PRJNA207719: Tissue specific transcriptome profiling
Gene Symbol | Gene ID | Gene Info |
---|---|---|
gbx2
|
ENSDARG00000002933 | gastrulation brain homeobox 2 |
gbx2
|
ENSDARG00000116377 | gastrulation brain homeobox 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
gbx2 | dr11_v1_chr6_+_16031189_16031189 | 0.69 | 2.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_21037840 | 0.26 |
ENSDART00000002393
|
rundc3aa
|
RUN domain containing 3Aa |
chr18_+_26895994 | 0.25 |
ENSDART00000098347
|
ch25hl1.2
|
cholesterol 25-hydroxylase like 1, tandem duplicate 2 |
chr8_+_31821396 | 0.22 |
ENSDART00000077053
|
plcxd3
|
phosphatidylinositol-specific phospholipase C, X domain containing 3 |
chr11_+_24620742 | 0.22 |
ENSDART00000182471
ENSDART00000048365 |
syt6b
|
synaptotagmin VIb |
chr12_-_35386910 | 0.22 |
ENSDART00000153453
|
camk2g1
|
calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1 |
chr10_-_34741738 | 0.21 |
ENSDART00000163072
|
dclk1a
|
doublecortin-like kinase 1a |
chr18_+_17537344 | 0.20 |
ENSDART00000025782
|
nup93
|
nucleoporin 93 |
chr17_+_51499789 | 0.19 |
ENSDART00000187701
|
CABZ01067581.1
|
|
chr5_+_30624183 | 0.18 |
ENSDART00000141444
|
abcg4a
|
ATP-binding cassette, sub-family G (WHITE), member 4a |
chr4_-_5019113 | 0.18 |
ENSDART00000189321
ENSDART00000081990 |
strip2
|
striatin interacting protein 2 |
chr17_-_37214196 | 0.18 |
ENSDART00000128715
|
kif3cb
|
kinesin family member 3Cb |
chr8_+_20140321 | 0.18 |
ENSDART00000012120
|
acsbg2
|
acyl-CoA synthetase bubblegum family member 2 |
chr2_-_36918709 | 0.17 |
ENSDART00000084876
|
zgc:153654
|
zgc:153654 |
chr22_+_24157807 | 0.17 |
ENSDART00000159165
|
b3galt2
|
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 |
chr17_+_24318753 | 0.16 |
ENSDART00000064083
|
otx1
|
orthodenticle homeobox 1 |
chr15_-_10341048 | 0.16 |
ENSDART00000171013
|
tenm4
|
teneurin transmembrane protein 4 |
chr1_+_18811679 | 0.16 |
ENSDART00000078610
|
slc25a51a
|
solute carrier family 25, member 51a |
chr21_-_43606502 | 0.16 |
ENSDART00000151030
|
si:ch73-362m14.4
|
si:ch73-362m14.4 |
chr17_+_10593398 | 0.15 |
ENSDART00000168897
ENSDART00000193989 ENSDART00000191664 ENSDART00000167188 |
mapkbp1
|
mitogen-activated protein kinase binding protein 1 |
chr15_-_11956981 | 0.15 |
ENSDART00000164163
|
si:dkey-202l22.3
|
si:dkey-202l22.3 |
chr5_+_57773222 | 0.14 |
ENSDART00000135344
|
ppp2r1ba
|
protein phosphatase 2, regulatory subunit A, beta a |
chr23_-_333457 | 0.14 |
ENSDART00000114486
|
uhrf1bp1
|
UHRF1 binding protein 1 |
chr18_+_8833251 | 0.14 |
ENSDART00000143519
|
impdh1a
|
IMP (inosine 5'-monophosphate) dehydrogenase 1a |
chr18_+_7639401 | 0.14 |
ENSDART00000092416
|
rabl2
|
RAB, member of RAS oncogene family-like 2 |
chr23_+_4253957 | 0.13 |
ENSDART00000008761
|
arl6ip5b
|
ADP-ribosylation factor-like 6 interacting protein 5b |
chr10_+_43797130 | 0.13 |
ENSDART00000027242
|
nr2f1b
|
nuclear receptor subfamily 2, group F, member 1b |
chr7_-_33684632 | 0.13 |
ENSDART00000130553
|
tle3b
|
transducin-like enhancer of split 3b |
chr4_-_5018705 | 0.13 |
ENSDART00000154025
|
strip2
|
striatin interacting protein 2 |
chr4_+_11384891 | 0.13 |
ENSDART00000092381
ENSDART00000186577 ENSDART00000191054 ENSDART00000191584 |
pcloa
|
piccolo presynaptic cytomatrix protein a |
chr5_-_69923241 | 0.13 |
ENSDART00000187389
|
fktn
|
fukutin |
chr24_-_25364775 | 0.13 |
ENSDART00000151915
|
ptchd1
|
patched domain containing 1 |
chr16_+_5678071 | 0.12 |
ENSDART00000011166
ENSDART00000134198 ENSDART00000131575 |
zgc:158689
|
zgc:158689 |
chr20_-_18382708 | 0.12 |
ENSDART00000170864
ENSDART00000166762 ENSDART00000191333 |
vipas39
|
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog |
chr22_-_619711 | 0.12 |
ENSDART00000192778
|
srsf3b
|
serine/arginine-rich splicing factor 3b |
chr11_-_422484 | 0.12 |
ENSDART00000122253
|
znf831
|
zinc finger protein 831 |
chr15_-_45110011 | 0.11 |
ENSDART00000182047
ENSDART00000188662 |
CABZ01072607.1
|
|
chr1_+_40023640 | 0.11 |
ENSDART00000101623
|
lgi2b
|
leucine-rich repeat LGI family, member 2b |
chr8_+_18010568 | 0.11 |
ENSDART00000121984
|
ssbp3b
|
single stranded DNA binding protein 3b |
chr8_+_23105117 | 0.11 |
ENSDART00000025171
|
ythdf1
|
YTH N(6)-methyladenosine RNA binding protein 1 |
chr2_+_35240485 | 0.10 |
ENSDART00000179804
|
tnr
|
tenascin R (restrictin, janusin) |
chr1_-_18803919 | 0.10 |
ENSDART00000020970
|
pgm2
|
phosphoglucomutase 2 |
chr18_+_31057143 | 0.10 |
ENSDART00000164585
|
mvda
|
mevalonate (diphospho) decarboxylase a |
chr1_-_8000428 | 0.10 |
ENSDART00000133098
|
si:dkey-79f11.5
|
si:dkey-79f11.5 |
chr13_+_733027 | 0.10 |
ENSDART00000149547
|
nrxn1b
|
neurexin 1b |
chr1_-_22512063 | 0.10 |
ENSDART00000031546
ENSDART00000190987 |
chrna6
|
cholinergic receptor, nicotinic, alpha 6 |
chr2_-_23004286 | 0.10 |
ENSDART00000134664
ENSDART00000110373 ENSDART00000185833 ENSDART00000187235 |
znf414
mllt1b
|
zinc finger protein 414 MLLT1, super elongation complex subunit b |
chr10_-_14929630 | 0.10 |
ENSDART00000121892
ENSDART00000044756 ENSDART00000128579 ENSDART00000147653 |
smad2
|
SMAD family member 2 |
chr14_-_14643190 | 0.09 |
ENSDART00000167119
|
znf185
|
zinc finger protein 185 with LIM domain |
chr3_-_61336841 | 0.09 |
ENSDART00000155414
|
tecpr1b
|
tectonin beta-propeller repeat containing 1b |
chr10_-_32920690 | 0.09 |
ENSDART00000136245
|
cux1a
|
cut-like homeobox 1a |
chr18_-_15932704 | 0.08 |
ENSDART00000127769
|
plekhg7
|
pleckstrin homology domain containing, family G (with RhoGef domain) member 7 |
chr14_+_25816874 | 0.08 |
ENSDART00000005499
|
glra1
|
glycine receptor, alpha 1 |
chr16_-_7379328 | 0.08 |
ENSDART00000060447
|
med18
|
mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) |
chr12_+_5977777 | 0.08 |
ENSDART00000152302
|
si:ch211-131k2.2
|
si:ch211-131k2.2 |
chr9_-_9671244 | 0.08 |
ENSDART00000018228
|
gsk3b
|
glycogen synthase kinase 3 beta |
chr3_+_28581397 | 0.08 |
ENSDART00000150893
|
sept12
|
septin 12 |
chr7_-_58098814 | 0.08 |
ENSDART00000147287
ENSDART00000043984 |
ank2b
|
ankyrin 2b, neuronal |
chr8_+_23826985 | 0.07 |
ENSDART00000187430
|
mapk14a
|
mitogen-activated protein kinase 14a |
chr23_+_42254960 | 0.07 |
ENSDART00000102980
|
zcchc11
|
zinc finger, CCHC domain containing 11 |
chr18_-_16937008 | 0.07 |
ENSDART00000100117
ENSDART00000022640 ENSDART00000136541 |
znf143b
|
zinc finger protein 143b |
chr14_+_35464994 | 0.07 |
ENSDART00000115307
|
si:ch211-203d1.3
|
si:ch211-203d1.3 |
chr7_+_59677273 | 0.07 |
ENSDART00000039535
ENSDART00000132044 |
trmt44
|
tRNA methyltransferase 44 homolog |
chr17_+_1496107 | 0.07 |
ENSDART00000187804
|
LO018430.1
|
|
chr11_-_2632747 | 0.07 |
ENSDART00000008133
|
si:ch211-160o17.2
|
si:ch211-160o17.2 |
chr11_-_12158412 | 0.07 |
ENSDART00000147670
|
npepps
|
aminopeptidase puromycin sensitive |
chr19_-_20430892 | 0.07 |
ENSDART00000111409
|
tbc1d5
|
TBC1 domain family, member 5 |
chr18_+_16750080 | 0.07 |
ENSDART00000136320
|
rnf141
|
ring finger protein 141 |
chr20_+_18741089 | 0.06 |
ENSDART00000183218
|
fam167ab
|
family with sequence similarity 167, member Ab |
chr3_-_26921475 | 0.06 |
ENSDART00000130281
|
ciita
|
class II, major histocompatibility complex, transactivator |
chr8_+_21229718 | 0.05 |
ENSDART00000100222
|
cry1ba
|
cryptochrome circadian clock 1ba |
chr15_-_16177603 | 0.05 |
ENSDART00000156352
|
si:ch211-259g3.4
|
si:ch211-259g3.4 |
chr20_-_7069612 | 0.05 |
ENSDART00000040793
|
sirt5
|
sirtuin 5 |
chr20_-_7128612 | 0.05 |
ENSDART00000146755
ENSDART00000036871 |
si:ch211-121a2.4
|
si:ch211-121a2.4 |
chr14_-_3180841 | 0.05 |
ENSDART00000184370
ENSDART00000183810 |
csf1ra
|
colony stimulating factor 1 receptor, a |
chr24_+_35881124 | 0.05 |
ENSDART00000143015
|
klhl14
|
kelch-like family member 14 |
chr7_+_53755054 | 0.04 |
ENSDART00000181629
|
neo1a
|
neogenin 1a |
chr11_+_6819050 | 0.04 |
ENSDART00000104289
|
rab3ab
|
RAB3A, member RAS oncogene family, b |
chr22_-_36530902 | 0.04 |
ENSDART00000056188
|
polr2h
|
info polymerase (RNA) II (DNA directed) polypeptide H |
chr13_-_33654931 | 0.04 |
ENSDART00000020350
|
snx5
|
sorting nexin 5 |
chr22_+_2417105 | 0.04 |
ENSDART00000106415
|
zgc:113220
|
zgc:113220 |
chr19_+_21820144 | 0.04 |
ENSDART00000181996
|
CU856623.1
|
|
chr16_-_36093776 | 0.04 |
ENSDART00000159134
|
OSCP1
|
organic solute carrier partner 1 |
chr9_+_55154414 | 0.03 |
ENSDART00000182924
|
ANOS1
|
anosmin 1 |
chr9_-_30555725 | 0.03 |
ENSDART00000079222
|
chaf1b
|
chromatin assembly factor 1, subunit B |
chr9_+_711822 | 0.03 |
ENSDART00000136627
|
ybey
|
ybeY metallopeptidase |
chr11_+_31323746 | 0.03 |
ENSDART00000180220
ENSDART00000189937 |
sipa1l2
|
signal-induced proliferation-associated 1 like 2 |
chr8_-_25729542 | 0.02 |
ENSDART00000078149
ENSDART00000085779 |
foxp3a
|
forkhead box P3a |
chr1_+_54655160 | 0.02 |
ENSDART00000190319
|
si:ch211-202h22.7
|
si:ch211-202h22.7 |
chr24_-_33801668 | 0.02 |
ENSDART00000079202
|
abcb8
|
ATP-binding cassette, sub-family B (MDR/TAP), member 8 |
chr6_-_42369186 | 0.02 |
ENSDART00000039868
|
usp4
|
ubiquitin specific peptidase 4 (proto-oncogene) |
chr2_-_26720854 | 0.02 |
ENSDART00000148110
|
si:dkey-181m9.8
|
si:dkey-181m9.8 |
chr17_+_41302660 | 0.02 |
ENSDART00000059480
|
fosl2
|
fos-like antigen 2 |
chr22_+_980290 | 0.01 |
ENSDART00000065377
|
def6b
|
differentially expressed in FDCP 6b homolog (mouse) |
chr20_-_49889111 | 0.01 |
ENSDART00000058858
|
kif13bb
|
kinesin family member 13Bb |
chr5_+_27897504 | 0.01 |
ENSDART00000130936
|
adam28
|
ADAM metallopeptidase domain 28 |
chr5_-_20123002 | 0.01 |
ENSDART00000026516
|
pxmp2
|
peroxisomal membrane protein 2 |
chr19_-_27336092 | 0.01 |
ENSDART00000176885
|
gtf2h4
|
general transcription factor IIH, polypeptide 4 |
chr3_+_32118670 | 0.01 |
ENSDART00000055287
ENSDART00000111688 |
zgc:109934
|
zgc:109934 |
chr16_-_26296477 | 0.01 |
ENSDART00000157553
|
erfl1
|
Ets2 repressor factor like 1 |
chr6_-_39218609 | 0.01 |
ENSDART00000133305
|
os9
|
osteosarcoma amplified 9, endoplasmic reticulum lectin |
chr21_-_22827548 | 0.01 |
ENSDART00000079161
|
angptl5
|
angiopoietin-like 5 |
chr11_+_2855430 | 0.01 |
ENSDART00000172837
|
kif21b
|
kinesin family member 21B |
chr10_-_11761927 | 0.01 |
ENSDART00000138748
|
adamts6
|
ADAM metallopeptidase with thrombospondin type 1 motif, 6 |
chr11_+_24340166 | 0.01 |
ENSDART00000188719
|
rbm39a
|
RNA binding motif protein 39a |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0010752 | regulation of cGMP-mediated signaling(GO:0010752) |
0.0 | 0.2 | GO:0051292 | nuclear pore complex assembly(GO:0051292) |
0.0 | 0.2 | GO:0032289 | central nervous system myelin formation(GO:0032289) |
0.0 | 0.1 | GO:0071361 | cellular response to ethanol(GO:0071361) |
0.0 | 0.4 | GO:0055117 | regulation of cardiac muscle contraction(GO:0055117) |
0.0 | 0.1 | GO:0019287 | isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287) |
0.0 | 0.1 | GO:0060049 | regulation of protein glycosylation(GO:0060049) |
0.0 | 0.1 | GO:0060282 | positive regulation of oocyte development(GO:0060282) |
0.0 | 0.1 | GO:0007217 | tachykinin receptor signaling pathway(GO:0007217) |
0.0 | 0.1 | GO:2000251 | positive regulation of actin cytoskeleton reorganization(GO:2000251) |
0.0 | 0.0 | GO:0031630 | regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031630) |
0.0 | 0.1 | GO:0046037 | GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037) |
0.0 | 0.1 | GO:1904071 | presynaptic active zone assembly(GO:1904071) |
0.0 | 0.0 | GO:0071675 | regulation of macrophage chemotaxis(GO:0010758) positive regulation of macrophage chemotaxis(GO:0010759) regulation of odontogenesis(GO:0042481) mononuclear cell migration(GO:0071674) regulation of mononuclear cell migration(GO:0071675) |
0.0 | 0.2 | GO:0030309 | poly-N-acetyllactosamine metabolic process(GO:0030309) poly-N-acetyllactosamine biosynthetic process(GO:0030311) |
0.0 | 0.1 | GO:0006369 | termination of RNA polymerase II transcription(GO:0006369) |
0.0 | 0.1 | GO:0040016 | embryonic cleavage(GO:0040016) positive regulation of myoblast fusion(GO:1901741) |
0.0 | 0.2 | GO:2000601 | positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0098982 | GABA-ergic synapse(GO:0098982) |
0.0 | 0.1 | GO:0070847 | core mediator complex(GO:0070847) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0000254 | C-4 methylsterol oxidase activity(GO:0000254) |
0.0 | 0.1 | GO:0031835 | neurokinin receptor binding(GO:0031834) substance P receptor binding(GO:0031835) |
0.0 | 0.1 | GO:0016300 | tRNA (uracil) methyltransferase activity(GO:0016300) |
0.0 | 0.1 | GO:0003938 | IMP dehydrogenase activity(GO:0003938) |
0.0 | 0.2 | GO:0071933 | Arp2/3 complex binding(GO:0071933) |
0.0 | 0.1 | GO:1990247 | N6-methyladenosine-containing RNA binding(GO:1990247) |
0.0 | 0.1 | GO:0000035 | acyl binding(GO:0000035) |
0.0 | 0.2 | GO:0016405 | CoA-ligase activity(GO:0016405) |
0.0 | 0.2 | GO:0008532 | N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity(GO:0008532) |
0.0 | 0.1 | GO:0016312 | inositol bisphosphate phosphatase activity(GO:0016312) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS | Genes involved in Presynaptic nicotinic acetylcholine receptors |