PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
hoxb5a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000013057	homeobox B5a
hoxb5b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000054030	homeobox B5b
hoxb5b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000113174	homeobox B5b

Gene	Promoter	Pearson corr. coef.	P-value	Plot
hoxb5a	dr11_v1_chr3_+_23707691_23707691	0.69	2.0e-01	Click!
hoxb5b	dr11_v1_chr12_+_27129659_27129659	0.48	4.2e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr23_+_22656477 Show fit	0.26	ENSDART00000009337 ENSDART00000133322	eno1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	enolase 1a, (alpha)
chr20_-_29418620 Show fit	0.19	ENSDART00000172634	ryr3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ryanodine receptor 3
chr5_-_26284276 Show fit	0.18	ENSDART00000148608	arvcfb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ARVCF, delta catenin family member b
chr14_-_25078569 Show fit	0.17	ENSDART00000172802 ENSDART00000173345 ENSDART00000135004	matr3l1.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	matrin 3-like 1.1
chr9_+_30475563 Show fit	0.17	ENSDART00000133118	gja5a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gap junction protein, alpha 5a
chr7_+_30867008 Show fit	0.16	ENSDART00000193106	apba2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	amyloid beta (A4) precursor protein-binding, family A, member 2b
chr15_-_12500938 Show fit	0.16	ENSDART00000159627	scn4ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sodium channel, voltage-gated, type IV, beta a
chr22_+_11857356 Show fit	0.15	ENSDART00000179540	mras Links NCBI UniProt ZFIN ENSEMBL Google Show fit	muscle RAS oncogene homolog
chr19_+_46259619 Show fit	0.14	ENSDART00000158032	grinaa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1a (glutamate binding)
chr1_-_46981134 Show fit	0.14	ENSDART00000130607	pknox1.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pbx/knotted 1 homeobox 1.2
chr14_-_31893996 Show fit	0.13	ENSDART00000173222	gpr101 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G protein-coupled receptor 101
chr1_+_12766351 Show fit	0.13	ENSDART00000165785	pcdh10a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protocadherin 10a
chr4_+_3482312 Show fit	0.13	ENSDART00000109044	grm8a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamate receptor, metabotropic 8a
chr16_-_9980402 Show fit	0.13	ENSDART00000066372	id4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	inhibitor of DNA binding 4
chr24_-_29822913 Show fit	0.13	ENSDART00000160929	aglb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b
chr3_+_28831450 Show fit	0.12	ENSDART00000055422	flr Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fleer
chr22_+_696931 Show fit	0.12	ENSDART00000149712 ENSDART00000009756	gpr37l1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G protein-coupled receptor 37 like 1a
chr19_-_8600383 Show fit	0.12	ENSDART00000081546	trim46b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tripartite motif containing 46b
chr15_-_25099679 Show fit	0.11	ENSDART00000154628	rflnb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	refilin B
chr11_-_44030962 Show fit	0.11	ENSDART00000171910	FP016005.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr6_-_52156427 Show fit	0.10	ENSDART00000082821	rims4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	regulating synaptic membrane exocytosis 4
chr16_-_27640995 Show fit	0.10	ENSDART00000019658	nacad Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NAC alpha domain containing
chr5_-_41142467 Show fit	0.10	ENSDART00000129415	zfr Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger RNA binding protein
chr2_+_24317465 Show fit	0.10	ENSDART00000139339 ENSDART00000136284	mrpl34 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial ribosomal protein L34
chr8_+_44783424 Show fit	0.10	ENSDART00000025875	si:ch1073-459j12.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-459j12.1
chr9_-_12034444 Show fit	0.09	ENSDART00000038651	znf804a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 804A
chr10_+_35439952 Show fit	0.09	ENSDART00000006284	hhla2a.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HERV-H LTR-associating 2a, tandem duplicate 2
chr22_-_15385442 Show fit	0.09	ENSDART00000090975	tmem264 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 264
chr12_+_7865470 Show fit	0.09	ENSDART00000161683	BX548028.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr7_+_56889879 Show fit	0.09	ENSDART00000039810	myo9aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myosin IXAa
chr3_-_5413018 Show fit	0.08	ENSDART00000063138	vmo1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	vitelline membrane outer layer 1 homolog a
chr1_-_49498116 Show fit	0.08	ENSDART00000137357	zgc:175214 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:175214
chr17_+_15041647 Show fit	0.08	ENSDART00000108999	samd4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sterile alpha motif domain containing 4A
chr5_-_71838520 Show fit	0.08	ENSDART00000174396	CU927890.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr8_-_15398760 Show fit	0.08	ENSDART00000162011	agbl4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATP/GTP binding protein-like 4
chr10_+_2684958 Show fit	0.08	ENSDART00000112019	setd9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SET domain containing 9
chr9_+_6082793 Show fit	0.07	ENSDART00000192045	st6gal2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ST6 beta-galactosamide alpha-2,6-sialyltranferase 2a
chr21_-_43117327 Show fit	0.07	ENSDART00000122352	p4ha2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2
chr6_-_15603675 Show fit	0.07	ENSDART00000143502	lrrfip1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	leucine rich repeat (in FLII) interacting protein 1b
chr7_+_33314925 Show fit	0.07	ENSDART00000148590	coro2ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coronin, actin binding protein, 2Ba
chr23_-_637347 Show fit	0.07	ENSDART00000132175	l1camb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	L1 cell adhesion molecule, paralog b
chr23_+_39331216 Show fit	0.07	ENSDART00000160957	kcng1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium voltage-gated channel, subfamily G, member 1
chr2_-_42065069 Show fit	0.07	ENSDART00000140188	cspp1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosome and spindle pole associated protein 1b
chr15_-_12319065 Show fit	0.07	ENSDART00000162973 ENSDART00000170543	fxyd6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FXYD domain containing ion transport regulator 6
chr14_+_33723309 Show fit	0.06	ENSDART00000132488	apln Links NCBI UniProt ZFIN ENSEMBL Google Show fit	apelin
chr12_+_17436904 Show fit	0.06	ENSDART00000079130	atad1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase family, AAA domain containing 1b
chr7_-_5039562 Show fit	0.06	ENSDART00000154438	ltb4r Links NCBI UniProt ZFIN ENSEMBL Google Show fit	leukotriene B4 receptor
chr5_+_59392183 Show fit	0.06	ENSDART00000082983 ENSDART00000180882	clip2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CAP-GLY domain containing linker protein 2
chr15_-_2803313 Show fit	0.06	ENSDART00000060839	tgfb1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transforming growth factor, beta 1a
chr2_+_44426609 Show fit	0.06	ENSDART00000112711 ENSDART00000154188	kcnab1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium voltage-gated channel, shaker-related subfamily, beta member 1 b
chr1_-_8192418 Show fit	0.06	ENSDART00000136654	grapb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GRB2-related adaptor protein b
chr8_+_25962833 Show fit	0.05	ENSDART00000086583	si:dkey-72l14.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-72l14.4
chr22_-_7461603 Show fit	0.05	ENSDART00000170630	BX511034.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr11_-_2297832 Show fit	0.05	ENSDART00000158266	znf740a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 740a
chr18_+_33580391 Show fit	0.04	ENSDART00000189300	si:dkey-47k20.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-47k20.4
chr21_-_308852 Show fit	0.04	ENSDART00000151613	lhfpl2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LHFPL tetraspan subfamily member 2a
chr19_-_30904590 Show fit	0.04	ENSDART00000137633	si:ch211-194e15.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-194e15.5
chr12_-_7710563 Show fit	0.04	ENSDART00000187382	CABZ01050062.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr14_+_8476769 Show fit	0.04	ENSDART00000131773	dnajc4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DnaJ (Hsp40) homolog, subfamily C, member 4
chr22_+_17536989 Show fit	0.04	ENSDART00000149531	hnrnpm Links NCBI UniProt ZFIN ENSEMBL Google Show fit	heterogeneous nuclear ribonucleoprotein M
chr11_+_24957858 Show fit	0.04	ENSDART00000145647	sulf2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sulfatase 2a
chr15_-_35031523 Show fit	0.03	ENSDART00000154848	si:ch211-272b8.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-272b8.6
chr17_-_39772999 Show fit	0.03	ENSDART00000155727	pimr60 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 60
chr13_-_44819254 Show fit	0.03	ENSDART00000131673	si:dkeyp-2e4.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-2e4.8
chr15_+_32643873 Show fit	0.03	ENSDART00000189433	trpc4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transient receptor potential cation channel, subfamily C, member 4b
chr5_-_33769211 Show fit	0.03	ENSDART00000133504	dab2ipb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DAB2 interacting protein b
chr23_+_3513201 Show fit	0.03	ENSDART00000092258	spata2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	spermatogenesis associated 2
