PRJNA195909:zebrafish embryo and larva development
Gene Symbol | Gene ID | Gene Info |
---|---|---|
phf21ab
|
ENSDARG00000021378 | PHD finger protein 21Ab |
rfx5
|
ENSDARG00000063258 | regulatory factor X, 5 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
rfx5 | dr11_v1_chr19_-_7495006_7495006 | 0.96 | 2.7e-05 | Click! |
phf21ab | dr11_v1_chr25_-_7759453_7759525 | -0.46 | 2.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr21_-_45920 | 1.20 |
ENSDART00000040422
|
bhmt
|
betaine-homocysteine methyltransferase |
chr10_-_22797959 | 0.93 |
ENSDART00000183269
|
pcolcea
|
procollagen C-endopeptidase enhancer a |
chr2_-_42958619 | 0.66 |
ENSDART00000144317
|
oc90
|
otoconin 90 |
chr5_-_54300725 | 0.57 |
ENSDART00000163048
|
slc25a35
|
solute carrier family 25, member 35 |
chr7_-_26924903 | 0.57 |
ENSDART00000124363
|
alx4a
|
ALX homeobox 4a |
chr10_-_43294933 | 0.56 |
ENSDART00000062631
|
hapln1b
|
hyaluronan and proteoglycan link protein 1b |
chr19_+_43297546 | 0.52 |
ENSDART00000168002
|
laptm5
|
lysosomal protein transmembrane 5 |
chr16_-_13516745 | 0.52 |
ENSDART00000145410
|
si:dkeyp-69b9.3
|
si:dkeyp-69b9.3 |
chr20_-_29787192 | 0.51 |
ENSDART00000125348
ENSDART00000048759 |
id2b
|
inhibitor of DNA binding 2b |
chr16_+_40301056 | 0.50 |
ENSDART00000058578
|
rspo3
|
R-spondin 3 |
chr14_+_6954579 | 0.50 |
ENSDART00000060998
|
nme5
|
NME/NM23 family member 5 |
chr23_+_45025909 | 0.41 |
ENSDART00000188105
|
hmgb2b
|
high mobility group box 2b |
chr4_-_75678082 | 0.40 |
ENSDART00000180201
|
si:dkey-165o8.1
|
si:dkey-165o8.1 |
chr22_+_34710473 | 0.40 |
ENSDART00000155906
|
hoga1
|
4-hydroxy-2-oxoglutarate aldolase 1 |
chr10_-_37072776 | 0.39 |
ENSDART00000110835
|
myo18aa
|
myosin XVIIIAa |
chr23_+_45538932 | 0.38 |
ENSDART00000135602
|
si:ch73-290k24.6
|
si:ch73-290k24.6 |
chr23_-_45539306 | 0.37 |
ENSDART00000161913
|
CU681841.1
|
|
chr1_-_23274393 | 0.36 |
ENSDART00000147800
ENSDART00000130277 ENSDART00000054340 ENSDART00000054338 |
rpl9
|
ribosomal protein L9 |
chr8_+_36288261 | 0.35 |
ENSDART00000191281
|
CU929676.1
|
|
chr8_-_36412936 | 0.35 |
ENSDART00000159276
|
si:zfos-2070c2.3
|
si:zfos-2070c2.3 |
chr8_-_32878228 | 0.31 |
ENSDART00000110897
|
si:dkey-56i24.1
|
si:dkey-56i24.1 |
chr22_+_34710036 | 0.30 |
ENSDART00000025820
|
hoga1
|
4-hydroxy-2-oxoglutarate aldolase 1 |
chr18_+_8339596 | 0.30 |
ENSDART00000183323
ENSDART00000185397 |
BX276107.1
|
|
chr3_-_29941357 | 0.29 |
ENSDART00000147732
ENSDART00000137973 ENSDART00000103523 |
grna
|
granulin a |
chr7_-_26049282 | 0.28 |
ENSDART00000136389
ENSDART00000101124 |
rnaseka
|
ribonuclease, RNase K a |
chr9_-_41077934 | 0.27 |
ENSDART00000100342
|
ankar
|
ankyrin and armadillo repeat containing |
chr1_-_7570181 | 0.27 |
ENSDART00000103588
|
mxa
|
myxovirus (influenza) resistance A |
chr21_-_17290941 | 0.26 |
ENSDART00000147993
|
gfi1b
|
growth factor independent 1B transcription repressor |
chr13_-_16066997 | 0.25 |
ENSDART00000184790
|
SPATA48
|
spermatogenesis associated 48 |
chr4_-_330748 | 0.25 |
ENSDART00000067488
|
mrps10
|
mitochondrial ribosomal protein S10 |
chr15_-_17619306 | 0.25 |
ENSDART00000184011
|
adamts15b
|
ADAM metallopeptidase with thrombospondin type 1 motif, 15b |
chr18_+_49225552 | 0.25 |
ENSDART00000135026
|
si:ch211-136a13.1
|
si:ch211-136a13.1 |
chr23_+_21964325 | 0.25 |
ENSDART00000140208
ENSDART00000135690 |
lactbl1a
|
lactamase, beta-like 1a |
chr21_+_40239192 | 0.24 |
ENSDART00000135857
|
or115-9
|
odorant receptor, family F, subfamily 115, member 9 |
chr25_+_27873836 | 0.22 |
ENSDART00000163801
|
iqub
|
IQ motif and ubiquitin domain containing |
chr18_+_8340886 | 0.21 |
ENSDART00000081132
|
cpt1b
|
carnitine palmitoyltransferase 1B (muscle) |
chr7_+_26049818 | 0.21 |
ENSDART00000173611
|
si:dkey-6n21.12
|
si:dkey-6n21.12 |
chr19_+_27589201 | 0.21 |
ENSDART00000182060
|
si:dkeyp-46h3.1
|
si:dkeyp-46h3.1 |
chr15_+_24388782 | 0.21 |
ENSDART00000191661
ENSDART00000179995 ENSDART00000111226 |
sez6b
|
seizure related 6 homolog b |
chr4_-_76370630 | 0.20 |
ENSDART00000168831
ENSDART00000174313 |
si:ch73-158p21.3
|
si:ch73-158p21.3 |
chr20_+_3277620 | 0.19 |
ENSDART00000067397
ENSDART00000135194 |
ndufaf7
|
NADH dehydrogenase (ubiquinone) complex I, assembly factor 7 |
chr7_-_56606752 | 0.18 |
ENSDART00000138714
|
sult5a1
|
sulfotransferase family 5A, member 1 |
chr25_+_27873671 | 0.17 |
ENSDART00000088817
|
iqub
|
IQ motif and ubiquitin domain containing |
chr13_+_233482 | 0.16 |
ENSDART00000102511
|
cfap36
|
cilia and flagella associated protein 36 |
chr19_-_7110617 | 0.15 |
ENSDART00000104838
|
psmb8a
|
proteasome subunit beta 8A |
chr18_+_49411417 | 0.14 |
ENSDART00000028944
|
LRFN3
|
zmp:0000001073 |
chr20_+_39416729 | 0.14 |
ENSDART00000099993
ENSDART00000144133 |
pimr128
|
Pim proto-oncogene, serine/threonine kinase, related 128 |
chr6_-_40352215 | 0.14 |
ENSDART00000103992
|
ttll3
|
tubulin tyrosine ligase-like family, member 3 |
chr11_-_24458786 | 0.13 |
ENSDART00000089713
|
mxra8a
|
matrix-remodelling associated 8a |
chr8_-_51635930 | 0.13 |
ENSDART00000015833
|
npy8br
|
neuropeptide Y receptor Y8b |
chr18_-_21640389 | 0.12 |
ENSDART00000100857
|
slc38a8a
|
solute carrier family 38, member 8a |
chr4_-_43613424 | 0.11 |
ENSDART00000171524
|
si:dkey-16p6.4
|
si:dkey-16p6.4 |
chr4_-_36033377 | 0.11 |
ENSDART00000164348
ENSDART00000187058 |
zgc:174180
|
zgc:174180 |
chr8_+_50727220 | 0.11 |
ENSDART00000127062
|
egr3
|
early growth response 3 |
chr17_-_45040813 | 0.11 |
ENSDART00000075514
|
entpd5a
|
ectonucleoside triphosphate diphosphohydrolase 5a |
chr14_-_16476863 | 0.11 |
ENSDART00000089021
|
canx
|
calnexin |
chr4_+_68939595 | 0.11 |
ENSDART00000168331
ENSDART00000193212 |
si:dkey-264f17.2
|
si:dkey-264f17.2 |
chr18_-_46063773 | 0.10 |
ENSDART00000078561
|
si:ch73-262h23.4
|
si:ch73-262h23.4 |
chr4_+_76440462 | 0.10 |
ENSDART00000174138
|
si:dkey-16p6.1
|
si:dkey-16p6.1 |
chr4_+_30788743 | 0.10 |
ENSDART00000184557
|
si:dkey-178j11.5
|
si:dkey-178j11.5 |
chr2_-_37862380 | 0.10 |
ENSDART00000186005
|
si:ch211-284o19.8
|
si:ch211-284o19.8 |
chr4_-_49982134 | 0.10 |
ENSDART00000186050
|
si:dkey-156k2.4
|
si:dkey-156k2.4 |
chr21_-_32097908 | 0.09 |
ENSDART00000147387
|
si:ch211-160j14.3
|
si:ch211-160j14.3 |
chr10_-_8434816 | 0.09 |
ENSDART00000108643
|
tctn1
|
tectonic family member 1 |
chr11_+_1805421 | 0.09 |
ENSDART00000173143
|
lrp1aa
|
low density lipoprotein receptor-related protein 1Aa |
chr7_+_66822229 | 0.09 |
ENSDART00000112109
|
lyve1a
|
lymphatic vessel endothelial hyaluronic receptor 1a |
chr25_+_22719852 | 0.08 |
ENSDART00000088422
|
abcc8
|
ATP-binding cassette, sub-family C (CFTR/MRP), member 8 |
chr1_-_494280 | 0.08 |
ENSDART00000144406
|
ercc5
|
excision repair cross-complementation group 5 |
chr8_-_36370552 | 0.06 |
ENSDART00000097932
ENSDART00000148323 |
si:busm1-104n07.3
|
si:busm1-104n07.3 |
chr5_+_38662125 | 0.06 |
ENSDART00000136949
|
si:dkey-58f10.13
|
si:dkey-58f10.13 |
chr20_+_39394308 | 0.05 |
ENSDART00000142554
|
pimr136
|
Pim proto-oncogene, serine/threonine kinase, related 136 |
chr6_+_26309968 | 0.04 |
ENSDART00000153805
|
dzip1l
|
DAZ interacting zinc finger protein 1-like |
chr23_+_41831224 | 0.04 |
ENSDART00000171885
|
scp2b
|
sterol carrier protein 2b |
chr20_+_39373480 | 0.03 |
ENSDART00000136714
|
pimr131
|
Pim proto-oncogene, serine/threonine kinase, related 131 |
chr2_-_49978227 | 0.02 |
ENSDART00000142835
|
hecw1b
|
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1b |
chr18_-_8579907 | 0.02 |
ENSDART00000147284
|
FRMD4A
|
si:ch211-220f12.1 |
chr20_+_43396318 | 0.02 |
ENSDART00000060910
|
pimr138
|
Pim proto-oncogene, serine/threonine kinase, related 138 |
chr4_+_7822773 | 0.02 |
ENSDART00000171391
|
si:ch1073-67j19.2
|
si:ch1073-67j19.2 |
chr10_+_36092564 | 0.02 |
ENSDART00000086490
|
smyd4
|
SET and MYND domain containing 4 |
chr8_+_36142734 | 0.02 |
ENSDART00000159361
ENSDART00000161194 |
mhc2b
|
major histocompatibility complex class II integral membrane beta chain gene |
chr5_+_58397646 | 0.01 |
ENSDART00000180759
|
HEPACAM
|
hepatic and glial cell adhesion molecule |
chr4_-_36032177 | 0.01 |
ENSDART00000170143
|
zgc:174180
|
zgc:174180 |
chr20_+_9211237 | 0.01 |
ENSDART00000139527
|
si:ch211-59d15.4
|
si:ch211-59d15.4 |
chr21_+_40268527 | 0.00 |
ENSDART00000174350
|
or115-7
|
odorant receptor, family F, subfamily 115, member 7 |
chr1_+_24366110 | 0.00 |
ENSDART00000139913
|
pimr178
|
Pim proto-oncogene, serine/threonine kinase, related 178 |
chr3_-_7912661 | 0.00 |
ENSDART00000161400
|
trim35-21
|
tripartite motif containing 35-21 |
chr7_-_3011514 | 0.00 |
ENSDART00000169589
|
zgc:171695
|
zgc:171695 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.5 | GO:1902175 | regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902175) negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902176) |
0.1 | 0.5 | GO:0060829 | negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060829) |
0.1 | 0.5 | GO:0051145 | smooth muscle cell differentiation(GO:0051145) |
0.1 | 0.7 | GO:0046487 | glyoxylate metabolic process(GO:0046487) |
0.1 | 1.2 | GO:0009086 | methionine biosynthetic process(GO:0009086) |
0.0 | 0.7 | GO:1903963 | icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) arachidonate transport(GO:1903963) |
0.0 | 0.3 | GO:0071340 | skeletal muscle acetylcholine-gated channel clustering(GO:0071340) |
0.0 | 0.2 | GO:0035332 | positive regulation of hippo signaling(GO:0035332) |
0.0 | 0.3 | GO:0046685 | response to arsenic-containing substance(GO:0046685) |
0.0 | 0.1 | GO:0006295 | nucleotide-excision repair, DNA incision, 3'-to lesion(GO:0006295) |
0.0 | 0.2 | GO:0009437 | carnitine metabolic process(GO:0009437) |
0.0 | 0.5 | GO:0032922 | circadian regulation of gene expression(GO:0032922) |
0.0 | 0.1 | GO:0072506 | phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0098844 | postsynaptic endocytic zone membrane(GO:0098844) |
0.0 | 0.3 | GO:0000314 | organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | GO:0008172 | S-methyltransferase activity(GO:0008172) |
0.1 | 0.7 | GO:0016833 | oxo-acid-lyase activity(GO:0016833) |
0.1 | 0.2 | GO:0035243 | protein-arginine omega-N symmetric methyltransferase activity(GO:0035243) |
0.0 | 0.1 | GO:0070735 | protein-glycine ligase activity(GO:0070735) tubulin-glycine ligase activity(GO:0070738) |
0.0 | 0.2 | GO:0016416 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
0.0 | 0.7 | GO:0004623 | phospholipase A2 activity(GO:0004623) |
0.0 | 0.4 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.0 | 0.5 | GO:0004550 | nucleoside diphosphate kinase activity(GO:0004550) |
0.0 | 0.6 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.0 | 0.1 | GO:0008281 | sulfonylurea receptor activity(GO:0008281) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.0 | 0.2 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |