mm39_v1_chrX_-_7834057_7834149	3.8383	Thra	ENSMUST00000033502.14|Gata1|ENSMUSG00000031162.15|GATA binding protein 1
mm39_v1_chr9_+_110848339_110848378	3.71873	Thra	ENSMUST00000198884.5|Ltf|ENSMUSG00000032496.8|lactotransferrin	ENSMUST00000196777.5|Ltf|ENSMUSG00000032496.8|lactotransferrin	ENSMUST00000196209.5|Ltf|ENSMUSG00000032496.8|lactotransferrin	ENSMUST00000035077.8|Ltf|ENSMUSG00000032496.8|lactotransferrin	ENSMUST00000196122.3|Ltf|ENSMUSG00000032496.8|lactotransferrin
mm39_v1_chr1_-_84817022_84817042	2.70504	Thra	ENSMUST00000189496.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12	ENSMUST00000027421.13|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12	ENSMUST00000186894.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr2_+_131028861_131028891	2.67369	Thra	ENSMUST00000028804.15|Cdc25b|ENSMUSG00000027330.17|cell division cycle 25B	ENSMUST00000079857.9|Cdc25b|ENSMUSG00000027330.17|cell division cycle 25B
mm39_v1_chr11_-_70146156_70146179	2.53409	Thra	ENSMUST00000108574.3|Alox12|ENSMUSG00000000320.11|arachidonate 12-lipoxygenase	ENSMUST00000000329.9|Alox12|ENSMUSG00000000320.11|arachidonate 12-lipoxygenase
mm39_v1_chr4_+_44300876_44300938	2.40131	Thra	ENSMUST00000045607.12|Melk|ENSMUSG00000035683.14|maternal embryonic leucine zipper kinase
mm39_v1_chr13_+_95833359_95833376	1.79002	Thra	ENSMUST00000022182.5|F2rl2|ENSMUSG00000021675.5|coagulation factor II (thrombin) receptor-like 2
mm39_v1_chrX_-_142610371_142610410	1.78739	Thra	ENSMUST00000087316.6|Capn6|ENSMUSG00000067276.6|calpain 6
mm39_v1_chr15_+_73595012_73595027	1.61666	Thra	ENSMUST00000230044.2|Ptp4a3|ENSMUSG00000059895.14|protein tyrosine phosphatase 4a3
mm39_v1_chr15_+_73594965_73595001	1.61651	Thra	ENSMUST00000165541.8|Ptp4a3|ENSMUSG00000059895.14|protein tyrosine phosphatase 4a3	ENSMUST00000167582.8|Ptp4a3|ENSMUSG00000059895.14|protein tyrosine phosphatase 4a3
mm39_v1_chr7_+_141995545_141995562	1.57075	Thra	ENSMUST00000105971.8|Tnni2|ENSMUSG00000031097.16|troponin I, skeletal, fast 2	ENSMUST00000145287.8|Tnni2|ENSMUSG00000031097.16|troponin I, skeletal, fast 2
mm39_v1_chr16_-_19801781_19801788	1.54877	Thra	ENSMUST00000058839.10|Klhl6|ENSMUSG00000043008.10|kelch-like 6
mm39_v1_chr19_-_46033353_46033724	1.52599	Thra	ENSMUST00000026252.14|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000156585.9|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000185355.7|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000152946.8|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chr5_+_110987839_110987888	1.34335	Thra	ENSMUST00000200172.2|Chek2|ENSMUSG00000029521.8|checkpoint kinase 2	ENSMUST00000066160.3|Chek2|ENSMUSG00000029521.8|checkpoint kinase 2
mm39_v1_chr10_-_62363217_62363241	1.31808	Thra	ENSMUST00000160987.8|Srgn|ENSMUSG00000020077.15|serglycin
mm39_v1_chrX_-_56384089_56384140	1.2854	Thra	ENSMUST00000033468.11|Arhgef6|ENSMUSG00000031133.13|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm39_v1_chr6_+_86605146_86605190	1.2632	Thra	ENSMUST00000043400.9|Asprv1|ENSMUSG00000033508.9|aspartic peptidase, retroviral-like 1
mm39_v1_chr7_+_28140352_28140370	1.22023	Thra	ENSMUST00000078845.13|Gmfg|ENSMUSG00000060791.16|glia maturation factor, gamma
mm39_v1_chr1_-_134006847_134006862	1.19744	Thra	ENSMUST00000020692.7|Btg2|ENSMUSG00000020423.7|BTG anti-proliferation factor 2
mm39_v1_chr17_-_71575584_71575598	1.18596	Thra	ENSMUST00000233148.2|Emilin2|ENSMUSG00000024053.12|elastin microfibril interfacer 2
mm39_v1_chr11_-_40624200_40624269	1.17596	Thra	ENSMUST00000020579.9|Hmmr|ENSMUSG00000020330.17|hyaluronan mediated motility receptor (RHAMM)
mm39_v1_chr5_-_110987604_110987653	1.17417	Thra	ENSMUST00000056937.12|Hscb|ENSMUSG00000043510.13|HscB iron-sulfur cluster co-chaperone
mm39_v1_chr11_+_97340962_97341008	1.16992	Thra	ENSMUST00000107601.8|Arhgap23|ENSMUSG00000049807.17|Rho GTPase activating protein 23
mm39_v1_chr1_-_170886924_170886972	1.16377	Thra	ENSMUST00000164044.8|Fcgr3|ENSMUSG00000059498.14|Fc receptor, IgG, low affinity III	ENSMUST00000169017.8|Fcgr3|ENSMUSG00000059498.14|Fc receptor, IgG, low affinity III
mm39_v1_chr6_+_120813162_120813197	1.14076	Thra	ENSMUST00000203584.3|Bcl2l13|ENSMUSG00000009112.5|BCL2-like 13 (apoptosis facilitator)	ENSMUST00000203037.3|Bcl2l13|ENSMUSG00000009112.5|BCL2-like 13 (apoptosis facilitator)
mm39_v1_chr1_+_172327569_172327614	1.11711	Thra	ENSMUST00000111230.8|Tagln2|ENSMUSG00000026547.16|transgelin 2
mm39_v1_chr4_-_156340276_156340404	1.06725	Thra	ENSMUST00000220228.2|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11	ENSMUST00000218788.2|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11	ENSMUST00000179919.3|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11
mm39_v1_chr6_+_120813199_120813218	1.05408	Thra	ENSMUST00000009256.4|Bcl2l13|ENSMUSG00000009112.5|BCL2-like 13 (apoptosis facilitator)
mm39_v1_chr7_+_19144950_19145026	1.01685	Thra	ENSMUST00000208710.2|Ckm|ENSMUSG00000030399.3|creatine kinase, muscle	ENSMUST00000003643.3|Ckm|ENSMUSG00000030399.3|creatine kinase, muscle
mm39_v1_chr1_-_170133901_170133901	0.994088	Thra	ENSMUST00000179801.3|Gm7694|ENSMUSG00000102752.2|predicted gene 7694
mm39_v1_chr11_+_69856222_69856336	0.990683	Thra	ENSMUST00000018713.13|Cldn7|ENSMUSG00000018569.13|claudin 7
mm39_v1_chr6_+_113508636_113508682	0.981038	Thra	ENSMUST00000036340.12|Fancd2|ENSMUSG00000034023.17|Fanconi anemia, complementation group D2	ENSMUST00000204827.3|Fancd2|ENSMUSG00000034023.17|Fanconi anemia, complementation group D2
mm39_v1_chr15_-_78413816_78413837	0.931918	Thra	ENSMUST00000023075.9|C1qtnf6|ENSMUSG00000022440.10|C1q and tumor necrosis factor related protein 6
mm39_v1_chr17_+_48571298_48571401	0.920755	Thra	ENSMUST00000059873.14|Treml4|ENSMUSG00000051682.16|triggering receptor expressed on myeloid cells-like 4	ENSMUST00000154335.8|Treml4|ENSMUSG00000051682.16|triggering receptor expressed on myeloid cells-like 4	ENSMUST00000136272.8|Treml4|ENSMUSG00000051682.16|triggering receptor expressed on myeloid cells-like 4	ENSMUST00000125426.8|Treml4|ENSMUSG00000051682.16|triggering receptor expressed on myeloid cells-like 4	ENSMUST00000153420.2|Treml4|ENSMUSG00000051682.16|triggering receptor expressed on myeloid cells-like 4
mm39_v1_chr4_+_94627513_94627537	0.918122	Thra	ENSMUST00000073939.13|Tek|ENSMUSG00000006386.16|TEK receptor tyrosine kinase	ENSMUST00000102798.8|Tek|ENSMUSG00000006386.16|TEK receptor tyrosine kinase
mm39_v1_chr8_+_72889073_72889108	0.913346	Thra	ENSMUST00000003575.11|Tpm4|ENSMUSG00000031799.11|tropomyosin 4
mm39_v1_chr4_-_62278761_62278790	0.906091	Thra	ENSMUST00000107461.2|Fkbp15|ENSMUSG00000066151.13|FK506 binding protein 15	ENSMUST00000084528.10|Fkbp15|ENSMUSG00000066151.13|FK506 binding protein 15
mm39_v1_chr13_+_20274708_20274803	0.897228	Thra	ENSMUST00000072519.7|Elmo1|ENSMUSG00000041112.18|engulfment and cell motility 1
mm39_v1_chr4_-_126096376_126096510	0.892187	Thra	ENSMUST00000106142.8|Thrap3|ENSMUSG00000043962.17|thyroid hormone receptor associated protein 3	ENSMUST00000169403.8|Thrap3|ENSMUSG00000043962.17|thyroid hormone receptor associated protein 3	ENSMUST00000130334.2|Thrap3|ENSMUSG00000043962.17|thyroid hormone receptor associated protein 3
mm39_v1_chr7_+_28140450_28140489	0.888702	Thra	ENSMUST00000135686.2|Gmfg|ENSMUSG00000060791.16|glia maturation factor, gamma
mm39_v1_chr4_-_41275091_41275144	0.887898	Thra	ENSMUST00000030143.13|Ubap2|ENSMUSG00000028433.15|ubiquitin-associated protein 2	ENSMUST00000108068.8|Ubap2|ENSMUSG00000028433.15|ubiquitin-associated protein 2
mm39_v1_chr4_-_137493785_137493814	0.887102	Thra	ENSMUST00000139951.8|Alpl|ENSMUSG00000028766.11|alkaline phosphatase, liver/bone/kidney
mm39_v1_chr1_-_84817000_84817011	0.865546	Thra	ENSMUST00000186648.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr3_+_96736774_96736790	0.846658	Thra	ENSMUST00000138014.8|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1
mm39_v1_chr3_+_96079642_96079653	0.838578	Thra	ENSMUST00000076372.5|Sf3b4|ENSMUSG00000068856.4|splicing factor 3b, subunit 4
mm39_v1_chr3_+_96736600_96736752	0.838453	Thra	ENSMUST00000135031.8|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1
mm39_v1_chr8_+_121264161_121264210	0.838172	Thra	ENSMUST00000118136.2|Gse1|ENSMUSG00000031822.21|genetic suppressor element 1, coiled-coil protein
mm39_v1_chr4_-_156340713_156340738	0.836555	Thra	ENSMUST00000219393.2|Samd11|ENSMUSG00000096351.3|sterile alpha motif domain containing 11
mm39_v1_chr3_+_95071617_95071685	0.834358	Thra	ENSMUST00000168321.8|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000107217.6|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000202315.3|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm39_v1_chr7_+_3339077_3339111	0.829444	Thra	ENSMUST00000203566.3|Myadm|ENSMUSG00000068566.14|myeloid-associated differentiation marker
mm39_v1_chr1_-_163822336_163822377	0.828845	Thra	ENSMUST00000097493.10|BC055324|ENSMUSG00000041406.15|cDNA sequence BC055324	ENSMUST00000045876.8|BC055324|ENSMUSG00000041406.15|cDNA sequence BC055324
mm39_v1_chr16_-_18904240_18904256	0.820654	Thra	ENSMUST00000103746.3|Iglv1|ENSMUSG00000076934.3|immunoglobulin lambda variable 1
mm39_v1_chr15_-_78413780_78413806	0.816526	Thra	ENSMUST00000229185.2|C1qtnf6|ENSMUSG00000022440.10|C1q and tumor necrosis factor related protein 6
mm39_v1_chr13_+_55357585_55357602	0.808253	Thra	ENSMUST00000224973.2|Nsd1|ENSMUSG00000021488.9|nuclear receptor-binding SET-domain protein 1	ENSMUST00000099490.3|Nsd1|ENSMUSG00000021488.9|nuclear receptor-binding SET-domain protein 1
mm39_v1_chr10_-_87982732_87982803	0.803901	Thra	ENSMUST00000164121.8|Parpbp|ENSMUSG00000035365.16|PARP1 binding protein	ENSMUST00000164803.2|Parpbp|ENSMUSG00000035365.16|PARP1 binding protein	ENSMUST00000168163.8|Parpbp|ENSMUSG00000035365.16|PARP1 binding protein	ENSMUST00000048518.16|Parpbp|ENSMUSG00000035365.16|PARP1 binding protein
mm39_v1_chr7_+_3339059_3339074	0.775703	Thra	ENSMUST00000096744.8|Myadm|ENSMUSG00000068566.14|myeloid-associated differentiation marker
mm39_v1_chr4_-_140501507_140501547	0.755674	Thra	ENSMUST00000026381.7|Padi4|ENSMUSG00000025330.7|peptidyl arginine deiminase, type IV
mm39_v1_chr6_+_136509922_136509937	0.753736	Thra	ENSMUST00000187429.4|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr16_+_32250043_32250067	0.730815	Thra	ENSMUST00000115140.2|Pcyt1a|ENSMUSG00000005615.16|phosphate cytidylyltransferase 1, choline, alpha isoform	ENSMUST00000104893.10|Pcyt1a|ENSMUSG00000005615.16|phosphate cytidylyltransferase 1, choline, alpha isoform
mm39_v1_chr4_-_49597837_49597876	0.715892	Thra	ENSMUST00000042750.3|Pgap4|ENSMUSG00000039611.3|post-GPI attachment to proteins GalNAc transferase 4
mm39_v1_chr4_+_33310306_33310374	0.709932	Thra	ENSMUST00000108153.9|Rngtt|ENSMUSG00000028274.18|RNA guanylyltransferase and 5'-phosphatase	ENSMUST00000029942.8|Rngtt|ENSMUSG00000028274.18|RNA guanylyltransferase and 5'-phosphatase
mm39_v1_chr19_-_6835538_6835588	0.699034	Thra	ENSMUST00000113440.2|Ccdc88b|ENSMUSG00000047810.10|coiled-coil domain containing 88B
mm39_v1_chr14_-_73563212_73563276	0.698626	Thra	ENSMUST00000022701.7|Rb1|ENSMUSG00000022105.7|RB transcriptional corepressor 1
mm39_v1_chr5_-_110987441_110987600	0.698382	Thra	ENSMUST00000145318.2|Hscb|ENSMUSG00000043510.13|HscB iron-sulfur cluster co-chaperone
mm39_v1_chr1_+_152683627_152683649	0.673294	Thra	ENSMUST00000027754.7|Ncf2|ENSMUSG00000026480.13|neutrophil cytosolic factor 2
mm39_v1_chr5_-_74226394_74226419	0.672289	Thra	ENSMUST00000145016.3|Usp46|ENSMUSG00000054814.15|ubiquitin specific peptidase 46
mm39_v1_chr7_-_100164007_100164167	0.666255	Thra	ENSMUST00000207405.2|Dnajb13|ENSMUSG00000030708.15|DnaJ heat shock protein family (Hsp40) member B13
mm39_v1_chr11_+_31822211_31822263	0.652165	Thra	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr11_+_44409775_44409827	0.635673	Thra	ENSMUST00000019333.10|Rnf145|ENSMUSG00000019189.14|ring finger protein 145
mm39_v1_chr4_-_144921567_144921614	0.615638	Thra	ENSMUST00000036579.14|Vps13d|ENSMUSG00000020220.17|vacuolar protein sorting 13D
mm39_v1_chr7_+_26958150_26958240	0.606548	Thra	ENSMUST00000079258.7|Numbl|ENSMUSG00000063160.13|numb-like
mm39_v1_chr11_+_72332167_72332212	0.605163	Thra	ENSMUST00000045633.6|Mybbp1a|ENSMUSG00000040463.17|MYB binding protein (P160) 1a
mm39_v1_chr11_+_4936824_4936894	0.589607	Thra	ENSMUST00000109897.8|Ap1b1|ENSMUSG00000009090.18|adaptor protein complex AP-1, beta 1 subunit	ENSMUST00000009234.16|Ap1b1|ENSMUSG00000009090.18|adaptor protein complex AP-1, beta 1 subunit
mm39_v1_chr4_-_135000109_135000130	0.576696	Thra	ENSMUST00000037099.9|Clic4|ENSMUSG00000037242.9|chloride intracellular channel 4 (mitochondrial)
mm39_v1_chr18_+_60907668_60907697	0.57436	Thra	ENSMUST00000025511.11|Rps14|ENSMUSG00000024608.12|ribosomal protein S14
mm39_v1_chr1_+_152683568_152683623	0.564778	Thra	ENSMUST00000190323.7|Ncf2|ENSMUSG00000026480.13|neutrophil cytosolic factor 2
mm39_v1_chr15_+_65682066_65682083	0.56394	Thra	ENSMUST00000211878.2|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A
mm39_v1_chr14_+_25459690_25459721	0.548075	Thra	ENSMUST00000007961.15|Zmiz1|ENSMUSG00000007817.16|zinc finger, MIZ-type containing 1
mm39_v1_chr8_-_106434565_106434565	0.539298	Thra	ENSMUST00000013299.11|Enkd1|ENSMUSG00000013155.11|enkurin domain containing 1
mm39_v1_chr15_+_34083450_34083468	0.531305	Thra	ENSMUST00000163333.9|Mtdh|ENSMUSG00000022255.17|metadherin	ENSMUST00000170050.8|Mtdh|ENSMUSG00000022255.17|metadherin	ENSMUST00000170553.8|Mtdh|ENSMUSG00000022255.17|metadherin
mm39_v1_chr18_+_60907698_60907753	0.529278	Thra	ENSMUST00000118551.8|Rps14|ENSMUSG00000024608.12|ribosomal protein S14
mm39_v1_chr11_-_29497819_29497880	0.521575	Thra	ENSMUST00000102844.4|Rps27a|ENSMUSG00000020460.16|ribosomal protein S27A
mm39_v1_chr7_+_18817767_18817884	0.517092	Thra	ENSMUST00000032568.14|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000122999.8|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000108473.10|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000108474.2|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000238982.2|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase
mm39_v1_chr7_+_79674562_79674589	0.498185	Thra	ENSMUST00000164056.9|Zfp710|ENSMUSG00000048897.16|zinc finger protein 710	ENSMUST00000166250.8|Zfp710|ENSMUSG00000048897.16|zinc finger protein 710
mm39_v1_chr1_+_134121170_134121195	0.48467	Thra	ENSMUST00000038445.13|Mybph|ENSMUSG00000042451.13|myosin binding protein H	ENSMUST00000191577.2|Mybph|ENSMUSG00000042451.13|myosin binding protein H
mm39_v1_chr11_+_75541324_75541370	0.475081	Thra	ENSMUST00000102505.10|Myo1c|ENSMUSG00000017774.20|myosin IC
mm39_v1_chr3_+_122522592_122522652	0.471631	Thra	ENSMUST00000066728.10|Pde5a|ENSMUSG00000053965.11|phosphodiesterase 5A, cGMP-specific
mm39_v1_chr1_-_84817976_84818060	0.442152	Thra	ENSMUST00000190067.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr16_-_23339329_23339409	0.441341	Thra	ENSMUST00000230040.2|Masp1|ENSMUSG00000022887.10|mannan-binding lectin serine peptidase 1	ENSMUST00000229619.2|Masp1|ENSMUSG00000022887.10|mannan-binding lectin serine peptidase 1
mm39_v1_chr4_-_49597425_49597490	0.440669	Thra	ENSMUST00000150664.2|Pgap4|ENSMUSG00000039611.3|post-GPI attachment to proteins GalNAc transferase 4
mm39_v1_chr10_-_7556881_7556936	0.434737	Thra	ENSMUST00000159977.2|Pcmt1|ENSMUSG00000019795.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	ENSMUST00000162682.8|Pcmt1|ENSMUSG00000019795.18|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm39_v1_chr14_-_55344004_55344052	0.425469	Thra	ENSMUST00000036041.15|Ap1g2|ENSMUSG00000040701.17|adaptor protein complex AP-1, gamma 2 subunit
mm39_v1_chr7_+_12656217_12656364	0.425452	Thra	ENSMUST00000108539.8|Rps5|ENSMUSG00000012848.16|ribosomal protein S5	ENSMUST00000004554.14|Rps5|ENSMUSG00000012848.16|ribosomal protein S5	ENSMUST00000147435.8|Rps5|ENSMUSG00000012848.16|ribosomal protein S5	ENSMUST00000137329.4|Rps5|ENSMUSG00000012848.16|ribosomal protein S5
mm39_v1_chr15_-_82796308_82796390	0.424399	Thra	ENSMUST00000109510.10|Tcf20|ENSMUSG00000041852.16|transcription factor 20	ENSMUST00000048966.7|Tcf20|ENSMUSG00000041852.16|transcription factor 20
mm39_v1_chr4_-_126096551_126096554	0.421121	Thra	ENSMUST00000080919.12|Thrap3|ENSMUSG00000043962.17|thyroid hormone receptor associated protein 3
mm39_v1_chr15_+_99600149_99600196	0.418879	Thra	ENSMUST00000229236.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr2_+_112096154_112096204	0.417819	Thra	ENSMUST00000110991.9|Slc12a6|ENSMUSG00000027130.16|solute carrier family 12, member 6
mm39_v1_chr10_-_79940168_79940210	0.416575	Thra	ENSMUST00000219260.2|Sbno2|ENSMUSG00000035673.11|strawberry notch 2
mm39_v1_chr11_-_85030761_85030864	0.406503	Thra	ENSMUST00000108075.9|Usp32|ENSMUSG00000000804.15|ubiquitin specific peptidase 32
mm39_v1_chr5_+_33021042_33021130	0.404158	Thra	ENSMUST00000149350.8|Depdc5|ENSMUSG00000037426.19|DEP domain containing 5	ENSMUST00000118698.8|Depdc5|ENSMUSG00000037426.19|DEP domain containing 5	ENSMUST00000150130.8|Depdc5|ENSMUSG00000037426.19|DEP domain containing 5	ENSMUST00000049780.13|Depdc5|ENSMUSG00000037426.19|DEP domain containing 5	ENSMUST00000087897.11|Depdc5|ENSMUSG00000037426.19|DEP domain containing 5	ENSMUST00000119705.8|Depdc5|ENSMUSG00000037426.19|DEP domain containing 5	ENSMUST00000125574.8|Depdc5|ENSMUSG00000037426.19|DEP domain containing 5
mm39_v1_chr5_+_34527230_34527323	0.402689	Thra	ENSMUST00000180376.8|Fam193a|ENSMUSG00000037210.17|family with sequence homology 193, member A
mm39_v1_chr4_-_58912678_58912776	0.40168	Thra	ENSMUST00000144512.8|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold	ENSMUST00000102889.10|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold	ENSMUST00000055822.15|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold
mm39_v1_chr17_+_64203017_64203059	0.392837	Thra	ENSMUST00000000129.14|Fer|ENSMUSG00000000127.16|fer (fms/fps related) protein kinase
mm39_v1_chr3_+_113824181_113824220	0.390167	Thra	ENSMUST00000123619.8|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1	ENSMUST00000092155.12|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1
mm39_v1_chr1_-_152262425_152262436	0.386458	Thra	ENSMUST00000015124.15|Tsen15|ENSMUSG00000014980.15|tRNA splicing endonuclease subunit 15
mm39_v1_chrX_-_12026594_12026719	0.376556	Thra	ENSMUST00000043441.13|Bcor|ENSMUSG00000040363.16|BCL6 interacting corepressor
mm39_v1_chrX_+_98086187_98086220	0.373737	Thra	ENSMUST00000036606.14|Stard8|ENSMUSG00000031216.14|START domain containing 8
mm39_v1_chr14_+_25459630_25459651	0.359727	Thra	ENSMUST00000162645.8|Zmiz1|ENSMUSG00000007817.16|zinc finger, MIZ-type containing 1
mm39_v1_chr14_+_79718604_79718634	0.350875	Thra	ENSMUST00000040131.13|Elf1|ENSMUSG00000036461.17|E74-like factor 1
mm39_v1_chr3_-_94693780_94693826	0.346749	Thra	ENSMUST00000107273.9|Cgn|ENSMUSG00000068876.17|cingulin	ENSMUST00000238849.2|Cgn|ENSMUSG00000068876.17|cingulin
mm39_v1_chr14_-_79718890_79718960	0.339087	Thra	ENSMUST00000022601.7|Wbp4|ENSMUSG00000022023.7|WW domain binding protein 4
mm39_v1_chr4_-_141327146_141327235	0.326464	Thra	ENSMUST00000141518.8|Fblim1|ENSMUSG00000006219.13|filamin binding LIM protein 1	ENSMUST00000127455.8|Fblim1|ENSMUSG00000006219.13|filamin binding LIM protein 1	ENSMUST00000105784.8|Fblim1|ENSMUSG00000006219.13|filamin binding LIM protein 1
mm39_v1_chr5_-_123804745_123804758	0.325576	Thra	ENSMUST00000149410.2|Clip1|ENSMUSG00000049550.18|CAP-GLY domain containing linker protein 1
mm39_v1_chr9_+_107784065_107784116	0.317585	Thra	ENSMUST00000035203.9|Mst1r|ENSMUSG00000032584.13|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
mm39_v1_chr15_+_78314251_78314327	0.315748	Thra	ENSMUST00000229622.2|Kctd17|ENSMUSG00000033287.17|potassium channel tetramerisation domain containing 17	ENSMUST00000162808.2|Kctd17|ENSMUSG00000033287.17|potassium channel tetramerisation domain containing 17
mm39_v1_chr16_+_91282121_91282182	0.312281	Thra	ENSMUST00000023689.11|Ifnar1|ENSMUSG00000022967.14|interferon (alpha and beta) receptor 1	ENSMUST00000117748.8|Ifnar1|ENSMUSG00000022967.14|interferon (alpha and beta) receptor 1
mm39_v1_chr16_+_32249713_32249799	0.309165	Thra	ENSMUST00000115137.8|Pcyt1a|ENSMUSG00000005615.16|phosphate cytidylyltransferase 1, choline, alpha isoform	ENSMUST00000079791.11|Pcyt1a|ENSMUSG00000005615.16|phosphate cytidylyltransferase 1, choline, alpha isoform
mm39_v1_chr3_+_95067759_95067817	0.307738	Thra	ENSMUST00000131742.8|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000090823.8|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	ENSMUST00000090821.10|Sema6c|ENSMUSG00000038777.20|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm39_v1_chr11_+_83741657_83741681	0.306437	Thra	ENSMUST00000021016.10|Hnf1b|ENSMUSG00000020679.12|HNF1 homeobox B
mm39_v1_chr15_-_98063441_98063470	0.30582	Thra	ENSMUST00000123922.2|Asb8|ENSMUSG00000048175.14|ankyrin repeat and SOCS box-containing 8
mm39_v1_chrX_+_168468186_168468246	0.303541	Thra	ENSMUST00000112107.8|Mid1|ENSMUSG00000035299.17|midline 1	ENSMUST00000112104.8|Mid1|ENSMUSG00000035299.17|midline 1
mm39_v1_chr11_+_83741689_83741707	0.297862	Thra	ENSMUST00000108114.9|Hnf1b|ENSMUSG00000020679.12|HNF1 homeobox B
mm39_v1_chr4_-_41048124_41048140	0.294103	Thra	ENSMUST00000030136.13|Aqp7|ENSMUSG00000028427.14|aquaporin 7
mm39_v1_chr16_+_72460029_72460077	0.28736	Thra	ENSMUST00000023600.8|Robo1|ENSMUSG00000022883.12|roundabout guidance receptor 1
mm39_v1_chr1_-_134162231_134162316	0.286795	Thra	ENSMUST00000169927.2|Adora1|ENSMUSG00000042429.9|adenosine A1 receptor
mm39_v1_chr18_+_82932747_82932788	0.285152	Thra	ENSMUST00000071233.7|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chrX_+_100492684_100492697	0.284433	Thra	ENSMUST00000033674.6|Itgb1bp2|ENSMUSG00000031312.6|integrin beta 1 binding protein 2
mm39_v1_chr11_+_115366470_115366553	0.284335	Thra	ENSMUST00000035240.7|Armc7|ENSMUSG00000057219.12|armadillo repeat containing 7
mm39_v1_chr18_+_35987733_35987769	0.284168	Thra	ENSMUST00000235337.2|Cxxc5|ENSMUSG00000046668.10|CXXC finger 5
mm39_v1_chr1_-_152262339_152262363	0.283736	Thra	ENSMUST00000162371.2|Tsen15|ENSMUSG00000014980.15|tRNA splicing endonuclease subunit 15
mm39_v1_chr17_-_32607859_32608090	0.280104	Thra	ENSMUST00000087703.12|Wiz|ENSMUSG00000024050.19|widely-interspaced zinc finger motifs	ENSMUST00000170603.3|Wiz|ENSMUSG00000024050.19|widely-interspaced zinc finger motifs
mm39_v1_chr2_+_22785534_22785581	0.279515	Thra	ENSMUST00000053729.14|Pdss1|ENSMUSG00000026784.15|prenyl (solanesyl) diphosphate synthase, subunit 1
mm39_v1_chr10_+_126814542_126814618	0.275893	Thra	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr11_+_70655035_70655035	0.275759	Thra	ENSMUST00000060444.6|Zfp3|ENSMUSG00000043602.6|zinc finger protein 3
mm39_v1_chr12_-_40087393_40087428	0.271063	Thra	ENSMUST00000146905.2|Arl4a|ENSMUSG00000047446.19|ADP-ribosylation factor-like 4A
mm39_v1_chrX_-_52357897_52357946	0.266906	Thra	ENSMUST00000114838.8|Fam122b|ENSMUSG00000036022.16|family with sequence similarity 122, member B
mm39_v1_chr5_-_134975773_134975789	0.26565	Thra	ENSMUST00000051401.4|Cldn4|ENSMUSG00000047501.4|claudin 4
mm39_v1_chr18_+_9957906_9957987	0.265332	Thra	ENSMUST00000025137.9|Thoc1|ENSMUSG00000024287.9|THO complex 1
mm39_v1_chr2_-_34716199_34716252	0.263846	Thra	ENSMUST00000113075.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000113080.9|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000091020.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr18_-_64794338_64794338	0.260509	Thra	ENSMUST00000025482.10|Atp8b1|ENSMUSG00000039529.10|ATPase, class I, type 8B, member 1
mm39_v1_chr12_+_117480099_117480148	0.259132	Thra	ENSMUST00000109691.4|Rapgef5|ENSMUSG00000041992.10|Rap guanine nucleotide exchange factor (GEF) 5
mm39_v1_chr19_+_31846154_31846187	0.258233	Thra	ENSMUST00000224564.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000224304.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000075838.8|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor	ENSMUST00000224400.2|A1cf|ENSMUSG00000052595.9|APOBEC1 complementation factor
mm39_v1_chr12_+_78908466_78908593	0.250876	Thra	ENSMUST00000071230.8|Eif2s1|ENSMUSG00000021116.11|eukaryotic translation initiation factor 2, subunit 1 alpha
mm39_v1_chr11_+_120348919_120348973	0.250244	Thra	ENSMUST00000058370.14|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137	ENSMUST00000175970.8|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137	ENSMUST00000176120.2|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137
mm39_v1_chr17_+_23898223_23898351	0.249329	Thra	ENSMUST00000024699.4|Cldn6|ENSMUSG00000023906.4|claudin 6	ENSMUST00000232719.2|Cldn6|ENSMUSG00000023906.4|claudin 6
mm39_v1_chr2_-_65069383_65069440	0.248884	Thra	ENSMUST00000155916.8|Cobll1|ENSMUSG00000034903.19|Cobl-like 1	ENSMUST00000156643.2|Cobll1|ENSMUSG00000034903.19|Cobl-like 1
mm39_v1_chr4_+_131600918_131600992	0.247611	Thra	ENSMUST00000053819.6|Srsf4|ENSMUSG00000028911.17|serine and arginine-rich splicing factor 4
mm39_v1_chr4_-_141391406_141391470	0.240303	Thra	ENSMUST00000084203.11|Plekhm2|ENSMUSG00000028917.15|pleckstrin homology domain containing, family M (with RUN domain) member 2
mm39_v1_chr6_+_83114020_83114070	0.238072	Thra	ENSMUST00000121093.8|Rtkn|ENSMUSG00000034930.17|rhotekin
mm39_v1_chr19_-_7688628_7688677	0.233299	Thra	ENSMUST00000025666.8|Slc22a19|ENSMUSG00000024757.8|solute carrier family 22 (organic anion transporter), member 19
mm39_v1_chr10_+_7556948_7556990	0.231787	Thra	ENSMUST00000165952.9|Lats1|ENSMUSG00000040021.14|large tumor suppressor
mm39_v1_chr3_+_31150982_31151003	0.228046	Thra	ENSMUST00000118204.2|Skil|ENSMUSG00000027660.17|SKI-like
mm39_v1_chr3_-_95214443_95214492	0.223683	Thra	ENSMUST00000015846.9|Anxa9|ENSMUSG00000015702.14|annexin A9
mm39_v1_chr16_-_31094095_31094109	0.222167	Thra	ENSMUST00000060188.14|Ppp1r2|ENSMUSG00000047714.15|protein phosphatase 1, regulatory inhibitor subunit 2
mm39_v1_chr16_+_91282183_91282224	0.213867	Thra	ENSMUST00000129878.2|Ifnar1|ENSMUSG00000022967.14|interferon (alpha and beta) receptor 1
mm39_v1_chr7_-_126574959_126575095	0.209455	Thra	ENSMUST00000206296.2|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand	ENSMUST00000205437.3|Cdiptos|ENSMUSG00000097075.4|CDIP transferase, opposite strand
mm39_v1_chr11_+_40624763_40624776	0.209319	Thra	ENSMUST00000127382.2|Nudcd2|ENSMUSG00000020328.11|NudC domain containing 2
mm39_v1_chr1_+_159871943_159872024	0.209121	Thra	ENSMUST00000163892.8|4930523C07Rik|ENSMUSG00000090394.9|RIKEN cDNA 4930523C07 gene
mm39_v1_chrX_+_135567124_135567360	0.208653	Thra	ENSMUST00000060904.11|Tceal3|ENSMUSG00000044550.12|transcription elongation factor A (SII)-like 3	ENSMUST00000113100.2|Tceal3|ENSMUSG00000044550.12|transcription elongation factor A (SII)-like 3	ENSMUST00000128040.2|Tceal3|ENSMUSG00000044550.12|transcription elongation factor A (SII)-like 3
mm39_v1_chr13_+_44883270_44883283	0.199963	Thra	ENSMUST00000172830.8|Jarid2|ENSMUSG00000038518.16|jumonji, AT rich interactive domain 2
mm39_v1_chr11_+_97206542_97206734	0.193606	Thra	ENSMUST00000019026.10|Mrpl45|ENSMUSG00000018882.13|mitochondrial ribosomal protein L45	ENSMUST00000132168.2|Mrpl45|ENSMUSG00000018882.13|mitochondrial ribosomal protein L45
mm39_v1_chr8_+_72021567_72021574	0.186771	Thra	ENSMUST00000034267.5|Slc27a1|ENSMUSG00000031808.8|solute carrier family 27 (fatty acid transporter), member 1
mm39_v1_chr15_-_98063493_98063506	0.183475	Thra	ENSMUST00000143400.8|Asb8|ENSMUSG00000048175.14|ankyrin repeat and SOCS box-containing 8
mm39_v1_chr8_+_72021510_72021566	0.183071	Thra	ENSMUST00000212889.2|Slc27a1|ENSMUSG00000031808.8|solute carrier family 27 (fatty acid transporter), member 1
mm39_v1_chr6_+_83114086_83114103	0.181685	Thra	ENSMUST00000087938.11|Rtkn|ENSMUSG00000034930.17|rhotekin
mm39_v1_chrX_+_143902497_143902497	0.179616	Thra	ENSMUST00000096301.5|Rtl4|ENSMUSG00000071679.5|retrotransposon Gag like 4
mm39_v1_chr18_+_65158873_65159029	0.177546	Thra	ENSMUST00000226058.2|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm39_v1_chr8_+_73197718_73197797	0.176793	Thra	ENSMUST00000064853.13|1700030K09Rik|ENSMUSG00000052794.14|RIKEN cDNA 1700030K09 gene	ENSMUST00000121902.2|1700030K09Rik|ENSMUSG00000052794.14|RIKEN cDNA 1700030K09 gene
mm39_v1_chr15_-_74624811_74624895	0.175425	Thra	ENSMUST00000189128.2|Lynx1|ENSMUSG00000022594.15|Ly6/neurotoxin 1	ENSMUST00000023259.15|Lynx1|ENSMUSG00000022594.15|Ly6/neurotoxin 1
mm39_v1_chr2_-_119308094_119308186	0.175189	Thra	ENSMUST00000110808.2|Ino80|ENSMUSG00000034154.16|INO80 complex subunit	ENSMUST00000049920.14|Ino80|ENSMUSG00000034154.16|INO80 complex subunit
mm39_v1_chr10_+_87982854_87982900	0.166047	Thra	ENSMUST00000052355.15|Nup37|ENSMUSG00000035351.17|nucleoporin 37
mm39_v1_chr4_-_139695337_139695337	0.161308	Thra	ENSMUST00000105031.4|Klhdc7a|ENSMUSG00000078234.7|kelch domain containing 7A
mm39_v1_chr12_+_102435383_102435405	0.158301	Thra	ENSMUST00000179218.9|Golga5|ENSMUSG00000021192.17|golgi autoantigen, golgin subfamily a, 5
mm39_v1_chr19_-_46315543_46315595	0.155378	Thra	ENSMUST00000223917.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000224447.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000041391.5|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000096029.12|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing
mm39_v1_chr10_+_87982916_87982940	0.154809	Thra	ENSMUST00000169309.3|Nup37|ENSMUSG00000035351.17|nucleoporin 37
mm39_v1_chr12_+_102435425_102435451	0.15462	Thra	ENSMUST00000021609.10|Golga5|ENSMUSG00000021192.17|golgi autoantigen, golgin subfamily a, 5
mm39_v1_chr3_+_86131970_86132025	0.151768	Thra	ENSMUST00000192145.6|Lrba|ENSMUSG00000028080.17|LPS-responsive beige-like anchor	ENSMUST00000194759.6|Lrba|ENSMUSG00000028080.17|LPS-responsive beige-like anchor	ENSMUST00000107635.7|Lrba|ENSMUSG00000028080.17|LPS-responsive beige-like anchor
mm39_v1_chr3_+_122523219_122523384	0.14885	Thra	ENSMUST00000200389.2|Pde5a|ENSMUSG00000053965.11|phosphodiesterase 5A, cGMP-specific
mm39_v1_chr3_+_108191398_108191458	0.142348	Thra	ENSMUST00000135636.6|Sort1|ENSMUSG00000068747.15|sortilin 1	ENSMUST00000102632.7|Sort1|ENSMUSG00000068747.15|sortilin 1
mm39_v1_chr7_+_24990596_24990634	0.133386	Thra	ENSMUST00000164820.2|Cic|ENSMUSG00000005442.14|capicua transcriptional repressor
mm39_v1_chr4_+_126042250_126042325	0.133209	Thra	ENSMUST00000106150.3|Eva1b|ENSMUSG00000050212.5|eva-1 homolog B (C. elegans)
mm39_v1_chr12_-_98703664_98703774	0.129393	Thra	ENSMUST00000170188.8|Ptpn21|ENSMUSG00000021009.16|protein tyrosine phosphatase, non-receptor type 21
mm39_v1_chr1_-_181985663_181985663	0.127845	Thra	ENSMUST00000169123.4|Vmn1r1|ENSMUSG00000091013.4|vomeronasal 1 receptor 1
mm39_v1_chr7_+_100122192_100122205	0.127047	Thra	ENSMUST00000032958.14|Ucp3|ENSMUSG00000032942.15|uncoupling protein 3 (mitochondrial, proton carrier)	ENSMUST00000107059.2|Ucp3|ENSMUSG00000032942.15|uncoupling protein 3 (mitochondrial, proton carrier)
mm39_v1_chr7_-_125799570_125799581	0.126845	Thra	ENSMUST00000009344.16|Xpo6|ENSMUSG00000000131.16|exportin 6
mm39_v1_chr4_-_128856213_128856242	0.125673	Thra	ENSMUST00000119354.8|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2	ENSMUST00000106068.8|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2	ENSMUST00000030581.10|Azin2|ENSMUSG00000028789.17|antizyme inhibitor 2
mm39_v1_chr6_+_115337899_115337925	0.122383	Thra	ENSMUST00000171644.8|Pparg|ENSMUSG00000000440.13|peroxisome proliferator activated receptor gamma
mm39_v1_chr18_+_42408418_42408457	0.117274	Thra	ENSMUST00000091920.6|Rbm27|ENSMUSG00000024491.17|RNA binding motif protein 27	ENSMUST00000046972.14|Rbm27|ENSMUSG00000024491.17|RNA binding motif protein 27	ENSMUST00000236240.2|Rbm27|ENSMUSG00000024491.17|RNA binding motif protein 27
mm39_v1_chr15_+_99600475_99600537	0.114693	Thra	ENSMUST00000228984.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	ENSMUST00000229845.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr5_+_53747556_53747725	0.110052	Thra	ENSMUST00000037618.13|Rbpj|ENSMUSG00000039191.13|recombination signal binding protein for immunoglobulin kappa J region	ENSMUST00000201912.4|Rbpj|ENSMUSG00000039191.13|recombination signal binding protein for immunoglobulin kappa J region
mm39_v1_chr18_+_35987791_35987803	0.109714	Thra	ENSMUST00000235404.2|Cxxc5|ENSMUSG00000046668.10|CXXC finger 5
mm39_v1_chr10_+_84412490_84412490	0.108403	Thra	ENSMUST00000020223.8|Tcp11l2|ENSMUSG00000020034.8|t-complex 11 (mouse) like 2
mm39_v1_chr1_+_131838220_131838277	0.107245	Thra	ENSMUST00000189946.7|Nucks1|ENSMUSG00000026434.13|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm39_v1_chr7_+_126575510_126575572	0.103805	Thra	ENSMUST00000206780.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chr11_+_97697328_97697446	0.0998017	Thra	ENSMUST00000153520.3|Lasp1|ENSMUSG00000038366.16|LIM and SH3 protein 1
mm39_v1_chr4_-_109333866_109333924	0.097351	Thra	ENSMUST00000030284.10|Rnf11|ENSMUSG00000028557.11|ring finger protein 11
mm39_v1_chr16_-_19060440_19060460	0.0955401	Thra	ENSMUST00000103751.3|Iglv3|ENSMUSG00000076939.3|immunoglobulin lambda variable 3
mm39_v1_chr10_+_93476903_93476918	0.0932306	Thra	ENSMUST00000020204.5|Ntn4|ENSMUSG00000020019.5|netrin 4
mm39_v1_chr2_-_79959178_79959339	0.0923907	Thra	ENSMUST00000102654.11|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent	ENSMUST00000102655.10|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent
mm39_v1_chr17_+_80614795_80614854	0.089244	Thra	ENSMUST00000223878.2|Arhgef33|ENSMUSG00000054901.8|Rho guanine nucleotide exchange factor (GEF) 33	ENSMUST00000068175.6|Arhgef33|ENSMUSG00000054901.8|Rho guanine nucleotide exchange factor (GEF) 33	ENSMUST00000224391.2|Arhgef33|ENSMUSG00000054901.8|Rho guanine nucleotide exchange factor (GEF) 33
mm39_v1_chr2_-_34716083_34716099	0.0887225	Thra	ENSMUST00000113077.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000028220.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr19_-_5711650_5711695	0.0883998	Thra	ENSMUST00000236006.2|Sipa1|ENSMUSG00000056917.14|signal-induced proliferation associated gene 1
mm39_v1_chr10_-_17823736_17823846	0.087944	Thra	ENSMUST00000037879.8|Heca|ENSMUSG00000039879.10|hdc homolog, cell cycle regulator
mm39_v1_chr12_-_111679344_111679366	0.0867772	Thra	ENSMUST00000160576.2|Bag5|ENSMUSG00000049792.7|BCL2-associated athanogene 5
mm39_v1_chr3_+_38941089_38941089	0.0867571	Thra	ENSMUST00000061260.8|Fat4|ENSMUSG00000046743.7|FAT atypical cadherin 4
mm39_v1_chr11_+_40624466_40624588	0.0842316	Thra	ENSMUST00000020578.11|Nudcd2|ENSMUSG00000020328.11|NudC domain containing 2
mm39_v1_chr16_-_65359566_65359655	0.0841021	Thra	ENSMUST00000004965.8|Chmp2b|ENSMUSG00000004843.8|charged multivesicular body protein 2B
mm39_v1_chr19_+_8595369_8595421	0.0838601	Thra	ENSMUST00000010250.4|Slc22a6|ENSMUSG00000024650.6|solute carrier family 22 (organic anion transporter), member 6
mm39_v1_chr10_+_79984097_79984115	0.0822734	Thra	ENSMUST00000099492.10|Midn|ENSMUSG00000035621.14|midnolin	ENSMUST00000042057.12|Midn|ENSMUSG00000035621.14|midnolin
mm39_v1_chr2_+_29855572_29855700	0.0803924	Thra	ENSMUST00000113719.9|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000113717.8|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000113741.8|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000100225.9|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000095083.11|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1	ENSMUST00000046257.14|Sptan1|ENSMUSG00000057738.15|spectrin alpha, non-erythrocytic 1
mm39_v1_chr16_-_65359406_65359533	0.0747649	Thra	ENSMUST00000231259.2|Chmp2b|ENSMUSG00000004843.8|charged multivesicular body protein 2B
mm39_v1_chr19_-_56378459_56378475	0.0742784	Thra	ENSMUST00000040711.15|Nrap|ENSMUSG00000049134.16|nebulin-related anchoring protein	ENSMUST00000095947.11|Nrap|ENSMUSG00000049134.16|nebulin-related anchoring protein	ENSMUST00000073536.13|Nrap|ENSMUSG00000049134.16|nebulin-related anchoring protein
