PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
noto Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000021201	notochord homeobox
vax1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000021916	ventral anterior homeobox 1
vax1 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000114230	ventral anterior homeobox 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
vax1	dr11_v1_chr17_-_21441464_21441464	0.49	4.0e-01	Click!
noto	dr11_v1_chr13_+_14976108_14976108	0.36	5.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr15_+_31701716 Show fit	0.18	ENSDART00000113370	b3glcta Links NCBI UniProt ZFIN ENSEMBL Google Show fit	beta 3-glucosyltransferase a
chr13_-_35808904 Show fit	0.17	ENSDART00000171667	map3k4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitogen-activated protein kinase kinase kinase 4
chr8_-_50888806 Show fit	0.16	ENSDART00000053750	acsl2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acyl-CoA synthetase long chain family member 2
chr23_-_1348933 Show fit	0.15	ENSDART00000168981	CABZ01078120.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr15_-_43284021 Show fit	0.14	ENSDART00000041677	serpine2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
chr1_-_50859053 Show fit	0.14	ENSDART00000132779 ENSDART00000137648	si:dkeyp-123h10.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-123h10.2
chr18_+_5137241 Show fit	0.13	ENSDART00000159601	serpini1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serpin peptidase inhibitor, clade I (neuroserpin), member 1
chr11_-_13107106 Show fit	0.12	ENSDART00000184477	elovl1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ELOVL fatty acid elongase 1b
chr6_+_32382743 Show fit	0.12	ENSDART00000190009	dock7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dedicator of cytokinesis 7
chr25_+_28825657 Show fit	0.12	ENSDART00000153625	nfybb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear transcription factor Y, beta b
chr1_-_51719110 Show fit	0.11	ENSDART00000190574	rnaseh2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonuclease H2, subunit A
chr2_+_50608099 Show fit	0.11	ENSDART00000185805 ENSDART00000111135	neurod6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuronal differentiation 6b
chr4_+_21129752 Show fit	0.11	ENSDART00000169764	syt1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptotagmin Ia
chr6_-_30954268 Show fit	0.11	ENSDART00000154523	pde4ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphodiesterase 4B, cAMP-specific a
chr17_+_24722646 Show fit	0.11	ENSDART00000138356	mtfr1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial fission regulator 1-like
chr22_-_21897203 Show fit	0.11	ENSDART00000158501 ENSDART00000105566 ENSDART00000136795	gna11a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanine nucleotide binding protein (G protein), alpha 11a (Gq class)
chr18_+_17827149 Show fit	0.10	ENSDART00000190237 ENSDART00000189345	ZNF423 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-216l23.1
chr8_+_20140321 Show fit	0.10	ENSDART00000012120	acsbg2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acyl-CoA synthetase bubblegum family member 2
chr9_+_38372216 Show fit	0.10	ENSDART00000141895	plcd4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phospholipase C, delta 4b
chr6_-_40581376 Show fit	0.09	ENSDART00000185412	tspo Links NCBI UniProt ZFIN ENSEMBL Google Show fit	translocator protein
chr19_+_2631565 Show fit	0.09	ENSDART00000171487	fam126a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 126, member A
chr10_+_7593185 Show fit	0.09	ENSDART00000162617 ENSDART00000162590 ENSDART00000171744	ppp2cb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 2, catalytic subunit, beta isozyme
chr3_+_27798094 Show fit	0.09	ENSDART00000075100 ENSDART00000151437	carhsp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium regulated heat stable protein 1
chr17_+_21902058 Show fit	0.09	ENSDART00000142178	plekha1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a
chr1_+_513986 Show fit	0.09	ENSDART00000109083 ENSDART00000081945	txnl4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thioredoxin-like 4B
chr20_-_37813863 Show fit	0.09	ENSDART00000147529	batf3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	basic leucine zipper transcription factor, ATF-like 3
chr18_-_2727764 Show fit	0.09	ENSDART00000160841	ARHGEF17 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-248g20.5
chr20_+_11731039 Show fit	0.09	ENSDART00000152215 ENSDART00000152585	si:ch211-155o21.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-155o21.3
chr6_+_40354424 Show fit	0.08	ENSDART00000047416	slc4a8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 4, sodium bicarbonate cotransporter, member 8
chr7_-_30174882 Show fit	0.08	ENSDART00000110409	frmd5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FERM domain containing 5
chr21_-_42876565 Show fit	0.08	ENSDART00000126480	zmp:0000001268 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zmp:0000001268
chr2_+_56265791 Show fit	0.07	ENSDART00000168335	homer3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	homer scaffolding protein 3a
chr13_+_35339182 Show fit	0.07	ENSDART00000019323	jag1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	jagged 1b
chr3_-_32902138 Show fit	0.07	ENSDART00000144026 ENSDART00000083874 ENSDART00000145443 ENSDART00000148239 ENSDART00000134917	kat7a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	K(lysine) acetyltransferase 7a
chr9_+_30421489 Show fit	0.06	ENSDART00000145025 ENSDART00000132058	zgc:113314 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113314
chr10_-_33621739 Show fit	0.06	ENSDART00000142655 ENSDART00000128049	hunk Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hormonally up-regulated Neu-associated kinase
chr10_-_2524917 Show fit	0.06	ENSDART00000188642	CU856539.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr20_+_29209615 Show fit	0.06	ENSDART00000062350	katnbl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	katanin p80 subunit B-like 1
chr20_-_46362606 Show fit	0.06	ENSDART00000153087	bmf2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BCL2 modifying factor 2
chr11_+_43043171 Show fit	0.06	ENSDART00000180344	CABZ01092982.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr18_-_2433011 Show fit	0.06	ENSDART00000181922 ENSDART00000193276	CR769778.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr4_-_73756673 Show fit	0.06	ENSDART00000174274 ENSDART00000192913 ENSDART00000113546	BX855614.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit si:dkey-262g12.14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit zgc:171551 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-262g12.14 zgc:171551
chr9_-_14683574 Show fit	0.05	ENSDART00000144022	pard3bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	par-3 family cell polarity regulator beta b
chr5_+_41477954 Show fit	0.05	ENSDART00000185871	pias2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein inhibitor of activated STAT, 2
chr5_-_66397688 Show fit	0.05	ENSDART00000161483	hip1rb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	huntingtin interacting protein 1 related b
chr11_-_42554290 Show fit	0.05	ENSDART00000130573	atp6ap1la Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase H+ transporting accessory protein 1 like a
chr16_+_43765993 Show fit	0.05	ENSDART00000149154	si:dkey-122a22.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-122a22.2
chr18_+_3332999 Show fit	0.05	ENSDART00000160857	gdpd4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycerophosphodiester phosphodiesterase domain containing 4a
chr9_-_5263947 Show fit	0.05	ENSDART00000088342	cytip Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytohesin 1 interacting protein
chr5_+_30635309 Show fit	0.05	ENSDART00000183769	abcg4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATP-binding cassette, sub-family G (WHITE), member 4a
chr10_+_16036246 Show fit	0.05	ENSDART00000141586 ENSDART00000135868 ENSDART00000065037 ENSDART00000124502	lmnb1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lamin B1
chr3_-_15734530 Show fit	0.05	ENSDART00000141142	mvp Links NCBI UniProt ZFIN ENSEMBL Google Show fit	major vault protein
chr21_-_26490186 Show fit	0.05	ENSDART00000009889	zgc:110540 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:110540
chr19_-_20430892 Show fit	0.05	ENSDART00000111409	tbc1d5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TBC1 domain family, member 5
chr16_-_7828838 Show fit	0.04	ENSDART00000191434 ENSDART00000108653	tcaim Links NCBI UniProt ZFIN ENSEMBL Google Show fit	T cell activation inhibitor, mitochondrial
chr16_+_13818743 Show fit	0.04	ENSDART00000090191	flcn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	folliculin
chr15_+_44366556 Show fit	0.04	ENSDART00000133449	GUCY1A2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanylate cyclase 1 soluble subunit alpha 2
chr4_+_9011448 Show fit	0.04	ENSDART00000192357	samm50l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting and assembly machinery component 50 homolog, like
chr15_+_1796313 Show fit	0.04	ENSDART00000126253	fam124b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 124B
chr3_-_15734358 Show fit	0.04	ENSDART00000137325	mvp Links NCBI UniProt ZFIN ENSEMBL Google Show fit	major vault protein
chr12_+_30265802 Show fit	0.04	ENSDART00000182412	afap1l2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	actin filament associated protein 1-like 2
chr17_+_16046314 Show fit	0.04	ENSDART00000154554 ENSDART00000154338 ENSDART00000155336	si:ch73-204p21.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-204p21.2
chr1_+_21731382 Show fit	0.04	ENSDART00000054395	pax5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired box 5
chr20_-_1635922 Show fit	0.04	ENSDART00000181502	CR846082.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr2_-_26720854 Show fit	0.04	ENSDART00000148110	si:dkey-181m9.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-181m9.8
chr5_+_41477526 Show fit	0.04	ENSDART00000153567	pias2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein inhibitor of activated STAT, 2
chr10_+_43039947 Show fit	0.03	ENSDART00000193434	atg10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATG10 autophagy related 10 homolog (S. cerevisiae)
chr20_+_29209767 Show fit	0.03	ENSDART00000141252	katnbl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	katanin p80 subunit B-like 1
chr10_+_29698467 Show fit	0.03	ENSDART00000163402	dlg2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	discs, large homolog 2 (Drosophila)
chr10_+_28160265 Show fit	0.03	ENSDART00000022484	rnft1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein, transmembrane 1
chr5_-_15283509 Show fit	0.03	ENSDART00000052712	gnb1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr19_-_2861444 Show fit	0.03	ENSDART00000169053	clec3bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	C-type lectin domain family 3, member Bb
chr20_-_14924858 Show fit	0.03	ENSDART00000047039	dnm3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dynamin 3a
chr5_+_20257225 Show fit	0.03	ENSDART00000127919	ssh1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	slingshot protein phosphatase 1a
chr12_+_22580579 Show fit	0.03	ENSDART00000171725 ENSDART00000192290	capgb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	capping protein (actin filament), gelsolin-like b
chr20_-_14925281 Show fit	0.03	ENSDART00000152641	dnm3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dynamin 3a
chr22_+_19218733 Show fit	0.03	ENSDART00000183212 ENSDART00000133595	si:dkey-21e2.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-21e2.7
chr12_+_47446158 Show fit	0.02	ENSDART00000152857	fmn2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	formin 2b
chr18_-_46256560 Show fit	0.02	ENSDART00000171375	si:dkey-244a7.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-244a7.1
chr19_+_32401278 Show fit	0.02	ENSDART00000184353	atxn1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ataxin 1a
chr7_-_12464412 Show fit	0.02	ENSDART00000178723	adamtsl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADAMTS-like 3
chr16_+_14707960 Show fit	0.02	ENSDART00000137912	col14a1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collagen, type XIV, alpha 1a
chr20_-_18382708 Show fit	0.02	ENSDART00000170864 ENSDART00000166762 ENSDART00000191333	vipas39 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
chr8_-_52562672 Show fit	0.02	ENSDART00000159333 ENSDART00000159974	si:ch73-199g24.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-199g24.2
chr3_-_61065055 Show fit	0.02	ENSDART00000074199	cacng1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium channel, voltage-dependent, gamma subunit 1b
chr13_+_15190677 Show fit	0.02	ENSDART00000142240 ENSDART00000129045	mavs Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial antiviral signaling protein
chr7_-_46777876 Show fit	0.02	ENSDART00000193954	tshz3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	teashirt zinc finger homeobox 3b
chr8_-_25034411 Show fit	0.02	ENSDART00000135973	nfyal Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear transcription factor Y, alpha, like
chr20_+_29209926 Show fit	0.01	ENSDART00000152949 ENSDART00000153016	katnbl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	katanin p80 subunit B-like 1
chr14_-_14640401 Show fit	0.01	ENSDART00000168027 ENSDART00000167521	znf185 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 185 with LIM domain
chr14_+_22591624 Show fit	0.01	ENSDART00000108987	gfra4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GDNF family receptor alpha 4b
chr16_+_13818500 Show fit	0.01	ENSDART00000135245	flcn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	folliculin
chr6_-_40922971 Show fit	0.01	ENSDART00000155363	sfi1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SFI1 centrin binding protein
chr15_-_22074315 Show fit	0.01	ENSDART00000149830	drd2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dopamine receptor D2a
chr12_+_34891529 Show fit	0.01	ENSDART00000015643	tbcc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tubulin folding cofactor C
chr14_-_4145594 Show fit	0.01	ENSDART00000077348	casp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	caspase 3, apoptosis-related cysteine peptidase b
chr11_-_40728380 Show fit	0.01	ENSDART00000023745	ccdc114 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 114
chr4_-_45100253 Show fit	0.01	ENSDART00000163870	si:dkey-51d8.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-51d8.3
chr24_-_35282568 Show fit	0.01	ENSDART00000167406 ENSDART00000088609	sntg1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	syntrophin, gamma 1
chr3_-_34084387 Show fit	0.00	ENSDART00000155365	ighv4-3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immunoglobulin heavy variable 4-3
chr21_-_37790727 Show fit	0.00	ENSDART00000162907	gabrb4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gamma-aminobutyric acid (GABA) A receptor, beta 4
chr12_+_20352400 Show fit	0.00	ENSDART00000066383	hbae5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hemoglobin, alpha embryonic 5
chr18_+_9362455 Show fit	0.00	ENSDART00000187025	sema3ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0043137	DNA replication, removal of RNA primer(GO:0043137)
0.0	0.1	GO:0051660	establishment of centrosome localization(GO:0051660)
0.0	0.0	GO:0045040	outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0	0.0	GO:0032757	interleukin-8 production(GO:0032637) regulation of interleukin-8 production(GO:0032677) positive regulation of interleukin-8 production(GO:0032757)
0.0	0.3	GO:0035338	long-chain fatty-acyl-CoA biosynthetic process(GO:0035338)
0.0	0.1	GO:2001256	regulation of store-operated calcium entry(GO:2001256)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0032299	ribonuclease H2 complex(GO:0032299)
0.0	0.1	GO:0042584	chromaffin granule membrane(GO:0042584)
0.0	0.1	GO:0016602	CCAAT-binding factor complex(GO:0016602)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0004523	RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0	0.1	GO:0035256	G-protein coupled glutamate receptor binding(GO:0035256)
0.0	0.2	GO:0047676	arachidonate-CoA ligase activity(GO:0047676)
0.0	0.1	GO:0031826	type 2A serotonin receptor binding(GO:0031826)
0.0	0.0	GO:0019777	Atg12 transferase activity(GO:0019777)