PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
her6 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000006514	hairy-related 6
her9 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000056438	hairy-related 9
her6 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000111099	hairy-related 6
her9 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000115775	hairy-related 9

Gene	Promoter	Pearson corr. coef.	P-value	Plot
her6	dr11_v1_chr6_-_36552844_36552844	-0.38	5.3e-01	Click!
her9	dr11_v1_chr23_-_23401305_23401305	-0.23	7.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_+_68789 Show fit	0.15	ENSDART00000058569	cldn1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	claudin 1
chr5_-_12560569 Show fit	0.14	ENSDART00000133587	wsb2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat and SOCS box containing 2
chr1_+_31942961 Show fit	0.12	ENSDART00000007522	anos1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	anosmin 1a
chr5_-_29122834 Show fit	0.11	ENSDART00000087197	whrnb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	whirlin b
chr5_-_29122615 Show fit	0.10	ENSDART00000144802	whrnb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	whirlin b
chr18_+_3169579 Show fit	0.09	ENSDART00000164724 ENSDART00000186340 ENSDART00000181247 ENSDART00000168056	pak1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	p21 protein (Cdc42/Rac)-activated kinase 1
chr4_-_77551860 Show fit	0.08	ENSDART00000188176	AL935186.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr17_-_3986236 Show fit	0.08	ENSDART00000188794 ENSDART00000160830	PLCB1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-140o9.2
chr13_+_7241170 Show fit	0.07	ENSDART00000109434	aifm2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	apoptosis-inducing factor, mitochondrion-associated, 2
chr19_-_35450661 Show fit	0.07	ENSDART00000113574 ENSDART00000136895	anln Links NCBI UniProt ZFIN ENSEMBL Google Show fit	anillin, actin binding protein
chr8_+_36509885 Show fit	0.07	ENSDART00000109530	slc7a4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 7, member 4
chr7_+_24528430 Show fit	0.07	ENSDART00000133022	si:dkeyp-75h12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-75h12.2
chr15_-_12319065 Show fit	0.07	ENSDART00000162973 ENSDART00000170543	fxyd6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FXYD domain containing ion transport regulator 6
chr25_+_19954576 Show fit	0.07	ENSDART00000149335	kcna1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium voltage-gated channel, shaker-related subfamily, member 1a
chr7_+_529522 Show fit	0.07	ENSDART00000190811	nrxn2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neurexin 2b
chr21_-_44731865 Show fit	0.07	ENSDART00000013814	ammecr1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human)
chr8_-_39977026 Show fit	0.06	ENSDART00000141707	asphd2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	aspartate beta-hydroxylase domain containing 2
chr19_-_15397946 Show fit	0.06	ENSDART00000143480	hivep3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	human immunodeficiency virus type I enhancer binding protein 3a
chr24_-_33291784 Show fit	0.06	ENSDART00000124938	si:ch1073-406l10.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-406l10.2
chr4_-_77563411 Show fit	0.06	ENSDART00000186841	AL935186.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr4_+_9669717 Show fit	0.06	ENSDART00000004604	si:dkey-153k10.9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-153k10.9
chr13_+_35925490 Show fit	0.06	ENSDART00000046115	mfsd2aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	major facilitator superfamily domain containing 2aa
chr15_-_1765098 Show fit	0.06	ENSDART00000149980 ENSDART00000093074	bud23 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BUD23, rRNA methyltransferase and ribosome maturation factor
chr9_+_500052 Show fit	0.06	ENSDART00000166707	CU984600.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr19_-_6385594 Show fit	0.06	ENSDART00000104950	atp1a3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase Na+/K+ transporting subunit alpha 3a
chr10_-_2942900 Show fit	0.05	ENSDART00000002622	oclna Links NCBI UniProt ZFIN ENSEMBL Google Show fit	occludin a
chr14_-_2189889 Show fit	0.05	ENSDART00000181557 ENSDART00000106707	pcdh2ab9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit pcdh2ab11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protocadherin 2 alpha b 9 protocadherin 2 alpha b 11
chr2_+_58841181 Show fit	0.05	ENSDART00000164102	cirbpa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cold inducible RNA binding protein a
chr20_-_8304271 Show fit	0.05	ENSDART00000179057	dab1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Dab, reelin signal transducer, homolog 1a (Drosophila)
chr3_-_29977495 Show fit	0.05	ENSDART00000077111	hsd17b14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hydroxysteroid (17-beta) dehydrogenase 14
chr14_-_30387894 Show fit	0.05	ENSDART00000176136	slc7a2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr20_-_16498991 Show fit	0.04	ENSDART00000104137	ches1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	checkpoint suppressor 1
chr18_+_41772474 Show fit	0.04	ENSDART00000097547	trpc6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transient receptor potential cation channel, subfamily C, member 6b
chr5_-_32890807 Show fit	0.04	ENSDART00000007512	pole3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	polymerase (DNA directed), epsilon 3 (p17 subunit)
chr5_-_54395488 Show fit	0.04	ENSDART00000160781	zmynd19 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, MYND-type containing 19
chr9_-_6624663 Show fit	0.04	ENSDART00000092537	GPR45 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-118h3.5
chr3_+_431208 Show fit	0.04	ENSDART00000154296 ENSDART00000048733	si:ch73-308m11.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit si:dkey-167k11.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-308m11.1 si:dkey-167k11.5
chr14_-_32520295 Show fit	0.04	ENSDART00000165463	atp11c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase phospholipid transporting 11C
chr11_-_12800945 Show fit	0.04	ENSDART00000191178	txlng Links NCBI UniProt ZFIN ENSEMBL Google Show fit	taxilin gamma
chr3_-_11828206 Show fit	0.03	ENSDART00000018159	si:ch211-262e15.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-262e15.1
chr11_-_12801157 Show fit	0.03	ENSDART00000103449	txlng Links NCBI UniProt ZFIN ENSEMBL Google Show fit	taxilin gamma
chr23_+_44732863 Show fit	0.03	ENSDART00000160044 ENSDART00000172268	atp1b2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase Na+/K+ transporting subunit beta 2a
chr3_-_58823762 Show fit	0.03	ENSDART00000101253	luc7l3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LUC7-like 3 pre-mRNA splicing factor
chr25_+_388258 Show fit	0.03	ENSDART00000166834	rfx7b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	regulatory factor X7b
chr2_-_58257624 Show fit	0.03	ENSDART00000098940	foxl2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	forkhead box L2b
chr7_+_17938128 Show fit	0.03	ENSDART00000141044	mta2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	metastasis associated 1 family, member 2
chr1_-_22756898 Show fit	0.03	ENSDART00000158915	prom1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	prominin 1 b
chr1_+_49955869 Show fit	0.03	ENSDART00000150517	gstcd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutathione S-transferase, C-terminal domain containing
chr5_-_36916790 Show fit	0.03	ENSDART00000143827	kptn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kaptin (actin binding protein)
chr20_-_6196989 Show fit	0.02	ENSDART00000013343	b4galt6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
chr4_+_68562464 Show fit	0.02	ENSDART00000192954	BX548011.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr3_+_14641962 Show fit	0.02	ENSDART00000091070	zgc:158403 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:158403
chr13_-_45022301 Show fit	0.02	ENSDART00000183589 ENSDART00000125633 ENSDART00000074787	khdrbs1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	KH domain containing, RNA binding, signal transduction associated 1a
chr1_+_37195919 Show fit	0.02	ENSDART00000159684 ENSDART00000172742 ENSDART00000158395	dclk2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	doublecortin-like kinase 2a
chr25_-_21280584 Show fit	0.02	ENSDART00000143644	tmem60 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 60
chr17_-_20666616 Show fit	0.02	ENSDART00000020167	slc16a9a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 16, member 9a
chr21_+_1647990 Show fit	0.02	ENSDART00000148540	fech Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ferrochelatase
chr13_-_45022527 Show fit	0.02	ENSDART00000159021	khdrbs1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	KH domain containing, RNA binding, signal transduction associated 1a
chr1_-_52461322 Show fit	0.02	ENSDART00000083836	si:ch211-217k17.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-217k17.7
chr1_+_37196106 Show fit	0.02	ENSDART00000008756 ENSDART00000157503 ENSDART00000162971 ENSDART00000191004 ENSDART00000078206 ENSDART00000045111	dclk2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	doublecortin-like kinase 2a
chr24_+_39537565 Show fit	0.02	ENSDART00000140868 ENSDART00000145358	si:dkey-161j23.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-161j23.5
chr14_+_12109535 Show fit	0.01	ENSDART00000054620 ENSDART00000121913	kctd12b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium channel tetramerisation domain containing 12b
chr3_-_8765165 Show fit	0.01	ENSDART00000191131	CABZ01058333.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr6_-_40195510 Show fit	0.01	ENSDART00000156156	col7a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collagen, type VII, alpha 1
chr20_-_5328637 Show fit	0.01	ENSDART00000075974	ism2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	isthmin 2b
chr23_-_6765653 Show fit	0.01	ENSDART00000192310	FP102169.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr16_+_11029762 Show fit	0.01	ENSDART00000091183	erfl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ets2 repressor factor like 3
chr4_+_62576422 Show fit	0.01	ENSDART00000180679	si:ch211-79g12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-79g12.2
chr9_-_43538328 Show fit	0.01	ENSDART00000140526	znf385b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 385B
chr7_-_6438544 Show fit	0.00	ENSDART00000173180	zgc:165555 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:165555
chr14_-_41075262 Show fit	0.00	ENSDART00000180518	drp2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dystrophin related protein 2
chr14_+_15064870 Show fit	0.00	ENSDART00000167075	nkx1.2lb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NK1 transcription factor related 2-like,b
chr20_-_40766387 Show fit	0.00	ENSDART00000061173	hsdl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hydroxysteroid dehydrogenase like 1
chr14_+_12110020 Show fit	0.00	ENSDART00000192462	kctd12b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium channel tetramerisation domain containing 12b

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0008356	asymmetric cell division(GO:0008356)
0.0	0.1	GO:0003232	bulbus arteriosus development(GO:0003232)
0.0	0.1	GO:0035633	maintenance of blood-brain barrier(GO:0035633)
0.0	0.1	GO:0036265	RNA (guanine-N7)-methylation(GO:0036265)
0.0	0.2	GO:0060088	auditory receptor cell stereocilium organization(GO:0060088)
0.0	0.0	GO:0048496	maintenance of organ identity(GO:0048496)
0.0	0.0	GO:0006272	leading strand elongation(GO:0006272)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0002141	stereocilia coupling link(GO:0002139) stereocilia ankle link(GO:0002141) stereocilia ankle link complex(GO:0002142) stereocilium tip(GO:0032426)
0.0	0.0	GO:0008622	epsilon DNA polymerase complex(GO:0008622)
0.0	0.1	GO:0005826	actomyosin contractile ring(GO:0005826)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0016649	electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	PID EPHA2 FWD PATHWAY	EPHA2 forward signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME TIGHT JUNCTION INTERACTIONS	Genes involved in Tight junction interactions
0.0	0.1	REACTOME CD28 DEPENDENT VAV1 PATHWAY	Genes involved in CD28 dependent Vav1 pathway