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GSE58827: Dynamics of the Mouse Liver

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Results for Irf4

Z-value: 0.75

Motif logo

Transcription factors associated with Irf4

Gene Symbol Gene ID Gene Info
ENSMUSG00000021356.11 interferon regulatory factor 4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Irf4mm39_v1_chr13_+_30933209_309332900.105.7e-01Click!

Activity profile of Irf4 motif

Sorted Z-values of Irf4 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr11_+_115353290 3.40 ENSMUST00000106532.4
ENSMUST00000092445.12
ENSMUST00000153466.2
solute carrier family 16 (monocarboxylic acid transporters), member 5
chr9_-_65330231 2.43 ENSMUST00000065894.7
solute carrier family 51, beta subunit
chr2_-_173060647 2.36 ENSMUST00000109116.3
ENSMUST00000029018.14
Z-DNA binding protein 1
chr19_-_58443012 2.25 ENSMUST00000129100.8
ENSMUST00000123957.2
glial cell line derived neurotrophic factor family receptor alpha 1
chr17_-_35081456 1.95 ENSMUST00000025229.11
ENSMUST00000176203.9
ENSMUST00000128767.8
complement factor B
chr9_+_44953723 1.87 ENSMUST00000034600.5
myelin protein zero-like 2
chr14_+_14475188 1.84 ENSMUST00000026315.8
deoxyribonuclease 1-like 3
chr6_+_82018604 1.83 ENSMUST00000042974.15
eva-1 homolog A (C. elegans)
chr1_-_97904958 1.66 ENSMUST00000161567.8
peptidylglycine alpha-amidating monooxygenase
chr5_-_104169696 1.60 ENSMUST00000119025.2
hydroxysteroid (17-beta) dehydrogenase 11
chr4_-_19922599 1.59 ENSMUST00000029900.6
ATPase, H+ transporting, lysosomal V0 subunit D2
chr19_-_58442866 1.58 ENSMUST00000169850.8
glial cell line derived neurotrophic factor family receptor alpha 1
chr5_-_104169785 1.55 ENSMUST00000031251.16
hydroxysteroid (17-beta) dehydrogenase 11
chr17_+_35481702 1.46 ENSMUST00000172785.8
histocompatibility 2, D region locus 1
chr4_-_46536088 1.44 ENSMUST00000102924.3
ENSMUST00000046897.13
tripartite motif-containing 14
chr1_-_164763091 1.37 ENSMUST00000027860.8
chemokine (C motif) ligand 1
chr11_+_48977852 1.36 ENSMUST00000046704.7
ENSMUST00000203810.3
ENSMUST00000203149.3
interferon gamma inducible protein 47
olfactory receptor 56
chr19_-_58443830 1.34 ENSMUST00000026076.14
glial cell line derived neurotrophic factor family receptor alpha 1
chr17_-_35081129 1.30 ENSMUST00000154526.8
complement factor B
chr19_-_58443593 1.28 ENSMUST00000135730.2
ENSMUST00000152507.8
glial cell line derived neurotrophic factor family receptor alpha 1
chr11_+_46701619 1.28 ENSMUST00000068877.7
T cell immunoglobulin and mucin domain containing 4
chr7_-_65020655 1.24 ENSMUST00000032729.8
tight junction protein 1
chr9_+_14187597 1.23 ENSMUST00000208222.2
sestrin 3
chr11_+_48977888 1.18 ENSMUST00000214804.2
interferon gamma inducible protein 47
chr3_+_95434093 1.18 ENSMUST00000015667.9
ENSMUST00000116304.3
cathepsin S
chr3_-_148696155 1.15 ENSMUST00000196526.5
ENSMUST00000200543.5
ENSMUST00000200154.5
adhesion G protein-coupled receptor L2
chr11_+_78234300 1.04 ENSMUST00000002127.14
ENSMUST00000108295.8
unc-119 lipid binding chaperone
chr9_-_116004386 1.04 ENSMUST00000035014.8
transforming growth factor, beta receptor II
chr1_+_52158599 1.02 ENSMUST00000186574.7
ENSMUST00000070968.14
ENSMUST00000191435.7
ENSMUST00000186857.7
ENSMUST00000188681.7
signal transducer and activator of transcription 1
chr1_-_174749379 0.99 ENSMUST00000055294.4
gremlin 2, DAN family BMP antagonist
chr11_-_101062111 0.96 ENSMUST00000164474.8
ENSMUST00000043397.14
pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
chr11_+_43365103 0.96 ENSMUST00000173002.8
ENSMUST00000057679.10
C1q and tumor necrosis factor related protein 2
chr1_+_52158693 0.94 ENSMUST00000189347.7
signal transducer and activator of transcription 1
chr16_-_35759461 0.91 ENSMUST00000081933.14
ENSMUST00000114885.3
deltex 3-like, E3 ubiquitin ligase
chr14_+_34097474 0.90 ENSMUST00000227130.2
multimerin 2
chr2_+_71283620 0.89 ENSMUST00000037210.9
methionyl aminopeptidase type 1D (mitochondrial)
chr5_-_92496730 0.85 ENSMUST00000038816.13
ENSMUST00000118006.3
chemokine (C-X-C motif) ligand 10
chr6_-_49191891 0.83 ENSMUST00000031838.9
insulin-like growth factor 2 mRNA binding protein 3
chr8_-_85500010 0.83 ENSMUST00000109764.8
nuclear factor I/X
chr1_+_52158721 0.82 ENSMUST00000186057.7
signal transducer and activator of transcription 1
chr6_-_87312743 0.78 ENSMUST00000042025.12
ENSMUST00000205033.2
anthrax toxin receptor 1
chr7_-_18757461 0.78 ENSMUST00000036018.6
forkhead box A3
chrX_+_138464065 0.77 ENSMUST00000113027.8
ring finger protein 128
chr1_+_175459559 0.75 ENSMUST00000040250.15
kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr10_+_21758083 0.74 ENSMUST00000120509.8
serum/glucocorticoid regulated kinase 1
chr17_+_35780977 0.74 ENSMUST00000174525.8
ENSMUST00000068291.7
histocompatibility 2, Q region locus 10
chr1_+_175459735 0.71 ENSMUST00000097458.4
kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
chr10_+_69048464 0.71 ENSMUST00000020101.12
Rho-related BTB domain containing 1
chr1_+_16758629 0.71 ENSMUST00000026881.11
lymphocyte antigen 96
chr8_-_85500998 0.70 ENSMUST00000109762.8
nuclear factor I/X
chr4_-_136613498 0.69 ENSMUST00000046384.9
complement component 1, q subcomponent, beta polypeptide
chr3_+_90444613 0.66 ENSMUST00000107335.2
S100 calcium binding protein A16
chr2_-_127630769 0.65 ENSMUST00000028857.14
ENSMUST00000110357.2
nephronophthisis 1 (juvenile) homolog (human)
chr6_-_39095144 0.64 ENSMUST00000038398.7
poly (ADP-ribose) polymerase family, member 12
chr14_-_61283911 0.64 ENSMUST00000111234.10
ENSMUST00000224371.2
tumor necrosis factor receptor superfamily, member 19
chr2_+_22958956 0.59 ENSMUST00000226571.2
ENSMUST00000114529.10
ENSMUST00000114526.9
ENSMUST00000228050.2
acyl-Coenzyme A binding domain containing 5
chr11_-_77784922 0.59 ENSMUST00000017597.5
pipecolic acid oxidase
chr11_+_87457479 0.59 ENSMUST00000239011.2
septin 4
chr7_+_126895463 0.59 ENSMUST00000106306.9
ENSMUST00000120857.8
integrin alpha L
chr16_+_35759346 0.58 ENSMUST00000023622.13
poly (ADP-ribose) polymerase family, member 9
chr10_+_128542120 0.58 ENSMUST00000054125.9
premelanosome protein
chrX_-_43879055 0.57 ENSMUST00000060481.9
DDB1 and CUL4 associated factor 12-like 1
chr5_-_92653377 0.57 ENSMUST00000031377.9
scavenger receptor class B, member 2
chr3_+_90444537 0.57 ENSMUST00000098911.10
S100 calcium binding protein A16
chr1_+_182236728 0.57 ENSMUST00000117245.2
transformation related protein 53 binding protein 2
chr3_+_142202642 0.56 ENSMUST00000090127.7
guanylate binding protein 5
chr11_-_107361525 0.56 ENSMUST00000103064.10
phosphatidylinositol transfer protein, cytoplasmic 1
chrX_-_43879022 0.54 ENSMUST00000115056.2
DDB1 and CUL4 associated factor 12-like 1
chr3_-_142101418 0.54 ENSMUST00000029941.16
ENSMUST00000058626.9
PDZ and LIM domain 5
chr19_+_56385531 0.52 ENSMUST00000026062.10
caspase 7
chr10_+_69048506 0.51 ENSMUST00000167384.8
Rho-related BTB domain containing 1
chr13_-_19579898 0.51 ENSMUST00000197565.3
ENSMUST00000221380.2
ENSMUST00000200323.3
ENSMUST00000199924.2
ENSMUST00000222869.2
STARD3 N-terminal like
chr2_+_127967951 0.50 ENSMUST00000089634.12
ENSMUST00000019281.14
ENSMUST00000110341.9
ENSMUST00000103211.8
ENSMUST00000103210.2
