PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
zic3 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000071497	zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila)

Gene	Promoter	Pearson corr. coef.	P-value	Plot
zic3	dr11_v1_chr14_-_32016615_32016615	0.16	1.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr20_+_27194833 Show fit	3.37	ENSDART00000150072	si:dkey-85n7.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-85n7.8
chr19_+_23982466 Show fit	1.07	ENSDART00000080673	syt11a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptotagmin XIa
chr22_-_10487490 Show fit	0.88	ENSDART00000064798	aspn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	asporin (LRR class 1)
chr22_-_37565348 Show fit	0.75	ENSDART00000149482 ENSDART00000104478	fxr1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fragile X mental retardation, autosomal homolog 1
chr12_-_26582607 Show fit	0.51	ENSDART00000045186	slc16a5a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 16 (monocarboxylate transporter), member 5a
chr9_+_23770666 Show fit	0.51	ENSDART00000182493	si:ch211-219a4.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-219a4.3
chr2_-_30784198 Show fit	0.43	ENSDART00000182523 ENSDART00000147355	rgs20 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	regulator of G protein signaling 20
chr6_+_27090800 Show fit	0.39	ENSDART00000121558	atg4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	autophagy related 4B, cysteine peptidase
chr25_-_34740627 Show fit	0.39	ENSDART00000137665	frs2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibroblast growth factor receptor substrate 2b
chr5_-_22615087 Show fit	0.39	ENSDART00000146035	zgc:113208 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113208
chr21_-_30415524 Show fit	0.36	ENSDART00000101036	grpel2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GrpE-like 2, mitochondrial
chr11_+_34921492 Show fit	0.26	ENSDART00000128070	gnai2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a
chr4_-_56157199 Show fit	0.23	ENSDART00000169806	si:ch211-207e19.15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-207e19.15
chr8_+_49096486 Show fit	0.18	ENSDART00000192998	zgc:56525 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:56525
chr8_-_40075983 Show fit	0.18	ENSDART00000141455	ggt1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gamma-glutamyltransferase 1a
chr6_+_83873 Show fit	0.15	ENSDART00000162145	SMARCA4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
chr12_+_27117609 Show fit	0.06	ENSDART00000076154	hoxb8b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	homeobox B8b
chr19_+_9050852 Show fit	0.06	ENSDART00000151031	ash1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ash1 (absent, small, or homeotic)-like (Drosophila)
chr21_-_45073764 Show fit	0.04	ENSDART00000181390 ENSDART00000063714	rapgef6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rap guanine nucleotide exchange factor (GEF) 6
chr23_-_14057191 Show fit	0.03	ENSDART00000154908	adcy6a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adenylate cyclase 6a
chr20_-_40725142 Show fit	0.03	ENSDART00000181279	cx32.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 32.2
chr2_+_2918759 Show fit	0.02	ENSDART00000161255	CABZ01112864.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr22_-_6988102 Show fit	0.00	ENSDART00000185618	fgfr1bl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibroblast growth factor receptor 1b, like
chr21_-_21465111 Show fit	0.00	ENSDART00000141487	nectin3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nectin cell adhesion molecule 3b

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	3.4	GO:0006119	oxidative phosphorylation(GO:0006119)
0.0	0.8	GO:0051489	regulation of filopodium assembly(GO:0051489)
0.0	0.3	GO:0001973	adenosine receptor signaling pathway(GO:0001973) purinergic receptor signaling pathway(GO:0035587) G-protein coupled purinergic receptor signaling pathway(GO:0035588)
0.0	1.1	GO:0014046	dopamine secretion(GO:0014046) regulation of dopamine secretion(GO:0014059)
0.0	0.2	GO:0031179	peptide modification(GO:0031179)
0.0	0.4	GO:0030150	protein import into mitochondrial matrix(GO:0030150)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.8	GO:1902737	dendritic spine neck(GO:0044326) dendritic filopodium(GO:1902737)
0.2	3.4	GO:0045277	respiratory chain complex IV(GO:0045277)
0.1	0.4	GO:0001405	presequence translocase-associated import motor(GO:0001405)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	3.4	GO:0015002	cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0	0.4	GO:0000774	adenyl-nucleotide exchange factor activity(GO:0000774)
0.0	0.9	GO:0005518	collagen binding(GO:0005518)
0.0	1.1	GO:0001786	phosphatidylserine binding(GO:0001786)
0.0	0.2	GO:0036374	peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.0	0.8	GO:0045182	translation regulator activity(GO:0045182)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.9	NABA PROTEOGLYCANS	Genes encoding proteoglycans