mm39_v1_chr6_-_71800788_71800799	0.0714354	Thra	ENSMUST00000065103.4|Mrpl35|ENSMUSG00000052962.4|mitochondrial ribosomal protein L35
mm39_v1_chr9_+_108685555_108685640	0.0700695	Thra	ENSMUST00000035218.9|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000195323.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000194819.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain
mm39_v1_chr2_+_145627900_145628073	0.062305	Thra	ENSMUST00000110005.8|Rin2|ENSMUSG00000001768.17|Ras and Rab interactor 2	ENSMUST00000094480.11|Rin2|ENSMUSG00000001768.17|Ras and Rab interactor 2
mm39_v1_chr19_-_37153436_37153478	0.0597581	Thra	ENSMUST00000142973.2|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000154376.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3
mm39_v1_chr11_+_83743746_83743786	0.0593404	Thra	ENSMUST00000108113.3|Hnf1b|ENSMUSG00000020679.12|HNF1 homeobox B
mm39_v1_chr16_+_20513658_20513759	0.0513841	Thra	ENSMUST00000056518.13|Fam131a|ENSMUSG00000050821.15|family with sequence similarity 131, member A
mm39_v1_chr4_+_110254907_110255005	0.0505443	Thra	ENSMUST00000097920.9|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000080744.13|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4
mm39_v1_chr7_-_125799585_125799640	0.0489368	Thra	ENSMUST00000163959.2|Xpo6|ENSMUSG00000000131.16|exportin 6
mm39_v1_chr19_-_4665668_4665729	0.0473582	Thra	ENSMUST00000113822.3|Lrfn4|ENSMUSG00000045045.8|leucine rich repeat and fibronectin type III domain containing 4
mm39_v1_chr9_+_64142483_64142483	0.0460768	Thra	ENSMUST00000039011.4|Uchl4|ENSMUSG00000035337.4|ubiquitin carboxyl-terminal esterase L4
mm39_v1_chr6_+_11907808_11907910	0.0453606	Thra	ENSMUST00000155037.4|Phf14|ENSMUSG00000029629.18|PHD finger protein 14
mm39_v1_chr8_-_49296915_49296986	0.0445715	Thra	ENSMUST00000211812.2|Tenm3|ENSMUSG00000031561.17|teneurin transmembrane protein 3
mm39_v1_chr2_+_32340459_32340474	0.0424498	Thra	ENSMUST00000048431.3|Naif1|ENSMUSG00000039164.3|nuclear apoptosis inducing factor 1
mm39_v1_chr15_-_102419115_102419140	0.0418971	Thra	ENSMUST00000171565.8|Map3k12|ENSMUSG00000023050.10|mitogen-activated protein kinase kinase kinase 12
mm39_v1_chr19_-_4665509_4665540	0.0399855	Thra	ENSMUST00000053597.3|Lrfn4|ENSMUSG00000045045.8|leucine rich repeat and fibronectin type III domain containing 4
mm39_v1_chr7_-_140793990_140793993	0.0395045	Thra	ENSMUST00000026573.7|Lmntd2|ENSMUSG00000025500.13|lamin tail domain containing 2	ENSMUST00000170841.9|Lmntd2|ENSMUSG00000025500.13|lamin tail domain containing 2
mm39_v1_chr7_+_18946448_18946470	0.0351173	Thra	ENSMUST00000060225.6|Gpr4|ENSMUSG00000044317.8|G protein-coupled receptor 4
mm39_v1_chr2_+_26279345_26279377	0.0301035	Thra	ENSMUST00000076431.13|Pmpca|ENSMUSG00000026926.15|peptidase (mitochondrial processing) alpha	ENSMUST00000114093.2|Pmpca|ENSMUSG00000026926.15|peptidase (mitochondrial processing) alpha
mm39_v1_chr16_+_24540599_24540634	0.0271595	Thra	ENSMUST00000115314.4|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chrX_-_134111421_134111449	0.0268748	Thra	ENSMUST00000033783.2|Tceal6|ENSMUSG00000031409.2|transcription elongation factor A (SII)-like 6
mm39_v1_chr7_-_119461027_119461086	0.0231958	Thra	ENSMUST00000137888.2|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	ENSMUST00000142120.2|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm39_v1_chr11_+_67477347_67477366	0.0213967	Thra	ENSMUST00000108682.9|Gas7|ENSMUSG00000033066.17|growth arrest specific 7
mm39_v1_chr1_+_163822438_163822472	0.0212561	Thra	ENSMUST00000045694.14|Mettl18|ENSMUSG00000041396.14|methyltransferase like 18	ENSMUST00000111490.2|Mettl18|ENSMUSG00000041396.14|methyltransferase like 18
mm39_v1_chr7_+_139673300_139673315	0.0210258	Thra	ENSMUST00000026540.9|Prap1|ENSMUSG00000025467.9|proline-rich acidic protein 1
mm39_v1_chrX_-_165368675_165368734	0.0154736	Thra	ENSMUST00000000412.3|Egfl6|ENSMUSG00000000402.3|EGF-like-domain, multiple 6
mm39_v1_chr7_+_106413336_106413367	0.0109608	Thra	ENSMUST00000166880.3|Olfr701|ENSMUSG00000036744.14|olfactory receptor 701	ENSMUST00000075414.8|Olfr701|ENSMUSG00000036744.14|olfactory receptor 701
mm39_v1_chr17_+_75024727_75024907	0.00857168	Thra	ENSMUST00000024882.8|Ttc27|ENSMUSG00000024078.8|tetratricopeptide repeat domain 27	ENSMUST00000234751.2|Ttc27|ENSMUSG00000024078.8|tetratricopeptide repeat domain 27	ENSMUST00000234568.2|Ttc27|ENSMUSG00000024078.8|tetratricopeptide repeat domain 27
mm39_v1_chr11_+_67477501_67477546	0.0073778	Thra	ENSMUST00000108680.2|Gas7|ENSMUSG00000033066.17|growth arrest specific 7
mm39_v1_chr14_-_4506874_4506894	0.00675748	Thra	ENSMUST00000224934.2|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta
mm39_v1_chr4_+_110254858_110254905	0.0040742	Thra	ENSMUST00000106589.9|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000106587.9|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000106591.8|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4	ENSMUST00000106592.8|Agbl4|ENSMUSG00000061298.15|ATP/GTP binding protein-like 4