BCL2-like 11 (apoptosis facilitator)
chr8_-_106665060 0.48 ENSMUST00000034369.10
proteasome (prosome, macropain) subunit, beta type 10
chr7_+_126895423 0.47 ENSMUST00000117762.8
integrin alpha L
chrM_+_9459 0.46 ENSMUST00000082411.1
mitochondrially encoded NADH dehydrogenase 3
chr11_-_3489228 0.46 ENSMUST00000075118.10
ENSMUST00000136243.2
ENSMUST00000020721.15
ENSMUST00000170588.8
smoothelin
chr1_-_155912216 0.45 ENSMUST00000027738.14
torsin A interacting protein 1
chr17_+_23898223 0.45 ENSMUST00000024699.4
ENSMUST00000232719.2
claudin 6
chr13_-_100753419 0.45 ENSMUST00000168772.2
ENSMUST00000163163.9
ENSMUST00000022137.14
MARVEL (membrane-associating) domain containing 2
chr14_-_73622638 0.44 ENSMUST00000228637.2
ENSMUST00000022704.9
integral membrane protein 2B
chr5_+_102629240 0.44 ENSMUST00000073302.12
ENSMUST00000094559.9
Rho GTPase activating protein 24
chr19_+_34560922 0.42 ENSMUST00000102825.4
interferon-induced protein with tetratricopeptide repeats 3
chr1_-_155912159 0.42 ENSMUST00000097527.10
torsin A interacting protein 1
chr13_-_19579961 0.41 ENSMUST00000039694.13
STARD3 N-terminal like
chr8_+_105897300 0.41 ENSMUST00000052209.9
ENSMUST00000109392.9
ENSMUST00000109395.8
core binding factor beta
chr7_+_126895531 0.41 ENSMUST00000170971.8
integrin alpha L
chr7_-_89176294 0.39 ENSMUST00000207932.2
protease, serine 23
chr19_+_41017714 0.38 ENSMUST00000051806.12
ENSMUST00000112200.3
deoxynucleotidyltransferase, terminal
chr19_+_46611826 0.37 ENSMUST00000111855.5
WW domain binding protein 1 like
chr9_+_108394761 0.37 ENSMUST00000192819.2
glutamine-rich 1
chr2_+_22959223 0.37 ENSMUST00000114523.10
acyl-Coenzyme A binding domain containing 5
chr13_+_38009981 0.36 ENSMUST00000110238.10
ras responsive element binding protein 1
chr5_-_99391073 0.36 ENSMUST00000166484.2
RasGEF domain family, member 1B
chr13_-_100753181 0.35 ENSMUST00000225754.2
MARVEL (membrane-associating) domain containing 2
chr1_+_61677977 0.35 ENSMUST00000075374.10
par-3 family cell polarity regulator beta
chr3_-_57202301 0.34 ENSMUST00000171384.8
transmembrane 4 superfamily member 1
chr7_-_4448631 0.34 ENSMUST00000008579.14
retinol dehydrogenase 13 (all-trans and 9-cis)
chrX_+_20714782 0.33 ENSMUST00000001155.11
ENSMUST00000122312.8
ENSMUST00000120356.8
ENSMUST00000122850.2
Araf proto-oncogene, serine/threonine kinase
chr13_-_23894697 0.33 ENSMUST00000091707.13
ENSMUST00000006787.8
homeostatic iron regulator
chr19_-_57185988 0.31 ENSMUST00000099294.9
actin-binding LIM protein 1
chr13_-_23894828 0.31 ENSMUST00000091706.14
homeostatic iron regulator
chr1_-_156766957 0.30 ENSMUST00000171292.8
ENSMUST00000063199.13
ENSMUST00000027886.14
Ral GEF with PH domain and SH3 binding motif 2
chr1_+_44158111 0.29 ENSMUST00000155917.8
basic, immunoglobulin-like variable motif containing
chrM_+_8603 0.29 ENSMUST00000082409.1
mitochondrially encoded cytochrome c oxidase III
chr17_+_34783242 0.28 ENSMUST00000015612.14
notch 4
chr19_-_24202344 0.27 ENSMUST00000099558.5
ENSMUST00000232956.2
tight junction protein 2
chr11_-_43727071 0.26 ENSMUST00000167574.2
adrenergic receptor, alpha 1b
chr17_+_80597632 0.25 ENSMUST00000227729.2
ENSMUST00000061703.10
MORN repeat containing 2
chr13_-_113182891 0.25 ENSMUST00000231962.2
ENSMUST00000022282.6
glutathione peroxidase 8 (putative)
chr7_-_5128936 0.25 ENSMUST00000147835.4
RAS-like, family 2, locus 9
chr8_+_46338498 0.24 ENSMUST00000034053.7
PDZ and LIM domain 3
chr3_-_102871440 0.23 ENSMUST00000058899.13
nuclear receptor subfamily 1, group H, member 5
chr18_+_7869705 0.22 ENSMUST00000166062.8
ENSMUST00000169010.8
