PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
hmx1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000095651	H6 family homeobox 1
hmx3b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000096716	H6 family homeobox 3b
hmx1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000109725	H6 family homeobox 1
hmx1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000111765	H6 family homeobox 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
hmx1	dr11_v1_chr1_-_40914752_40914752	0.19	7.6e-01	Click!
hmx3b	dr11_v1_chr12_-_49154934_49154934	0.06	9.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_-_42272517 Show fit	0.13	ENSDART00000137692 ENSDART00000164363	si:ch211-207c6.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-207c6.2
chr14_-_9128919 Show fit	0.09	ENSDART00000108641	sh2d1ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SH2 domain containing 1A duplicate b
chr14_+_14568437 Show fit	0.09	ENSDART00000164749	pcdh20 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protocadherin 20
chr20_-_23426339 Show fit	0.08	ENSDART00000004625	zar1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zygote arrest 1
chr19_+_9295244 Show fit	0.07	ENSDART00000132255 ENSDART00000144299	si:ch73-15n24.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-15n24.1
chr5_+_43782267 Show fit	0.06	ENSDART00000130355	nos2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nitric oxide synthase 2a, inducible
chr13_-_50108337 Show fit	0.06	ENSDART00000133308	nid1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nidogen 1a
chr11_+_18130300 Show fit	0.06	ENSDART00000169146	zgc:175135 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:175135
chr18_-_5595546 Show fit	0.06	ENSDART00000191825	cyp1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome P450, family 1, subfamily A
chr22_-_20695237 Show fit	0.06	ENSDART00000112722	org Links NCBI UniProt ZFIN ENSEMBL Google Show fit	oogenesis-related gene
chr7_+_66565930 Show fit	0.06	ENSDART00000154597	tmem176l.3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 176l.3b
chr18_-_20458412 Show fit	0.05	ENSDART00000012241	kif23 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin family member 23
chr11_+_18157260 Show fit	0.05	ENSDART00000144659	zgc:173545 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:173545
chr11_+_18183220 Show fit	0.05	ENSDART00000113468	LO018315.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr22_+_16293071 Show fit	0.05	ENSDART00000170960	dbt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dihydrolipoamide branched chain transacylase E2
chr9_-_36924388 Show fit	0.05	ENSDART00000059756	ralba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	v-ral simian leukemia viral oncogene homolog Ba (ras related)
chr1_-_56032619 Show fit	0.05	ENSDART00000143793	c3a.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	complement component c3a, duplicate 4
chr25_+_3327071 Show fit	0.05	ENSDART00000136131 ENSDART00000133243	ldhbb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lactate dehydrogenase Bb
chr25_+_3326885 Show fit	0.05	ENSDART00000104866	ldhbb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lactate dehydrogenase Bb
chr8_-_23194408 Show fit	0.05	ENSDART00000141090	si:ch211-196c10.15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-196c10.15
chr3_-_26244256 Show fit	0.04	ENSDART00000103741	ppp4ca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 4, catalytic subunit a
chr5_-_69620722 Show fit	0.04	ENSDART00000097248	aldh2.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	aldehyde dehydrogenase 2 family (mitochondrial), tandem duplicate 2
chr22_+_1313046 Show fit	0.04	ENSDART00000170421	si:ch73-138e16.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-138e16.6
chr7_+_17443567 Show fit	0.04	ENSDART00000060383	nitr2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	novel immune-type receptor 2b
chr3_+_26244353 Show fit	0.04	ENSDART00000103733	atad5a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase family, AAA domain containing 5a
chr8_-_46486009 Show fit	0.04	ENSDART00000140431	sult1st9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sulfotransferase family 1, cytosolic sulfotransferase 9
chr16_+_25163443 Show fit	0.04	ENSDART00000105514	znf576.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 576, tandem duplicate 2
chr18_-_25568994 Show fit	0.04	ENSDART00000133029	si:ch211-13k12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-13k12.2
chr10_-_44560165 Show fit	0.04	ENSDART00000181217 ENSDART00000076084	npm2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nucleophosmin/nucleoplasmin, 2b
chr10_+_35439952 Show fit	0.03	ENSDART00000006284	hhla2a.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HERV-H LTR-associating 2a, tandem duplicate 2
chr21_-_37973819 Show fit	0.03	ENSDART00000133405	ripply1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ripply transcriptional repressor 1
chr11_-_7261717 Show fit	0.03	ENSDART00000128959	zgc:113223 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113223
chr14_-_3381303 Show fit	0.03	ENSDART00000171601	im:7150988 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	im:7150988
chr4_-_4751981 Show fit	0.03	ENSDART00000147436 ENSDART00000092984 ENSDART00000158466	creb3l2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cAMP responsive element binding protein 3-like 2
chr6_-_37422841 Show fit	0.03	ENSDART00000138351	cth Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cystathionase (cystathionine gamma-lyase)
chr5_+_32835219 Show fit	0.03	ENSDART00000140832 ENSDART00000186055	si:ch211-208h16.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-208h16.4
chr16_-_42965192 Show fit	0.03	ENSDART00000113714	mtx1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	metaxin 1a
chr8_+_22472584 Show fit	0.03	ENSDART00000138303	si:dkey-23c22.9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-23c22.9
chr10_-_33297864 Show fit	0.03	ENSDART00000163360	PRDM15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PR/SET domain 15
chr2_-_38114370 Show fit	0.03	ENSDART00000131837	chd8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chromodomain helicase DNA binding protein 8
chr22_-_6988102 Show fit	0.03	ENSDART00000185618	fgfr1bl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibroblast growth factor receptor 1b, like
chr22_+_1911269 Show fit	0.02	ENSDART00000164158 ENSDART00000168205	znf1156 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 1156
chr19_-_19379084 Show fit	0.02	ENSDART00000165206	smarcc1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b
chr5_-_14326959 Show fit	0.02	ENSDART00000137355	tet3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tet methylcytosine dioxygenase 3
chr15_-_1822548 Show fit	0.02	ENSDART00000082026 ENSDART00000180230	mmp28 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	matrix metallopeptidase 28
chr20_+_37295006 Show fit	0.02	ENSDART00000153137	cx23 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 23
chr13_-_37109987 Show fit	0.02	ENSDART00000136750	syne2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	spectrin repeat containing, nuclear envelope 2b
chr5_+_11290851 Show fit	0.02	ENSDART00000180408	CABZ01077124.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr18_-_33080454 Show fit	0.02	ENSDART00000191907	v2ra18 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	vomeronasal 2 receptor, a18
chr2_-_17115256 Show fit	0.02	ENSDART00000190488	pif1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
chr4_+_20576857 Show fit	0.02	ENSDART00000125340	BX248410.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr2_+_16652238 Show fit	0.02	ENSDART00000091351	gk5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycerol kinase 5 (putative)
chr3_+_18807006 Show fit	0.02	ENSDART00000180091	tnpo2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transportin 2 (importin 3, karyopherin beta 2b)
chr10_+_43039947 Show fit	0.02	ENSDART00000193434	atg10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATG10 autophagy related 10 homolog (S. cerevisiae)
chr6_+_4528631 Show fit	0.01	ENSDART00000122042	RNF219 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein 219
chr6_+_22326624 Show fit	0.01	ENSDART00000020333	rae1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonucleic acid export 1
chr17_+_7510220 Show fit	0.01	ENSDART00000192648	klhl10b.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kelch-like family member 10b, tandem duplicate 1
chr15_+_1134870 Show fit	0.01	ENSDART00000155392	p2ry13 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	purinergic receptor P2Y13
chr23_-_18913032 Show fit	0.01	ENSDART00000136678	si:ch211-209j10.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-209j10.6
chr19_+_11217279 Show fit	0.01	ENSDART00000181859	si:ch73-109i22.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-109i22.2
chr21_+_26657404 Show fit	0.01	ENSDART00000129035 ENSDART00000186550	prdx5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	peroxiredoxin 5
chr4_-_43388943 Show fit	0.01	ENSDART00000150796	si:dkey-29j8.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-29j8.2
chr4_-_18741942 Show fit	0.01	ENSDART00000145747 ENSDART00000066980 ENSDART00000186518	atxn10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ataxin 10
chr9_+_43799829 Show fit	0.01	ENSDART00000186240	ube2e3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
chr22_-_4649238 Show fit	0.01	ENSDART00000125302	fbn2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibrillin 2b
chr15_-_14884332 Show fit	0.01	ENSDART00000165237	si:ch211-24o8.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-24o8.4
chr17_+_50076501 Show fit	0.01	ENSDART00000156303	vps39 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	vacuolar protein sorting 39 homolog (S. cerevisiae)
chr20_+_28861435 Show fit	0.01	ENSDART00000142678	slc10a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 10 (sodium/bile acid cotransporter), member 1
chr5_-_25645593 Show fit	0.01	ENSDART00000044471	tmc2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane channel-like 2b
chr4_+_14727018 Show fit	0.01	ENSDART00000124189	cmasa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytidine monophosphate N-acetylneuraminic acid synthetase a
chr11_-_37691449 Show fit	0.01	ENSDART00000185340	zgc:158258 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:158258
chr4_-_76154252 Show fit	0.01	ENSDART00000161269	BX957252.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr22_+_724639 Show fit	0.01	ENSDART00000105323	zgc:162255 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:162255
chr24_+_26134209 Show fit	0.01	ENSDART00000038824	tmtopsb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	teleost multiple tissue opsin b
chr20_+_28861629 Show fit	0.00	ENSDART00000187274 ENSDART00000047826	slc10a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 10 (sodium/bile acid cotransporter), member 1
chr6_-_40352215 Show fit	0.00	ENSDART00000103992	ttll3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tubulin tyrosine ligase-like family, member 3
chr8_-_13013123 Show fit	0.00	ENSDART00000147802	dennd2da Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DENN/MADD domain containing 2Da
chr17_+_6563307 Show fit	0.00	ENSDART00000156454	adgrf3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adhesion G protein-coupled receptor F3a
chr5_+_37032038 Show fit	0.00	ENSDART00000045036	nfkbib Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
chr13_+_23176330 Show fit	0.00	ENSDART00000168351	sorbs1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorbin and SH3 domain containing 1
chr24_-_1021318 Show fit	0.00	ENSDART00000181403	ralaa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	v-ral simian leukemia viral oncogene homolog Aa (ras related)
chr11_+_29770966 Show fit	0.00	ENSDART00000088624 ENSDART00000124471	rpgrb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	retinitis pigmentosa GTPase regulator b
chr20_-_34164278 Show fit	0.00	ENSDART00000153128	hmcn1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hemicentin 1
chr15_+_33696559 Show fit	0.00	ENSDART00000188248 ENSDART00000161951	hdac12 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	histone deacetylase 12

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0070278	extracellular matrix constituent secretion(GO:0070278)
0.0	0.1	GO:0030825	regulation of cGMP metabolic process(GO:0030823) positive regulation of cGMP metabolic process(GO:0030825) regulation of cGMP biosynthetic process(GO:0030826) positive regulation of cGMP biosynthetic process(GO:0030828) regulation of guanylate cyclase activity(GO:0031282) positive regulation of guanylate cyclase activity(GO:0031284)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0004459	L-lactate dehydrogenase activity(GO:0004459)