Project

PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish

Navigation
Downloads

Results for prdm14

Z-value: 0.76

Motif logo

Transcription factors associated with prdm14

Gene Symbol Gene ID Gene Info
ENSDARG00000045371 PR domain containing 14

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
prdm14dr11_v1_chr24_+_14451404_144514040.277.6e-03Click!

Activity profile of prdm14 motif

Sorted Z-values of prdm14 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr20_+_27020201 15.82 ENSDART00000126919
ENSDART00000016014
chromogranin A
chr11_-_23080970 10.43 ENSDART00000127791
ATPase plasma membrane Ca2+ transporting 2
chr14_-_30642819 10.39 ENSDART00000078154
neuronal PAS domain protein 4a
chr25_-_8030425 8.27 ENSDART00000014964
calcium/calmodulin-dependent protein kinase 1Db
chr21_-_43949208 7.69 ENSDART00000150983
calcium/calmodulin-dependent protein kinase II alpha
chr5_-_45877387 6.34 ENSDART00000183714
ENSDART00000041503
solute carrier family 4 (sodium bicarbonate cotransporter), member 4a
chr10_-_43721530 5.74 ENSDART00000025366
centrin 3
chr21_-_21089781 5.71 ENSDART00000144361
ankyrin 1, erythrocytic b
chr11_-_18791834 5.65 ENSDART00000156431
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b
chr4_-_22207873 5.62 ENSDART00000142140
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr25_-_8030113 5.61 ENSDART00000104674
calcium/calmodulin-dependent protein kinase 1Db
chr5_+_49744713 5.23 ENSDART00000133384
nuclear receptor subfamily 2, group F, member 1a
chr22_-_26323893 5.10 ENSDART00000105099
calpain 1, (mu/I) large subunit b
chr22_-_20342260 4.91 ENSDART00000161610
ENSDART00000165667
transcription factor 3b
chr8_-_25566347 4.74 ENSDART00000138289
ENSDART00000078022
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
chr22_-_11137268 4.40 ENSDART00000178882
ATPase H+ transporting accessory protein 2
chr1_+_41849152 4.39 ENSDART00000053685
spermine oxidase
chr12_+_39685485 4.38 ENSDART00000163403

chr23_+_39558508 4.07 ENSDART00000017902
calcium/calmodulin-dependent protein kinase IGb
chr7_+_13418812 3.91 ENSDART00000191905
ENSDART00000091567
diacylglycerol lipase, alpha
chr22_-_11136625 3.86 ENSDART00000016873
ENSDART00000125561
ATPase H+ transporting accessory protein 2
chr5_+_37903790 3.25 ENSDART00000162470
transmembrane protease, serine 4b
chr1_+_46509176 3.15 ENSDART00000166028
mcf.2 cell line derived transforming sequence-like a
chr5_-_67115872 3.09 ENSDART00000065262
ribosomal protein S6 kinase, polypeptide 4
chr2_-_32826108 3.07 ENSDART00000098834
pre-mRNA processing factor 4Ba
chr20_-_46467280 3.05 ENSDART00000060702
regulator of microtubule dynamics 3
chr17_+_27162367 3.00 ENSDART00000193345
ribosomal protein S6 kinase a, polypeptide 1
chr6_-_24384654 2.99 ENSDART00000164723
bromodomain, testis-specific
chr7_+_48806420 2.87 ENSDART00000083431
carnitine palmitoyltransferase 1Aa (liver)
chr10_-_32877348 2.86 ENSDART00000018977
ENSDART00000133421
RAB guanine nucleotide exchange factor (GEF) 1
chr25_-_1235457 2.85 ENSDART00000093093
coronin, actin binding protein, 2Bb
chr5_-_65081600 2.54 ENSDART00000160850
inositol polyphosphate-5-phosphatase E
chr16_+_32014552 2.50 ENSDART00000047570
membrane bound O-acyltransferase domain containing 7
chr8_-_25716074 2.46 ENSDART00000007482
testis specific protein, Y-linked
chr21_-_14692119 2.46 ENSDART00000123047
euchromatic histone-lysine N-methyltransferase 1b
chr25_+_16043246 2.40 ENSDART00000186663
sb:cb470
chr7_+_48805534 2.22 ENSDART00000145375
ENSDART00000148744
carnitine palmitoyltransferase 1Aa (liver)
chr24_+_26402110 2.19 ENSDART00000133684
si:ch211-230g15.5
chr9_+_33261330 2.16 ENSDART00000135384
ubiquitin specific peptidase 9
chr20_+_51061695 2.12 ENSDART00000134416
im:7140055
chr9_-_33477588 2.12 ENSDART00000144150
calcium/calmodulin-dependent serine protein kinase a
chr23_+_21261313 2.08 ENSDART00000104268
ENSDART00000159046
ER membrane protein complex subunit 1
chr8_+_35172594 2.06 ENSDART00000177146

chr22_+_39074688 1.88 ENSDART00000153547
inositol hexakisphosphate kinase 1
chr7_+_48805725 1.87 ENSDART00000166543
carnitine palmitoyltransferase 1Aa (liver)
chr5_+_51833305 1.77 ENSDART00000165276
ENSDART00000166443
PAP associated domain containing 4
chr21_+_44300689 1.76 ENSDART00000186298
ENSDART00000142810
gamma-aminobutyric acid (GABA) A receptor, alpha 3
chr5_-_69482891 1.74 ENSDART00000109487

chr15_+_20363859 1.73 ENSDART00000166846
SPT5 homolog, DSIF elongation factor subunit
chr5_+_26079178 1.70 ENSDART00000145920
si:dkey-201c13.2
chr15_+_19293744 1.69 ENSDART00000184994
ENSDART00000123815
junctional adhesion molecule 3a
chr5_+_28271412 1.63 ENSDART00000031727
vesicle-associated membrane protein 8 (endobrevin)
chr7_+_51324834 1.35 ENSDART00000114429
ubiquitin specific peptidase 12b
chr23_+_5104743 1.35 ENSDART00000123191
ubiquitin-conjugating enzyme E2T (putative)
chr5_+_51833132 1.32 ENSDART00000167491
PAP associated domain containing 4
chr6_+_18142623 1.27 ENSDART00000169431
ENSDART00000158841
si:dkey-237i9.8
chr17_+_25871304 1.27 ENSDART00000185143
WAPL cohesin release factor a
chr23_+_9522781 1.26 ENSDART00000136486
oxysterol binding protein-like 2b
chr6_-_21534301 1.26 ENSDART00000126186
proteasome 26S subunit, non-ATPase 12
chr20_-_51727860 1.20 ENSDART00000147044
BRO1 domain and CAAX motif containing
chr2_-_36819624 1.20 ENSDART00000140844
SLIT and NTRK-like family, member 3b
chr14_-_30897177 1.18 ENSDART00000087918
solute carrier family 7 (cationic amino acid transporter, y+ system), member 3b
chr13_+_18321140 1.18 ENSDART00000180947
eukaryotic translation initiation factor 4E family member 1c
chr23_+_9522942 1.17 ENSDART00000137751
oxysterol binding protein-like 2b
chr2_+_32826235 1.14 ENSDART00000143127
si:dkey-154p10.3
chr13_+_23157053 1.05 ENSDART00000162359
sorbin and SH3 domain containing 1
chr15_-_42760110 1.03 ENSDART00000152490
si:ch211-181d7.3
chr16_-_24135508 0.95 ENSDART00000171819
ENSDART00000103176
basal cell adhesion molecule (Lutheran blood group)
chr21_-_27272657 0.93 ENSDART00000040754
ENSDART00000175009
MAP/microtubule affinity-regulating kinase 2a
chr12_-_6818676 0.90 ENSDART00000106391
protocadherin-related 15b
chr23_-_27442544 0.89 ENSDART00000019521
disco-interacting protein 2 homolog Ba
chr15_-_21837207 0.81 ENSDART00000089953
salt-inducible kinase 2b
chr2_-_37458527 0.80 ENSDART00000146820
si:dkey-57k2.7
chr13_+_49727333 0.79 ENSDART00000168799
ENSDART00000037559
geranylgeranyl diphosphate synthase 1
chr4_+_30775376 0.73 ENSDART00000158528
si:dkey-11d20.1
chr20_-_4049862 0.70 ENSDART00000158057
SprT-like N-terminal domain
chr6_-_21988375 0.67 ENSDART00000161257
plexin b1b
chr11_+_13642157 0.65 ENSDART00000060251
WD repeat domain 18
chr22_-_9890386 0.65 ENSDART00000132304
si:dkey-253d23.5
chr7_+_13491452 0.59 ENSDART00000053535
ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like
chr9_-_34945566 0.55 ENSDART00000131908
ENSDART00000059861
DCN1, defective in cullin neddylation 1, domain containing 2a
chr17_+_28675120 0.54 ENSDART00000159067
HECT domain containing 1
chr11_+_31380495 0.53 ENSDART00000185073
signal-induced proliferation-associated 1 like 2
chr19_-_4851411 0.40 ENSDART00000110398
F-box and leucine-rich repeat protein 20
chr9_+_8364553 0.32 ENSDART00000190713
si:dkey-90l23.2
chr13_+_4871886 0.32 ENSDART00000132301
mitochondrial calcium uptake 1
chr6_+_518979 0.27 ENSDART00000151012
si:ch73-379f7.5
chr17_-_42492668 0.15 ENSDART00000183946

chr5_+_62988916 0.13 ENSDART00000123243
translocase of inner mitochondrial membrane 22
chr21_-_27273147 0.09 ENSDART00000143239
MAP/microtubule affinity-regulating kinase 2a

Network of associatons between targets according to the STRING database.

First level regulatory network of prdm14

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
5.3 15.8 GO:0090278 negative regulation of peptide secretion(GO:0002792) negative regulation of peptide hormone secretion(GO:0090278)
2.1 10.4 GO:0060080 inhibitory postsynaptic potential(GO:0060080)
1.0 3.0 GO:0051037 histone displacement(GO:0001207) regulation of transcription involved in meiotic cell cycle(GO:0051037) positive regulation of transcription involved in meiotic cell cycle(GO:0051039)
1.0 3.9 GO:0098920 endocannabinoid signaling pathway(GO:0071926) retrograde trans-synaptic signaling by lipid(GO:0098920) retrograde trans-synaptic signaling by endocannabinoid(GO:0098921)
0.7 7.0 GO:0031998 regulation of fatty acid beta-oxidation(GO:0031998)
0.6 2.5 GO:0036149 phosphatidylinositol acyl-chain remodeling(GO:0036149)
0.6 4.1 GO:0045475 locomotor rhythm(GO:0045475)
0.6 5.2 GO:0055011 atrial cardiac muscle cell differentiation(GO:0055011)
0.5 3.1 GO:0016572 histone phosphorylation(GO:0016572)
0.4 1.3 GO:0060623 regulation of chromosome condensation(GO:0060623)
0.4 5.6 GO:0006003 fructose 2,6-bisphosphate metabolic process(GO:0006003)
0.3 1.7 GO:0001961 positive regulation of cytokine-mediated signaling pathway(GO:0001961) positive regulation of response to cytokine stimulus(GO:0060760)
0.3 8.3 GO:0035622 intrahepatic bile duct development(GO:0035622)
0.3 6.3 GO:0015701 bicarbonate transport(GO:0015701)
0.3 1.6 GO:0070254 mucus secretion(GO:0070254)
0.2 2.4 GO:0001881 receptor recycling(GO:0001881)
0.2 1.2 GO:0097638 L-arginine import(GO:0043091) amino acid import across plasma membrane(GO:0089718) arginine import(GO:0090467) L-arginine import across plasma membrane(GO:0097638) L-arginine transport(GO:1902023) L-arginine import into cell(GO:1902765) amino acid import into cell(GO:1902837) L-arginine transmembrane transport(GO:1903400) arginine transmembrane transport(GO:1903826)
0.2 4.7 GO:0038092 nodal signaling pathway(GO:0038092)
0.1 2.5 GO:1902017 regulation of cilium assembly(GO:1902017)
0.1 7.7 GO:0003146 heart jogging(GO:0003146)
0.1 0.7 GO:0042769 DNA damage response, detection of DNA damage(GO:0042769)
0.1 0.9 GO:1901985 positive regulation of protein acetylation(GO:1901985) positive regulation of peptidyl-lysine acetylation(GO:2000758)
0.1 1.9 GO:0032958 inositol phosphate biosynthetic process(GO:0032958)
0.1 0.9 GO:0050962 detection of light stimulus involved in visual perception(GO:0050908) detection of light stimulus involved in sensory perception(GO:0050962)
0.1 16.9 GO:0018105 peptidyl-serine phosphorylation(GO:0018105)
0.1 1.8 GO:0051932 synaptic transmission, GABAergic(GO:0051932)
0.1 1.4 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 0.3 GO:0051561 positive regulation of mitochondrial calcium ion concentration(GO:0051561)
0.0 9.7 GO:0070588 calcium ion transmembrane transport(GO:0070588)
0.0 0.7 GO:0090329 regulation of DNA-dependent DNA replication(GO:0090329)
0.0 0.6 GO:0045116 protein neddylation(GO:0045116) positive regulation of ubiquitin-protein transferase activity(GO:0051443)
0.0 2.5 GO:0034968 histone lysine methylation(GO:0034968)
0.0 0.7 GO:1902287 semaphorin-plexin signaling pathway involved in neuron projection guidance(GO:1902285) semaphorin-plexin signaling pathway involved in axon guidance(GO:1902287)
0.0 4.9 GO:0072659 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 5.6 GO:0050808 synapse organization(GO:0050808)
0.0 2.5 GO:0006334 nucleosome assembly(GO:0006334)
0.0 3.5 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.8 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.8 GO:0008299 isoprenoid biosynthetic process(GO:0008299)
0.0 0.5 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.0 0.6 GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 15.8 GO:0042583 chromaffin granule(GO:0042583)
0.6 2.5 GO:0044233 ER-mitochondrion membrane contact site(GO:0044233)
0.6 1.7 GO:0032044 DSIF complex(GO:0032044)
0.5 8.3 GO:0032591 dendritic spine membrane(GO:0032591)
0.3 3.1 GO:0097431 mitotic spindle pole(GO:0097431)
0.2 10.4 GO:0099634 postsynaptic density membrane(GO:0098839) postsynaptic specialization membrane(GO:0099634)
0.2 2.1 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 1.3 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.1 2.2 GO:0035102 PRC1 complex(GO:0035102)
0.1 1.8 GO:0032590 neuron projection membrane(GO:0032589) dendrite membrane(GO:0032590)
0.1 6.3 GO:0016323 basolateral plasma membrane(GO:0016323)
0.1 7.0 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.1 3.9 GO:0045211 postsynaptic membrane(GO:0045211)
0.1 4.8 GO:0048786 presynaptic active zone(GO:0048786)
0.1 1.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.9 GO:0032420 stereocilium(GO:0032420)
0.0 0.7 GO:0002116 semaphorin receptor complex(GO:0002116)
0.0 0.3 GO:1990246 uniplex complex(GO:1990246)
0.0 0.9 GO:0043204 perikaryon(GO:0043204)
0.0 1.6 GO:0031201 SNARE complex(GO:0031201)
0.0 12.3 GO:0043005 neuron projection(GO:0043005)
0.0 20.3 GO:0005829 cytosol(GO:0005829)
0.0 5.7 GO:0005815 microtubule organizing center(GO:0005815)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 7.0 GO:0016416 carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416)
0.9 4.4 GO:0046592 polyamine oxidase activity(GO:0046592)
0.5 25.6 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.5 6.3 GO:0008510 sodium:bicarbonate symporter activity(GO:0008510)
0.4 5.7 GO:0030507 spectrin binding(GO:0030507)
0.4 5.6 GO:0003873 6-phosphofructo-2-kinase activity(GO:0003873)
0.4 10.4 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.4 3.9 GO:0004465 lipoprotein lipase activity(GO:0004465)
0.2 3.0 GO:0004711 ribosomal protein S6 kinase activity(GO:0004711)
0.2 2.5 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445)
0.2 3.0 GO:0070577 lysine-acetylated histone binding(GO:0070577)
0.2 1.2 GO:0015189 L-lysine transmembrane transporter activity(GO:0015189)
0.2 5.1 GO:0004198 calcium-dependent cysteine-type endopeptidase activity(GO:0004198)
0.2 2.5 GO:0002039 p53 binding(GO:0002039)
0.1 1.8 GO:0022851 benzodiazepine receptor activity(GO:0008503) GABA-gated chloride ion channel activity(GO:0022851)
0.1 2.5 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.1 1.9 GO:0000828 inositol hexakisphosphate kinase activity(GO:0000828)
0.1 2.4 GO:0015248 sterol transporter activity(GO:0015248)
0.1 1.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 3.3 GO:0005044 scavenger receptor activity(GO:0005044)
0.0 1.0 GO:0050321 tau-protein kinase activity(GO:0050321)
0.0 5.2 GO:0004879 RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding(GO:0004879)
0.0 0.8 GO:0004659 prenyltransferase activity(GO:0004659)
0.0 1.1 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 1.4 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 3.5 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005)
0.0 8.8 GO:0008017 microtubule binding(GO:0008017)
0.0 7.9 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.7 GO:0017154 semaphorin receptor activity(GO:0017154)
0.0 0.7 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 1.6 GO:0019905 syntaxin binding(GO:0019905)
0.0 8.8 GO:0046983 protein dimerization activity(GO:0046983)
0.0 2.1 GO:0000287 magnesium ion binding(GO:0000287)
0.0 2.6 GO:0042393 histone binding(GO:0042393)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 7.7 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.4 8.3 PID WNT SIGNALING PATHWAY Wnt signaling network
0.2 7.7 SIG PIP3 SIGNALING IN B LYMPHOCYTES Genes related to PIP3 signaling in B lymphocytes
0.1 3.9 PID NCADHERIN PATHWAY N-cadherin signaling events
0.1 2.9 PID RAS PATHWAY Regulation of Ras family activation
0.1 3.1 PID P38 ALPHA BETA DOWNSTREAM PATHWAY Signaling mediated by p38-alpha and p38-beta
0.0 1.0 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 1.4 PID FANCONI PATHWAY Fanconi anemia pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.6 7.7 REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION Genes involved in Unblocking of NMDA receptor, glutamate binding and activation
0.6 2.5 REACTOME ACYL CHAIN REMODELLING OF PI Genes involved in Acyl chain remodelling of PI
0.5 10.4 REACTOME PLATELET CALCIUM HOMEOSTASIS Genes involved in Platelet calcium homeostasis
0.3 4.4 REACTOME METABOLISM OF POLYAMINES Genes involved in Metabolism of polyamines
0.3 3.0 REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF RAS Genes involved in CREB phosphorylation through the activation of Ras
0.2 3.1 REACTOME RECYCLING PATHWAY OF L1 Genes involved in Recycling pathway of L1
0.2 3.9 REACTOME EFFECTS OF PIP2 HYDROLYSIS Genes involved in Effects of PIP2 hydrolysis
0.1 2.5 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.1 1.8 REACTOME GABA A RECEPTOR ACTIVATION Genes involved in GABA A receptor activation
0.1 4.7 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.1 1.7 REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT Genes involved in Abortive elongation of HIV-1 transcript in the absence of Tat
0.1 1.4 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.0 1.0 REACTOME SMOOTH MUSCLE CONTRACTION Genes involved in Smooth Muscle Contraction
0.0 0.8 REACTOME CHOLESTEROL BIOSYNTHESIS Genes involved in Cholesterol biosynthesis
0.0 1.3 REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC Genes involved in Regulation of ornithine decarboxylase (ODC)