WW domain containing adaptor with coiled-coil
chrX_-_9335525 0.22 ENSMUST00000015484.10
cytochrome b-245, beta polypeptide
chr14_+_55815580 0.21 ENSMUST00000174484.8
proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr19_-_57185928 0.21 ENSMUST00000111544.8
actin-binding LIM protein 1
chr1_-_184464810 0.21 ENSMUST00000048572.7
H2.0-like homeobox
chr1_+_16758731 0.21 ENSMUST00000190366.2
lymphocyte antigen 96
chr2_+_22959452 0.21 ENSMUST00000155602.4
acyl-Coenzyme A binding domain containing 5
chr9_-_107419309 0.20 ENSMUST00000195235.6
cytochrome b-561 domain containing 2
chr19_-_3955230 0.20 ENSMUST00000145791.8
T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
chr10_-_53952686 0.18 ENSMUST00000220088.2
mannosidase 1, alpha
chr4_-_129132963 0.17 ENSMUST00000097873.10
expressed sequence C77080
chr14_+_65504067 0.16 ENSMUST00000224629.2
F-box protein 16
chr4_-_107035479 0.16 ENSMUST00000058585.14
transcription elongation factor A (SII) N-terminal and central domain containing 2
chr14_+_55815999 0.14 ENSMUST00000172738.2
ENSMUST00000089619.13
proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr10_-_12424623 0.14 ENSMUST00000219003.2
utrophin
chr10_+_56255184 0.14 ENSMUST00000220069.2
gap junction protein, alpha 1
chr1_+_57884693 0.14 ENSMUST00000169772.3
spermatogenesis associated, serine-rich 2-like
chr18_+_37840092 0.14 ENSMUST00000195823.2
protocadherin gamma subfamily A, 6
chr14_+_55815879 0.14 ENSMUST00000174563.8
proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr10_+_18283405 0.13 ENSMUST00000037341.14
NHS-like 1
chr2_+_38401826 0.13 ENSMUST00000112895.8
NIMA (never in mitosis gene a)-related expressed kinase 6
chr6_-_70313491 0.13 ENSMUST00000103388.4
immunoglobulin kappa variable 6-20
chr19_-_57185808 0.12 ENSMUST00000111546.8
actin-binding LIM protein 1
chr3_+_89328926 0.12 ENSMUST00000094378.10
ENSMUST00000137793.2
src homology 2 domain-containing transforming protein C1
chr6_-_87312681 0.12 ENSMUST00000204805.3
anthrax toxin receptor 1
chr14_+_55815817 0.11 ENSMUST00000174259.8
proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
chr11_+_119283887 0.11 ENSMUST00000093902.12
ENSMUST00000131035.10
ring finger protein 213
chr13_-_30170031 0.11 ENSMUST00000102948.11
E2F transcription factor 3
chr10_+_94411119 0.10 ENSMUST00000121471.8
transmembrane and coiled coil domains 3
chr5_+_102629365 0.10 ENSMUST00000112854.8
Rho GTPase activating protein 24
chr5_+_24598633 0.10 ENSMUST00000138168.3
ENSMUST00000115077.8
ATP-binding cassette, sub-family B (MDR/TAP), member 8
chr8_-_46577183 0.09 ENSMUST00000170416.8
sorting nexin 25
chr13_-_100689212 0.09 ENSMUST00000022140.12
occludin
chr2_+_112114906 0.08 ENSMUST00000053666.8
solute carrier family 12, member 6
chr9_-_35179042 0.08 ENSMUST00000217306.2
ENSMUST00000125087.2
ENSMUST00000121564.8
ENSMUST00000063782.12
ENSMUST00000059057.14
family with sequence similarity 118, member B
chrX_+_93679671 0.07 ENSMUST00000096368.4
G1 to S phase transition 2
chr10_+_82696135 0.07 ENSMUST00000219442.3
thioredoxin reductase 1
chr15_+_102391614 0.06 ENSMUST00000229432.2
poly(rC) binding protein 2
chrX_+_135608725 0.06 ENSMUST00000055104.6
transcription elongation factor A (SII)-like 1
chr1_-_163141278 0.06 ENSMUST00000027878.14
paired related homeobox 1
chr11_+_48977495 0.06 ENSMUST00000152914.2
interferon gamma inducible protein 47
chr19_+_34585322 0.06 ENSMUST00000076249.6
interferon-induced protein with tetratricopeptide repeats 3B
chr12_-_113542610 0.05 ENSMUST00000195468.6
ENSMUST00000103442.3
immunoglobulin heavy variable 5-2
chr1_+_57445487 0.04 ENSMUST00000027114.6
matrix AAA peptidase interacting protein 1
chr12_+_108601963 0.04 ENSMUST00000223109.2
Ena-vasodilator stimulated phosphoprotein
chr16_-_43484494 0.04 ENSMUST00000096065.6
T cell immunoreceptor with Ig and ITIM domains
chr15_-_66432938 0.04 ENSMUST00000048372.7
transmembrane protein 71
chr2_+_38401655 0.04 ENSMUST00000054234.10
ENSMUST00000112902.8
NIMA (never in mitosis gene a)-related expressed kinase 6
chr11_+_87938626 0.04 ENSMUST00000107920.10
serine and arginine-rich splicing factor 1
chr3_+_152052102 0.03 ENSMUST00000117492.9
ENSMUST00000026507.13
ENSMUST00000197748.5
ubiquitin specific peptidase 33
chr8_+_46338557 0.02 ENSMUST00000210422.2
PDZ and LIM domain 3
chr14_-_78970160 0.02 ENSMUST00000226342.3
diacylglycerol kinase, eta
chr7_-_140846328 0.02 ENSMUST00000106023.8
ENSMUST00000097952.9
ENSMUST00000026571.11
interferon regulatory factor 7
chrX_-_100266032 0.00 ENSMUST00000120389.8
ENSMUST00000156473.8
ENSMUST00000077876.4
sorting nexin 12
chr14_+_65504151 0.00 ENSMUST00000169656.3
ENSMUST00000226005.2
F-box protein 16
chr18_+_37637317 0.00 ENSMUST00000052179.8
protocadherin beta 20

Network of associatons between targets according to the STRING database.

First level regulatory network of Irf4

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.8 GO:0034240 negative regulation of macrophage fusion(GO:0034240)
0.8 3.2 GO:0006710 androgen catabolic process(GO:0006710)
0.6 2.4 GO:2000563 positive regulation of CD4-positive, alpha-beta T cell proliferation(GO:2000563)
0.4 1.2 GO:0034769 basement membrane disassembly(GO:0034769)
0.3 1.0 GO:0060300 regulation of cytokine activity(GO:0060300)
0.3 1.5 GO:0002485 antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway(GO:0002484) antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent(GO:0002485)
0.3 1.0 GO:2001287 negative regulation of caveolin-mediated endocytosis(GO:2001287)
0.2 1.5 GO:0019805 quinolinate biosynthetic process(GO:0019805)
0.2 0.7 GO:1903348 positive regulation of bicellular tight junction assembly(GO:1903348)
0.2 0.9 GO:1901740 negative regulation of myoblast fusion(GO:1901740)
0.2 0.6 GO:1900390 regulation of antigen processing and presentation of peptide antigen via MHC class I(GO:0002589) negative regulation of antigen processing and presentation of peptide antigen via MHC class I(GO:0002590) regulation of T cell antigen processing and presentation(GO:0002625) positive regulation of iron ion transport(GO:0034758) positive regulation of iron ion transmembrane transport(GO:0034761) regulation of iron ion import(GO:1900390) regulation of ferrous iron import into cell(GO:1903989) positive regulation of ferrous iron import into cell(GO:1903991) regulation of ferrous iron binding(GO:1904432) positive regulation of ferrous iron binding(GO:1904434) regulation of transferrin receptor binding(GO:1904435) positive regulation of transferrin receptor binding(GO:1904437) regulation of ferrous iron import across plasma membrane(GO:1904438) positive regulation of ferrous iron import across plasma membrane(GO:1904440)
0.2 1.7 GO:0031179 peptide modification(GO:0031179)
0.2 0.6 GO:0006553 lysine metabolic process(GO:0006553)
0.2 0.8 GO:0070368 positive regulation of hepatocyte differentiation(GO:0070368)
0.2 3.3 GO:0006957 complement activation, alternative pathway(GO:0006957)
0.2 2.4 GO:0070863 positive regulation of protein glycosylation(GO:0060050) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.2 1.5 GO:0002291 T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:0002291)
0.1 0.9 GO:1903054 negative regulation of extracellular matrix organization(GO:1903054)
0.1 1.2 GO:0038203 TORC2 signaling(GO:0038203)
0.1 0.9 GO:0032497 detection of lipopolysaccharide(GO:0032497)
0.1 2.4 GO:0060340 positive regulation of type I interferon-mediated signaling pathway(GO:0060340)
0.1 1.2 GO:0030242 pexophagy(GO:0030242)
0.1 0.5 GO:0072734 response to staurosporine(GO:0072733) cellular response to staurosporine(GO:0072734)
0.1 0.5 GO:0052151 positive regulation by symbiont of host apoptotic process(GO:0052151) positive regulation of apoptotic process by virus(GO:0060139)
0.1 1.5 GO:0090557 establishment of endothelial intestinal barrier(GO:0090557)
0.1 0.3 GO:0001982 baroreceptor response to decreased systemic arterial blood pressure(GO:0001982)
0.1 1.8 GO:0006309 apoptotic DNA fragmentation(GO:0006309)
0.1 0.9 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 1.5 GO:0021684 cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.1 0.6 GO:1900227 positive regulation of NLRP3 inflammasome complex assembly(GO:1900227)
0.1 1.8 GO:0007035 vacuolar acidification(GO:0007035)
0.1 0.9 GO:0030948 negative regulation of vascular endothelial growth factor receptor signaling pathway(GO:0030948)
0.1 2.6 GO:0035458 cellular response to interferon-beta(GO:0035458)
0.1 0.4 GO:0042985 negative regulation of amyloid precursor protein biosynthetic process(GO:0042985)
0.1 0.5 GO:0035021 negative regulation of Rac protein signal transduction(GO:0035021)
0.1 0.4 GO:1903691 positive regulation of wound healing, spreading of epidermal cells(GO:1903691)
0.0 1.4 GO:0032897 negative regulation of viral transcription(GO:0032897)
0.0 0.1 GO:0003294 atrial ventricular junction remodeling(GO:0003294) regulation of cell communication by chemical coupling(GO:0010645) positive regulation of cell communication by chemical coupling(GO:0010652)
0.0 0.7 GO:0043402 glucocorticoid mediated signaling pathway(GO:0043402)
0.0 0.2 GO:0071894 histone H2B conserved C-terminal lysine ubiquitination(GO:0071894)
0.0 0.3 GO:0009644 response to high light intensity(GO:0009644)
0.0 0.2 GO:0045629 negative regulation of T-helper 2 cell differentiation(GO:0045629)
0.0 0.6 GO:0060330 regulation of response to interferon-gamma(GO:0060330)
0.0 1.0 GO:0046321 positive regulation of fatty acid oxidation(GO:0046321)
0.0 0.3 GO:1903847 regulation of aorta morphogenesis(GO:1903847) positive regulation of aorta morphogenesis(GO:1903849)
0.0 0.6 GO:0048023 positive regulation of melanin biosynthetic process(GO:0048023) positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.0 0.6 GO:1900119 positive regulation of execution phase of apoptosis(GO:1900119)
0.0 0.6 GO:0006622 protein targeting to lysosome(GO:0006622)
0.0 0.2 GO:0097411 hypoxia-inducible factor-1alpha signaling pathway(GO:0097411)
0.0 0.7 GO:0002474 antigen processing and presentation of peptide antigen via MHC class I(GO:0002474)
0.0 0.9 GO:0010390 histone monoubiquitination(GO:0010390)
0.0 0.1 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.0 0.1 GO:0097475 motor neuron migration(GO:0097475)
0.0 5.8 GO:0050731 positive regulation of peptidyl-tyrosine phosphorylation(GO:0050731)
0.0 0.2 GO:0032485 regulation of Ral protein signal transduction(GO:0032485)
0.0 0.8 GO:0042036 negative regulation of cytokine biosynthetic process(GO:0042036)
0.0 0.1 GO:0071477 hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477)
0.0 0.1 GO:0007527 adult somatic muscle development(GO:0007527)
0.0 0.1 GO:1990839 response to endothelin(GO:1990839)
0.0 0.6 GO:0019884 antigen processing and presentation of exogenous antigen(GO:0019884)
0.0 1.9 GO:0033077 T cell differentiation in thymus(GO:0033077) thymocyte aggregation(GO:0071594)
0.0 0.5 GO:0071385 cellular response to glucocorticoid stimulus(GO:0071385)
0.0 0.1 GO:0030576 Cajal body organization(GO:0030576)
0.0 0.2 GO:0033750 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753)
0.0 0.1 GO:0070345 negative regulation of fat cell proliferation(GO:0070345)
0.0 0.7 GO:0070830 bicellular tight junction assembly(GO:0070830)
0.0 0.1 GO:2000051 negative regulation of non-canonical Wnt signaling pathway(GO:2000051)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.5 GO:0034687 integrin alphaL-beta2 complex(GO:0034687)
0.2 2.2 GO:0042612 MHC class I protein complex(GO:0042612)
0.1 0.9 GO:0046696 lipopolysaccharide receptor complex(GO:0046696)
0.1 0.6 GO:0043202 lysosomal lumen(GO:0043202)
0.1 1.2 GO:0061700 GATOR2 complex(GO:0061700)
0.1 1.6 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 0.6 GO:0008537 proteasome activator complex(GO:0008537)
0.1 0.8 GO:0061689 paranodal junction(GO:0033010) tricellular tight junction(GO:0061689)
0.1 0.5 GO:1990111 spermatoproteasome complex(GO:1990111)
0.1 0.6 GO:1990357 terminal web(GO:1990357)
0.1 1.2 GO:0046581 intercellular canaliculus(GO:0046581)
0.1 0.6 GO:0032585 multivesicular body membrane(GO:0032585)
0.1 0.9 GO:0031258 lamellipodium membrane(GO:0031258)
0.0 0.9 GO:0044232 organelle membrane contact site(GO:0044232)
0.0 0.1 GO:0070435 Shc-EGFR complex(GO:0070435)
0.0 3.2 GO:0005811 lipid particle(GO:0005811)
0.0 6.3 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.1 GO:0018444 translation release factor complex(GO:0018444)
0.0 1.0 GO:0051233 spindle midzone(GO:0051233)
0.0 1.7 GO:0030667 secretory granule membrane(GO:0030667)
0.0 0.7 GO:0097546 ciliary base(GO:0097546)
0.0 0.5 GO:0005868 cytoplasmic dynein complex(GO:0005868)
0.0 1.6 GO:0005581 collagen trimer(GO:0005581)
0.0 0.2 GO:0043020 NADPH oxidase complex(GO:0043020)
0.0 0.2 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 0.4 GO:0005921 gap junction(GO:0005921)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.4 GO:0003692 left-handed Z-DNA binding(GO:0003692)
0.4 1.7 GO:0016842 amidine-lyase activity(GO:0016842)
0.3 1.0 GO:0005026 transforming growth factor beta receptor activity, type II(GO:0005026)
0.3 1.5 GO:0030369 ICAM-3 receptor activity(GO:0030369)
0.2 2.8 GO:0031730 CCR5 chemokine receptor binding(GO:0031730)
0.2 3.2 GO:0004303 estradiol 17-beta-dehydrogenase activity(GO:0004303)
0.2 2.8 GO:0030881 beta-2-microglobulin binding(GO:0030881)
0.2 0.9 GO:0001875 lipopolysaccharide receptor activity(GO:0001875)
0.1 0.9 GO:0048248 CXCR3 chemokine receptor binding(GO:0048248)
0.1 1.5 GO:0016174 NAD(P)H oxidase activity(GO:0016174)
0.1 1.4 GO:0071253 connexin binding(GO:0071253)
0.1 1.0 GO:0036122 BMP binding(GO:0036122)
0.1 0.6 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.1 0.7 GO:0043423 3-phosphoinositide-dependent protein kinase binding(GO:0043423)
0.1 1.6 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.1 0.3 GO:0004937 alpha1-adrenergic receptor activity(GO:0004937)
0.1 0.6 GO:0061133 endopeptidase activator activity(GO:0061133)
0.1 3.4 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.6 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 1.2 GO:0001968 fibronectin binding(GO:0001968)
0.0 6.6 GO:0005178 integrin binding(GO:0005178)
0.0 0.5 GO:0097200 cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200)
0.0 1.1 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 1.1 GO:0008009 chemokine activity(GO:0008009)
0.0 1.0 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.9 GO:0005521 lamin binding(GO:0005521)
0.0 1.8 GO:0004520 endodeoxyribonuclease activity(GO:0004520)
