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PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish

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Results for batf2+batf3

Z-value: 0.83

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Transcription factors associated with batf2+batf3

Gene Symbol Gene ID Gene Info
batf3
ENSDARG00000042577 basic leucine zipper transcription factor, ATF-like 3
batf2
ENSDARG00000105562 si_dkey-23i12.7

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
si:dkey-23i12.7dr11_v1_chr7_+_25053331_250533310.232.4e-02Click!
batf3dr11_v1_chr20_-_37813863_378138630.132.1e-01Click!

Activity profile of batf2+batf3 motif

Sorted Z-values of batf2+batf3 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr20_+_20637866 10.51 ENSDART00000060203
ENSDART00000079079
rtn1b
reticulon 1b
chr16_-_12173554 10.02 ENSDART00000110567
ENSDART00000155935
clstn3
calsyntenin 3
chr20_+_20638034 9.56 ENSDART00000189759
rtn1b
reticulon 1b
chr7_+_40228422 9.44 ENSDART00000052222
ptprn2
protein tyrosine phosphatase, receptor type, N polypeptide 2
chr22_+_1796057 8.45 ENSDART00000170834
znf1179
zinc finger protein 1179
chr14_+_11950011 6.52 ENSDART00000188138
frmpd3
FERM and PDZ domain containing 3
chr11_-_29623380 6.34 ENSDART00000162587
ENSDART00000193935
ENSDART00000191646
chd5
chromodomain helicase DNA binding protein 5
chr13_+_36146415 6.24 ENSDART00000140301
TTC9
si:ch211-259k16.3
chr21_-_23308286 6.11 ENSDART00000184419
zbtb16a
zinc finger and BTB domain containing 16a
chr1_+_10305611 5.76 ENSDART00000043881
zgc:77880
zgc:77880
chr15_-_762319 5.41 ENSDART00000154306
ENSDART00000157492
si:dkey-7i4.16
znf1011
si:dkey-7i4.16
zinc finger protein 1011
chr17_+_29345606 5.10 ENSDART00000086164
kctd3
potassium channel tetramerization domain containing 3
chr22_+_1904546 4.41 ENSDART00000164865
si:dkey-15h8.10
si:dkey-15h8.10
chr22_+_2801464 4.15 ENSDART00000132419
si:dkey-20i20.7
si:dkey-20i20.7
chr22_+_2715815 4.10 ENSDART00000042770
znf1163
zinc finger protein 1163
chr22_+_2120815 4.07 ENSDART00000169133
ENSDART00000166644
ENSDART00000162221
ENSDART00000157840
znf1155
zinc finger protein 1155
chr22_+_2819613 3.86 ENSDART00000131234
si:dkey-20i20.3
si:dkey-20i20.3
chr22_+_1922293 3.84 ENSDART00000165758
znf1181
zinc finger protein 1181
chr22_+_1940595 3.84 ENSDART00000163506
znf1167
zinc finger protein 1167
chr24_+_744713 3.82 ENSDART00000067764
stk17a
serine/threonine kinase 17a
chr22_+_1700552 3.72 ENSDART00000166185
znf1154
zinc finger protein 1154
chr22_+_2183110 3.70 ENSDART00000159279
ENSDART00000121703
znf1152
zinc finger protein 1152
chr22_+_2345752 3.60 ENSDART00000143687
zgc:174224
zgc:174224
chr22_+_2844865 3.53 ENSDART00000139123
si:dkey-20i20.4
si:dkey-20i20.4
chr22_+_2254972 3.46 ENSDART00000144906
znf1157
zinc finger protein 1157
chr11_-_44163164 3.42 ENSDART00000047126
clcn4
chloride channel, voltage-sensitive 4
chr13_-_40754499 3.35 ENSDART00000111641
ENSDART00000159255
morn4
MORN repeat containing 4
chr16_+_27614989 3.35 ENSDART00000005625
glipr2l
GLI pathogenesis-related 2, like
chr14_+_33264303 3.23 ENSDART00000130680
ENSDART00000075187
pdzd11
PDZ domain containing 11
chr22_+_2778600 3.21 ENSDART00000134028
si:dkey-20i20.9
si:dkey-20i20.9
chr18_-_46063773 3.21 ENSDART00000078561
si:ch73-262h23.4
si:ch73-262h23.4
chr5_+_11812089 3.18 ENSDART00000111359
fbxo21
F-box protein 21
chr22_+_2524615 3.13 ENSDART00000134277
znf1003
zinc finger protein 1003
chr22_+_1930589 3.05 ENSDART00000159807
znf1153
zinc finger protein 1153
chr22_+_1853999 2.87 ENSDART00000163288
znf1174
zinc finger protein 1174
chr22_+_2111120 2.75 ENSDART00000165525
znf1144
zinc finger protein 1144
chr1_+_41666611 2.72 ENSDART00000145789
fbxo41
F-box protein 41
chr22_+_1641547 2.71 ENSDART00000159804
si:dkey-1b17.2
si:dkey-1b17.2
chr17_+_32500387 2.68 ENSDART00000018423
ywhaqb
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b
chr22_+_2648931 2.67 ENSDART00000106357
zgc:110821
zgc:110821
chr22_+_1947494 2.60 ENSDART00000159121
si:dkey-15h8.15
si:dkey-15h8.15
chr22_+_2298419 2.58 ENSDART00000143499
znf1180
zinc finger protein 1180
chr22_+_2207502 2.52 ENSDART00000169162
si:dkeyp-79b7.12
si:dkeyp-79b7.12
chr22_+_1911269 2.51 ENSDART00000164158
ENSDART00000168205
znf1156
zinc finger protein 1156
chr22_+_30330574 2.50 ENSDART00000104751
mxi1
max interactor 1, dimerization protein
chr8_+_53120278 2.46 ENSDART00000125232
nr2c2
nuclear receptor subfamily 2, group C, member 2
chr22_+_1517318 2.36 ENSDART00000160406
si:ch211-255f4.5
si:ch211-255f4.5
chr22_+_1953096 2.34 ENSDART00000166630
ENSDART00000186234
si:dkey-15h8.16
si:dkey-15h8.16
chr22_+_2239254 2.32 ENSDART00000131396
ENSDART00000135320
znf1144
zinc finger protein 1144
chr15_-_20412286 2.30 ENSDART00000008589
chp2
calcineurin-like EF-hand protein 2
chr17_+_15674052 2.30 ENSDART00000156726
bach2a
BTB and CNC homology 1, basic leucine zipper transcription factor 2a
chr22_+_2247645 2.09 ENSDART00000143366
ENSDART00000147852
si:dkey-4c15.8
si:dkey-4c15.8
chr25_+_7321675 2.03 ENSDART00000104712
ENSDART00000142934
hmg20a
high mobility group 20A
chr22_+_2228919 1.92 ENSDART00000133475
znf1161
zinc finger protein 1161
chr22_+_1462177 1.85 ENSDART00000164685
si:dkeyp-53d3.5
si:dkeyp-53d3.5
chr22_+_2189356 1.83 ENSDART00000157502
ENSDART00000164188
znf1165
zinc finger protein 1165
chr14_-_32959851 1.76 ENSDART00000075157
chic1
cysteine-rich hydrophobic domain 1
chr22_+_2390544 1.70 ENSDART00000147345
ENSDART00000133611
zgc:171435
zgc:171435
chr4_+_30775376 1.62 ENSDART00000158528
si:dkey-11d20.1
si:dkey-11d20.1
chr21_-_14762944 1.62 ENSDART00000114096
arrdc1b
arrestin domain containing 1b
chr20_-_21994901 1.60 ENSDART00000004984
daam1b
dishevelled associated activator of morphogenesis 1b
chr16_+_5184402 1.53 ENSDART00000156685
soga3a
SOGA family member 3a
chr22_+_2315996 1.49 ENSDART00000132489
znf1175
zinc finger protein 1175
chr2_+_27341559 1.40 ENSDART00000176838
tesk2
testis-specific kinase 2
chr16_-_54942532 1.33 ENSDART00000078887
ENSDART00000101402
tmem222a
transmembrane protein 222a
chr7_+_29301497 1.33 ENSDART00000099327
rab8b
RAB8B, member RAS oncogene family
chr22_+_1821718 1.26 ENSDART00000132220
znf1002
zinc finger protein 1002
chr22_+_2751887 1.23 ENSDART00000133652
si:dkey-20i20.11
si:dkey-20i20.11
chr11_+_28166165 1.16 ENSDART00000169360
ENSDART00000192311
ephb2b
eph receptor B2b
chr22_+_2403068 1.03 ENSDART00000132925
ENSDART00000132569
zgc:112977
zgc:112977
chr22_+_1668471 0.83 ENSDART00000163358
si:dkey-1b17.5
si:dkey-1b17.5
chr5_+_37035978 0.77 ENSDART00000167418
nfkbib
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
chr8_-_21110233 0.54 ENSDART00000127371
ENSDART00000100276
tmco1
transmembrane and coiled-coil domains 1
chr4_+_70556298 0.38 ENSDART00000170985
si:dkey-11d20.1
si:dkey-11d20.1
chr7_-_69352424 0.33 ENSDART00000170714
ap1g1
adaptor-related protein complex 1, gamma 1 subunit
chr1_-_20068155 0.26 ENSDART00000102993
mettl14
methyltransferase like 14
chr21_-_23307653 0.24 ENSDART00000140284
ENSDART00000134103
zbtb16a
zinc finger and BTB domain containing 16a
chr24_+_25822999 0.18 ENSDART00000109809
sh3kbp1
SH3-domain kinase binding protein 1
chr3_-_16413606 0.16 ENSDART00000127309
ENSDART00000017172
ENSDART00000136465
eftud2
elongation factor Tu GTP binding domain containing 2
chr16_-_41667101 0.15 ENSDART00000084528
atp2c1
ATPase secretory pathway Ca2+ transporting 1
chr5_+_20823409 0.06 ENSDART00000093185
ENSDART00000142894
limk2
LIM domain kinase 2
chr22_+_1751640 0.04 ENSDART00000162093
znf1169
zinc finger protein 1169

Network of associatons between targets according to the STRING database.

First level regulatory network of batf2+batf3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 10.0 GO:0051965 positive regulation of synapse assembly(GO:0051965)
0.6 3.2 GO:1903361 protein localization to basolateral plasma membrane(GO:1903361)
0.5 6.3 GO:0032481 positive regulation of type I interferon production(GO:0032481)
0.3 1.3 GO:0048210 Golgi vesicle fusion to target membrane(GO:0048210)
0.2 5.8 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 2.5 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.1 6.3 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.1 0.3 GO:0060019 radial glial cell differentiation(GO:0060019)
0.1 0.5 GO:0032469 endoplasmic reticulum calcium ion homeostasis(GO:0032469)
0.0 1.2 GO:0021952 central nervous system projection neuron axonogenesis(GO:0021952)
0.0 9.4 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 0.1 GO:0055071 manganese ion homeostasis(GO:0055071)
0.0 85.5 GO:0006357 regulation of transcription from RNA polymerase II promoter(GO:0006357)
0.0 3.4 GO:0006821 chloride transport(GO:0006821)
0.0 0.3 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.2 GO:0061154 endothelial tube morphogenesis(GO:0061154) blood vessel lumenization(GO:0072554)
0.0 12.7 GO:0006355 regulation of transcription, DNA-templated(GO:0006355)
0.0 1.5 GO:0010506 regulation of autophagy(GO:0010506)
0.0 1.6 GO:0060026 convergent extension(GO:0060026)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 9.4 GO:0030141 secretory granule(GO:0030141)
0.1 1.7 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.1 0.3 GO:0045293 MIS complex(GO:0036396) mRNA editing complex(GO:0045293)
0.0 3.2 GO:0016323 basolateral plasma membrane(GO:0016323)
0.0 8.8 GO:0045211 postsynaptic membrane(GO:0045211)
0.0 3.4 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.0 14.6 GO:0005783 endoplasmic reticulum(GO:0005783)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.2 GO:0008022 protein C-terminus binding(GO:0008022)
0.3 1.6 GO:1990756 protein binding, bridging involved in substrate recognition for ubiquitination(GO:1990756)
0.2 3.4 GO:0005247 voltage-gated chloride channel activity(GO:0005247)
0.1 5.8 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.3 GO:0001734 mRNA (N6-adenosine)-methyltransferase activity(GO:0001734)
0.1 6.3 GO:0003678 DNA helicase activity(GO:0003678)
0.1 1.2 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.1 6.3 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 10.2 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.1 0.2 GO:0030623 U5 snRNA binding(GO:0030623)
0.0 9.4 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 90.4 GO:0001012 RNA polymerase II regulatory region sequence-specific DNA binding(GO:0000977) RNA polymerase II regulatory region DNA binding(GO:0001012)
0.0 0.1 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.3 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 2.7 GO:0004497 monooxygenase activity(GO:0004497)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 3.2 ST TUMOR NECROSIS FACTOR PATHWAY Tumor Necrosis Factor Pathway.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.8 REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI Genes involved in RIP-mediated NFkB activation via DAI
0.0 0.3 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression