Sox2	ENSMUST00000035540.9|Phf2|ENSMUSG00000038025.9|PHD finger protein 2
mm39_v1_chr6_-_116605882_116605897	1.56381	Sox2	ENSMUST00000057540.6|Zfp422|ENSMUSG00000059878.13|zinc finger protein 422
mm39_v1_chr4_+_133829898_133829929	1.56131	Sox2	ENSMUST00000070246.9|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11	ENSMUST00000156750.2|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11
mm39_v1_chr13_-_117161921_117161980	1.55402	Sox2	ENSMUST00000223949.2|Parp8|ENSMUSG00000021725.10|poly (ADP-ribose) polymerase family, member 8
mm39_v1_chr17_+_66089568_66089775	1.55124	Sox2	ENSMUST00000161324.8|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000161127.8|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1
mm39_v1_chr19_-_5711650_5711695	1.5487	Sox2	ENSMUST00000236006.2|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1
mm39_v1_chr8_-_85414528_85414539	1.54605	Sox2	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr4_+_155924181_155924219	1.53266	Sox2	ENSMUST00000030947.4|Mxra8|ENSMUSG00000029070.10|matrix-remodelling associated 8
mm39_v1_chr2_-_30305779_30305825	1.52732	Sox2	ENSMUST00000102855.8|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase	ENSMUST00000028207.13|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase
mm39_v1_chr1_-_173569301_173569352	1.52556	Sox2	ENSMUST00000042610.15|Ifi207|ENSMUSG00000073490.12|interferon activated gene 207	ENSMUST00000127730.2|Ifi207|ENSMUSG00000073490.12|interferon activated gene 207
mm39_v1_chr14_-_20784625_20784652	1.52058	Sox2	ENSMUST00000223679.2|Ndst2|ENSMUSG00000039308.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm39_v1_chr17_+_34457868_34457938	1.51618	Sox2	ENSMUST00000095342.11|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus	ENSMUST00000167280.8|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus	ENSMUST00000236838.2|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus
mm39_v1_chr5_-_136273691_136273780	1.51513	Sox2	ENSMUST00000196447.2|Sh2b2|ENSMUSG00000005057.14|SH2B adaptor protein 2	ENSMUST00000196397.5|Sh2b2|ENSMUSG00000005057.14|SH2B adaptor protein 2	ENSMUST00000005188.14|Sh2b2|ENSMUSG00000005057.14|SH2B adaptor protein 2
mm39_v1_chr2_+_180222985_180223097	1.51113	Sox2	ENSMUST00000169630.8|Mrgbp|ENSMUSG00000027569.16|MRG/MORF4L binding protein
mm39_v1_chr16_-_97412169_97412395	1.51101	Sox2	ENSMUST00000232141.2|Tmprss2|ENSMUSG00000000385.9|transmembrane protease, serine 2	ENSMUST00000000395.8|Tmprss2|ENSMUSG00000000385.9|transmembrane protease, serine 2
mm39_v1_chr14_+_54713557_54713647	1.50736	Sox2	ENSMUST00000164766.8|Rem2|ENSMUSG00000022176.12|rad and gem related GTP binding protein 2
mm39_v1_chr18_+_36893267_36893345	1.50446	Sox2	ENSMUST00000049323.9|Wdr55|ENSMUSG00000042660.9|WD repeat domain 55
mm39_v1_chr14_+_73475335_73475447	1.49675	Sox2	ENSMUST00000044405.8|Lpar6|ENSMUSG00000033446.8|lysophosphatidic acid receptor 6
mm39_v1_chrX_-_9983836_9983948	1.49656	Sox2	ENSMUST00000115543.3|Srpx|ENSMUSG00000090084.8|sushi-repeat-containing protein	ENSMUST00000044789.10|Srpx|ENSMUSG00000090084.8|sushi-repeat-containing protein	ENSMUST00000115544.9|Srpx|ENSMUSG00000090084.8|sushi-repeat-containing protein
mm39_v1_chr9_+_55949141_55949164	1.49002	Sox2	ENSMUST00000114276.3|Rcn2|ENSMUSG00000032320.8|reticulocalbin 2
mm39_v1_chr14_+_73379930_73380005	1.47678	Sox2	ENSMUST00000170370.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000164822.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	ENSMUST00000165429.8|Rcbtb2|ENSMUSG00000022106.15|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm39_v1_chr9_-_58220469_58220498	1.47309	Sox2	ENSMUST00000061799.10|Loxl1|ENSMUSG00000032334.11|lysyl oxidase-like 1
mm39_v1_chr4_-_130068902_130068932	1.46603	Sox2	ENSMUST00000105998.8|Tinagl1|ENSMUSG00000028776.15|tubulointerstitial nephritis antigen-like 1
mm39_v1_chr19_+_55883924_55883942	1.46285	Sox2	ENSMUST00000111646.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr9_-_35179042_35179101	1.46212	Sox2	ENSMUST00000217306.2|Fam118b|ENSMUSG00000050471.18|family with sequence similarity 118, member B	ENSMUST00000125087.2|Fam118b|ENSMUSG00000050471.18|family with sequence similarity 118, member B	ENSMUST00000121564.8|Fam118b|ENSMUSG00000050471.18|family with sequence similarity 118, member B	ENSMUST00000063782.12|Fam118b|ENSMUSG00000050471.18|family with sequence similarity 118, member B	ENSMUST00000059057.14|Fam118b|ENSMUSG00000050471.18|family with sequence similarity 118, member B
mm39_v1_chr15_-_79626719_79626763	1.45961	Sox2	ENSMUST00000089311.11|Sun2|ENSMUSG00000042524.15|Sad1 and UNC84 domain containing 2	ENSMUST00000046259.14|Sun2|ENSMUSG00000042524.15|Sad1 and UNC84 domain containing 2
mm39_v1_chr12_-_69403892_69403956	1.45914	Sox2	ENSMUST00000222065.2|Nemf|ENSMUSG00000020982.10|nuclear export mediator factor	ENSMUST00000021368.10|Nemf|ENSMUSG00000020982.10|nuclear export mediator factor
mm39_v1_chr9_+_22010512_22010583	1.4561	Sox2	ENSMUST00000214601.2|Cnn1|ENSMUSG00000001349.6|calponin 1	ENSMUST00000001384.6|Cnn1|ENSMUSG00000001349.6|calponin 1
mm39_v1_chr18_+_82493284_82493293	1.45441	Sox2	ENSMUST00000047865.14|Mbp|ENSMUSG00000041607.18|myelin basic protein
mm39_v1_chr2_+_3119558_3119722	1.45289	Sox2	ENSMUST00000062934.7|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr16_+_87495792_87495872	1.45071	Sox2	ENSMUST00000026703.6|Bach1|ENSMUSG00000025612.6|BTB and CNC homology 1, basic leucine zipper transcription factor 1
mm39_v1_chr3_+_88624194_88624213	1.44629	Sox2	ENSMUST00000172252.2|Rit1|ENSMUSG00000028057.15|Ras-like without CAAX 1
mm39_v1_chr5_-_110534828_110535020	1.44608	Sox2	ENSMUST00000198834.2|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1	ENSMUST00000056124.11|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1
mm39_v1_chr5_-_122917341_122917496	1.44461	Sox2	ENSMUST00000198257.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000199599.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000196742.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000200109.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000111668.8|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm39_v1_chr9_+_102597486_102597536	1.44273	Sox2	ENSMUST00000130602.2|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2
mm39_v1_chr4_+_109092610_109092610	1.44021	Sox2	ENSMUST00000106628.8|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr1_+_159871943_159872024	1.43661	Sox2	ENSMUST00000163892.8|4930523C07Rik|ENSMUSG00000090394.9|RIKEN cDNA 4930523C07 gene
mm39_v1_chr5_-_21260878_21260960	1.43324	Sox2	ENSMUST00000030556.8|Ptpn12|ENSMUSG00000028771.14|protein tyrosine phosphatase, non-receptor type 12
mm39_v1_chr7_-_111379170_111379200	1.43214	Sox2	ENSMUST00000049430.15|Galnt18|ENSMUSG00000038296.15|polypeptide N-acetylgalactosaminyltransferase 18	ENSMUST00000106663.2|Galnt18|ENSMUSG00000038296.15|polypeptide N-acetylgalactosaminyltransferase 18
mm39_v1_chr7_-_127474806_127474851	1.42948	Sox2	ENSMUST00000106261.8|Zfp668|ENSMUSG00000049728.15|zinc finger protein 668	ENSMUST00000144721.2|Zfp668|ENSMUSG00000049728.15|zinc finger protein 668
mm39_v1_chr6_-_50359797_50359829	1.42484	Sox2	ENSMUST00000114468.9|Osbpl3|ENSMUSG00000029822.16|oxysterol binding protein-like 3
mm39_v1_chr11_-_106641454_106641483	1.42214	Sox2	ENSMUST00000068021.9|Pecam1|ENSMUSG00000020717.20|platelet/endothelial cell adhesion molecule 1
mm39_v1_chr8_-_123404811_123404921	1.41934	Sox2	ENSMUST00000006525.14|Cbfa2t3|ENSMUSG00000006362.17|CBFA2/RUNX1 translocation partner 3	ENSMUST00000064674.13|Cbfa2t3|ENSMUSG00000006362.17|CBFA2/RUNX1 translocation partner 3
mm39_v1_chr4_-_44167904_44167975	1.41592	Sox2	ENSMUST00000102934.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr14_+_47885900_47885939	1.41556	Sox2	ENSMUST00000187839.8|Ktn1|ENSMUSG00000021843.18|kinectin 1
mm39_v1_chr1_-_21149392_21149467	1.41328	Sox2	ENSMUST00000037998.6|Tram2|ENSMUSG00000041779.6|translocating chain-associating membrane protein 2
mm39_v1_chr16_+_57369595_57369620	1.41219	Sox2	ENSMUST00000159414.2|Filip1l|ENSMUSG00000043336.15|filamin A interacting protein 1-like
mm39_v1_chr1_+_58432278_58432310	1.41211	Sox2	ENSMUST00000188898.7|Bzw1|ENSMUSG00000051223.15|basic leucine zipper and W2 domains 1
mm39_v1_chr2_+_26205525_26205614	1.40391	Sox2	ENSMUST00000066936.9|Gpsm1|ENSMUSG00000026930.16|G-protein signalling modulator 1 (AGS3-like, C. elegans)	ENSMUST00000078616.12|Gpsm1|ENSMUSG00000026930.16|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm39_v1_chr2_+_85780781_85780781	1.38895	Sox2	ENSMUST00000080698.3|Olfr1028|ENSMUSG00000057207.3|olfactory receptor 1028
mm39_v1_chr1_-_173703424_173703430	1.38643	Sox2	ENSMUST00000186442.7|Mndal|ENSMUSG00000090272.10|myeloid nuclear differentiation antigen like
mm39_v1_chr4_-_82939330_82939372	1.38587	Sox2	ENSMUST00000071708.12|Frem1|ENSMUSG00000059049.15|Fras1 related extracellular matrix protein 1
mm39_v1_chr2_-_165740864_165740936	1.38514	Sox2	ENSMUST00000136842.2|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8
mm39_v1_chr11_+_67061908_67062046	1.38484	Sox2	ENSMUST00000018641.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr1_+_43571536_43571565	1.38444	Sox2	ENSMUST00000202540.2|Nck2|ENSMUSG00000066877.12|non-catalytic region of tyrosine kinase adaptor protein 2
mm39_v1_chr11_+_67061837_67061866	1.37765	Sox2	ENSMUST00000170159.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr13_-_117162041_117162077	1.3649	Sox2	ENSMUST00000022239.8|Parp8|ENSMUSG00000021725.10|poly (ADP-ribose) polymerase family, member 8
mm39_v1_chr19_+_10666085_10666184	1.35999	Sox2	ENSMUST00000237240.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235927.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000087951.7|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000237437.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235921.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C
mm39_v1_chr13_+_83652352_83652374	1.35879	Sox2	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr15_+_76130947_76131006	1.35842	Sox2	ENSMUST00000229772.2|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	ENSMUST00000230347.2|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	ENSMUST00000023225.8|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
mm39_v1_chr3_-_53370621_53370753	1.35342	Sox2	ENSMUST00000056749.14|Nhlrc3|ENSMUSG00000042997.14|NHL repeat containing 3
mm39_v1_chr18_+_74401246_74401279	1.34626	Sox2	ENSMUST00000239157.2|Mbd1|ENSMUSG00000024561.12|methyl-CpG binding domain protein 1	ENSMUST00000097530.5|Mbd1|ENSMUSG00000024561.12|methyl-CpG binding domain protein 1
mm39_v1_chr7_+_125871761_125871791	1.34562	Sox2	ENSMUST00000056028.11|Sbk1|ENSMUSG00000042978.12|SH3-binding kinase 1
mm39_v1_chr15_-_79626694_79626712	1.3403	Sox2	ENSMUST00000100439.10|Sun2|ENSMUSG00000042524.15|Sad1 and UNC84 domain containing 2
mm39_v1_chr18_+_35347983_35348189	1.33378	Sox2	ENSMUST00000235449.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1	ENSMUST00000235269.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1
mm39_v1_chr2_+_68691778_68691854	1.33173	Sox2	ENSMUST00000028426.9|Cers6|ENSMUSG00000027035.11|ceramide synthase 6
mm39_v1_chr1_+_64729603_64729625	1.32718	Sox2	ENSMUST00000114077.8|Ccnyl1|ENSMUSG00000070871.11|cyclin Y-like 1
mm39_v1_chr5_-_137784912_137784930	1.32285	Sox2	ENSMUST00000031740.16|Mepce|ENSMUSG00000029726.17|methylphosphate capping enzyme
mm39_v1_chr6_-_28397997_28398026	1.32153	Sox2	ENSMUST00000035930.11|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800
mm39_v1_chr5_-_38316296_38316375	1.31755	Sox2	ENSMUST00000201415.4|Nsg1|ENSMUSG00000029126.8|neuron specific gene family member 1
mm39_v1_chr17_+_31810693_31810729	1.30567	Sox2	ENSMUST00000236493.2|Pknox1|ENSMUSG00000006705.14|Pbx/knotted 1 homeobox	ENSMUST00000237038.2|Pknox1|ENSMUSG00000006705.14|Pbx/knotted 1 homeobox	ENSMUST00000237748.2|Pknox1|ENSMUSG00000006705.14|Pbx/knotted 1 homeobox	ENSMUST00000235255.2|Pknox1|ENSMUSG00000006705.14|Pbx/knotted 1 homeobox
mm39_v1_chr8_+_126396557_126396613	1.29917	Sox2	ENSMUST00000053078.5|Map10|ENSMUSG00000050930.6|microtubule-associated protein 10
mm39_v1_chr12_-_80690573_80690631	1.29836	Sox2	ENSMUST00000166931.2|Erh|ENSMUSG00000021131.15|ERH mRNA splicing and mitosis factor	ENSMUST00000218364.2|Erh|ENSMUSG00000021131.15|ERH mRNA splicing and mitosis factor
mm39_v1_chr19_+_12438125_12438147	1.29794	Sox2	ENSMUST00000081035.9|Mpeg1|ENSMUSG00000046805.11|macrophage expressed gene 1
mm39_v1_chr11_-_50183129_50183191	1.29719	Sox2	ENSMUST00000059458.5|Maml1|ENSMUSG00000050567.17|mastermind like transcriptional coactivator 1
mm39_v1_chr17_-_88372315_88372456	1.2951	Sox2	ENSMUST00000235056.2|Fbxo11|ENSMUSG00000005371.16|F-box protein 11	ENSMUST00000130379.9|Fbxo11|ENSMUSG00000005371.16|F-box protein 11
mm39_v1_chr11_-_107361525_107361554	1.2942	Sox2	ENSMUST00000103064.10|Pitpnc1|ENSMUSG00000040430.19|phosphatidylinositol transfer protein, cytoplasmic 1
mm39_v1_chr10_-_8394546_8394616	1.29042	Sox2	ENSMUST00000061601.9|Ust|ENSMUSG00000047712.9|uronyl-2-sulfotransferase
mm39_v1_chr2_+_146854916_146855008	1.28791	Sox2	ENSMUST00000028921.6|Xrn2|ENSMUSG00000027433.6|5'-3' exoribonuclease 2
mm39_v1_chr4_+_130519788_130519983	1.28246	Sox2	ENSMUST00000070478.4|Sdc3|ENSMUSG00000025743.15|syndecan 3
mm39_v1_chrX_-_52459347_52459379	1.27945	Sox2	ENSMUST00000096447.9|Mospd1|ENSMUSG00000023074.12|motile sperm domain containing 1	ENSMUST00000023836.4|Mospd1|ENSMUSG00000023074.12|motile sperm domain containing 1
mm39_v1_chr4_+_32238712_32238804	1.27652	Sox2	ENSMUST00000108180.9|Bach2|ENSMUSG00000040270.17|BTB and CNC homology, basic leucine zipper transcription factor 2
mm39_v1_chr10_+_23727325_23727386	1.27531	Sox2	ENSMUST00000020190.8|Vnn3|ENSMUSG00000020010.8|vanin 3
mm39_v1_chr17_-_25492129_25492235	1.27506	Sox2	ENSMUST00000173231.2|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr5_+_52940391_52940458	1.27215	Sox2	ENSMUST00000031077.13|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4	ENSMUST00000113904.9|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4	ENSMUST00000199840.2|Zcchc4|ENSMUSG00000029179.15|zinc finger, CCHC domain containing 4
mm39_v1_chr4_-_152080634_152080715	1.27107	Sox2	ENSMUST00000055688.10|Phf13|ENSMUSG00000047777.10|PHD finger protein 13
mm39_v1_chr8_+_11777721_11777831	1.26616	Sox2	ENSMUST00000210104.2|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)
mm39_v1_chr17_-_32074754_32074780	1.26426	Sox2	ENSMUST00000024839.6|Sik1|ENSMUSG00000024042.8|salt inducible kinase 1
mm39_v1_chr6_-_38852899_38852919	1.26265	Sox2	ENSMUST00000160360.2|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chrX_-_58613428_58613454	1.26154	Sox2	ENSMUST00000119833.8|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13	ENSMUST00000131319.8|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13
mm39_v1_chr3_+_95532282_95532332	1.26059	Sox2	ENSMUST00000058230.13|Ensa|ENSMUSG00000038619.13|endosulfine alpha	ENSMUST00000037983.6|Ensa|ENSMUSG00000038619.13|endosulfine alpha
mm39_v1_chr2_+_153538572_153538572	1.25943	Sox2	ENSMUST00000119996.3|Dnmt3c|ENSMUSG00000082079.3|DNA methyltransferase 3C
mm39_v1_chr11_+_5738480_5738560	1.24764	Sox2	ENSMUST00000109845.8|Dbnl|ENSMUSG00000020476.15|drebrin-like	ENSMUST00000020769.14|Dbnl|ENSMUSG00000020476.15|drebrin-like	ENSMUST00000102928.5|Dbnl|ENSMUSG00000020476.15|drebrin-like
mm39_v1_chr11_+_117223161_117223174	1.23934	Sox2	ENSMUST00000106349.2|Septin9|ENSMUSG00000059248.14|septin 9
mm39_v1_chr6_+_65019793_65019862	1.23086	Sox2	ENSMUST00000204696.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr19_-_4384029_4384059	1.23079	Sox2	ENSMUST00000176653.2|Kdm2a|ENSMUSG00000054611.18|lysine (K)-specific demethylase 2A
mm39_v1_chr14_+_76082533_76082570	1.23045	Sox2	ENSMUST00000110894.9|Tpt1|ENSMUSG00000060126.15|tumor protein, translationally-controlled 1
mm39_v1_chr7_-_107696793_107696793	1.22447	Sox2	ENSMUST00000217304.2|Olfr482|ENSMUSG00000059031.4|olfactory receptor 482
mm39_v1_chr7_+_140547941_140547959	1.22353	Sox2	ENSMUST00000106040.8|Ifitm1|ENSMUSG00000025491.15|interferon induced transmembrane protein 1	ENSMUST00000026564.9|Ifitm1|ENSMUSG00000025491.15|interferon induced transmembrane protein 1
mm39_v1_chr14_+_30741082_30741114	1.22342	Sox2	ENSMUST00000112098.11|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112095.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112106.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000146325.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chr5_+_114142842_114142870	1.22333	Sox2	ENSMUST00000161610.6|Dao|ENSMUSG00000042096.16|D-amino acid oxidase
mm39_v1_chr13_-_43632368_43632395	1.2228	Sox2	ENSMUST00000222651.2|Ranbp9|ENSMUSG00000038546.10|RAN binding protein 9
mm39_v1_chr5_+_146168020_146168195	1.22272	Sox2	ENSMUST00000161181.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000161652.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000031640.15|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000159467.2|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8
mm39_v1_chr8_+_23247760_23247777	1.22222	Sox2	ENSMUST00000033941.7|Plat|ENSMUSG00000031538.7|plasminogen activator, tissue
mm39_v1_chr1_-_135302971_135302983	1.21653	Sox2	ENSMUST00000041240.4|Shisa4|ENSMUSG00000041889.8|shisa family member 4
mm39_v1_chr2_+_118730823_118730878	1.21601	Sox2	ENSMUST00000151162.2|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chr6_+_122490534_122490542	1.2139	Sox2	ENSMUST00000032210.14|Mfap5|ENSMUSG00000030116.15|microfibrillar associated protein 5	ENSMUST00000148517.8|Mfap5|ENSMUSG00000030116.15|microfibrillar associated protein 5
mm39_v1_chr7_+_75292971_75293067	1.21057	Sox2	ENSMUST00000207998.2|Akap13|ENSMUSG00000066406.17|A kinase (PRKA) anchor protein 13
mm39_v1_chr3_+_132797588_132797603	1.20967	Sox2	ENSMUST00000029650.9|Ints12|ENSMUSG00000028016.10|integrator complex subunit 12
mm39_v1_chr4_+_109092459_109092459	1.20804	Sox2	ENSMUST00000106631.9|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr9_+_109881083_109881181	1.19916	Sox2	ENSMUST00000164930.8|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4	ENSMUST00000199498.5|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr15_-_102630496_102630572	1.1987	Sox2	ENSMUST00000171838.2|Calcoco1|ENSMUSG00000023055.11|calcium binding and coiled coil domain 1
mm39_v1_chr16_-_19334384_19334384	1.19837	Sox2	ENSMUST00000054606.2|Olfr167|ENSMUSG00000045341.3|olfactory receptor 167
mm39_v1_chr5_-_38316706_38316798	1.19553	Sox2	ENSMUST00000201341.2|Nsg1|ENSMUSG00000029126.8|neuron specific gene family member 1	ENSMUST00000201363.4|Nsg1|ENSMUSG00000029126.8|neuron specific gene family member 1	ENSMUST00000201134.2|Nsg1|ENSMUSG00000029126.8|neuron specific gene family member 1
mm39_v1_chr2_-_181101158_181101232	1.19381	Sox2	ENSMUST00000155535.2|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000029106.13|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000087409.10|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46
mm39_v1_chr3_+_96739458_96739507	1.18902	Sox2	ENSMUST00000107070.8|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1	ENSMUST00000107069.8|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1
mm39_v1_chr5_-_142892457_142892509	1.18823	Sox2	ENSMUST00000167721.8|Actb|ENSMUSG00000029580.15|actin, beta	ENSMUST00000163829.2|Actb|ENSMUSG00000029580.15|actin, beta	ENSMUST00000100497.11|Actb|ENSMUSG00000029580.15|actin, beta
mm39_v1_chr7_+_19016536_19016628	1.18652	Sox2	ENSMUST00000032559.17|Rtn2|ENSMUSG00000030401.17|reticulon 2 (Z-band associated protein)
mm39_v1_chr3_+_88624145_88624190	1.18625	Sox2	ENSMUST00000029692.15|Rit1|ENSMUSG00000028057.15|Ras-like without CAAX 1	ENSMUST00000171645.8|Rit1|ENSMUSG00000028057.15|Ras-like without CAAX 1
mm39_v1_chr6_-_24168082_24168096	1.18351	Sox2	ENSMUST00000031713.9|Slc13a1|ENSMUSG00000029700.12|solute carrier family 13 (sodium/sulfate symporters), member 1
mm39_v1_chr11_-_115590133_115590150	1.18257	Sox2	ENSMUST00000106499.8|Grb2|ENSMUSG00000059923.14|growth factor receptor bound protein 2
mm39_v1_chr10_-_30531832_30531863	1.18032	Sox2	ENSMUST00000217138.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7	ENSMUST00000217644.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7	ENSMUST00000216172.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chrX_-_23231245_23231329	1.17588	Sox2	ENSMUST00000115313.8|Klhl13|ENSMUSG00000036782.14|kelch-like 13
mm39_v1_chr4_-_129590609_129590636	1.16574	Sox2	ENSMUST00000102588.10|Tmem39b|ENSMUSG00000053730.16|transmembrane protein 39b
mm39_v1_chr13_-_6686686_6686722	1.15487	Sox2	ENSMUST00000136585.2|Pfkp|ENSMUSG00000021196.15|phosphofructokinase, platelet
mm39_v1_chr7_+_140547134_140547280	1.14984	Sox2	ENSMUST00000106042.9|Ifitm1|ENSMUSG00000025491.15|interferon induced transmembrane protein 1
mm39_v1_chr12_-_104718159_104718211	1.14701	Sox2	ENSMUST00000041987.7|Dicer1|ENSMUSG00000041415.11|dicer 1, ribonuclease type III
mm39_v1_chr9_-_109946447_109946513	1.14667	Sox2	ENSMUST00000111991.9|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000197182.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000198425.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000199529.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30	ENSMUST00000196171.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm39_v1_chr7_-_46558754_46558784	1.12779	Sox2	ENSMUST00000209538.2|Tsg101|ENSMUSG00000014402.16|tumor susceptibility gene 101
mm39_v1_chr4_+_155778767_155778833	1.12578	Sox2	ENSMUST00000099265.3|Fndc10|ENSMUSG00000074738.3|fibronectin type III domain containing 10
mm39_v1_chr17_-_46581697_46581737	1.1253	Sox2	ENSMUST00000224055.2|Tjap1|ENSMUSG00000012296.17|tight junction associated protein 1
mm39_v1_chr9_-_83028654_83028738	1.12403	Sox2	ENSMUST00000161796.9|Hmgn3|ENSMUSG00000066456.15|high mobility group nucleosomal binding domain 3	ENSMUST00000162246.9|Hmgn3|ENSMUSG00000066456.15|high mobility group nucleosomal binding domain 3
mm39_v1_chr11_+_69523754_69523832	1.12163	Sox2	ENSMUST00000018909.4|Fxr2|ENSMUSG00000018765.6|fragile X mental retardation, autosomal homolog 2
mm39_v1_chr11_-_68848271_68848311	1.11914	Sox2	ENSMUST00000108671.2|Arhgef15|ENSMUSG00000052921.14|Rho guanine nucleotide exchange factor (GEF) 15
mm39_v1_chr10_-_89270554_89270640	1.11632	Sox2	ENSMUST00000220071.2|Gas2l3|ENSMUSG00000074802.12|growth arrest-specific 2 like 3
mm39_v1_chr2_+_26899935_26900094	1.11608	Sox2	ENSMUST00000114005.9|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114004.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114006.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114007.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000133807.2|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1
mm39_v1_chr8_-_24928953_24929000	1.09742	Sox2	ENSMUST00000052622.6|Tcim|ENSMUSG00000056313.6|transcriptional and immune response regulator
mm39_v1_chr15_+_79543397_79543468	1.08567	Sox2	ENSMUST00000023064.9|Cby1|ENSMUSG00000022428.9|chibby family member 1, beta catenin antagonist
mm39_v1_chr6_+_83771985_83772016	1.08183	Sox2	ENSMUST00000113851.8|Nagk|ENSMUSG00000034744.14|N-acetylglucosamine kinase
mm39_v1_chr16_+_32096267_32096295	1.07358	Sox2	ENSMUST00000014218.15|Rnf168|ENSMUSG00000014074.18|ring finger protein 168	ENSMUST00000171474.2|Rnf168|ENSMUSG00000014074.18|ring finger protein 168
mm39_v1_chr17_+_68004247_68004271	1.07254	Sox2	ENSMUST00000035471.9|Lama1|ENSMUSG00000032796.9|laminin, alpha 1
mm39_v1_chr11_-_75329726_75329772	1.07053	Sox2	ENSMUST00000108437.8|Serpinf2|ENSMUSG00000038224.13|serine (or cysteine) peptidase inhibitor, clade F, member 2
mm39_v1_chr12_-_108801763_108801821	1.06885	Sox2	ENSMUST00000021693.4|Slc25a29|ENSMUSG00000021265.4|solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29
mm39_v1_chr4_-_88640691_88640722	1.06849	Sox2	ENSMUST00000094993.3|Klhl9|ENSMUSG00000070923.5|kelch-like 9
mm39_v1_chr6_-_138399896_138399997	1.06832	Sox2	ENSMUST00000161450.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3	ENSMUST00000163024.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3	ENSMUST00000162185.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr12_-_51876282_51876336	1.06784	Sox2	ENSMUST00000042052.9|Hectd1|ENSMUSG00000035247.17|HECT domain E3 ubiquitin protein ligase 1	ENSMUST00000179265.8|Hectd1|ENSMUSG00000035247.17|HECT domain E3 ubiquitin protein ligase 1
mm39_v1_chr3_+_122523219_122523384	1.06247	Sox2	ENSMUST00000200389.2|Pde5a|ENSMUSG00000053965.11|phosphodiesterase 5A, cGMP-specific
mm39_v1_chr4_-_41723129_41723179	1.05809	Sox2	ENSMUST00000171641.2|Dctn3|ENSMUSG00000028447.12|dynactin 3	ENSMUST00000030158.11|Dctn3|ENSMUSG00000028447.12|dynactin 3
mm39_v1_chr11_-_100504159_100504194	1.05738	Sox2	ENSMUST00000146840.3|Dnajc7|ENSMUSG00000014195.17|DnaJ heat shock protein family (Hsp40) member C7
mm39_v1_chr2_-_170248421_170248438	1.053	Sox2	ENSMUST00000154650.8|Bcas1|ENSMUSG00000013523.14|breast carcinoma amplified sequence 1
mm39_v1_chr4_-_123507494_123507544	1.04998	Sox2	ENSMUST00000238866.2|Macf1|ENSMUSG00000028649.22|microtubule-actin crosslinking factor 1
mm39_v1_chr11_-_115590318_115590360	1.04499	Sox2	ENSMUST00000106497.8|Grb2|ENSMUSG00000059923.14|growth factor receptor bound protein 2
mm39_v1_chr3_-_132797558_132797608	1.04066	Sox2	ENSMUST00000029651.11|Gstcd|ENSMUSG00000028018.16|glutathione S-transferase, C-terminal domain containing
mm39_v1_chr16_-_89940652_89940662	1.03807	Sox2	ENSMUST00000114124.9|Tiam1|ENSMUSG00000002489.17|T cell lymphoma invasion and metastasis 1
mm39_v1_chr3_+_109481223_109481306	1.03631	Sox2	ENSMUST00000106576.3|Vav3|ENSMUSG00000033721.17|vav 3 oncogene
mm39_v1_chr2_+_15531281_15531293	1.03622	Sox2	ENSMUST00000146205.3|Malrd1|ENSMUSG00000075520.6|MAM and LDL receptor class A domain containing 1
mm39_v1_chr11_-_52165682_52165724	1.03499	Sox2	ENSMUST00000238914.2|Tcf7|ENSMUSG00000000782.17|transcription factor 7, T cell specific
mm39_v1_chr6_-_38853097_38853167	1.03276	Sox2	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr1_-_37575313_37575317	1.02716	Sox2	ENSMUST00000042161.15|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr10_+_36850532_36850575	1.02456	Sox2	ENSMUST00000019911.14|Hdac2|ENSMUSG00000019777.17|histone deacetylase 2	ENSMUST00000105510.2|Hdac2|ENSMUSG00000019777.17|histone deacetylase 2
mm39_v1_chr19_+_5091365_5091444	1.02351	Sox2	ENSMUST00000116567.4|Brms1|ENSMUSG00000080268.5|breast cancer metastasis-suppressor 1	ENSMUST00000235918.2|Brms1|ENSMUSG00000080268.5|breast cancer metastasis-suppressor 1
mm39_v1_chr19_+_42040681_42040697	1.01777	Sox2	ENSMUST00000164518.4|4933411K16Rik|ENSMUSG00000090369.4|RIKEN cDNA 4933411K16 gene
mm39_v1_chr7_-_109559671_109559702	1.01635	Sox2	ENSMUST00000080437.13|Dennd5a|ENSMUSG00000035901.15|DENN/MADD domain containing 5A
mm39_v1_chr11_+_93935066_93935100	1.01182	Sox2	ENSMUST00000103168.10|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr14_-_72840373_72840471	1.0084	Sox2	ENSMUST00000162825.8|Fndc3a|ENSMUSG00000033487.15|fibronectin type III domain containing 3A
mm39_v1_chr12_-_26465253_26465303	1.0067	Sox2	ENSMUST00000020971.14|Rnf144a|ENSMUSG00000020642.14|ring finger protein 144A
mm39_v1_chr6_+_54658609_54658770	0.994479	Sox2	ENSMUST00000190641.7|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)	ENSMUST00000187701.2|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)
mm39_v1_chr6_-_69835868_69835916	0.993021	Sox2	ENSMUST00000103369.2|Igkv12-41|ENSMUSG00000095007.2|immunoglobulin kappa chain variable 12-41
mm39_v1_chr19_+_6413840_6413971	0.990615	Sox2	ENSMUST00000113488.8|Sf1|ENSMUSG00000024949.18|splicing factor 1	ENSMUST00000113487.8|Sf1|ENSMUSG00000024949.18|splicing factor 1
mm39_v1_chr9_-_19799300_19799300	0.989607	Sox2	ENSMUST00000079660.5|Olfr862|ENSMUSG00000063842.6|olfactory receptor 862
mm39_v1_chr5_-_137784943_137784977	0.976224	Sox2	ENSMUST00000132726.2|Mepce|ENSMUSG00000029726.17|methylphosphate capping enzyme
mm39_v1_chr2_-_51039112_51039127	0.97588	Sox2	ENSMUST00000154545.2|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3	ENSMUST00000017288.9|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3
mm39_v1_chr17_-_56769193_56769243	0.97098	Sox2	ENSMUST00000086828.10|Ptprs|ENSMUSG00000013236.18|protein tyrosine phosphatase, receptor type, S
mm39_v1_chr17_-_36015484_36015494	0.97096	Sox2	ENSMUST00000117301.8|Ddr1|ENSMUSG00000003534.18|discoidin domain receptor family, member 1
mm39_v1_chr15_-_58187556_58187575	0.966608	Sox2	ENSMUST00000022985.2|Klhl38|ENSMUSG00000022357.3|kelch-like 38
mm39_v1_chr1_+_58432629_58432639	0.965066	Sox2	ENSMUST00000186949.2|Bzw1|ENSMUSG00000051223.15|basic leucine zipper and W2 domains 1
mm39_v1_chr5_+_137348423_137348440	0.961942	Sox2	ENSMUST00000111055.9|Ephb4|ENSMUSG00000029710.16|Eph receptor B4
mm39_v1_chr15_-_102630589_102630613	0.961201	Sox2	ENSMUST00000023818.11|Calcoco1|ENSMUSG00000023055.11|calcium binding and coiled coil domain 1
mm39_v1_chr2_+_31135813_31135913	0.954099	Sox2	ENSMUST00000000199.8|Ncs1|ENSMUSG00000062661.7|neuronal calcium sensor 1
mm39_v1_chr8_-_85414220_85414248	0.953098	Sox2	ENSMUST00000238449.2|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	ENSMUST00000238687.2|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr10_-_81102740_81102770	0.946965	Sox2	ENSMUST00000046114.5|Mrpl54|ENSMUSG00000034932.5|mitochondrial ribosomal protein L54
mm39_v1_chr3_-_132797790_132797800	0.944838	Sox2	ENSMUST00000080583.6|Gstcd|ENSMUSG00000028018.16|glutathione S-transferase, C-terminal domain containing
mm39_v1_chr9_+_106331041_106331110	0.936445	Sox2	ENSMUST00000024260.14|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4	ENSMUST00000216379.2|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4	ENSMUST00000215656.2|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4	ENSMUST00000214252.2|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4
mm39_v1_chr2_-_167473892_167474015	0.933832	Sox2	ENSMUST00000060645.13|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000140216.2|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000151365.8|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1	ENSMUST00000109207.10|Ube2v1|ENSMUSG00000078923.11|ubiquitin-conjugating enzyme E2 variant 1
mm39_v1_chr3_-_127019496_127019608	0.926919	Sox2	ENSMUST00000182064.9|Ank2|ENSMUSG00000032826.20|ankyrin 2, brain	ENSMUST00000182452.8|Ank2|ENSMUSG00000032826.20|ankyrin 2, brain
mm39_v1_chr2_+_92014606_92014674	0.925907	Sox2	ENSMUST00000162146.8|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A	ENSMUST00000111292.8|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A	ENSMUST00000162497.8|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A
mm39_v1_chr5_-_136227760_136227824	0.924925	Sox2	ENSMUST00000149151.2|Prkrip1|ENSMUSG00000039737.12|Prkr interacting protein 1 (IL11 inducible)	ENSMUST00000151786.8|Prkrip1|ENSMUSG00000039737.12|Prkr interacting protein 1 (IL11 inducible)
mm39_v1_chr15_-_42540363_42540376	0.92368	Sox2	ENSMUST00000022921.7|Angpt1|ENSMUSG00000022309.10|angiopoietin 1
mm39_v1_chr12_-_110662677_110662700	0.922636	Sox2	ENSMUST00000124156.8|Hsp90aa1|ENSMUSG00000021270.14|heat shock protein 90, alpha (cytosolic), class A member 1
mm39_v1_chr12_-_26465130_26465215	0.919124	Sox2	ENSMUST00000222082.2|Rnf144a|ENSMUSG00000020642.14|ring finger protein 144A	ENSMUST00000062149.6|Rnf144a|ENSMUSG00000020642.14|ring finger protein 144A
mm39_v1_chr2_+_29968596_29968596	0.918303	Sox2	ENSMUST00000045246.8|Pkn3|ENSMUSG00000026785.15|protein kinase N3
mm39_v1_chr18_+_37888770_37888819	0.917094	Sox2	ENSMUST00000061279.10|Pcdhga11|ENSMUSG00000102742.2|protocadherin gamma subfamily A, 11
mm39_v1_chr5_-_90487583_90487617	0.908137	Sox2	ENSMUST00000197021.2|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17
mm39_v1_chr12_+_3415107_3415142	0.90518	Sox2	ENSMUST00000220210.2|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr15_+_100052260_100052292	0.899414	Sox2	ENSMUST00000023768.14|Dip2b|ENSMUSG00000023026.17|disco interacting protein 2 homolog B
mm39_v1_chr11_+_46295547_46295562	0.89363	Sox2	ENSMUST00000063166.6|Fam71b|ENSMUSG00000020401.7|family with sequence similarity 71, member B
mm39_v1_chr11_-_88608920_88608931	0.892797	Sox2	ENSMUST00000092794.12|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr4_+_59626185_59626262	0.892433	Sox2	ENSMUST00000070150.11|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene	ENSMUST00000052420.7|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene
mm39_v1_chr4_-_58499398_58499409	0.891938	Sox2	ENSMUST00000107570.2|Lpar1|ENSMUSG00000038668.15|lysophosphatidic acid receptor 1
mm39_v1_chr9_-_108338111_108338275	0.891689	Sox2	ENSMUST00000193895.6|Klhdc8b|ENSMUSG00000032609.13|kelch domain containing 8B
mm39_v1_chr9_-_44646487_44646510	0.877886	Sox2	ENSMUST00000034611.15|Phldb1|ENSMUSG00000048537.17|pleckstrin homology like domain, family B, member 1
mm39_v1_chrX_-_104972938_104972988	0.877083	Sox2	ENSMUST00000198448.5|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000199233.5|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000134507.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000154866.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000128968.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000134381.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000150914.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr5_+_34494272_34494282	0.87701	Sox2	ENSMUST00000182047.2|Rnf4|ENSMUSG00000029110.14|ring finger protein 4
mm39_v1_chr10_-_130230201_130230201	0.873978	Sox2	ENSMUST00000094502.6|Vmn2r84|ENSMUSG00000070601.6|vomeronasal 2, receptor 84	ENSMUST00000233146.2|Vmn2r84|ENSMUSG00000070601.6|vomeronasal 2, receptor 84
mm39_v1_chr16_-_20244631_20244736	0.873328	Sox2	ENSMUST00000077867.10|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm39_v1_chr2_+_49341498_49341571	0.869184	Sox2	ENSMUST00000092123.11|Epc2|ENSMUSG00000069495.13|enhancer of polycomb homolog 2
mm39_v1_chr14_+_27598021_27598061	0.865646	Sox2	ENSMUST00000211684.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000210924.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr5_-_142803405_142803422	0.864474	Sox2	ENSMUST00000151477.8|Tnrc18|ENSMUSG00000039477.17|trinucleotide repeat containing 18
mm39_v1_chr18_+_74401322_74401448	0.86359	Sox2	ENSMUST00000224047.2|Mbd1|ENSMUSG00000024561.12|methyl-CpG binding domain protein 1
mm39_v1_chr4_-_129517662_129517740	0.860594	Sox2	ENSMUST00000106035.8|Ccdc28b|ENSMUSG00000028795.16|coiled coil domain containing 28B	ENSMUST00000150357.2|Ccdc28b|ENSMUSG00000028795.16|coiled coil domain containing 28B	ENSMUST00000030586.15|Ccdc28b|ENSMUSG00000028795.16|coiled coil domain containing 28B
mm39_v1_chr7_-_109559593_109559644	0.85464	Sox2	ENSMUST00000106722.2|Dennd5a|ENSMUSG00000035901.15|DENN/MADD domain containing 5A
mm39_v1_chr14_+_61836944_61836997	0.853741	Sox2	ENSMUST00000039562.8|Trim13|ENSMUSG00000035235.14|tripartite motif-containing 13
mm39_v1_chr5_+_21850975_21851074	0.850386	Sox2	ENSMUST00000095495.3|Armc10|ENSMUSG00000038525.17|armadillo repeat containing 10
mm39_v1_chr10_-_94780695_94780724	0.848945	Sox2	ENSMUST00000099337.5|Plxnc1|ENSMUSG00000074785.6|plexin C1
mm39_v1_chr3_-_51468236_51468300	0.84861	Sox2	ENSMUST00000037141.9|Setd7|ENSMUSG00000037111.10|SET domain containing (lysine methyltransferase) 7
mm39_v1_chr5_+_141842446_141842542	0.848501	Sox2	ENSMUST00000074546.7|Sdk1|ENSMUSG00000039683.17|sidekick cell adhesion molecule 1
mm39_v1_chr7_+_4928784_4928867	0.848093	Sox2	ENSMUST00000057612.9|Ssc5d|ENSMUSG00000035279.9|scavenger receptor cysteine rich family, 5 domains
mm39_v1_chr1_-_181841969_181842044	0.841949	Sox2	ENSMUST00000193074.6|Enah|ENSMUSG00000022995.17|ENAH actin regulator
mm39_v1_chr9_+_69305180_69305210	0.840027	Sox2	ENSMUST00000034761.15|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2	ENSMUST00000125938.2|Ice2|ENSMUSG00000032235.16|interactor of little elongation complex ELL subunit 2
mm39_v1_chr3_-_58792633_58792775	0.838844	Sox2	ENSMUST00000055636.13|Clrn1|ENSMUSG00000043850.16|clarin 1	ENSMUST00000072551.7|Clrn1|ENSMUSG00000043850.16|clarin 1	ENSMUST00000051408.8|Clrn1|ENSMUSG00000043850.16|clarin 1
mm39_v1_chr11_+_62441992_62442018	0.832748	Sox2	ENSMUST00000019649.4|Ubb|ENSMUSG00000019505.8|ubiquitin B
mm39_v1_chr12_-_81827893_81827949	0.829879	Sox2	ENSMUST00000035987.9|Map3k9|ENSMUSG00000042724.9|mitogen-activated protein kinase kinase kinase 9
mm39_v1_chr10_-_23112973_23113122	0.827115	Sox2	ENSMUST00000218049.2|Eya4|ENSMUSG00000010461.17|EYA transcriptional coactivator and phosphatase 4
mm39_v1_chr10_+_69048914_69049058	0.821888	Sox2	ENSMUST00000163497.8|Rhobtb1|ENSMUSG00000019944.15|Rho-related BTB domain containing 1	ENSMUST00000164212.8|Rhobtb1|ENSMUSG00000019944.15|Rho-related BTB domain containing 1	ENSMUST00000067908.14|Rhobtb1|ENSMUSG00000019944.15|Rho-related BTB domain containing 1
mm39_v1_chr2_+_3285269_3285327	0.818703	Sox2	ENSMUST00000102989.10|Nmt2|ENSMUSG00000026643.17|N-myristoyltransferase 2	ENSMUST00000091504.5|Nmt2|ENSMUSG00000026643.17|N-myristoyltransferase 2
mm39_v1_chr5_-_52347826_52347869	0.817104	Sox2	ENSMUST00000199321.5|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15	ENSMUST00000195922.2|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15	ENSMUST00000031061.12|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm39_v1_chr1_+_66403774_66403822	0.812458	Sox2	ENSMUST00000077355.12|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2	ENSMUST00000114012.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr9_+_120321557_120321578	0.805859	Sox2	ENSMUST00000007139.6|Eif1b|ENSMUSG00000006941.6|eukaryotic translation initiation factor 1B
mm39_v1_chr11_-_97913420_97913496	0.798481	Sox2	ENSMUST00000103144.10|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000017552.13|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000092736.11|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000107562.2|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit
mm39_v1_chr7_-_26895561_26895696	0.793923	Sox2	ENSMUST00000122202.8|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A	ENSMUST00000080356.10|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A
mm39_v1_chr6_+_83771953_83771971	0.793432	Sox2	ENSMUST00000037376.14|Nagk|ENSMUSG00000034744.14|N-acetylglucosamine kinase
mm39_v1_chr4_+_155924132_155924141	0.792718	Sox2	ENSMUST00000141883.8|Mxra8|ENSMUSG00000029070.10|matrix-remodelling associated 8
mm39_v1_chr6_+_17749169_17749266	0.790644	Sox2	ENSMUST00000053148.14|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7	ENSMUST00000115417.4|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7
mm39_v1_chr9_+_109961079_109961170	0.786382	Sox2	ENSMUST00000197480.5|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	ENSMUST00000197984.5|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	ENSMUST00000199896.2|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm39_v1_chr11_-_117859997_117860018	0.784043	Sox2	ENSMUST00000054002.4|Socs3|ENSMUSG00000053113.4|suppressor of cytokine signaling 3
mm39_v1_chr15_-_98769056_98769085	0.781562	Sox2	ENSMUST00000178486.9|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D	ENSMUST00000023741.16|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D
mm39_v1_chr12_-_69728572_69728632	0.781182	Sox2	ENSMUST00000183277.8|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2	ENSMUST00000035773.14|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2
mm39_v1_chr6_+_51447490_51447510	0.779975	Sox2	ENSMUST00000031862.14|Cbx3|ENSMUSG00000029836.16|chromobox 3
mm39_v1_chr19_+_8931187_8931221	0.77912	Sox2	ENSMUST00000096239.7|Tut1|ENSMUSG00000071645.7|terminal uridylyl transferase 1, U6 snRNA-specific
mm39_v1_chr10_+_43354807_43354859	0.778228	Sox2	ENSMUST00000167488.9|Bend3|ENSMUSG00000038214.16|BEN domain containing 3
mm39_v1_chr15_-_98380567_98380602	0.773949	Sox2	ENSMUST00000023726.5|Lalba|ENSMUSG00000022991.6|lactalbumin, alpha
mm39_v1_chrX_-_58211440_58211524	0.773591	Sox2	ENSMUST00000119306.2|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13
mm39_v1_chr17_-_56783462_56783483	0.771261	Sox2	ENSMUST00000067538.6|Ptprs|ENSMUSG00000013236.18|protein tyrosine phosphatase, receptor type, S
mm39_v1_chr15_-_76809607_76809648	0.771212	Sox2	ENSMUST00000229865.2|Zfp647|ENSMUSG00000054967.8|zinc finger protein 647	ENSMUST00000229055.2|Zfp647|ENSMUSG00000054967.8|zinc finger protein 647
mm39_v1_chr2_-_27365633_27365710	0.770182	Sox2	ENSMUST00000138693.8|Brd3|ENSMUSG00000026918.17|bromodomain containing 3	ENSMUST00000113941.9|Brd3|ENSMUSG00000026918.17|bromodomain containing 3	ENSMUST00000077737.13|Brd3|ENSMUSG00000026918.17|bromodomain containing 3
mm39_v1_chr2_+_90817948_90818091	0.769465	Sox2	ENSMUST00000111452.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111455.9|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr17_+_28259749_28259806	0.766795	Sox2	ENSMUST00000233869.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1
mm39_v1_chr13_-_22219738_22219774	0.765236	Sox2	ENSMUST00000091742.6|H2ac12|ENSMUSG00000069302.6|H2A clustered histone 12
mm39_v1_chr2_+_156563284_156563412	0.764987	Sox2	ENSMUST00000099145.6|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4
mm39_v1_chr9_-_44632680_44632781	0.763956	Sox2	ENSMUST00000148929.2|Phldb1|ENSMUSG00000048537.17|pleckstrin homology like domain, family B, member 1	ENSMUST00000123406.8|Phldb1|ENSMUSG00000048537.17|pleckstrin homology like domain, family B, member 1
mm39_v1_chr8_-_105169621_105169679	0.763816	Sox2	ENSMUST00000041769.8|Dync1li2|ENSMUSG00000035770.9|dynein, cytoplasmic 1 light intermediate chain 2
mm39_v1_chr3_+_88439616_88439703	0.761457	Sox2	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
mm39_v1_chr2_+_119505543_119505589	0.755391	Sox2	ENSMUST00000028767.9|Rtf1|ENSMUSG00000027304.10|RTF1, Paf1/RNA polymerase II complex component
mm39_v1_chr4_-_129590372_129590413	0.753504	Sox2	ENSMUST00000137640.3|Tmem39b|ENSMUSG00000053730.16|transmembrane protein 39b
mm39_v1_chr13_-_78344492_78344561	0.752304	Sox2	ENSMUST00000125176.3|Nr2f1|ENSMUSG00000069171.15|nuclear receptor subfamily 2, group F, member 1
mm39_v1_chr3_-_9898713_9898739	0.749107	Sox2	ENSMUST00000161949.8|Pag1|ENSMUSG00000027508.16|phosphoprotein associated with glycosphingolipid microdomains 1
mm39_v1_chr4_-_99008999_99009088	0.745417	Sox2	ENSMUST00000127417.3|Dock7|ENSMUSG00000028556.16|dedicator of cytokinesis 7	ENSMUST00000075836.12|Dock7|ENSMUSG00000028556.16|dedicator of cytokinesis 7	ENSMUST00000205650.2|Dock7|ENSMUSG00000028556.16|dedicator of cytokinesis 7
mm39_v1_chr14_+_60502629_60502793	0.742859	Sox2	ENSMUST00000022563.9|Mtmr6|ENSMUSG00000021987.10|myotubularin related protein 6	ENSMUST00000224366.2|Mtmr6|ENSMUSG00000021987.10|myotubularin related protein 6
mm39_v1_chr8_-_40095661_40095688	0.741791	Sox2	ENSMUST00000026021.14|Msr1|ENSMUSG00000025044.17|macrophage scavenger receptor 1
mm39_v1_chr3_-_98364359_98364442	0.738484	Sox2	ENSMUST00000188356.3|Gm4450|ENSMUSG00000090817.8|predicted gene 4450	ENSMUST00000167753.8|Gm4450|ENSMUSG00000090817.8|predicted gene 4450
mm39_v1_chr3_-_143908111_143908157	0.736209	Sox2	ENSMUST00000121796.8|Lmo4|ENSMUSG00000028266.18|LIM domain only 4
mm39_v1_chr16_+_51852435_51852580	0.73558	Sox2	ENSMUST00000227879.2|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr8_-_36716445_36716670	0.734637	Sox2	ENSMUST00000239119.2|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1	ENSMUST00000065297.6|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1
mm39_v1_chr7_-_37472979_37473066	0.733128	Sox2	ENSMUST00000176534.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr7_-_4517367_4517482	0.727	Sox2	ENSMUST00000166161.8|Tnnt1|ENSMUSG00000064179.14|troponin T1, skeletal, slow
mm39_v1_chr12_+_33197776_33197819	0.725344	Sox2	ENSMUST00000125192.9|Atxn7l1|ENSMUSG00000020564.18|ataxin 7-like 1	ENSMUST00000136644.8|Atxn7l1|ENSMUSG00000020564.18|ataxin 7-like 1
mm39_v1_chr6_-_38852857_38852871	0.721174	Sox2	ENSMUST00000162359.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr2_-_130681603_130681616	0.714204	Sox2	ENSMUST00000119422.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr5_-_140368482_140368494	0.714161	Sox2	ENSMUST00000196566.5|Snx8|ENSMUSG00000029560.13|sorting nexin 8
mm39_v1_chr17_+_33212097_33212135	0.71312	Sox2	ENSMUST00000141815.3|Zfp952|ENSMUSG00000053390.17|zinc finger protein 952
mm39_v1_chr3_+_60408678_60408699	0.711909	Sox2	ENSMUST00000191747.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000194069.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr1_-_54233207_54233207	0.711823	Sox2	ENSMUST00000120904.8|Hecw2|ENSMUSG00000042807.16|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr11_+_119205613_119205685	0.709389	Sox2	ENSMUST00000053245.7|Card14|ENSMUSG00000013483.15|caspase recruitment domain family, member 14
mm39_v1_chr1_-_171854818_171854880	0.706937	Sox2	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr10_+_128295107_128295118	0.694811	Sox2	ENSMUST00000218228.2|Smarcc2|ENSMUSG00000025369.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm39_v1_chr7_+_45199297_45199323	0.688752	Sox2	ENSMUST00000211348.2|Plekha4|ENSMUSG00000040428.20|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
mm39_v1_chr19_-_10217968_10218125	0.688728	Sox2	ENSMUST00000189897.2|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000186056.7|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000088013.12|Myrf|ENSMUSG00000036098.16|myelin regulatory factor
mm39_v1_chr7_-_85065128_85065128	0.686185	Sox2	ENSMUST00000171213.3|Vmn2r69|ENSMUSG00000091006.4|vomeronasal 2, receptor 69	ENSMUST00000233336.2|Vmn2r69|ENSMUSG00000091006.4|vomeronasal 2, receptor 69
mm39_v1_chr10_-_18887701_18887726	0.68607	Sox2	ENSMUST00000105527.2|Tnfaip3|ENSMUSG00000019850.12|tumor necrosis factor, alpha-induced protein 3
mm39_v1_chr13_+_16189041_16189060	0.67964	Sox2	ENSMUST00000164993.2|Inhba|ENSMUSG00000041324.15|inhibin beta-A
mm39_v1_chr4_-_126861918_126861947	0.679429	Sox2	ENSMUST00000106108.9|Zmym4|ENSMUSG00000042446.17|zinc finger, MYM-type 4
mm39_v1_chr18_+_52901066_52901228	0.675364	Sox2	ENSMUST00000025413.14|Sncaip|ENSMUSG00000024534.16|synuclein, alpha interacting protein (synphilin)	ENSMUST00000163742.9|Sncaip|ENSMUSG00000024534.16|synuclein, alpha interacting protein (synphilin)	ENSMUST00000178011.8|Sncaip|ENSMUSG00000024534.16|synuclein, alpha interacting protein (synphilin)
mm39_v1_chr5_+_117495337_117495421	0.674026	Sox2	ENSMUST00000031309.16|Wsb2|ENSMUSG00000029364.16|WD repeat and SOCS box-containing 2
mm39_v1_chr6_-_23650205_23650271	0.673014	Sox2	ENSMUST00000115354.2|Rnf133|ENSMUSG00000051956.5|ring finger protein 133
mm39_v1_chr2_-_118310116_118310192	0.67082	Sox2	ENSMUST00000110862.2|Srp14|ENSMUSG00000009549.15|signal recognition particle 14	ENSMUST00000009693.15|Srp14|ENSMUSG00000009549.15|signal recognition particle 14
mm39_v1_chr9_+_3335135_3335161	0.669143	Sox2	ENSMUST00000212294.2|Alkbh8|ENSMUSG00000025899.15|alkB homolog 8, tRNA methyltransferase
mm39_v1_chr9_+_109961048_109961067	0.665939	Sox2	ENSMUST00000088716.12|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm39_v1_chr1_-_136273811_136273884	0.658317	Sox2	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr9_+_65583852_65583876	0.657477	Sox2	ENSMUST00000136166.3|Oaz2|ENSMUSG00000040652.17|ornithine decarboxylase antizyme 2
mm39_v1_chr16_-_4377640_4377718	0.650318	Sox2	ENSMUST00000005862.9|Tfap4|ENSMUSG00000005718.9|transcription factor AP4
mm39_v1_chr3_+_31956656_31956808	0.648579	Sox2	ENSMUST00000119310.8|Kcnmb2|ENSMUSG00000037610.16|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm39_v1_chr13_+_93441447_93441786	0.643549	Sox2	ENSMUST00000109497.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109498.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000060490.11|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109492.9|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109496.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109495.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr11_+_105072619_105072808	0.642581	Sox2	ENSMUST00000092537.10|Tlk2|ENSMUSG00000020694.18|tousled-like kinase 2 (Arabidopsis)	ENSMUST00000015107.13|Tlk2|ENSMUSG00000020694.18|tousled-like kinase 2 (Arabidopsis)	ENSMUST00000145048.8|Tlk2|ENSMUSG00000020694.18|tousled-like kinase 2 (Arabidopsis)
mm39_v1_chr6_+_106095726_106095967	0.637439	Sox2	ENSMUST00000113258.8|Cntn4|ENSMUSG00000064293.15|contactin 4	ENSMUST00000079416.6|Cntn4|ENSMUSG00000064293.15|contactin 4
mm39_v1_chr19_+_40819682_40819757	0.631505	Sox2	ENSMUST00000025983.13|Ccnj|ENSMUSG00000025010.15|cyclin J	ENSMUST00000119316.2|Ccnj|ENSMUSG00000025010.15|cyclin J
mm39_v1_chr2_-_20973692_20973768	0.630752	Sox2	ENSMUST00000114594.8|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr14_+_26359191_26359229	0.627287	Sox2	ENSMUST00000022429.9|Arf4|ENSMUSG00000021877.13|ADP-ribosylation factor 4
mm39_v1_chr8_-_106363982_106364025	0.625313	Sox2	ENSMUST00000182863.2|Gm5914|ENSMUSG00000098120.2|predicted gene 5914	ENSMUST00000194091.6|Agrp|ENSMUSG00000005705.11|agouti related neuropeptide
mm39_v1_chr5_-_105258142_105258142	0.625009	Sox2	ENSMUST00000031238.13|Gbp9|ENSMUSG00000029298.16|guanylate-binding protein 9
mm39_v1_chr19_-_46384158_46384199	0.624918	Sox2	ENSMUST00000237742.2|Actr1a|ENSMUSG00000025228.6|ARP1 actin-related protein 1A, centractin alpha	ENSMUST00000040270.6|Actr1a|ENSMUSG00000025228.6|ARP1 actin-related protein 1A, centractin alpha
mm39_v1_chr7_-_3828640_3828686	0.624525	Sox2	ENSMUST00000189095.7|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000094911.5|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000153846.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000108619.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000108620.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448
mm39_v1_chr16_-_97564910_97564987	0.617566	Sox2	ENSMUST00000019386.10|Ripk4|ENSMUSG00000005251.16|receptor-interacting serine-threonine kinase 4
mm39_v1_chr15_+_98532624_98532659	0.617101	Sox2	ENSMUST00000003442.9|Cacnb3|ENSMUSG00000003352.15|calcium channel, voltage-dependent, beta 3 subunit
mm39_v1_chr11_-_31320065_31320081	0.608175	Sox2	ENSMUST00000020546.3|Stc2|ENSMUSG00000020303.3|stanniocalcin 2
mm39_v1_chr15_+_98532866_98532986	0.60738	Sox2	ENSMUST00000230490.2|Cacnb3|ENSMUSG00000003352.15|calcium channel, voltage-dependent, beta 3 subunit
mm39_v1_chr1_+_88998115_88998147	0.604752	Sox2	ENSMUST00000066279.11|Sh3bp4|ENSMUSG00000036206.13|SH3-domain binding protein 4
mm39_v1_chr4_-_129015682_129015856	0.603156	Sox2	ENSMUST00000139450.8|Hpca|ENSMUSG00000028785.14|hippocalcin	ENSMUST00000125931.9|Hpca|ENSMUSG00000028785.14|hippocalcin	ENSMUST00000116444.10|Hpca|ENSMUSG00000028785.14|hippocalcin
mm39_v1_chr2_+_89821565_89821582	0.603102	Sox2	ENSMUST00000111509.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261	ENSMUST00000213909.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261
mm39_v1_chr17_-_32503060_32503092	0.602854	Sox2	ENSMUST00000003726.16|Brd4|ENSMUSG00000024002.19|bromodomain containing 4	ENSMUST00000121285.8|Brd4|ENSMUSG00000024002.19|bromodomain containing 4	ENSMUST00000120276.9|Brd4|ENSMUSG00000024002.19|bromodomain containing 4
mm39_v1_chr15_-_37008011_37008033	0.602128	Sox2	ENSMUST00000226671.2|Zfp706|ENSMUSG00000062397.9|zinc finger protein 706
mm39_v1_chr7_+_126359763_126359771	0.598621	Sox2	ENSMUST00000091328.4|Mapk3|ENSMUSG00000063065.14|mitogen-activated protein kinase 3
mm39_v1_chr2_+_85715984_85715984	0.597142	Sox2	ENSMUST00000213441.3|Olfr1023|ENSMUSG00000050128.6|olfactory receptor 1023
mm39_v1_chr2_+_31840340_31840350	0.596248	Sox2	ENSMUST00000148056.4|Aif1l|ENSMUSG00000001864.14|allograft inflammatory factor 1-like
mm39_v1_chr3_-_143908060_143908108	0.59138	Sox2	ENSMUST00000121112.6|Lmo4|ENSMUSG00000028266.18|LIM domain only 4
mm39_v1_chr18_-_15536747_15536815	0.591344	Sox2	ENSMUST00000079081.8|Aqp4|ENSMUSG00000024411.12|aquaporin 4
mm39_v1_chr9_-_109946398_109946414	0.59134	Sox2	ENSMUST00000200066.5|Dhx30|ENSMUSG00000032480.18|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm39_v1_chr6_+_86381318_86381362	0.587711	Sox2	ENSMUST00000113713.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr18_+_37858753_37858810	0.580243	Sox2	ENSMUST00000066149.9|Pcdhga8|ENSMUSG00000103897.2|protocadherin gamma subfamily A, 8
mm39_v1_chr1_-_33853598_33853655	0.57999	Sox2	ENSMUST00000019861.13|Zfp451|ENSMUSG00000042197.14|zinc finger protein 451	ENSMUST00000044455.8|Zfp451|ENSMUSG00000042197.14|zinc finger protein 451
mm39_v1_chr4_+_83335947_83335995	0.571565	Sox2	ENSMUST00000030206.10|Snapc3|ENSMUSG00000028483.14|small nuclear RNA activating complex, polypeptide 3	ENSMUST00000071544.11|Snapc3|ENSMUSG00000028483.14|small nuclear RNA activating complex, polypeptide 3
mm39_v1_chr18_-_43526411_43526447	0.567762	Sox2	ENSMUST00000025379.14|Dpysl3|ENSMUSG00000024501.21|dihydropyrimidinase-like 3
mm39_v1_chr1_+_155034452_155034522	0.566194	Sox2	ENSMUST00000027743.13|Stx6|ENSMUSG00000026470.15|syntaxin 6	ENSMUST00000195302.6|Stx6|ENSMUSG00000026470.15|syntaxin 6
mm39_v1_chr2_-_25873189_25873304	0.564817	Sox2	ENSMUST00000114167.9|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000091268.11|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000183461.8|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1
mm39_v1_chr7_+_120634834_120634885	0.564439	Sox2	ENSMUST00000207351.2|Mettl9|ENSMUSG00000030876.8|methyltransferase like 9
mm39_v1_chr17_-_80597495_80597614	0.560964	Sox2	ENSMUST00000086555.11|Dhx57|ENSMUSG00000035051.16|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm39_v1_chr4_+_136011969_136011996	0.55339	Sox2	ENSMUST00000144217.8|Zfp46|ENSMUSG00000051351.15|zinc finger protein 46
mm39_v1_chr13_+_19528728_19528728	0.552807	Sox2	ENSMUST00000179181.3|Trgc4|ENSMUSG00000076757.10|T cell receptor gamma, constant 4
mm39_v1_chr10_+_90412827_90412885	0.550453	Sox2	ENSMUST00000182550.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000099364.12|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr12_-_16850674_16850711	0.548412	Sox2	ENSMUST00000162112.8|Greb1|ENSMUSG00000036523.17|gene regulated by estrogen in breast cancer protein
mm39_v1_chr11_-_69451012_69451039	0.547532	Sox2	ENSMUST00000004036.6|Efnb3|ENSMUSG00000003934.6|ephrin B3
mm39_v1_chr14_+_51162425_51162463	0.544656	Sox2	ENSMUST00000049411.12|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1	ENSMUST00000136753.8|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1	ENSMUST00000154288.3|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1
mm39_v1_chr5_+_32616566_32616593	0.543162	Sox2	ENSMUST00000202078.2|Ppp1cb|ENSMUSG00000014956.16|protein phosphatase 1 catalytic subunit beta
mm39_v1_chr17_-_71158184_71158211	0.541647	Sox2	ENSMUST00000059775.15|Tgif1|ENSMUSG00000047407.18|TGFB-induced factor homeobox 1
mm39_v1_chr6_-_99643723_99643784	0.539835	Sox2	ENSMUST00000032151.3|Eif4e3|ENSMUSG00000093661.2|eukaryotic translation initiation factor 4E member 3
mm39_v1_chr12_-_72283465_72283498	0.537474	Sox2	ENSMUST00000021497.16|Rtn1|ENSMUSG00000021087.19|reticulon 1	ENSMUST00000137990.2|Rtn1|ENSMUSG00000021087.19|reticulon 1
mm39_v1_chr14_-_54647647_54647675	0.537057	Sox2	ENSMUST00000228488.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	ENSMUST00000195970.5|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr9_-_22218934_22218990	0.531718	Sox2	ENSMUST00000086278.7|Zfp810|ENSMUSG00000066829.8|zinc finger protein 810	ENSMUST00000215202.2|Zfp810|ENSMUSG00000066829.8|zinc finger protein 810
mm39_v1_chr17_-_33979442_33979504	0.528929	Sox2	ENSMUST00000057373.14|Rab11b|ENSMUSG00000077450.14|RAB11B, member RAS oncogene family
mm39_v1_chr1_+_172784335_172784335	0.526636	Sox2	ENSMUST00000038432.7|Olfr16|ENSMUSG00000037924.7|olfactory receptor 16
mm39_v1_chr19_+_47926086_47926151	0.526567	Sox2	ENSMUST00000238163.2|Cfap58|ENSMUSG00000046585.10|cilia and flagella associated protein 58	ENSMUST00000066308.9|Cfap58|ENSMUSG00000046585.10|cilia and flagella associated protein 58
mm39_v1_chr1_+_66426127_66426159	0.526431	Sox2	ENSMUST00000145419.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr10_+_115405891_115405927	0.524932	Sox2	ENSMUST00000173620.2|A930009A15Rik|ENSMUSG00000092210.2|RIKEN cDNA A930009A15 gene
mm39_v1_chr13_+_22220000_22220040	0.522315	Sox2	ENSMUST00000110455.4|H2bc12|ENSMUSG00000062727.5|H2B clustered histone 12
mm39_v1_chr11_+_87959067_87959115	0.520612	Sox2	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chr17_-_32503107_32503137	0.518748	Sox2	ENSMUST00000237692.2|Brd4|ENSMUSG00000024002.19|bromodomain containing 4
mm39_v1_chr14_+_69266566_69266687	0.518034	Sox2	ENSMUST00000014957.10|Stc1|ENSMUSG00000014813.10|stanniocalcin 1
mm39_v1_chr6_-_100264439_100264461	0.516489	Sox2	ENSMUST00000101118.4|Rybp|ENSMUSG00000072872.4|RING1 and YY1 binding protein
mm39_v1_chr16_+_11223512_11223577	0.515378	Sox2	ENSMUST00000096273.9|Snx29|ENSMUSG00000071669.15|sorting nexin 29
mm39_v1_chr14_-_28691423_28691432	0.506184	Sox2	ENSMUST00000225985.2|Cacna2d3|ENSMUSG00000021991.10|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm39_v1_chr8_+_70354828_70354844	0.502373	Sox2	ENSMUST00000050373.7|Tssk6|ENSMUSG00000047654.7|testis-specific serine kinase 6
mm39_v1_chr10_+_26105605_26105661	0.501661	Sox2	ENSMUST00000218301.2|Samd3|ENSMUSG00000051354.15|sterile alpha motif domain containing 3	ENSMUST00000164660.8|Samd3|ENSMUSG00000051354.15|sterile alpha motif domain containing 3	ENSMUST00000060716.6|Samd3|ENSMUSG00000051354.15|sterile alpha motif domain containing 3
mm39_v1_chr2_+_25293140_25293212	0.498409	Sox2	ENSMUST00000154809.8|Npdc1|ENSMUSG00000015094.17|neural proliferation, differentiation and control 1	ENSMUST00000055921.14|Npdc1|ENSMUSG00000015094.17|neural proliferation, differentiation and control 1	ENSMUST00000141567.8|Npdc1|ENSMUSG00000015094.17|neural proliferation, differentiation and control 1
mm39_v1_chr7_+_107585900_107585900	0.49437	Sox2	ENSMUST00000214677.2|Olfr477|ENSMUSG00000096151.3|olfactory receptor 477
mm39_v1_chr10_-_60667349_60667368	0.492357	Sox2	ENSMUST00000077925.7|Unc5b|ENSMUSG00000020099.9|unc-5 netrin receptor B
mm39_v1_chr3_-_119576911_119577037	0.490824	Sox2	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr15_+_27466732_27466783	0.489359	Sox2	ENSMUST00000022875.7|Ank|ENSMUSG00000022265.8|progressive ankylosis
mm39_v1_chr11_+_93934940_93934947	0.488431	Sox2	ENSMUST00000132079.8|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr7_-_133943703_133943726	0.488363	Sox2	ENSMUST00000106129.9|D7Ertd443e|ENSMUSG00000030994.17|DNA segment, Chr 7, ERATO Doi 443, expressed
mm39_v1_chr4_+_152181155_152181176	0.487756	Sox2	ENSMUST00000105661.10|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	ENSMUST00000084115.4|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm39_v1_chr6_+_97968737_97968882	0.487179	Sox2	ENSMUST00000043628.13|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000203938.2|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr15_-_98277078_98277078	0.486915	Sox2	ENSMUST00000057386.6|Olfr283|ENSMUSG00000056184.6|olfactory receptor 283
mm39_v1_chr5_+_30218112_30218166	0.482858	Sox2	ENSMUST00000026845.12|Il6|ENSMUSG00000025746.12|interleukin 6	ENSMUST00000199183.5|Il6|ENSMUSG00000025746.12|interleukin 6	ENSMUST00000195978.5|Il6|ENSMUSG00000025746.12|interleukin 6
mm39_v1_chr5_+_88868714_88868734	0.481364	Sox2	ENSMUST00000113229.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B	ENSMUST00000006424.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B
mm39_v1_chr12_-_115832846_115832874	0.477956	Sox2	ENSMUST00000199373.2|Ighv1-78|ENSMUSG00000096326.3|immunoglobulin heavy variable 1-78
mm39_v1_chr10_-_4338032_4338108	0.475761	Sox2	ENSMUST00000100078.10|Zbtb2|ENSMUSG00000075327.11|zinc finger and BTB domain containing 2
mm39_v1_chr10_+_80015316_80015375	0.4671	Sox2	ENSMUST00000003154.7|Efna2|ENSMUSG00000003070.7|ephrin A2
mm39_v1_chr9_+_121196034_121196108	0.466829	Sox2	ENSMUST00000210636.2|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1	ENSMUST00000045903.8|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1
mm39_v1_chr11_-_115915315_115915337	0.465693	Sox2	ENSMUST00000016703.8|H3f3b|ENSMUSG00000016559.15|H3.3 histone B
mm39_v1_chr9_+_38841385_38841385	0.465302	Sox2	ENSMUST00000058789.7|Olfr930|ENSMUSG00000063221.7|olfactory receptor 930
mm39_v1_chr2_-_111104451_111104451	0.464859	Sox2	ENSMUST00000214760.2|Olfr1277|ENSMUSG00000074965.6|olfactory receptor 1277
mm39_v1_chr8_-_48166955_48166973	0.462318	Sox2	ENSMUST00000212175.2|Cdkn2aip|ENSMUSG00000038069.7|CDKN2A interacting protein	ENSMUST00000038738.7|Cdkn2aip|ENSMUSG00000038069.7|CDKN2A interacting protein
mm39_v1_chr9_-_75316625_75316668	0.460998	Sox2	ENSMUST00000168937.8|Mapk6|ENSMUSG00000042688.17|mitogen-activated protein kinase 6
mm39_v1_chr11_+_93935156_93935191	0.458612	Sox2	ENSMUST00000024979.15|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr19_-_29721012_29721012	0.4569	Sox2	ENSMUST00000175764.9|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr5_+_65920861_65920886	0.45389	Sox2	ENSMUST00000201489.4|N4bp2|ENSMUSG00000037795.15|NEDD4 binding protein 2
mm39_v1_chr5_-_137834444_137834463	0.449007	Sox2	ENSMUST00000197586.2|Pilra|ENSMUSG00000046245.14|paired immunoglobin-like type 2 receptor alpha
mm39_v1_chr1_+_182236728_182236750	0.447576	Sox2	ENSMUST00000117245.2|Trp53bp2|ENSMUSG00000026510.11|transformation related protein 53 binding protein 2
mm39_v1_chr11_-_99742434_99742458	0.441314	Sox2	ENSMUST00000107437.2|Krtap4-16|ENSMUSG00000046474.10|keratin associated protein 4-16
mm39_v1_chr8_-_76133212_76133221	0.43985	Sox2	ENSMUST00000212864.2|Gm10358|ENSMUSG00000110469.2|predicted gene 10358
mm39_v1_chr9_+_50679528_50679570	0.435762	Sox2	ENSMUST00000042391.13|Fdxacb1|ENSMUSG00000037845.15|ferredoxin-fold anticodon binding domain containing 1
mm39_v1_chr9_-_110474398_110474436	0.434216	Sox2	ENSMUST00000149089.2|Nbeal2|ENSMUSG00000056724.16|neurobeachin-like 2
mm39_v1_chr4_-_129556234_129556282	0.433294	Sox2	ENSMUST00000003828.11|Kpna6|ENSMUSG00000003731.14|karyopherin (importin) alpha 6
mm39_v1_chr18_+_37130860_37130933	0.430804	Sox2	ENSMUST00000115659.6|Pcdha9|ENSMUSG00000103770.2|protocadherin alpha 9
mm39_v1_chr12_+_8724129_8724150	0.429752	Sox2	ENSMUST00000111123.9|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000178015.8|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000020915.10|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2
mm39_v1_chr19_-_28657477_28657523	0.42948	Sox2	ENSMUST00000162022.8|Glis3|ENSMUSG00000052942.14|GLIS family zinc finger 3	ENSMUST00000112612.9|Glis3|ENSMUSG00000052942.14|GLIS family zinc finger 3
mm39_v1_chr6_-_87312681_87312706	0.42655	Sox2	ENSMUST00000204805.3|Antxr1|ENSMUSG00000033420.13|anthrax toxin receptor 1
mm39_v1_chr2_-_53081199_53081296	0.426269	Sox2	ENSMUST00000239398.2|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A	ENSMUST00000076313.14|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A	ENSMUST00000210789.3|Prpf40a|ENSMUSG00000061136.17|pre-mRNA processing factor 40A
mm39_v1_chr1_+_40619215_40619255	0.422076	Sox2	ENSMUST00000027233.9|Slc9a4|ENSMUSG00000026065.9|solute carrier family 9 (sodium/hydrogen exchanger), member 4
mm39_v1_chr6_-_129600798_129600809	0.420264	Sox2	ENSMUST00000095412.10|Klrk1|ENSMUSG00000030149.16|killer cell lectin-like receptor subfamily K, member 1
mm39_v1_chr12_-_116226565_116226665	0.419922	Sox2	ENSMUST00000039349.8|Dync2i1|ENSMUSG00000042050.9|dynein 2 intermediate chain 1
mm39_v1_chr14_+_102077937_102077991	0.417805	Sox2	ENSMUST00000159026.8|Lmo7|ENSMUSG00000033060.17|LIM domain only 7
mm39_v1_chr7_-_80475722_80475770	0.415086	Sox2	ENSMUST00000205304.2|Iqgap1|ENSMUSG00000030536.11|IQ motif containing GTPase activating protein 1
mm39_v1_chr6_-_137626207_137626298	0.413175	Sox2	ENSMUST00000134630.6|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000058210.13|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000111878.8|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8
mm39_v1_chr2_+_92015780_92015841	0.40628	Sox2	ENSMUST00000128781.9|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A	ENSMUST00000111291.9|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A
mm39_v1_chr6_+_122490635_122490647	0.405222	Sox2	ENSMUST00000142896.8|Mfap5|ENSMUSG00000030116.15|microfibrillar associated protein 5	ENSMUST00000121656.2|Mfap5|ENSMUSG00000030116.15|microfibrillar associated protein 5
mm39_v1_chr15_-_54141816_54141880	0.40453	Sox2	ENSMUST00000079772.4|Tnfrsf11b|ENSMUSG00000063727.4|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm39_v1_chr3_-_123483772_123483929	0.402834	Sox2	ENSMUST00000172537.3|Ndst3|ENSMUSG00000027977.16|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm39_v1_chr17_-_75858835_75858941	0.401312	Sox2	ENSMUST00000234785.2|Fam98a|ENSMUSG00000002017.11|family with sequence similarity 98, member A	ENSMUST00000112507.4|Fam98a|ENSMUSG00000002017.11|family with sequence similarity 98, member A
mm39_v1_chr16_+_17945471_17945513	0.400881	Sox2	ENSMUST00000059589.6|Rtn4r|ENSMUSG00000043811.6|reticulon 4 receptor
mm39_v1_chr15_-_98432111_98432186	0.397086	Sox2	ENSMUST00000116400.4|Kansl2|ENSMUSG00000022992.18|KAT8 regulatory NSL complex subunit 2	ENSMUST00000023727.17|Kansl2|ENSMUSG00000022992.18|KAT8 regulatory NSL complex subunit 2	ENSMUST00000230542.2|Kansl2|ENSMUSG00000022992.18|KAT8 regulatory NSL complex subunit 2
mm39_v1_chr10_-_130291919_130291919	0.395508	Sox2	ENSMUST00000170257.4|Vmn2r86|ENSMUSG00000092162.4|vomeronasal 2, receptor 86
mm39_v1_chr14_+_102078038_102078111	0.395324	Sox2	ENSMUST00000159314.8|Lmo7|ENSMUSG00000033060.17|LIM domain only 7
mm39_v1_chr9_+_108867633_108867714	0.394488	Sox2	ENSMUST00000112059.10|Shisa5|ENSMUSG00000025647.17|shisa family member 5	ENSMUST00000026737.12|Shisa5|ENSMUSG00000025647.17|shisa family member 5
mm39_v1_chr9_+_65583826_65583835	0.393627	Sox2	ENSMUST00000153700.9|Oaz2|ENSMUSG00000040652.17|ornithine decarboxylase antizyme 2	ENSMUST00000046490.14|Oaz2|ENSMUSG00000040652.17|ornithine decarboxylase antizyme 2
mm39_v1_chr2_-_179618439_179618458	0.393421	Sox2	ENSMUST00000041618.13|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4	ENSMUST00000227325.2|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4
mm39_v1_chr7_-_19192672_19192782	0.392346	Sox2	ENSMUST00000239292.2|Mark4|ENSMUSG00000030397.12|MAP/microtubule affinity regulating kinase 4	ENSMUST00000085715.7|Mark4|ENSMUSG00000030397.12|MAP/microtubule affinity regulating kinase 4
mm39_v1_chr16_-_4376471_4376647	0.39195	Sox2	ENSMUST00000230875.2|Tfap4|ENSMUSG00000005718.9|transcription factor AP4
mm39_v1_chr10_-_62363192_62363214	0.386665	Sox2	ENSMUST00000160643.8|Srgn|ENSMUSG00000020077.15|serglycin
mm39_v1_chr5_+_150183201_150183232	0.383829	Sox2	ENSMUST00000087204.9|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr7_-_10229249_10229328	0.383567	Sox2	ENSMUST00000032551.8|Zik1|ENSMUSG00000030393.9|zinc finger protein interacting with K protein 1
mm39_v1_chr2_-_6726417_6726440	0.3835	Sox2	ENSMUST00000142941.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000150624.9|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000100429.11|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000182879.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr6_+_83772136_83772223	0.383485	Sox2	ENSMUST00000113850.2|Nagk|ENSMUSG00000034744.14|N-acetylglucosamine kinase
mm39_v1_chr19_+_4264292_4264417	0.383463	Sox2	ENSMUST00000046506.7|Clcf1|ENSMUSG00000040663.10|cardiotrophin-like cytokine factor 1
mm39_v1_chr4_-_110149916_110149929	0.381444	Sox2	ENSMUST00000106601.8|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4
mm39_v1_chr17_+_13135216_13135290	0.380417	Sox2	ENSMUST00000089024.13|Tcp1|ENSMUSG00000068039.14|t-complex protein 1	ENSMUST00000151287.8|Tcp1|ENSMUSG00000068039.14|t-complex protein 1
mm39_v1_chrX_+_21350783_21350875	0.374318	Sox2	ENSMUST00000089188.9|Agtr2|ENSMUSG00000068122.11|angiotensin II receptor, type 2
mm39_v1_chr17_-_34337446_34337475	0.37304	Sox2	ENSMUST00000095347.13|Brd2|ENSMUSG00000024335.21|bromodomain containing 2
mm39_v1_chr18_+_37622518_37622518	0.371828	Sox2	ENSMUST00000055949.4|Pcdhb18|ENSMUSG00000048347.6|protocadherin beta 18
mm39_v1_chr12_-_100995102_100995180	0.371328	Sox2	ENSMUST00000223097.2|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chr6_+_29281134_29281147	0.36862	Sox2	ENSMUST00000115286.4|Fam71f2|ENSMUSG00000079652.9|family with sequence similarity 71, member F2
mm39_v1_chr18_+_37827413_37827444	0.366841	Sox2	ENSMUST00000193414.2|Pcdhga5|ENSMUSG00000103567.2|protocadherin gamma subfamily A, 5
mm39_v1_chr2_+_156562956_156562982	0.365865	Sox2	ENSMUST00000109566.9|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4	ENSMUST00000146412.9|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4	ENSMUST00000177013.8|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4	ENSMUST00000171030.9|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4
mm39_v1_chr9_+_69896748_69896821	0.365105	Sox2	ENSMUST00000034754.12|Bnip2|ENSMUSG00000011958.18|BCL2/adenovirus E1B interacting protein 2	ENSMUST00000085393.13|Bnip2|ENSMUSG00000011958.18|BCL2/adenovirus E1B interacting protein 2	ENSMUST00000117450.8|Bnip2|ENSMUSG00000011958.18|BCL2/adenovirus E1B interacting protein 2
mm39_v1_chr9_+_65121944_65121984	0.364541	Sox2	ENSMUST00000069000.9|Parp16|ENSMUSG00000032392.12|poly (ADP-ribose) polymerase family, member 16
mm39_v1_chr17_+_66090336_66090594	0.36236	Sox2	ENSMUST00000073104.11|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000160664.8|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000162272.2|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1
mm39_v1_chr2_-_45000389_45000766	0.361872	Sox2	ENSMUST00000201804.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000028229.13|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000202187.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000153561.6|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000201490.2|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr15_-_50746202_50746218	0.356301	Sox2	ENSMUST00000184885.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr15_+_73384407_73384457	0.355896	Sox2	ENSMUST00000043414.12|Dennd3|ENSMUSG00000036661.15|DENN/MADD domain containing 3
mm39_v1_chr4_+_133829891_133829896	0.354097	Sox2	ENSMUST00000074690.11|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11
mm39_v1_chr10_-_38998272_38998310	0.353223	Sox2	ENSMUST00000136546.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B
mm39_v1_chr2_+_29779227_29779255	0.351269	Sox2	ENSMUST00000123335.8|Odf2|ENSMUSG00000026790.20|outer dense fiber of sperm tails 2
mm39_v1_chr4_-_120672900_120672959	0.35113	Sox2	ENSMUST00000120779.8|Nfyc|ENSMUSG00000032897.18|nuclear transcription factor-Y gamma
mm39_v1_chr13_+_73911797_73911882	0.350315	Sox2	ENSMUST00000017900.9|Slc12a7|ENSMUSG00000017756.10|solute carrier family 12, member 7
mm39_v1_chr8_-_18791557_18791583	0.346116	Sox2	ENSMUST00000033846.7|Angpt2|ENSMUSG00000031465.7|angiopoietin 2
mm39_v1_chr12_-_98225676_98225718	0.345019	Sox2	ENSMUST00000021390.9|Galc|ENSMUSG00000021003.11|galactosylceramidase
mm39_v1_chr6_+_47812584_47812660	0.343713	Sox2	ENSMUST00000079881.11|Zfp398|ENSMUSG00000062519.14|zinc finger protein 398	ENSMUST00000114598.3|Zfp398|ENSMUSG00000062519.14|zinc finger protein 398
mm39_v1_chr15_+_39255185_39255196	0.339196	Sox2	ENSMUST00000228839.2|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2
mm39_v1_chr2_-_87543523_87543523	0.32676	Sox2	ENSMUST00000214209.2|Olfr1137|ENSMUSG00000075150.3|olfactory receptor 1137
mm39_v1_chr10_-_69048928_69048959	0.326206	Sox2	ENSMUST00000170048.2|A930033H14Rik|ENSMUSG00000090622.2|RIKEN cDNA A930033H14 gene
mm39_v1_chr2_+_68691902_68691930	0.325453	Sox2	ENSMUST00000176018.2|Cers6|ENSMUSG00000027035.11|ceramide synthase 6
mm39_v1_chr1_-_58463200_58463234	0.322874	Sox2	ENSMUST00000034868.14|Clk1|ENSMUSG00000026034.18|CDC-like kinase 1
mm39_v1_chr7_-_104250951_104250986	0.321467	Sox2	ENSMUST00000216750.2|Olfr655|ENSMUSG00000051182.6|olfactory receptor 655	ENSMUST00000215538.2|Olfr655|ENSMUSG00000051182.6|olfactory receptor 655
mm39_v1_chr2_+_167380112_167380130	0.32055	Sox2	ENSMUST00000052631.8|Snai1|ENSMUSG00000042821.8|snail family zinc finger 1
mm39_v1_chr9_+_106391771_106391783	0.320323	Sox2	ENSMUST00000085113.5|Iqcf5|ENSMUSG00000066382.5|IQ motif containing F5
mm39_v1_chr3_+_146205864_146205888	0.318892	Sox2	ENSMUST00000119130.2|Gng5|ENSMUSG00000068523.13|guanine nucleotide binding protein (G protein), gamma 5
mm39_v1_chr2_-_7400780_7400842	0.318842	Sox2	ENSMUST00000002176.13|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr9_-_110818679_110818796	0.317622	Sox2	ENSMUST00000084922.6|Rtp3|ENSMUSG00000066319.7|receptor transporter protein 3	ENSMUST00000199891.2|Rtp3|ENSMUSG00000066319.7|receptor transporter protein 3
mm39_v1_chr18_-_43820759_43820838	0.317536	Sox2	ENSMUST00000082254.8|Jakmip2|ENSMUSG00000024502.11|janus kinase and microtubule interacting protein 2
mm39_v1_chr11_-_90528888_90528926	0.316282	Sox2	ENSMUST00000020858.14|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000107875.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000107872.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000143203.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4
mm39_v1_chr4_-_155870321_155870337	0.314464	Sox2	ENSMUST00000097742.3|Tmem88b|ENSMUSG00000073680.3|transmembrane protein 88B
mm39_v1_chr16_+_4653271_4653286	0.31153	Sox2	ENSMUST00000100211.11|4930562C15Rik|ENSMUSG00000022518.17|RIKEN cDNA 4930562C15 gene
mm39_v1_chr3_-_36667434_36667517	0.307528	Sox2	ENSMUST00000108155.8|Bbs7|ENSMUSG00000037325.11|Bardet-Biedl syndrome 7 (human)
mm39_v1_chr10_-_60667161_60667226	0.304832	Sox2	ENSMUST00000218637.2|Unc5b|ENSMUSG00000020099.9|unc-5 netrin receptor B
mm39_v1_chr3_+_88049633_88049790	0.303589	Sox2	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr10_+_42736345_42736373	0.301785	Sox2	ENSMUST00000063063.14|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr17_-_71160477_71160543	0.301322	Sox2	ENSMUST00000118283.8|Tgif1|ENSMUSG00000047407.18|TGFB-induced factor homeobox 1
mm39_v1_chr10_-_129962924_129962924	0.301225	Sox2	ENSMUST00000074161.2|Olfr824|ENSMUSG00000095804.3|olfactory receptor 824
mm39_v1_chr5_+_67125759_67125790	0.301	Sox2	ENSMUST00000238993.2|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1	ENSMUST00000038188.14|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr7_+_43090206_43090257	0.299084	Sox2	ENSMUST00000040227.3|Cldnd2|ENSMUSG00000038973.3|claudin domain containing 2
mm39_v1_chr17_-_25104910_25104925	0.299002	Sox2	ENSMUST00000234928.2|Nubp2|ENSMUSG00000039183.7|nucleotide binding protein 2
mm39_v1_chr11_-_40586029_40586055	0.29732	Sox2	ENSMUST00000101347.10|Mat2b|ENSMUSG00000042032.14|methionine adenosyltransferase II, beta
mm39_v1_chr9_+_61280501_61280720	0.29688	Sox2	ENSMUST00000162583.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000161993.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000160882.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000160724.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000162973.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000159050.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3
mm39_v1_chr3_-_116762617_116762653	0.296134	Sox2	ENSMUST00000143611.2|Palmd|ENSMUSG00000033377.15|palmdelphin	ENSMUST00000040097.14|Palmd|ENSMUSG00000033377.15|palmdelphin
mm39_v1_chr10_+_127575407_127575457	0.295861	Sox2	ENSMUST00000054287.9|Zbtb39|ENSMUSG00000044617.9|zinc finger and BTB domain containing 39
mm39_v1_chr18_+_35732272_35732322	0.293267	Sox2	ENSMUST00000235210.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2
mm39_v1_chr6_+_48578935_48578997	0.293008	Sox2	ENSMUST00000204095.3|Zfp775|ENSMUSG00000007216.7|zinc finger protein 775
mm39_v1_chr2_+_164721277_164721318	0.292735	Sox2	ENSMUST00000041643.5|Pcif1|ENSMUSG00000039849.7|phosphorylated CTD interacting factor 1
mm39_v1_chr1_-_135032972_135033014	0.288077	Sox2	ENSMUST00000044828.14|Lgr6|ENSMUSG00000042793.14|leucine-rich repeat-containing G protein-coupled receptor 6
mm39_v1_chr17_+_35117905_35117962	0.287922	Sox2	ENSMUST00000097342.10|Ehmt2|ENSMUSG00000013787.16|euchromatic histone lysine N-methyltransferase 2	ENSMUST00000013931.12|Ehmt2|ENSMUSG00000013787.16|euchromatic histone lysine N-methyltransferase 2
mm39_v1_chr13_-_67442285_67442285	0.284555	Sox2	ENSMUST00000224325.2|Zfp457|ENSMUSG00000055341.11|zinc finger protein 457
mm39_v1_chr14_+_66378382_66378404	0.282766	Sox2	ENSMUST00000022620.11|Chrna2|ENSMUSG00000022041.11|cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
mm39_v1_chr17_+_35439810_35439810	0.282528	Sox2	ENSMUST00000118793.2|Gm16181|ENSMUSG00000081650.2|predicted gene 16181
mm39_v1_chr3_-_151953894_151953912	0.279899	Sox2	ENSMUST00000196529.5|Nexn|ENSMUSG00000039103.13|nexilin
mm39_v1_chr9_+_110592709_110592789	0.279664	Sox2	ENSMUST00000079784.12|Myl3|ENSMUSG00000059741.14|myosin, light polypeptide 3
mm39_v1_chr15_-_73295029_73295068	0.278338	Sox2	ENSMUST00000239146.2|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000110036.11|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000228180.3|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2
mm39_v1_chr17_-_36008863_36008894	0.277547	Sox2	ENSMUST00000146472.8|Ddr1|ENSMUSG00000003534.18|discoidin domain receptor family, member 1
mm39_v1_chr16_-_34334314_34334427	0.276532	Sox2	ENSMUST00000151491.8|Kalrn|ENSMUSG00000061751.17|kalirin, RhoGEF kinase	ENSMUST00000114960.9|Kalrn|ENSMUSG00000061751.17|kalirin, RhoGEF kinase
mm39_v1_chr1_-_175520185_175520467	0.276103	Sox2	ENSMUST00000104984.4|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000209720.2|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000211489.2|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000027809.8|Opn3|ENSMUSG00000026525.10|opsin 3	ENSMUST00000210367.2|Chml|ENSMUSG00000078185.4|choroideremia-like
mm39_v1_chr3_-_127631068_127631172	0.275881	Sox2	ENSMUST00000051737.8|Ap1ar|ENSMUSG00000074238.7|adaptor-related protein complex 1 associated regulatory protein	ENSMUST00000200409.5|Ap1ar|ENSMUSG00000074238.7|adaptor-related protein complex 1 associated regulatory protein
mm39_v1_chr9_-_49479791_49479849	0.275407	Sox2	ENSMUST00000194252.6|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1
mm39_v1_chr4_-_156281935_156281953	0.27525	Sox2	ENSMUST00000180572.2|Agrn|ENSMUSG00000041936.19|agrin
mm39_v1_chr2_+_153083419_153083524	0.269638	Sox2	ENSMUST00000049863.12|Pofut1|ENSMUSG00000046020.14|protein O-fucosyltransferase 1	ENSMUST00000099192.10|Pofut1|ENSMUSG00000046020.14|protein O-fucosyltransferase 1	ENSMUST00000109794.2|Pofut1|ENSMUSG00000046020.14|protein O-fucosyltransferase 1
mm39_v1_chr2_+_3714515_3714537	0.269436	Sox2	ENSMUST00000115053.9|Fam107b|ENSMUSG00000026655.16|family with sequence similarity 107, member B
mm39_v1_chr16_-_59138611_59138611	0.268393	Sox2	ENSMUST00000216261.2|Olfr204|ENSMUSG00000095928.4|olfactory receptor 204
mm39_v1_chr2_-_160208977_160208993	0.264837	Sox2	ENSMUST00000099126.5|Mafb|ENSMUSG00000074622.5|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm39_v1_chr3_-_9898676_9898706	0.26433	Sox2	ENSMUST00000108384.9|Pag1|ENSMUSG00000027508.16|phosphoprotein associated with glycosphingolipid microdomains 1
mm39_v1_chr2_+_152907875_152907924	0.263619	Sox2	ENSMUST00000238488.2|Ccm2l|ENSMUSG00000027474.14|cerebral cavernous malformation 2-like	ENSMUST00000129377.8|Ccm2l|ENSMUSG00000027474.14|cerebral cavernous malformation 2-like	ENSMUST00000109800.2|Ccm2l|ENSMUSG00000027474.14|cerebral cavernous malformation 2-like
mm39_v1_chr6_-_50238723_50238769	0.262215	Sox2	ENSMUST00000101405.10|Gsdme|ENSMUSG00000029821.16|gasdermin E	ENSMUST00000165099.8|Gsdme|ENSMUSG00000029821.16|gasdermin E	ENSMUST00000170142.8|Gsdme|ENSMUSG00000029821.16|gasdermin E
mm39_v1_chr13_+_64580128_64580247	0.259819	Sox2	ENSMUST00000021939.8|Cdk20|ENSMUSG00000021483.9|cyclin-dependent kinase 20
mm39_v1_chr18_-_47501897_47501945	0.258506	Sox2	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr11_+_6366259_6366319	0.256826	Sox2	ENSMUST00000213200.2|Ppia|ENSMUSG00000071866.13|peptidylprolyl isomerase A
mm39_v1_chr12_+_76593799_76593864	0.25336	Sox2	ENSMUST00000218380.2|Plekhg3|ENSMUSG00000052609.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	ENSMUST00000219751.2|Plekhg3|ENSMUSG00000052609.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm39_v1_chr12_+_52746158_52746186	0.253077	Sox2	ENSMUST00000095737.5|Akap6|ENSMUSG00000061603.9|A kinase (PRKA) anchor protein 6
mm39_v1_chr6_-_51989456_51989531	0.25229	Sox2	ENSMUST00000078214.8|Skap2|ENSMUSG00000059182.9|src family associated phosphoprotein 2	ENSMUST00000204778.3|Skap2|ENSMUSG00000059182.9|src family associated phosphoprotein 2
mm39_v1_chr16_+_27207722_27207748	0.247569	Sox2	ENSMUST00000039443.14|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50	ENSMUST00000096127.11|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50
mm39_v1_chr1_-_4479445_4479513	0.246881	Sox2	ENSMUST00000208660.2|Rp1|ENSMUSG00000025900.14|retinitis pigmentosa 1 (human)
mm39_v1_chr16_-_97652994_97653055	0.244677	Sox2	ENSMUST00000121584.8|Prdm15|ENSMUSG00000014039.19|PR domain containing 15
mm39_v1_chr14_-_121976273_121976372	0.24436	Sox2	ENSMUST00000212376.3|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9	ENSMUST00000239077.2|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9
mm39_v1_chr18_+_80090069_80090120	0.24432	Sox2	ENSMUST00000070219.9|Pard6g|ENSMUSG00000056214.10|par-6 family cell polarity regulator gamma
mm39_v1_chr18_+_35731658_35731729	0.24427	Sox2	ENSMUST00000041314.17|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2	ENSMUST00000236666.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2	ENSMUST00000236020.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2	ENSMUST00000235400.2|Paip2|ENSMUSG00000037058.17|polyadenylate-binding protein-interacting protein 2
mm39_v1_chr19_+_29388312_29388348	0.242336	Sox2	ENSMUST00000112576.4|Pdcd1lg2|ENSMUSG00000016498.11|programmed cell death 1 ligand 2
mm39_v1_chr4_-_118036827_118036879	0.240926	Sox2	ENSMUST00000097911.9|Kdm4a|ENSMUSG00000033326.16|lysine (K)-specific demethylase 4A
mm39_v1_chr2_-_140513382_140513399	0.240909	Sox2	ENSMUST00000110057.3|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chr2_+_14609063_14609117	0.238426	Sox2	ENSMUST00000114723.9|Cacnb2|ENSMUSG00000057914.16|calcium channel, voltage-dependent, beta 2 subunit
mm39_v1_chr11_+_3438274_3438287	0.237553	Sox2	ENSMUST00000064265.13|Pla2g3|ENSMUSG00000034579.18|phospholipase A2, group III
mm39_v1_chr6_+_122490577_122490627	0.235786	Sox2	ENSMUST00000118626.8|Mfap5|ENSMUSG00000030116.15|microfibrillar associated protein 5
mm39_v1_chr19_-_11301919_11302002	0.233468	Sox2	ENSMUST00000159269.2|Ms4a7|ENSMUSG00000024672.12|membrane-spanning 4-domains, subfamily A, member 7
mm39_v1_chrX_+_152281200_152281223	0.233153	Sox2	ENSMUST00000060714.10|Ubqln2|ENSMUSG00000050148.10|ubiquilin 2
mm39_v1_chr8_+_84627332_84627364	0.232726	Sox2	ENSMUST00000045393.15|Adgrl1|ENSMUSG00000013033.17|adhesion G protein-coupled receptor L1	ENSMUST00000132500.8|Adgrl1|ENSMUSG00000013033.17|adhesion G protein-coupled receptor L1	ENSMUST00000152978.8|Adgrl1|ENSMUSG00000013033.17|adhesion G protein-coupled receptor L1
mm39_v1_chr17_-_31363245_31363262	0.22682	Sox2	ENSMUST00000024826.8|Tff2|ENSMUSG00000024028.8|trefoil factor 2 (spasmolytic protein 1)
mm39_v1_chr17_-_26099832_26099832	0.22194	Sox2	ENSMUST00000176696.3|Wfikkn1|ENSMUSG00000071192.7|WAP, FS, Ig, KU, and NTR-containing protein 1
mm39_v1_chr19_+_30007910_30007928	0.221624	Sox2	ENSMUST00000025739.14|Uhrf2|ENSMUSG00000024817.14|ubiquitin-like, containing PHD and RING finger domains 2
mm39_v1_chr2_+_25390762_25390796	0.22039	Sox2	ENSMUST00000015239.10|Fbxw5|ENSMUSG00000015095.13|F-box and WD-40 domain protein 5
mm39_v1_chr7_-_103535459_103535459	0.217089	Sox2	ENSMUST00000216303.2|Olfr66|ENSMUSG00000058200.3|olfactory receptor 66
mm39_v1_chr2_-_125701059_125701141	0.217029	Sox2	ENSMUST00000110463.8|Cops2|ENSMUSG00000027206.14|COP9 signalosome subunit 2	ENSMUST00000028635.6|Cops2|ENSMUSG00000027206.14|COP9 signalosome subunit 2
mm39_v1_chr11_-_70111602_70111660	0.21402	Sox2	ENSMUST00000141290.2|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13	ENSMUST00000159867.2|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm39_v1_chr6_-_99243455_99243501	0.213535	Sox2	ENSMUST00000113326.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr11_-_69791712_69791755	0.210969	Sox2	ENSMUST00000108621.9|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene	ENSMUST00000100969.9|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene
mm39_v1_chr7_+_140641010_140641022	0.21003	Sox2	ENSMUST00000048002.7|B4galnt4|ENSMUSG00000055629.6|beta-1,4-N-acetyl-galactosaminyl transferase 4
mm39_v1_chr12_-_45120895_45121089	0.206162	Sox2	ENSMUST00000120531.8|Stxbp6|ENSMUSG00000046314.17|syntaxin binding protein 6 (amisyn)	ENSMUST00000143376.8|Stxbp6|ENSMUSG00000046314.17|syntaxin binding protein 6 (amisyn)
mm39_v1_chr19_+_9824919_9824926	0.202495	Sox2	ENSMUST00000179814.3|Scgb2a2|ENSMUSG00000096872.3|secretoglobin, family 2A, member 2
mm39_v1_chr4_+_32238950_32238964	0.198656	Sox2	ENSMUST00000037416.13|Bach2|ENSMUSG00000040270.17|BTB and CNC homology, basic leucine zipper transcription factor 2
mm39_v1_chr1_-_171115487_171115564	0.198333	Sox2	ENSMUST00000111305.8|Usp21|ENSMUSG00000053483.16|ubiquitin specific peptidase 21	ENSMUST00000065941.12|Usp21|ENSMUSG00000053483.16|ubiquitin specific peptidase 21
mm39_v1_chr9_+_86349207_86349225	0.196844	Sox2	ENSMUST00000190957.7|Dop1a|ENSMUSG00000034973.17|DOP1 leucine zipper like protein A
mm39_v1_chr10_-_80223475_80223501	0.1931	Sox2	ENSMUST00000105350.3|Mex3d|ENSMUSG00000048696.12|mex3 RNA binding family member D
mm39_v1_chr14_-_52248324_52248369	0.189586	Sox2	ENSMUST00000226964.2|Zfp219|ENSMUSG00000049295.18|zinc finger protein 219
mm39_v1_chr18_-_47501513_47501559	0.189533	Sox2	ENSMUST00000076043.13|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000135790.8|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr11_-_69791756_69791767	0.189459	Sox2	ENSMUST00000018714.13|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene	ENSMUST00000128046.2|2810408A11Rik|ENSMUSG00000018570.18|RIKEN cDNA 2810408A11 gene
mm39_v1_chr11_-_3599673_3599673	0.188138	Sox2	ENSMUST00000193809.2|Tug1|ENSMUSG00000056579.19|taurine upregulated gene 1
mm39_v1_chr18_+_76375206_76375245	0.187878	Sox2	ENSMUST00000172198.8|Smad2|ENSMUSG00000024563.17|SMAD family member 2
mm39_v1_chr3_-_146487102_146487187	0.185576	Sox2	ENSMUST00000005164.12|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr2_-_140513320_140513377	0.184799	Sox2	ENSMUST00000056760.4|Flrt3|ENSMUSG00000051379.13|fibronectin leucine rich transmembrane protein 3
mm39_v1_chrX_+_18028814_18028897	0.184403	Sox2	ENSMUST00000044484.13|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A	ENSMUST00000052368.9|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A
mm39_v1_chr10_+_42378193_42378286	0.182479	Sox2	ENSMUST00000105499.2|Snx3|ENSMUSG00000019804.13|sorting nexin 3
mm39_v1_chr13_-_9815350_9815405	0.181426	Sox2	ENSMUST00000110636.9|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11	ENSMUST00000152725.8|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11
mm39_v1_chr3_+_108000425_108000454	0.175377	Sox2	ENSMUST00000151326.8|Gnat2|ENSMUSG00000009108.16|guanine nucleotide binding protein, alpha transducing 2
mm39_v1_chrX_+_56098908_56098975	0.17485	Sox2	ENSMUST00000114751.9|Htatsf1|ENSMUSG00000067873.12|HIV TAT specific factor 1	ENSMUST00000088652.6|Htatsf1|ENSMUSG00000067873.12|HIV TAT specific factor 1
mm39_v1_chr3_-_141874955_141875023	0.173914	Sox2	ENSMUST00000098568.8|Bmpr1b|ENSMUSG00000052430.16|bone morphogenetic protein receptor, type 1B
mm39_v1_chr13_+_83652150_83652170	0.172299	Sox2	ENSMUST00000198199.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr10_-_12745109_12745231	0.170509	Sox2	ENSMUST00000218635.2|Utrn|ENSMUSG00000019820.12|utrophin
mm39_v1_chr4_+_43406435_43406615	0.167305	Sox2	ENSMUST00000098106.9|Rusc2|ENSMUSG00000035969.16|RUN and SH3 domain containing 2	ENSMUST00000139198.2|Rusc2|ENSMUSG00000035969.16|RUN and SH3 domain containing 2
mm39_v1_chr19_+_5012336_5012360	0.164368	Sox2	ENSMUST00000237974.2|Mrpl11|ENSMUSG00000024902.6|mitochondrial ribosomal protein L11
mm39_v1_chr13_+_83652280_83652346	0.164188	Sox2	ENSMUST00000199450.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr8_+_105897300_105897446	0.161461	Sox2	ENSMUST00000052209.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109392.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109395.8|Cbfb|ENSMUSG00000031885.15|core binding factor beta
mm39_v1_chr5_-_105287405_105287452	0.160267	Sox2	ENSMUST00000100961.5|Gbp9|ENSMUSG00000029298.16|guanylate-binding protein 9	ENSMUST00000031235.13|Gbp8|ENSMUSG00000034438.17|guanylate-binding protein 8	ENSMUST00000197799.2|Gbp4|ENSMUSG00000079363.8|guanylate binding protein 4	ENSMUST00000199629.2|Gbp4|ENSMUSG00000079363.8|guanylate binding protein 4	ENSMUST00000196677.5|Gbp4|ENSMUSG00000079363.8|guanylate binding protein 4	ENSMUST00000100962.8|Gbp4|ENSMUSG00000079363.8|guanylate binding protein 4
mm39_v1_chr16_-_34334454_34334498	0.159645	Sox2	ENSMUST00000089655.12|Kalrn|ENSMUSG00000061751.17|kalirin, RhoGEF kinase
mm39_v1_chr11_-_78948432_78948453	0.15608	Sox2	ENSMUST00000129463.2|Ksr1|ENSMUSG00000018334.19|kinase suppressor of ras 1
mm39_v1_chr17_-_29226700_29226804	0.153204	Sox2	ENSMUST00000233441.2|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr12_-_115567853_115568053	0.143526	Sox2	ENSMUST00000103538.3|Ighv1-67|ENSMUSG00000095863.3|immunoglobulin heavy variable V1-67	ENSMUST00000198646.2|Ighv1-67|ENSMUSG00000095863.3|immunoglobulin heavy variable V1-67
mm39_v1_chr6_-_69678271_69678328	0.142611	Sox2	ENSMUST00000103363.2|Igkv4-50|ENSMUSG00000076562.2|immunoglobulin kappa variable 4-50
mm39_v1_chr18_+_37807357_37807418	0.142346	Sox2	ENSMUST00000073447.8|Pcdhga3|ENSMUSG00000104346.2|protocadherin gamma subfamily A, 3
mm39_v1_chr14_+_121272950_121272990	0.141037	Sox2	ENSMUST00000026635.8|Farp1|ENSMUSG00000025555.15|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm39_v1_chr17_-_29226886_29226937	0.137451	Sox2	ENSMUST00000232723.2|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr11_-_18968979_18968990	0.136899	Sox2	ENSMUST00000144988.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr16_+_18166045_18166138	0.136113	Sox2	ENSMUST00000239533.1|ARVCF|ENSMUSG00000118669.2|armadillo repeat deleted in velocardiofacial syndrome	ENSMUST00000239534.1|ARVCF|ENSMUSG00000118669.2|armadillo repeat deleted in velocardiofacial syndrome
mm39_v1_chr2_+_32425327_32425371	0.135914	Sox2	ENSMUST00000133512.2|Fam102a|ENSMUSG00000039157.13|family with sequence similarity 102, member A	ENSMUST00000048375.6|Fam102a|ENSMUSG00000039157.13|family with sequence similarity 102, member A
mm39_v1_chr3_+_68479578_68479723	0.135905	Sox2	ENSMUST00000170788.9|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr7_-_29869126_29869192	0.133045	Sox2	ENSMUST00000062181.9|Zfp146|ENSMUSG00000037029.9|zinc finger protein 146
mm39_v1_chr1_+_97697881_97697935	0.130386	Sox2	ENSMUST00000112844.10|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1	ENSMUST00000112842.8|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1	ENSMUST00000027571.13|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1
mm39_v1_chr14_+_51162635_51162742	0.129432	Sox2	ENSMUST00000128395.2|Apex1|ENSMUSG00000035960.15|apurinic/apyrimidinic endonuclease 1
mm39_v1_chr9_-_116004265_116004333	0.129418	Sox2	ENSMUST00000061101.12|Tgfbr2|ENSMUSG00000032440.14|transforming growth factor, beta receptor II
mm39_v1_chr12_-_111679344_111679366	0.128753	Sox2	ENSMUST00000160576.2|Bag5|ENSMUSG00000049792.7|BCL2-associated athanogene 5
mm39_v1_chr7_+_127069526_127069544	0.128662	Sox2	ENSMUST00000106292.8|Prr14|ENSMUSG00000030822.16|proline rich 14
mm39_v1_chr2_+_72128239_72128257	0.126795	Sox2	ENSMUST00000144111.2|Map3k20|ENSMUSG00000004085.15|mitogen-activated protein kinase kinase kinase 20
mm39_v1_chrX_+_12937714_12937797	0.125459	Sox2	ENSMUST00000169594.9|Usp9x|ENSMUSG00000031010.18|ubiquitin specific peptidase 9, X chromosome	ENSMUST00000089302.11|Usp9x|ENSMUSG00000031010.18|ubiquitin specific peptidase 9, X chromosome
mm39_v1_chr6_-_42669963_42670016	0.124887	Sox2	ENSMUST00000045140.5|Tcaf1|ENSMUSG00000036667.15|TRPM8 channel-associated factor 1
mm39_v1_chr7_+_112278520_112278532	0.124554	Sox2	ENSMUST00000084705.13|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239442.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239404.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000059768.18|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr8_+_21624626_21624658	0.122044	Sox2	ENSMUST00000098898.5|Defa30|ENSMUSG00000074444.5|defensin, alpha, 30
mm39_v1_chr19_-_7584468_7584568	0.121714	Sox2	ENSMUST00000079902.6|Lgals12|ENSMUSG00000024972.17|lectin, galactose binding, soluble 12	ENSMUST00000099729.10|Lgals12|ENSMUSG00000024972.17|lectin, galactose binding, soluble 12	ENSMUST00000159983.8|Lgals12|ENSMUSG00000024972.17|lectin, galactose binding, soluble 12
mm39_v1_chr5_+_34140877_34140892	0.120954	Sox2	ENSMUST00000114382.2|Gm1673|ENSMUSG00000070858.13|predicted gene 1673
mm39_v1_chr18_-_88912446_88912497	0.120883	Sox2	ENSMUST00000070116.12|Socs6|ENSMUSG00000056153.16|suppressor of cytokine signaling 6	ENSMUST00000125362.8|Socs6|ENSMUSG00000056153.16|suppressor of cytokine signaling 6
mm39_v1_chr18_+_37651393_37651412	0.106256	Sox2	ENSMUST00000097609.3|Pcdhb22|ENSMUSG00000073591.5|protocadherin beta 22
mm39_v1_chr12_+_38831093_38831128	0.103262	Sox2	ENSMUST00000161513.9|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr15_+_44291470_44291554	0.102803	Sox2	ENSMUST00000226827.2|Eny2|ENSMUSG00000022338.9|ENY2 transcription and export complex 2 subunit	ENSMUST00000060652.5|Eny2|ENSMUSG00000022338.9|ENY2 transcription and export complex 2 subunit
mm39_v1_chr9_-_66500274_66500305	0.101387	Sox2	ENSMUST00000174387.2|Usp3|ENSMUSG00000032376.13|ubiquitin specific peptidase 3
mm39_v1_chr1_+_190769010_190769021	0.0986976	Sox2	ENSMUST00000077889.8|Spata45|ENSMUSG00000057072.12|spermatogenesis associated 45
mm39_v1_chr5_+_124939739_124939836	0.0985463	Sox2	ENSMUST00000111417.9|Zfp664|ENSMUSG00000079215.9|zinc finger protein 664
mm39_v1_chr12_+_25024913_25024992	0.0969774	Sox2	ENSMUST00000066652.7|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000220459.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000222941.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220
mm39_v1_chr17_+_31515163_31515341	0.0960443	Sox2	ENSMUST00000235972.2|Slc37a1|ENSMUSG00000024036.17|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	ENSMUST00000165149.3|Slc37a1|ENSMUSG00000024036.17|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	ENSMUST00000236251.2|Slc37a1|ENSMUSG00000024036.17|solute carrier family 37 (glycerol-3-phosphate transporter), member 1
mm39_v1_chr13_-_69887964_69888008	0.092728	Sox2	ENSMUST00000065118.7|Ube2ql1|ENSMUSG00000052981.7|ubiquitin-conjugating enzyme E2Q family-like 1
mm39_v1_chr10_-_82459024_82459088	0.0886786	Sox2	ENSMUST00000183363.2|1190007I07Rik|ENSMUSG00000063320.12|RIKEN cDNA 1190007I07 gene	ENSMUST00000079648.12|1190007I07Rik|ENSMUSG00000063320.12|RIKEN cDNA 1190007I07 gene	ENSMUST00000185168.8|1190007I07Rik|ENSMUSG00000063320.12|RIKEN cDNA 1190007I07 gene
mm39_v1_chr17_+_37313466_37313488	0.0884428	Sox2	ENSMUST00000173588.8|Zfp57|ENSMUSG00000036036.16|zinc finger protein 57
mm39_v1_chr15_+_81756671_81756715	0.0884021	Sox2	ENSMUST00000135198.2|Aco2|ENSMUSG00000022477.14|aconitase 2, mitochondrial	ENSMUST00000157003.8|Aco2|ENSMUSG00000022477.14|aconitase 2, mitochondrial	ENSMUST00000229068.2|Aco2|ENSMUSG00000022477.14|aconitase 2, mitochondrial
mm39_v1_chr5_-_138270995_138271102	0.0869106	Sox2	ENSMUST00000161665.2|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4	ENSMUST00000100530.8|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4	ENSMUST00000161279.8|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4	ENSMUST00000161647.8|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4
mm39_v1_chr6_-_50374048_50374130	0.0834288	Sox2	ENSMUST00000136926.3|Osbpl3|ENSMUSG00000029822.16|oxysterol binding protein-like 3
mm39_v1_chr9_-_75504926_75504938	0.0824008	Sox2	ENSMUST00000164100.2|Tmod2|ENSMUSG00000032186.16|tropomodulin 2
mm39_v1_chr17_-_87754282_87754363	0.0802879	Sox2	ENSMUST00000234406.2|Calm2|ENSMUSG00000036438.15|calmodulin 2	ENSMUST00000040440.7|Calm2|ENSMUSG00000036438.15|calmodulin 2
mm39_v1_chr16_-_8490010_8490026	0.072319	Sox2	ENSMUST00000008537.10|Carhsp1|ENSMUSG00000008393.10|calcium regulated heat stable protein 1
mm39_v1_chr8_-_41087793_41087849	0.0702424	Sox2	ENSMUST00000173957.2|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7	ENSMUST00000048898.17|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7	ENSMUST00000174205.8|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7
mm39_v1_chr9_+_39903409_39903409	0.0695143	Sox2	ENSMUST00000217600.2|Olfr978|ENSMUSG00000044292.5|olfactory receptor 978
mm39_v1_chr12_+_76417040_76417040	0.067776	Sox2	ENSMUST00000042779.4|Zbtb1|ENSMUSG00000033454.7|zinc finger and BTB domain containing 1
mm39_v1_chr14_+_54032814_54032814	0.0670466	Sox2	ENSMUST00000103671.4|Trav13-5|ENSMUSG00000087666.4|T cell receptor alpha variable 13-5
mm39_v1_chrX_-_37665041_37665081	0.0641582	Sox2	ENSMUST00000050083.6|Cul4b|ENSMUSG00000031095.16|cullin 4B	ENSMUST00000115118.8|Cul4b|ENSMUSG00000031095.16|cullin 4B
mm39_v1_chr18_+_76374959_76375117	0.0640469	Sox2	ENSMUST00000171256.8|Smad2|ENSMUSG00000024563.17|SMAD family member 2
mm39_v1_chr2_+_89821818_89821818	0.0619341	Sox2	ENSMUST00000216953.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261
mm39_v1_chr14_+_5894220_5894254	0.061622	Sox2	ENSMUST00000063750.8|Rarb|ENSMUSG00000017491.10|retinoic acid receptor, beta
mm39_v1_chr10_+_81226145_81226161	0.0589193	Sox2	ENSMUST00000156229.3|Gm48552|ENSMUSG00000114004.2|predicted gene, 48552
mm39_v1_chr8_+_124138163_124138329	0.0588833	Sox2	ENSMUST00000071134.4|Tubb3|ENSMUSG00000062380.5|tubulin, beta 3 class III	ENSMUST00000212743.2|Tubb3|ENSMUSG00000062380.5|tubulin, beta 3 class III
mm39_v1_chr5_+_20112704_20112764	0.0574625	Sox2	ENSMUST00000115267.7|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm39_v1_chr4_+_102278715_102278770	0.0572182	Sox2	ENSMUST00000106904.9|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr1_+_70764874_70765082	0.0560998	Sox2	ENSMUST00000053922.12|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000161937.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000162182.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like
mm39_v1_chr7_-_26385862_26385862	0.0546348	Sox2	ENSMUST00000077356.7|Cyp2b23|ENSMUSG00000040650.9|cytochrome P450, family 2, subfamily b, polypeptide 23
mm39_v1_chr4_+_112089442_112089471	0.0531789	Sox2	ENSMUST00000038455.12|Skint3|ENSMUSG00000070868.12|selection and upkeep of intraepithelial T cells 3	ENSMUST00000170945.2|Skint3|ENSMUSG00000070868.12|selection and upkeep of intraepithelial T cells 3
mm39_v1_chr7_-_104628324_104628333	0.0515601	Sox2	ENSMUST00000217091.2|Olfr671|ENSMUSG00000094531.4|olfactory receptor 671	ENSMUST00000210963.3|Olfr671|ENSMUSG00000094531.4|olfactory receptor 671
mm39_v1_chr9_-_66500312_66500323	0.0508127	Sox2	ENSMUST00000098613.9|Usp3|ENSMUSG00000032376.13|ubiquitin specific peptidase 3
mm39_v1_chr13_-_9815276_9815306	0.0503785	Sox2	ENSMUST00000130151.8|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11
mm39_v1_chr1_+_187995096_187995231	0.0498704	Sox2	ENSMUST00000060479.14|Ush2a|ENSMUSG00000026609.16|usherin
mm39_v1_chr15_-_9529898_9529932	0.0490968	Sox2	ENSMUST00000228782.2|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor	ENSMUST00000003981.6|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor
mm39_v1_chr18_+_37488174_37488324	0.0489563	Sox2	ENSMUST00000192867.2|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8	ENSMUST00000051163.3|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8
mm39_v1_chr18_+_24603888_24603952	0.0485303	Sox2	ENSMUST00000097646.5|2700062C07Rik|ENSMUSG00000024273.9|RIKEN cDNA 2700062C07 gene
mm39_v1_chr16_+_23247883_23247883	0.0452026	Sox2	ENSMUST00000038730.7|Rtp1|ENSMUSG00000033383.7|receptor transporter protein 1
mm39_v1_chr9_+_106331111_106331132	0.0439433	Sox2	ENSMUST00000185779.7|Pcbp4|ENSMUSG00000023495.14|poly(rC) binding protein 4
mm39_v1_chr12_-_84993695_84993697	0.0425726	Sox2	ENSMUST00000169161.8|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1
mm39_v1_chr5_+_8710059_8710099	0.041902	Sox2	ENSMUST00000047753.5|Abcb1a|ENSMUSG00000040584.9|ATP-binding cassette, sub-family B (MDR/TAP), member 1A
mm39_v1_chrX_+_151922936_151923006	0.0416938	Sox2	ENSMUST00000039720.11|Rragb|ENSMUSG00000041658.13|Ras-related GTP binding B	ENSMUST00000144175.3|Rragb|ENSMUSG00000041658.13|Ras-related GTP binding B
mm39_v1_chr4_+_152160713_152160840	0.0408537	Sox2	ENSMUST00000239025.2|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm39_v1_chr13_+_22129246_22129316	0.0394296	Sox2	ENSMUST00000176511.8|Zfp184|ENSMUSG00000006720.17|zinc finger protein 184 (Kruppel-like)	ENSMUST00000102978.8|Zfp184|ENSMUSG00000006720.17|zinc finger protein 184 (Kruppel-like)	ENSMUST00000152258.9|Zfp184|ENSMUSG00000006720.17|zinc finger protein 184 (Kruppel-like)
mm39_v1_chr4_+_106768714_106768864	0.03881	Sox2	ENSMUST00000072753.13|Ssbp3|ENSMUSG00000061887.15|single-stranded DNA binding protein 3	ENSMUST00000097934.10|Ssbp3|ENSMUSG00000061887.15|single-stranded DNA binding protein 3
mm39_v1_chr10_-_130333265_130333265	0.0377117	Sox2	ENSMUST00000164227.4|Vmn2r87|ENSMUSG00000091511.4|vomeronasal 2, receptor 87
mm39_v1_chr6_+_123679629_123679629	0.0374283	Sox2	ENSMUST00000172391.4|Vmn2r23|ENSMUSG00000091620.4|vomeronasal 2, receptor 23
mm39_v1_chr17_+_37313502_37313562	0.0359738	Sox2	ENSMUST00000173921.8|Zfp57|ENSMUSG00000036036.16|zinc finger protein 57	ENSMUST00000172580.8|Zfp57|ENSMUSG00000036036.16|zinc finger protein 57
mm39_v1_chr5_+_95254797_95254797	0.0358582	Sox2	ENSMUST00000163216.2|Pramel45|ENSMUSG00000092166.3|PRAME like 45
mm39_v1_chr15_+_102234551_102234587	0.0336627	Sox2	ENSMUST00000166658.8|Pfdn5|ENSMUSG00000001289.13|prefoldin 5	ENSMUST00000062492.11|Pfdn5|ENSMUSG00000001289.13|prefoldin 5
mm39_v1_chr10_+_42378026_42378039	0.0315077	Sox2	ENSMUST00000105500.8|Snx3|ENSMUSG00000019804.13|sorting nexin 3	ENSMUST00000019939.12|Snx3|ENSMUSG00000019804.13|sorting nexin 3
mm39_v1_chr7_+_28524627_28524642	0.0291971	Sox2	ENSMUST00000066264.13|Ech1|ENSMUSG00000053898.13|enoyl coenzyme A hydratase 1, peroxisomal
mm39_v1_chr18_+_89195089_89195152	0.0285787	Sox2	ENSMUST00000236644.2|Cd226|ENSMUSG00000034028.17|CD226 antigen	ENSMUST00000236828.2|Cd226|ENSMUSG00000034028.17|CD226 antigen
mm39_v1_chr9_-_59393893_59393919	0.0281235	Sox2	ENSMUST00000171975.8|Arih1|ENSMUSG00000025234.12|ariadne RBR E3 ubiquitin protein ligase 1
mm39_v1_chr16_-_19060440_19060460	0.0278694	Sox2	ENSMUST00000103751.3|Iglv3|ENSMUSG00000076939.3|immunoglobulin lambda variable 3
mm39_v1_chr17_+_35117438_35117479	0.0252483	Sox2	ENSMUST00000114033.9|Ehmt2|ENSMUSG00000013787.16|euchromatic histone lysine N-methyltransferase 2	ENSMUST00000078061.13|Ehmt2|ENSMUSG00000013787.16|euchromatic histone lysine N-methyltransferase 2
mm39_v1_chr2_-_179684194_179684231	0.0250181	Sox2	ENSMUST00000129529.9|Psma7|ENSMUSG00000027566.16|proteasome subunit alpha 7	ENSMUST00000029082.9|Psma7|ENSMUSG00000027566.16|proteasome subunit alpha 7
mm39_v1_chr5_-_134485430_134485653	0.0239604	Sox2	ENSMUST00000200944.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000202280.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000074114.12|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100654.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100650.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000111245.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000202554.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000073161.12|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100652.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000171794.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000167084.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1
mm39_v1_chr9_-_24685572_24685599	0.0227101	Sox2	ENSMUST00000052946.12|Tbx20|ENSMUSG00000031965.16|T-box 20	ENSMUST00000166018.4|Tbx20|ENSMUSG00000031965.16|T-box 20
mm39_v1_chr16_-_31094095_31094109	0.021038	Sox2	ENSMUST00000060188.14|Ppp1r2|ENSMUSG00000047714.15|protein phosphatase 1, regulatory inhibitor subunit 2
mm39_v1_chr2_-_30364219_30364239	0.0193965	Sox2	ENSMUST00000065134.4|Ier5l|ENSMUSG00000089762.4|immediate early response 5-like
mm39_v1_chr15_-_44291699_44291733	0.0141347	Sox2	ENSMUST00000038719.8|Nudcd1|ENSMUSG00000038736.11|NudC domain containing 1
mm39_v1_chr10_+_69761784_69761963	0.0140025	Sox2	ENSMUST00000181974.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000182795.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000182437.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chrX_+_135723531_135723548	0.0101298	Sox2	ENSMUST00000113085.2|Plp1|ENSMUSG00000031425.16|proteolipid protein (myelin) 1
mm39_v1_chr8_+_107141948_107142028	0.00857688	Sox2	ENSMUST00000034382.8|Zfp90|ENSMUSG00000031907.10|zinc finger protein 90	ENSMUST00000212606.2|Zfp90|ENSMUSG00000031907.10|zinc finger protein 90
mm39_v1_chr16_+_84571011_84571033	0.00832819	Sox2	ENSMUST00000114195.8|Jam2|ENSMUSG00000053062.17|junction adhesion molecule 2
mm39_v1_chr10_-_30531768_30531807	0.00565897	Sox2	ENSMUST00000092610.12|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr19_+_6928111_6928138	0.00381071	Sox2	ENSMUST00000145463.2|Bad|ENSMUSG00000024959.15|BCL2-associated agonist of cell death