0.0 0.8 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 0.1 GO:0048408 epidermal growth factor binding(GO:0048408)
0.0 1.3 GO:0001786 phosphatidylserine binding(GO:0001786)
0.0 0.5 GO:0098641 cadherin binding involved in cell-cell adhesion(GO:0098641)
0.0 0.1 GO:0035827 rubidium ion transmembrane transporter activity(GO:0035827)
0.0 0.2 GO:0016175 superoxide-generating NADPH oxidase activity(GO:0016175)
0.0 0.5 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.0 0.5 GO:0001618 virus receptor activity(GO:0001618)
0.0 3.6 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.5 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.5 GO:0070840 dynein complex binding(GO:0070840)
0.0 0.2 GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.0 0.9 GO:0015485 cholesterol binding(GO:0015485)
0.0 0.6 GO:0051059 NF-kappaB binding(GO:0051059)
0.0 4.7 GO:0003924 GTPase activity(GO:0003924)
0.0 0.2 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442) proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.8 ST TYPE I INTERFERON PATHWAY Type I Interferon (alpha/beta IFN) Pathway
0.1 3.1 ST G ALPHA S PATHWAY G alpha s Pathway
0.1 6.6 PID RET PATHWAY Signaling events regulated by Ret tyrosine kinase
0.0 1.5 PID INTEGRIN2 PATHWAY Beta2 integrin cell surface interactions
0.0 0.9 PID ANTHRAX PATHWAY Cellular roles of Anthrax toxin
0.0 1.0 PID ALK1 PATHWAY ALK1 signaling events
0.0 1.2 PID NEPHRIN NEPH1 PATHWAY Nephrin/Neph1 signaling in the kidney podocyte
0.0 0.9 PID TOLL ENDOGENOUS PATHWAY Endogenous TLR signaling
0.0 0.9 PID CXCR3 PATHWAY CXCR3-mediated signaling events
0.0 1.2 PID FOXO PATHWAY FoxO family signaling
0.0 0.4 PID DNA PK PATHWAY DNA-PK pathway in nonhomologous end joining
0.0 0.5 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.0 0.3 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.2 REACTOME ENDOSOMAL VACUOLAR PATHWAY Genes involved in Endosomal/Vacuolar pathway
0.2 3.9 REACTOME INITIAL TRIGGERING OF COMPLEMENT Genes involved in Initial triggering of complement
0.2 0.9 REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1 Genes involved in IKK complex recruitment mediated by RIP1
0.2 2.8 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.1 6.5 REACTOME NCAM1 INTERACTIONS Genes involved in NCAM1 interactions
0.1 2.4 REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI Genes involved in RIP-mediated NFkB activation via DAI
0.1 0.9 REACTOME TRYPTOPHAN CATABOLISM Genes involved in Tryptophan catabolism
0.1 1.4 REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS Genes involved in Apoptotic cleavage of cell adhesion proteins
0.1 1.8 REACTOME INSULIN RECEPTOR RECYCLING Genes involved in Insulin receptor recycling
0.0 2.2 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 1.0 REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
0.0 1.0 REACTOME SIGNALING BY BMP Genes involved in Signaling by BMP
0.0 1.5 REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
0.0 0.3 REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
0.0 0.6 REACTOME DCC MEDIATED ATTRACTIVE SIGNALING Genes involved in DCC mediated attractive signaling
0.0 1.1 REACTOME AUTODEGRADATION OF THE E3 UBIQUITIN LIGASE COP1 Genes involved in Autodegradation of the E3 ubiquitin ligase COP1
0.0 0.5 REACTOME ACTIVATION OF BH3 ONLY PROTEINS Genes involved in Activation of BH3-only proteins
0.0 0.4 REACTOME AMYLOIDS Genes involved in Amyloids
0.0 0.5 REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS Genes involved in Caspase-mediated cleavage of cytoskeletal proteins
0.0 0.2 REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis