PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene Symbol | Gene ID | Gene Info |
---|---|---|
evx2
|
ENSDARG00000059255 | even-skipped homeobox 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
evx2 | dr11_v1_chr9_+_2002701_2002701 | -0.10 | 3.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_19933356 | 0.54 |
ENSDART00000088819
|
ankrd13a
|
ankyrin repeat domain 13A |
chr9_-_3934963 | 0.52 |
ENSDART00000062336
|
ubr3
|
ubiquitin protein ligase E3 component n-recognin 3 |
chr22_-_21897203 | 0.39 |
ENSDART00000158501
ENSDART00000105566 ENSDART00000136795 |
gna11a
|
guanine nucleotide binding protein (G protein), alpha 11a (Gq class) |
chr19_-_19379084 | 0.38 |
ENSDART00000165206
|
smarcc1b
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b |
chr8_-_15129573 | 0.38 |
ENSDART00000142358
|
bcar3
|
BCAR3, NSP family adaptor protein |
chr17_-_5426458 | 0.33 |
ENSDART00000157937
|
supt3h
|
SPT3 homolog, SAGA and STAGA complex component |
chr7_+_22313533 | 0.32 |
ENSDART00000123457
|
TMEM102
|
si:dkey-11f12.2 |
chr13_-_36663358 | 0.31 |
ENSDART00000085319
|
sos2
|
son of sevenless homolog 2 (Drosophila) |
chr25_+_19666621 | 0.30 |
ENSDART00000112746
|
zgc:171459
|
zgc:171459 |
chr13_-_9257728 | 0.29 |
ENSDART00000145985
ENSDART00000169991 ENSDART00000132764 |
HTRA2 (1 of many)
|
zgc:173425 |
chr2_-_21819421 | 0.29 |
ENSDART00000121586
|
chd7
|
chromodomain helicase DNA binding protein 7 |
chr21_-_13662237 | 0.28 |
ENSDART00000091647
ENSDART00000151547 |
pnpla7a
|
patatin-like phospholipase domain containing 7a |
chr13_-_9213207 | 0.27 |
ENSDART00000139861
ENSDART00000140524 |
HTRA2 (1 of many)
|
si:dkey-33c12.11 |
chr25_-_6049339 | 0.27 |
ENSDART00000075184
|
snx1a
|
sorting nexin 1a |
chr19_+_47476908 | 0.26 |
ENSDART00000157886
|
zgc:114119
|
zgc:114119 |
chr4_+_11464255 | 0.26 |
ENSDART00000008584
|
gdi2
|
GDP dissociation inhibitor 2 |
chr13_-_9159852 | 0.26 |
ENSDART00000170185
ENSDART00000158697 ENSDART00000143393 ENSDART00000164973 ENSDART00000159910 |
HTRA2 (1 of many)
|
si:dkey-112g5.16 |
chr21_-_13661631 | 0.26 |
ENSDART00000184408
|
pnpla7a
|
patatin-like phospholipase domain containing 7a |
chr5_-_25733745 | 0.24 |
ENSDART00000051566
|
zgc:101016
|
zgc:101016 |
chr13_-_9236905 | 0.23 |
ENSDART00000142597
ENSDART00000147176 ENSDART00000181670 |
HTRA2 (1 of many)
si:dkey-112g5.12
|
si:dkey-33c12.12 si:dkey-112g5.12 |
chr13_-_9111927 | 0.23 |
ENSDART00000133815
ENSDART00000109783 ENSDART00000142540 ENSDART00000192613 |
HTRA2 (1 of many)
si:dkey-112g5.12
|
si:dkey-19p15.4 si:dkey-112g5.12 |
chr24_-_25004553 | 0.22 |
ENSDART00000080997
ENSDART00000136860 |
zdhhc20b
|
zinc finger, DHHC-type containing 20b |
chr13_-_9184132 | 0.21 |
ENSDART00000135289
ENSDART00000136309 ENSDART00000132630 |
HTRA2 (1 of many)
|
si:dkey-33c12.10 |
chr13_-_9070754 | 0.21 |
ENSDART00000143783
ENSDART00000102121 ENSDART00000140820 ENSDART00000184210 |
si:dkey-112g5.12
|
si:dkey-112g5.12 |
chr13_+_9468535 | 0.21 |
ENSDART00000135088
ENSDART00000164270 ENSDART00000099619 ENSDART00000164656 |
HTRA2 (1 of many)
|
si:dkey-265c15.6 |
chr9_+_56194410 | 0.20 |
ENSDART00000168530
|
LO018176.1
|
|
chr13_-_9091354 | 0.19 |
ENSDART00000140319
ENSDART00000142697 |
HTRA2 (1 of many)
|
si:dkey-112g5.13 |
chr5_-_67241633 | 0.17 |
ENSDART00000114783
|
clip1a
|
CAP-GLY domain containing linker protein 1a |
chr13_+_9521629 | 0.17 |
ENSDART00000149870
ENSDART00000137666 |
si:dkey-19p15.4
|
si:dkey-19p15.4 |
chr14_+_21820034 | 0.16 |
ENSDART00000122739
|
ctbp1
|
C-terminal binding protein 1 |
chr13_-_9045879 | 0.16 |
ENSDART00000155463
ENSDART00000140041 ENSDART00000137454 |
si:dkey-112g5.11
|
si:dkey-112g5.11 |
chr2_-_1364678 | 0.15 |
ENSDART00000011919
ENSDART00000164674 |
ss18
|
synovial sarcoma translocation, chromosome 18 (H. sapiens) |
chr9_+_1313418 | 0.13 |
ENSDART00000191361
|
casp8l2
|
caspase 8, apoptosis-related cysteine peptidase, like 2 |
chr21_+_4410733 | 0.11 |
ENSDART00000136831
ENSDART00000131612 |
HTRA2 (1 of many)
|
si:dkey-84o3.7 |
chr2_+_10007113 | 0.11 |
ENSDART00000155213
|
slc35a3b
|
solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3b |
chr15_-_18115540 | 0.11 |
ENSDART00000131639
ENSDART00000047902 |
arcn1b
|
archain 1b |
chr21_+_4328348 | 0.10 |
ENSDART00000131658
ENSDART00000143799 |
HTRA2 (1 of many)
|
si:dkey-84o3.7 |
chr21_+_4429001 | 0.10 |
ENSDART00000134520
|
HTRA2 (1 of many)
|
si:dkey-84o3.6 |
chr18_+_7639401 | 0.10 |
ENSDART00000092416
|
rabl2
|
RAB, member of RAS oncogene family-like 2 |
chr2_-_26720854 | 0.09 |
ENSDART00000148110
|
si:dkey-181m9.8
|
si:dkey-181m9.8 |
chr21_+_4348600 | 0.08 |
ENSDART00000138463
|
HTRA2 (1 of many)
|
si:dkey-84o3.2 |
chr11_+_5588122 | 0.04 |
ENSDART00000113281
|
zgc:172302
|
zgc:172302 |
chr11_+_38280454 | 0.03 |
ENSDART00000171496
|
CDK18
|
si:dkey-166c18.1 |
chr24_-_35282568 | 0.02 |
ENSDART00000167406
ENSDART00000088609 |
sntg1
|
syntrophin, gamma 1 |
chr5_-_67629263 | 0.01 |
ENSDART00000133753
|
zbtb20
|
zinc finger and BTB domain containing 20 |
chr3_+_23692462 | 0.01 |
ENSDART00000145934
|
hoxb7a
|
homeobox B7a |
chr11_+_29790626 | 0.01 |
ENSDART00000067822
|
dynlt3
|
dynein, light chain, Tctex-type 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.5 | GO:0071596 | ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596) |
0.0 | 0.3 | GO:0034498 | early endosome to Golgi transport(GO:0034498) |
0.0 | 0.2 | GO:0031116 | positive regulation of microtubule polymerization(GO:0031116) |
0.0 | 0.1 | GO:0051645 | Golgi localization(GO:0051645) |
0.0 | 0.3 | GO:0048796 | rRNA transcription(GO:0009303) swim bladder maturation(GO:0048796) swim bladder inflation(GO:0048798) |
0.0 | 0.4 | GO:0033138 | positive regulation of peptidyl-serine phosphorylation(GO:0033138) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0030914 | STAGA complex(GO:0030914) |
0.0 | 0.3 | GO:0030904 | retromer complex(GO:0030904) |
0.0 | 0.4 | GO:0071564 | npBAF complex(GO:0071564) |
0.0 | 0.1 | GO:0071797 | LUBAC complex(GO:0071797) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:0005093 | Rab GDP-dissociation inhibitor activity(GO:0005093) |
0.0 | 0.4 | GO:0031826 | type 2A serotonin receptor binding(GO:0031826) |
0.0 | 0.1 | GO:0005459 | UDP-galactose transmembrane transporter activity(GO:0005459) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 0.3 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 0.3 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 0.3 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.4 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |