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PRJNA195909:zebrafish embryo and larva development

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Results for vax2

Z-value: 0.27

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Transcription factors associated with vax2

Gene Symbol Gene ID Gene Info
vax2
ENSDARG00000058702 ventral anterior homeobox 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
vax2dr11_v1_chr7_-_8881514_88815140.442.4e-01Click!

Activity profile of vax2 motif

Sorted Z-values of vax2 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr10_-_34002185 0.73 ENSDART00000046599
zar1l
zygote arrest 1-like
chr11_-_44801968 0.59 ENSDART00000161846
map1lc3c
microtubule-associated protein 1 light chain 3 gamma
chr18_-_40708537 0.44 ENSDART00000077577
si:ch211-132b12.8
si:ch211-132b12.8
chr12_-_33357655 0.42 ENSDART00000066233
ENSDART00000148165
slc16a3
solute carrier family 16 (monocarboxylate transporter), member 3
chr22_+_23359369 0.39 ENSDART00000170886
dennd1b
DENN/MADD domain containing 1B
chr2_+_6253246 0.36 ENSDART00000058256
ENSDART00000076700
zp3b
zona pellucida glycoprotein 3b
chr16_-_42056137 0.36 ENSDART00000102798
zp3d.2
zona pellucida glycoprotein 3d tandem duplicate 2
chr11_-_6452444 0.36 ENSDART00000137879
ENSDART00000134957
ENSDART00000004483
larp6b
La ribonucleoprotein domain family, member 6b
chr1_-_55248496 0.33 ENSDART00000098615
nanos3
nanos homolog 3
chr11_+_31864921 0.33 ENSDART00000180252
diaph3
diaphanous-related formin 3
chr5_+_37903790 0.29 ENSDART00000162470
tmprss4b
transmembrane protease, serine 4b
chr5_-_16472719 0.28 ENSDART00000162071
piwil2
piwi-like RNA-mediated gene silencing 2
chr13_-_35808904 0.28 ENSDART00000171667
map3k4
mitogen-activated protein kinase kinase kinase 4
chr2_-_26596794 0.27 ENSDART00000134685
ENSDART00000056787
zgc:113691
zgc:113691
chr13_+_40501455 0.25 ENSDART00000114985
hpse2
heparanase 2
chr1_-_6085750 0.24 ENSDART00000138891
si:ch1073-345a8.1
si:ch1073-345a8.1
chr6_-_7726849 0.24 ENSDART00000151511
slc25a38b
solute carrier family 25, member 38b
chr19_+_2631565 0.24 ENSDART00000171487
fam126a
family with sequence similarity 126, member A
chr23_+_42272588 0.22 ENSDART00000164907
CABZ01065131.1

chr11_-_3533356 0.21 ENSDART00000161972
ddx19
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast)
chr20_-_37813863 0.21 ENSDART00000147529
batf3
basic leucine zipper transcription factor, ATF-like 3
chr14_-_14659023 0.20 ENSDART00000170355
ENSDART00000159888
ENSDART00000172241
nsdhl
NAD(P) dependent steroid dehydrogenase-like
chr3_-_26787430 0.19 ENSDART00000087047
rab40c
RAB40c, member RAS oncogene family
chr11_-_39118882 0.18 ENSDART00000113185
ENSDART00000156526
ap5b1
adaptor-related protein complex 5, beta 1 subunit
chr23_-_25779995 0.17 ENSDART00000110670
si:dkey-21c19.3
si:dkey-21c19.3
chr13_+_38817871 0.17 ENSDART00000187708
col19a1
collagen, type XIX, alpha 1
chr6_-_12275836 0.17 ENSDART00000189980
pkp4
plakophilin 4
chr10_+_40284003 0.16 ENSDART00000062795
ENSDART00000193825
ENSDART00000113582
git2b
G protein-coupled receptor kinase interacting ArfGAP 2b
chr24_-_29586082 0.16 ENSDART00000136763
vav3a
vav 3 guanine nucleotide exchange factor a
chr21_+_31150438 0.16 ENSDART00000065366
st6gal1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr8_+_2543525 0.16 ENSDART00000129569
ENSDART00000128227
gle1
GLE1 RNA export mediator homolog (yeast)
chr23_-_33679579 0.15 ENSDART00000188674
tfcp2
transcription factor CP2
chr25_-_37248795 0.15 ENSDART00000087247
ENSDART00000154045
glg1a
golgi glycoprotein 1a
chr15_+_21262917 0.15 ENSDART00000101000
gkup
glucuronokinase with putative uridyl pyrophosphorylase
chr3_-_20040636 0.15 ENSDART00000104118
atxn7l3
ataxin 7-like 3
chr13_-_38039871 0.15 ENSDART00000140645
CR456624.1

chr7_-_12464412 0.14 ENSDART00000178723
adamtsl3
ADAMTS-like 3
chr20_-_28800999 0.14 ENSDART00000049462
rab15
RAB15, member RAS oncogene family
chr10_-_2788668 0.13 ENSDART00000131749
ENSDART00000124356
ENSDART00000085031
ash2l
ash2 (absent, small, or homeotic)-like (Drosophila)
chr23_-_35790235 0.13 ENSDART00000142369
ENSDART00000141141
ENSDART00000011004
mfsd5
major facilitator superfamily domain containing 5
chr13_-_36798204 0.13 ENSDART00000012357
sav1
salvador family WW domain containing protein 1
chr23_+_28809002 0.13 ENSDART00000134121
ENSDART00000183661
pex14
peroxisomal biogenesis factor 14
chr8_+_24296639 0.13 ENSDART00000172002
ZNF335
si:ch211-269m15.3
chr23_+_4709607 0.13 ENSDART00000166503
ENSDART00000158752
ENSDART00000163860
ENSDART00000172739
raf1a
raf1a
Raf-1 proto-oncogene, serine/threonine kinase a
Raf-1 proto-oncogene, serine/threonine kinase a
chr21_+_31150773 0.13 ENSDART00000126205
st6gal1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr8_-_53044300 0.12 ENSDART00000191653
nr6a1a
nuclear receptor subfamily 6, group A, member 1a
chr15_-_11683529 0.12 ENSDART00000161445
fkrp
fukutin related protein
chr6_-_55399214 0.12 ENSDART00000168367
ctsa
cathepsin A
chr12_+_47698356 0.12 ENSDART00000112010
lzts2b
leucine zipper, putative tumor suppressor 2b
chr9_-_43538328 0.12 ENSDART00000140526
znf385b
zinc finger protein 385B
chr20_-_40754794 0.11 ENSDART00000187251
cx32.3
connexin 32.3
chr7_-_31922432 0.11 ENSDART00000188398
lin7c
lin-7 homolog C (C. elegans)
chr10_-_11261565 0.11 ENSDART00000146727
ptbp3
polypyrimidine tract binding protein 3
chr9_-_34937025 0.11 ENSDART00000137888
cdc16
cell division cycle 16 homolog (S. cerevisiae)
chr2_+_10007113 0.11 ENSDART00000155213
slc35a3b
solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3b
chr1_-_45616470 0.11 ENSDART00000150165
atf7ip
activating transcription factor 7 interacting protein
chr13_-_8692860 0.11 ENSDART00000058107
mcfd2
multiple coagulation factor deficiency 2
chr5_-_66397688 0.11 ENSDART00000161483
hip1rb
huntingtin interacting protein 1 related b
chr20_+_29209767 0.11 ENSDART00000141252
katnbl1
katanin p80 subunit B-like 1
chr2_+_105748 0.11 ENSDART00000169601
CABZ01098670.1

chr4_+_77943184 0.10 ENSDART00000159094
pacsin2
protein kinase C and casein kinase substrate in neurons 2
chr10_-_105100 0.10 ENSDART00000145716
ttc3
tetratricopeptide repeat domain 3
chr7_-_41746427 0.10 ENSDART00000174232
arl8
ADP-ribosylation factor-like 8
chr24_-_11446156 0.10 ENSDART00000143921
ENSDART00000066778
acad11
acyl-CoA dehydrogenase family, member 11
chr1_+_26480890 0.10 ENSDART00000164430
uso1
USO1 vesicle transport factor
chr21_-_31013817 0.10 ENSDART00000065504
ncbp3
nuclear cap binding subunit 3
chr21_+_27370671 0.10 ENSDART00000009234
ENSDART00000142071
rbm14a
RNA binding motif protein 14a
chr7_-_9873652 0.10 ENSDART00000006343
asb7
ankyrin repeat and SOCS box containing 7
chr15_-_43284021 0.10 ENSDART00000041677
serpine2
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
chr23_-_2901167 0.09 ENSDART00000165955
ENSDART00000190616
zhx3
zinc fingers and homeoboxes 3
chr16_+_28994709 0.09 ENSDART00000088023
gon4l
gon-4-like (C. elegans)
chr4_-_2975461 0.09 ENSDART00000150794
plekha5
pleckstrin homology domain containing, family A member 5
chr4_-_1801519 0.08 ENSDART00000188604
ENSDART00000135749
nudt4b
nudix (nucleoside diphosphate linked moiety X)-type motif 4b
chr18_-_41160975 0.08 ENSDART00000187517
CABZ01005876.1

chr10_-_11261386 0.08 ENSDART00000189946
ptbp3
polypyrimidine tract binding protein 3
chr9_-_11676491 0.08 ENSDART00000022358
zc3h15
zinc finger CCCH-type containing 15
chr24_+_19415124 0.08 ENSDART00000186931
sulf1
sulfatase 1
chr11_-_2478374 0.07 ENSDART00000173205
si:ch73-267c23.10
si:ch73-267c23.10
chr17_+_8799661 0.07 ENSDART00000105326
tonsl
tonsoku-like, DNA repair protein
chr21_-_13972745 0.07 ENSDART00000143874
akna
AT-hook transcription factor
chrM_+_12897 0.07 ENSDART00000093622
mt-nd5
NADH dehydrogenase 5, mitochondrial
chr20_+_29209926 0.07 ENSDART00000152949
ENSDART00000153016
katnbl1
katanin p80 subunit B-like 1
chr21_-_39177564 0.07 ENSDART00000065143
unc119b
unc-119 homolog b (C. elegans)
chr7_-_17297156 0.07 ENSDART00000161336
nitr11a
novel immune-type receptor 11a
chr16_+_23799622 0.07 ENSDART00000046922
rab13
RAB13, member RAS oncogene family
chr23_-_36446307 0.07 ENSDART00000136623
zgc:174906
zgc:174906
chr20_+_29209615 0.07 ENSDART00000062350
katnbl1
katanin p80 subunit B-like 1
chr3_-_16719244 0.06 ENSDART00000055859
pold1
polymerase (DNA directed), delta 1, catalytic subunit
chr13_-_8692432 0.06 ENSDART00000058106
mcfd2
multiple coagulation factor deficiency 2
chr10_-_35321625 0.06 ENSDART00000131268
rhbdd2
rhomboid domain containing 2
chr7_+_9873750 0.06 ENSDART00000173348
ENSDART00000172813
lins1
lines homolog 1
chr19_+_5480327 0.06 ENSDART00000148794
jupb
junction plakoglobin b
chr25_-_13490744 0.05 ENSDART00000056721
ldhd
lactate dehydrogenase D
chr25_-_7705487 0.05 ENSDART00000128099
prdm11
PR domain containing 11
chr17_+_15983557 0.05 ENSDART00000190806
clmn
calmin
chr8_-_37249813 0.04 ENSDART00000098634
ENSDART00000140233
ENSDART00000061328
rbm39b
RNA binding motif protein 39b
chr1_+_49668423 0.04 ENSDART00000150880
tsga10
testis specific, 10
chr14_+_29941445 0.04 ENSDART00000181761
fam149a
family with sequence similarity 149 member A
chr20_-_43663494 0.04 ENSDART00000144564
BX470188.1

chr9_-_9415000 0.04 ENSDART00000146210
si:ch211-214p13.9
si:ch211-214p13.9
chr16_+_13818743 0.04 ENSDART00000090191
flcn
folliculin
chr14_+_40874608 0.04 ENSDART00000168448
si:ch211-106m9.1
si:ch211-106m9.1
chr17_-_200316 0.04 ENSDART00000190561
CABZ01083778.1

chr15_-_33925851 0.04 ENSDART00000187807
ENSDART00000187780
mag
myelin associated glycoprotein
chr16_-_15387459 0.03 ENSDART00000053754
has2
hyaluronan synthase 2
chr17_+_3379673 0.03 ENSDART00000176354
sntg2
syntrophin, gamma 2
chr17_+_28706946 0.03 ENSDART00000126967
strn3
striatin, calmodulin binding protein 3
chr18_+_50461981 0.03 ENSDART00000158761
CU896640.1

chr11_+_5468629 0.03 ENSDART00000013203
cse1l
CSE1 chromosome segregation 1-like (yeast)
chr8_+_26059677 0.03 ENSDART00000009178
impdh2
IMP (inosine 5'-monophosphate) dehydrogenase 2
chr20_-_7133546 0.03 ENSDART00000160910
si:ch211-121a2.4
si:ch211-121a2.4
chr8_-_37249991 0.03 ENSDART00000189275
ENSDART00000178556
rbm39b
RNA binding motif protein 39b
chr12_+_48803098 0.03 ENSDART00000074768
ppifb
peptidylprolyl isomerase Fb
chr24_+_26134209 0.02 ENSDART00000038824
tmtopsb
teleost multiple tissue opsin b
chr3_+_54744069 0.02 ENSDART00000134958
ENSDART00000114443
si:ch211-74m13.3
si:ch211-74m13.3
chr13_+_646700 0.02 ENSDART00000006892
tp53bp2a
tumor protein p53 binding protein, 2a
chr9_+_35015747 0.02 ENSDART00000140110
gabpa
GA binding protein transcription factor, alpha subunit
chr19_+_3213914 0.02 ENSDART00000193144
zgc:86598
zgc:86598
chr11_+_33312601 0.02 ENSDART00000188024
cntnap5l
contactin associated protein-like 5 like
chr10_+_13000669 0.02 ENSDART00000158919
ENSDART00000172625
lpar1
lysophosphatidic acid receptor 1
chr1_-_15797663 0.01 ENSDART00000177122
SGCZ
sarcoglycan zeta
chr22_+_7738966 0.01 ENSDART00000147073
si:ch73-44m9.5
si:ch73-44m9.5
chr8_+_25034544 0.01 ENSDART00000123300
ngrn
neugrin, neurite outgrowth associated
chr10_+_11261576 0.01 ENSDART00000155333
hsdl2
hydroxysteroid dehydrogenase like 2
chr5_-_68093169 0.01 ENSDART00000051849
slc25a11
solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
chr2_+_53720028 0.01 ENSDART00000170799
ctnnbl1
catenin, beta like 1
chr10_-_22095505 0.01 ENSDART00000140210
ponzr10
plac8 onzin related protein 10
chr4_+_966061 0.01 ENSDART00000122535
rpap3
RNA polymerase II associated protein 3
chr8_-_12264486 0.01 ENSDART00000091612
ENSDART00000135812
dab2ipa
DAB2 interacting protein a
chr15_+_6774994 0.01 ENSDART00000170011
si:ch1073-228b5.2
si:ch1073-228b5.2
chr1_-_17715493 0.01 ENSDART00000133027
si:dkey-256e7.8
si:dkey-256e7.8
chr23_+_30827959 0.01 ENSDART00000033429
npbwr2a
neuropeptides B/W receptor 2a
chr12_-_4532066 0.01 ENSDART00000092687
trpm4b.2
transient receptor potential cation channel, subfamily M, member 4b, transient receptor potential cation channel, subfamily M, member 4b, tandem duplicate 2
chr14_-_8724290 0.01 ENSDART00000161171
pimr56
Pim proto-oncogene, serine/threonine kinase, related 56
chr8_-_25034411 0.00 ENSDART00000135973
nfyal
nuclear transcription factor Y, alpha, like
chr4_-_30422325 0.00 ENSDART00000158444
znf1114
zinc finger protein 1114
chr16_-_32837806 0.00 ENSDART00000003997
MCHR2
si:dkey-165n16.5

Network of associatons between targets according to the STRING database.

First level regulatory network of vax2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0030718 germ-line stem cell population maintenance(GO:0030718)
0.1 0.2 GO:1904983 transmembrane glycine transport from cytosol to mitochondrion(GO:1904983)
0.0 0.7 GO:2000344 binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0 0.2 GO:1902019 regulation of cilium movement involved in cell motility(GO:0060295) regulation of cilium beat frequency involved in ciliary motility(GO:0060296) regulation of cilium-dependent cell motility(GO:1902019)
0.0 0.1 GO:1903292 protein localization to Golgi membrane(GO:1903292)
0.0 0.1 GO:0048211 Golgi vesicle docking(GO:0048211)
0.0 0.1 GO:0060049 regulation of protein glycosylation(GO:0060049)
0.0 0.1 GO:1903361 protein localization to basolateral plasma membrane(GO:1903361)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.1 GO:0006089 lactate metabolic process(GO:0006089)
0.0 0.1 GO:0015990 energy coupled proton transmembrane transport, against electrochemical gradient(GO:0015988) electron transport coupled proton transport(GO:0015990)
0.0 0.3 GO:0006995 cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562)
0.0 0.1 GO:0048210 Golgi vesicle fusion to target membrane(GO:0048210)
0.0 0.1 GO:1901911 diphosphoinositol polyphosphate metabolic process(GO:0071543) diadenosine pentaphosphate metabolic process(GO:1901906) diadenosine pentaphosphate catabolic process(GO:1901907) diadenosine hexaphosphate metabolic process(GO:1901908) diadenosine hexaphosphate catabolic process(GO:1901909) adenosine 5'-(hexahydrogen pentaphosphate) metabolic process(GO:1901910) adenosine 5'-(hexahydrogen pentaphosphate) catabolic process(GO:1901911)
0.0 0.2 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.0 0.1 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.0 0.1 GO:0051013 microtubule severing(GO:0051013)
0.0 0.1 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.0 GO:0030213 renal water homeostasis(GO:0003091) renal water transport(GO:0003097) hyaluronan biosynthetic process(GO:0030213)
0.0 0.1 GO:0002159 desmosome assembly(GO:0002159)
0.0 0.2 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.2 GO:2000369 regulation of clathrin-mediated endocytosis(GO:2000369)
0.0 0.1 GO:0044854 membrane raft assembly(GO:0001765) plasma membrane raft assembly(GO:0044854) plasma membrane raft organization(GO:0044857) caveola assembly(GO:0070836)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:1990923 PET complex(GO:1990923)
0.0 0.1 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 0.1 GO:0097025 MPP7-DLG1-LIN7 complex(GO:0097025)
0.0 0.2 GO:0032593 insulin-responsive compartment(GO:0032593)
0.0 0.1 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 0.3 GO:0043186 P granule(GO:0043186)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.0 GO:0019815 B cell receptor complex(GO:0019815)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.7 GO:0032190 acrosin binding(GO:0032190)
0.0 0.3 GO:0034584 piRNA binding(GO:0034584)
0.0 0.3 GO:0003835 beta-galactoside alpha-2,6-sialyltransferase activity(GO:0003835)
0.0 0.4 GO:0015129 lactate transmembrane transporter activity(GO:0015129)
0.0 0.1 GO:0097016 L27 domain binding(GO:0097016)
0.0 0.1 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.2 GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854)
0.0 0.2 GO:0015187 glycine transmembrane transporter activity(GO:0015187)
0.0 0.1 GO:0034431 endopolyphosphatase activity(GO:0000298) diphosphoinositol-polyphosphate diphosphatase activity(GO:0008486) bis(5'-adenosyl)-hexaphosphatase activity(GO:0034431) bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.1 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.1 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.0 0.2 GO:0016929 SUMO-specific protease activity(GO:0016929)
0.0 0.1 GO:0010314 phosphatidylinositol-5-phosphate binding(GO:0010314)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID P38 MKK3 6PATHWAY p38 MAPK signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.0 0.4 REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS Genes involved in Bile salt and organic anion SLC transporters
0.0 0.2 REACTOME HS GAG DEGRADATION Genes involved in HS-GAG degradation