chr25_+_36316280 Show fit	0.03	ENSDART00000152735	si:ch211-113a14.11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-113a14.11
chr2_-_24317240 Show fit	0.03	ENSDART00000078975	trnau1apb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tRNA selenocysteine 1 associated protein 1b
chr1_+_42224769 Show fit	0.02	ENSDART00000177496 ENSDART00000184778 ENSDART00000110860	ctnna2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	catenin (cadherin-associated protein), alpha 2
chr5_-_16791223 Show fit	0.02	ENSDART00000192744	atad1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase family, AAA domain containing 1a
chr3_+_39579393 Show fit	0.02	ENSDART00000055170	cln3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ceroid-lipofuscinosis, neuronal 3
chr16_+_16826504 Show fit	0.02	ENSDART00000108691	kcnj14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium inwardly-rectifying channel, subfamily J, member 14
chr10_+_26944418 Show fit	0.02	ENSDART00000135493	frmd8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FERM domain containing 8
chr17_+_49081828 Show fit	0.02	ENSDART00000156492	tiam2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	T cell lymphoma invasion and metastasis 2a
chr20_+_53181017 Show fit	0.02	ENSDART00000189692 ENSDART00000177109	FIG4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FIG4 phosphoinositide 5-phosphatase
chr13_-_36134317 Show fit	0.02	ENSDART00000015664 ENSDART00000188301 ENSDART00000191073 ENSDART00000184192 ENSDART00000139593	pcnx Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pecanex homolog (Drosophila)
chr8_+_247163 Show fit	0.01	ENSDART00000122378	cep120 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 120
chr19_-_40175800 Show fit	0.01	ENSDART00000102904	illr4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immune-related, lectin-like receptor 4
chr20_+_51730658 Show fit	0.01	ENSDART00000010271	aida Links NCBI UniProt ZFIN ENSEMBL Google Show fit	axin interactor, dorsalization associated
chr25_+_35212919 Show fit	0.01	ENSDART00000180127	ano5a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	anoctamin 5a
chr6_-_19340889 Show fit	0.01	ENSDART00000181407	mif4gda Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MIF4G domain containing a
chr2_-_3038904 Show fit	0.00	ENSDART00000186795	guk1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanylate kinase 1a
chr7_-_72426484 Show fit	0.00	ENSDART00000190063	rph3ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	rabphilin 3A homolog (mouse), b
chr8_-_43847138 Show fit	0.00	ENSDART00000148358	adgrd1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adhesion G protein-coupled receptor D1
chr4_+_42295479 Show fit	0.00	ENSDART00000162279	znf1118 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 1118

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0061037	negative regulation of chondrocyte differentiation(GO:0032331) negative regulation of cartilage development(GO:0061037) negative regulation of chondrocyte development(GO:0061182) regulation of bone mineralization involved in bone maturation(GO:1900157) negative regulation of bone mineralization involved in bone maturation(GO:1900158) negative regulation of bone development(GO:1903011)
0.0	0.3	GO:0032889	regulation of vacuole fusion, non-autophagic(GO:0032889)
0.0	0.1	GO:1902259	regulation of delayed rectifier potassium channel activity(GO:1902259)
0.0	0.1	GO:0098529	neuromuscular junction development, skeletal muscle fiber(GO:0098529)
0.0	0.1	GO:0036372	opsin transport(GO:0036372)
0.0	0.1	GO:1902108	regulation of mitochondrial membrane permeability involved in apoptotic process(GO:1902108)
0.0	0.1	GO:0003307	regulation of Wnt signaling pathway involved in heart development(GO:0003307)
0.0	0.1	GO:0090133	mesendoderm migration(GO:0090133) cell migration involved in mesendoderm migration(GO:0090134)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0000015	phosphopyruvate hydratase complex(GO:0000015)
0.0	0.2	GO:0005790	smooth endoplasmic reticulum(GO:0005790)
0.0	0.1	GO:0005879	axonemal microtubule(GO:0005879)
0.0	0.1	GO:0005854	nascent polypeptide-associated complex(GO:0005854)
0.0	0.2	GO:0005922	connexon complex(GO:0005922)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0070735	protein-glycine ligase activity(GO:0070735) tubulin-glycine ligase activity(GO:0070738)
0.0	0.2	GO:0005219	ryanodine-sensitive calcium-release channel activity(GO:0005219) calcium-induced calcium release activity(GO:0048763)
0.0	0.3	GO:0004634	phosphopyruvate hydratase activity(GO:0004634)
0.0	0.1	GO:0004133	glycogen debranching enzyme activity(GO:0004133) 4-alpha-glucanotransferase activity(GO:0004134) amylo-alpha-1,6-glucosidase activity(GO:0004135)
0.0	0.1	GO:0031005	filamin binding(GO:0031005)
0.0	0.1	GO:0031704	apelin receptor binding(GO:0031704)
0.0	0.1	GO:0001642	group III metabotropic glutamate receptor activity(GO:0001642)
0.0	0.2	GO:0005243	gap junction channel activity(GO:0005243)