Project

PRJNA195909:zebrafish embryo and larva development

Navigation
Downloads

Results for nkx2.4a+nkx2.4b

Z-value: 0.33

Motif logo

Transcription factors associated with nkx2.4a+nkx2.4b

Gene Symbol Gene ID Gene Info
ENSDARG00000075107 NK2 homeobox 4a
ENSDARG00000104107 NK2 homeobox 4b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nkx2.4adr11_v1_chr17_-_42097267_420972670.827.2e-03Click!
nkx2.4bdr11_v1_chr20_+_48803248_488032480.808.9e-03Click!

Activity profile of nkx2.4a+nkx2.4b motif

Sorted Z-values of nkx2.4a+nkx2.4b motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_+_25696798 0.41 ENSDART00000054228
lecithin retinol acyltransferase a
chr2_+_42724404 0.38 ENSDART00000075392
brain abundant, membrane attached signal protein 1
chr7_-_35708450 0.36 ENSDART00000193886
iroquois homeobox 5a
chr14_-_26536504 0.34 ENSDART00000105933
transforming growth factor, beta-induced
chr15_+_9072821 0.33 ENSDART00000154463
si:dkey-202g17.3
chr12_-_16898140 0.32 ENSDART00000152656
Cathepsin L1-like
chr7_+_25323742 0.32 ENSDART00000110347
cytochrome P450, family 26, subfamily b, polypeptide 1
chr9_-_23033818 0.31 ENSDART00000022392
Rho family GTPase 3b
chr22_+_12770877 0.31 ENSDART00000044683
formimidoyltransferase cyclodeaminase
chr17_+_27434626 0.31 ENSDART00000052446
vestigial-like family member 2b
chr10_+_21807497 0.28 ENSDART00000164634
protocadherin 1 gamma 32
chr8_+_39607466 0.27 ENSDART00000097427
musashi RNA-binding protein 1
chr10_+_31244619 0.27 ENSDART00000145562
ENSDART00000184412
roundabout, axon guidance receptor, homolog 4 (Drosophila)
chr20_+_48782068 0.25 ENSDART00000159275
NK2 homeobox 2b
chr1_-_21599219 0.25 ENSDART00000148327
ADAMTS-like 7
chr12_-_16720432 0.24 ENSDART00000152261
ENSDART00000152154
si:dkey-26g8.4
chr19_+_10847118 0.23 ENSDART00000189784
apolipoprotein A-IV a
chr15_-_26552393 0.23 ENSDART00000150152
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b
chr6_-_13114821 0.21 ENSDART00000164579
ENSDART00000165375
zgc:194469
chr5_-_33460959 0.21 ENSDART00000085636
si:ch211-182d3.1
chr17_-_42213285 0.20 ENSDART00000140549
NK2 homeobox 2a
chr8_-_49345388 0.18 ENSDART00000053203
proteolipid protein 2
chr9_+_7724152 0.17 ENSDART00000061716
motor neuron and pancreas homeobox 2a
chr13_-_13294847 0.17 ENSDART00000125883
ENSDART00000013534
fibroblast growth factor receptor 3
chr4_+_15942075 0.17 ENSDART00000147964
si:dkey-117n7.2
chr24_+_3307857 0.17 ENSDART00000106527
glycogenin 1b
chr1_-_14234076 0.16 ENSDART00000040049
calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2
chr15_-_26552652 0.16 ENSDART00000152336
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b
chr15_-_8517555 0.16 ENSDART00000140213
neuronal PAS domain protein 1
chr15_-_12011390 0.15 ENSDART00000187403
si:dkey-202l22.6
chr1_-_14233815 0.14 ENSDART00000044896
calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2
chr8_+_23485079 0.14 ENSDART00000026316
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb
chr21_-_41147818 0.13 ENSDART00000167339
ENSDART00000192730
muscle segment homeobox 2b
chr4_+_22365061 0.12 ENSDART00000039277
LHFPL tetraspan subfamily member 3
chr3_+_33340939 0.12 ENSDART00000128786
peptide YYa
chr19_+_23982466 0.12 ENSDART00000080673
synaptotagmin XIa
chr21_+_17110598 0.12 ENSDART00000101282
ENSDART00000191864
breakpoint cluster region
chr23_+_6795709 0.12 ENSDART00000149136
si:ch211-117c9.5
chr7_-_35126374 0.11 ENSDART00000141211
hydroxysteroid (11-beta) dehydrogenase 2
chr1_-_38816685 0.11 ENSDART00000075230
ankyrin repeat and SOCS box containing 5b
chr9_-_35155089 0.11 ENSDART00000077901
amyloid beta (A4) precursor protein b
chr11_+_36158134 0.11 ENSDART00000189827
ENSDART00000163330
glutamate receptor, metabotropic 2b
chr19_-_27776649 0.11 ENSDART00000135348
adenylate cyclase 2b (brain)
chr21_-_14310159 0.10 ENSDART00000155097
si:ch211-196i2.1
chr6_+_58832155 0.10 ENSDART00000144842
dynactin 2 (p50)
chr6_-_13114406 0.10 ENSDART00000188015
zgc:194469
chr17_+_43032529 0.10 ENSDART00000055611
ENSDART00000154863
iron-sulfur cluster assembly 2
chr10_-_9346360 0.10 ENSDART00000039536
mitochondrial ribosome recycling factor
chr14_+_14225048 0.10 ENSDART00000168749
neuroligin 3a
chr8_+_48480529 0.10 ENSDART00000186631
si:ch211-263k4.2
chr9_+_25832329 0.10 ENSDART00000130059
zinc finger E-box binding homeobox 2a
chr17_-_42213822 0.09 ENSDART00000187904
ENSDART00000180029
NK2 homeobox 2a
chr4_-_13580348 0.09 ENSDART00000067160
opsin 1 (cone pigments), short-wave-sensitive 1
chr22_-_36856405 0.09 ENSDART00000029588
kininogen 1
chr10_-_32524035 0.09 ENSDART00000137608
diacylglycerol O-acyltransferase 2
chr8_-_23776399 0.09 ENSDART00000114800
si:ch211-163l21.4
chr8_-_17516448 0.09 ENSDART00000100667
v-ski avian sarcoma viral oncogene homolog a
chr20_-_38449903 0.09 ENSDART00000136303
inositol-trisphosphate 3-kinase B
chr20_+_54738210 0.08 ENSDART00000151399
p21 protein (Cdc42/Rac)-activated kinase 7
chr25_-_27842654 0.08 ENSDART00000154852
ENSDART00000156906
ankyrin repeat and SOCS box containing 15a
chr25_+_19485198 0.08 ENSDART00000156730
glutaminase like
chr20_+_27020201 0.08 ENSDART00000126919
ENSDART00000016014
chromogranin A
chr7_+_59649399 0.08 ENSDART00000123520
ENSDART00000040771
ribosomal protein L34
chr14_+_21106444 0.07 ENSDART00000075744
ENSDART00000132363
aldolase b, fructose-bisphosphate
chr16_+_24971717 0.07 ENSDART00000156958
formyl peptide receptor 1
chr9_+_18716485 0.07 ENSDART00000135125
stress-associated endoplasmic reticulum protein family member 2
chr4_+_17245217 0.07 ENSDART00000184215
ENSDART00000110908
cancer susceptibility candidate 1
chr5_+_34981584 0.06 ENSDART00000134795
ankyrin repeat, family A (RFXANK-like), 2
chr23_-_26532696 0.06 ENSDART00000124811
ENSDART00000180274
si:dkey-205h13.2
chr22_+_3223489 0.06 ENSDART00000082011
lens intrinsic membrane protein 2.2
chr8_-_25120231 0.06 ENSDART00000147308
adhesion molecule with Ig-like domain 1
chr21_+_30084823 0.06 ENSDART00000154573
proline-rich basic protein 1
chr21_+_19062124 0.06 ENSDART00000134746
ribosomal protein L17
chr5_+_53824959 0.06 ENSDART00000169565
spermidine/spermine N1-acetyltransferase family member 2b
chr14_+_8343498 0.06 ENSDART00000164551
neuregulin 2b
chr5_+_32882688 0.06 ENSDART00000008807
ENSDART00000185317
ribosomal protein L12
chr3_+_32557615 0.05 ENSDART00000151608
paired box 10
chr6_-_42073367 0.05 ENSDART00000154304
glutamate receptor, metabotropic 2a
chr7_-_18601206 0.05 ENSDART00000111636
si:ch211-119e14.2
chr14_+_23709134 0.05 ENSDART00000191162
ENSDART00000179754
ENSDART00000054266
glucosamine-6-phosphate deaminase 1
chr12_+_10599604 0.05 ENSDART00000152538
leucine rich repeat containing 3Ca
chr17_+_8184649 0.05 ENSDART00000091818
tubby like protein 4b
chr14_+_14224730 0.05 ENSDART00000180112
ENSDART00000184891
ENSDART00000174760
neuroligin 3a
chr17_-_22552678 0.04 ENSDART00000079401
si:ch211-125o16.4
chr15_-_23485752 0.04 ENSDART00000152706
NLR family member X1
chr4_+_65649267 0.04 ENSDART00000184068
si:dkey-205i10.1
chr14_-_17622080 0.04 ENSDART00000112149
si:ch211-159i8.4
chr7_-_61842593 0.04 ENSDART00000023770
HtrA serine peptidase 3
chr9_-_12811936 0.04 ENSDART00000188490
myosin X-like 3
chr16_-_34258931 0.04 ENSDART00000145485
phosphatase and actin regulator 4b
chr25_-_12730260 0.04 ENSDART00000171834
kelch domain containing 4
chr7_-_5039562 0.04 ENSDART00000154438
leukotriene B4 receptor
chr13_-_2112008 0.04 ENSDART00000110814
family with sequence similarity 83, member B
chr14_-_8816933 0.04 ENSDART00000163383
si:dkeyp-115e12.7
chr7_+_60551133 0.04 ENSDART00000148038
leucine rich repeat and fibronectin type III domain containing 4b
chr24_-_205275 0.04 ENSDART00000108762
VOPP1, WBP1/VOPP1 family member
chr2_+_16652238 0.04 ENSDART00000091351
glycerol kinase 5 (putative)
chr6_+_374875 0.03 ENSDART00000171698
si:zfos-169g10.3
chr16_-_11766265 0.03 ENSDART00000141547
zgc:158701
chr10_+_8481660 0.03 ENSDART00000109559

chr22_-_28373698 0.03 ENSDART00000157592
si:ch211-213c4.5
chr3_-_39305291 0.03 ENSDART00000102674
phospholipase C, delta 3a
chr20_+_27464721 0.03 ENSDART00000189552
kinesin family member 26Aa
chr3_+_58354852 0.03 ENSDART00000155715
von Willebrand factor A domain containing 3A
chr4_+_77038392 0.03 ENSDART00000186818
si:dkey-172k15.6
chr1_-_11291324 0.03 ENSDART00000091205
sidekick cell adhesion molecule 1b
chr14_+_23158021 0.03 ENSDART00000084664
ecto-NOX disulfide-thiol exchanger 2
chr13_+_25761279 0.03 ENSDART00000177818
ENSDART00000002863
neurogenin 3
chr22_+_19111444 0.03 ENSDART00000109655
fibroblast growth factor 22
chr12_+_19208338 0.03 ENSDART00000110415
SH3-domain binding protein 1
chr4_+_31405646 0.03 ENSDART00000128732
si:rp71-5o12.3
chr10_-_10864331 0.03 ENSDART00000122657
NOTCH regulated ankyrin repeat protein a
chr3_-_11008532 0.03 ENSDART00000165086

chr14_+_23709543 0.03 ENSDART00000136909
glucosamine-6-phosphate deaminase 1
chr1_-_34612613 0.03 ENSDART00000004361
Kruppel-like factor 5a
chr4_+_50410452 0.02 ENSDART00000146006
si:dkey-156k2.8
chr11_-_41130239 0.02 ENSDART00000173268
DnaJ (Hsp40) homolog, subfamily C, member 11b
chr15_-_12011202 0.02 ENSDART00000160427
ENSDART00000168715
si:dkey-202l22.6
chr10_-_10863936 0.02 ENSDART00000180568
NOTCH regulated ankyrin repeat protein a
chr7_+_20966434 0.02 ENSDART00000185570
ephrin-B3b
chr17_-_15201031 0.02 ENSDART00000124426
suppressor of cytokine signaling 4
chr2_+_24203229 0.02 ENSDART00000138088
microtubule associated protein 4 like
chr2_+_47754419 0.02 ENSDART00000188221
muscleblind-like splicing regulator 1
chr12_+_49100365 0.02 ENSDART00000171905

chr10_-_15048781 0.02 ENSDART00000038401
ENSDART00000155674
si:ch211-95j8.2
chr5_-_33825465 0.02 ENSDART00000110645
DAB2 interacting protein b
chr17_-_31044803 0.02 ENSDART00000185941
ENSDART00000152016
echinoderm microtubule associated protein like 1
chr10_+_9346383 0.02 ENSDART00000064975
ENSDART00000141869
RNA binding motif protein 18
chr22_+_24645325 0.02 ENSDART00000159531
lysophosphatidic acid receptor 3
chr13_-_2440622 0.02 ENSDART00000102767
ENSDART00000172616
F-box protein 9
chr22_+_39096911 0.02 ENSDART00000157127
ENSDART00000153841
LIM and cysteine-rich domains 1
chr23_+_7505943 0.01 ENSDART00000135787
HCK proto-oncogene, Src family tyrosine kinase
chr10_-_17179415 0.01 ENSDART00000131751
DEP domain containing 5
chr8_+_36803415 0.01 ENSDART00000111680
IQ motif and Sec7 domain 2b
chr4_-_65747476 0.01 ENSDART00000142421
si:dkey-28k24.2
chr23_-_7826849 0.01 ENSDART00000157612
myelin transcription factor 1b
chr16_-_31675669 0.01 ENSDART00000168848
ENSDART00000158331
complement component 1, r subcomponent
chr20_+_263056 0.01 ENSDART00000132669
tubulin, epsilon 1
chr7_+_26049818 0.01 ENSDART00000173611
si:dkey-6n21.12
chr17_-_8673567 0.01 ENSDART00000192714
ENSDART00000012546
C-terminal binding protein 2a
chr12_-_19279103 0.01 ENSDART00000186669
si:ch211-141o9.10
chr19_+_26424734 0.01 ENSDART00000187402
natriuretic peptide receptor 1a
chr15_-_22139566 0.01 ENSDART00000149017
sodium channel, voltage-gated, type III, beta
chr15_-_47937204 0.01 ENSDART00000154705
si:ch1073-111c8.3
chr9_+_31222026 0.01 ENSDART00000145573
citrate lyase beta like
chr7_+_42206847 0.01 ENSDART00000149250
phosphorylase kinase, beta
chr20_+_51478939 0.01 ENSDART00000149758
toll-like receptor 5a
chr24_+_33589667 0.01 ENSDART00000152097
dynein, axonemal, heavy chain 5 like
chr25_-_1079417 0.00 ENSDART00000163134

chr23_+_4324625 0.00 ENSDART00000146302
ENSDART00000136792
ENSDART00000135027
ENSDART00000179819
serum/glucocorticoid regulated kinase 2a
chr17_-_8673278 0.00 ENSDART00000171850
ENSDART00000017337
ENSDART00000148504
ENSDART00000148808
C-terminal binding protein 2a
chr9_-_24970018 0.00 ENSDART00000026924
dynein, axonemal, heavy chain 7
chr2_-_24407732 0.00 ENSDART00000180612
ENSDART00000153688
ENSDART00000179913
si:dkey-208k22.6
chr15_+_1137337 0.00 ENSDART00000191508
purinergic receptor P2Y13
chr22_-_18241390 0.00 ENSDART00000083879
transmembrane protein 161A
chr5_-_28915130 0.00 ENSDART00000078592
neural proliferation, differentiation and control, 1b
chr16_+_41874001 0.00 ENSDART00000161278
sodium channel, voltage-gated, type I, beta a
chr19_-_23452345 0.00 ENSDART00000136875
Pim proto-oncogene, serine/threonine kinase, related 82

Network of associatons between targets according to the STRING database.

First level regulatory network of nkx2.4a+nkx2.4b

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0035992 tendon formation(GO:0035992)
0.1 0.3 GO:0019557 formate metabolic process(GO:0015942) histidine catabolic process to glutamate and formamide(GO:0019556) histidine catabolic process to glutamate and formate(GO:0019557) formamide metabolic process(GO:0043606)
0.1 0.3 GO:0021530 spinal cord oligodendrocyte cell fate specification(GO:0021530)
0.1 0.3 GO:0001954 positive regulation of cell-matrix adhesion(GO:0001954)
0.0 0.4 GO:0072498 embryonic skeletal joint development(GO:0072498)
0.0 0.4 GO:0042572 retinol metabolic process(GO:0042572)
0.0 0.1 GO:0006041 glucosamine metabolic process(GO:0006041) glucosamine catabolic process(GO:0006043)
0.0 0.1 GO:0002792 negative regulation of peptide secretion(GO:0002792) negative regulation of peptide hormone secretion(GO:0090278)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.2 GO:0021520 spinal cord motor neuron cell fate specification(GO:0021520)
0.0 0.1 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.1 GO:0034650 cortisol metabolic process(GO:0034650)
0.0 0.1 GO:0097105 presynaptic membrane organization(GO:0097090) postsynaptic membrane assembly(GO:0097104) presynaptic membrane assembly(GO:0097105)
0.0 0.3 GO:0021508 floor plate formation(GO:0021508) floor plate morphogenesis(GO:0033505)
0.0 0.1 GO:0090243 fibroblast growth factor receptor signaling pathway involved in somitogenesis(GO:0090243)
0.0 0.1 GO:0030195 negative regulation of blood coagulation(GO:0030195) negative regulation of hemostasis(GO:1900047)
0.0 0.1 GO:0002283 neutrophil activation involved in immune response(GO:0002283)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0047173 phosphatidylcholine-retinol O-acyltransferase activity(GO:0047173)
0.1 0.3 GO:0008401 retinoic acid 4-hydroxylase activity(GO:0008401)
0.1 0.3 GO:0016841 folic acid binding(GO:0005542) ammonia-lyase activity(GO:0016841)
0.0 0.1 GO:0004342 glucosamine-6-phosphate deaminase activity(GO:0004342)
0.0 0.1 GO:0031841 neuropeptide Y receptor binding(GO:0031841) type 2 neuropeptide Y receptor binding(GO:0031843)
0.0 0.2 GO:0001641 group II metabotropic glutamate receptor activity(GO:0001641)
0.0 0.1 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.2 GO:0005007 fibroblast growth factor-activated receptor activity(GO:0005007)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 PID INTEGRIN2 PATHWAY Beta2 integrin cell surface interactions
0.0 0.1 ST PAC1 RECEPTOR PATHWAY PAC1 Receptor Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME SIGNALING BY FGFR3 MUTANTS Genes involved in Signaling by FGFR3 mutants
0.0 0.0 REACTOME FGFR1 LIGAND BINDING AND ACTIVATION Genes involved in FGFR1 ligand binding and activation
0.0 0.3 REACTOME AMYLOIDS Genes involved in Amyloids
0.0 0.3 REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE Genes involved in Cytochrome P450 - arranged by substrate type