PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
nr2f1b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000017168	nuclear receptor subfamily 2, group F, member 1b
nr2f5 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000033172	nuclear receptor subfamily 2, group F, member 5

Gene	Promoter	Pearson corr. coef.	P-value	Plot
nr2f1b	dr11_v1_chr10_+_43797130_43797130	-0.96	1.0e-02	Click!
nr2f5	dr11_v1_chr16_+_46294337_46294337	-0.05	9.4e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr11_+_6010177 Show fit	0.58	ENSDART00000170047 ENSDART00000022526 ENSDART00000161001 ENSDART00000188999	gtpbp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GTP binding protein 3, mitochondrial
chr18_+_8340886 Show fit	0.51	ENSDART00000081132	cpt1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	carnitine palmitoyltransferase 1B (muscle)
chr7_+_4474880 Show fit	0.49	ENSDART00000143528	si:dkey-83f18.14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-83f18.14
chr3_-_19517462 Show fit	0.49	ENSDART00000162027	CU571315.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr20_+_53577502 Show fit	0.42	ENSDART00000126983	myh6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myosin, heavy chain 6, cardiac muscle, alpha
chr22_+_344763 Show fit	0.39	ENSDART00000181934	CU914780.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr21_+_28445052 Show fit	0.37	ENSDART00000077871	pygma Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphorylase, glycogen, muscle A
chr19_+_8606883 Show fit	0.37	ENSDART00000054469 ENSDART00000185264	s100a10a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	S100 calcium binding protein A10a
chr13_-_13754091 Show fit	0.36	ENSDART00000131255	ky Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kyphoscoliosis peptidase
chr18_-_49283058 Show fit	0.34	ENSDART00000076554	si:zfos-464b6.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:zfos-464b6.2
chr17_+_5351922 Show fit	0.32	ENSDART00000105394	runx2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	runt-related transcription factor 2a
chr18_-_11729 Show fit	0.31	ENSDART00000159781	WHAMM Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WAS protein homolog associated with actin, golgi membranes and microtubules
chr19_+_7938121 Show fit	0.30	ENSDART00000140053 ENSDART00000146649	si:dkey-266f7.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-266f7.5
chr5_+_64856666 Show fit	0.30	ENSDART00000050863	zgc:101858 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:101858
chr14_+_34558480 Show fit	0.30	ENSDART00000075170	pttg1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pituitary tumor-transforming 1
chr13_+_22249636 Show fit	0.29	ENSDART00000108472 ENSDART00000173123	synpo2la Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptopodin 2-like a
chr2_+_52847049 Show fit	0.29	ENSDART00000121980	creb3l3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cAMP responsive element binding protein 3-like 3b
chr24_+_42149453 Show fit	0.26	ENSDART00000128766	serpinb1l3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3
chr20_+_25581627 Show fit	0.25	ENSDART00000030229	cyp2p9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome P450, family 2, subfamily P, polypeptide 9
chr25_+_1549838 Show fit	0.25	ENSDART00000115001	avpr1aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	arginine vasopressin receptor 1Aa
chr19_+_26828502 Show fit	0.24	ENSDART00000183654 ENSDART00000126006 ENSDART00000185341	FP085398.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr10_-_76352 Show fit	0.24	ENSDART00000186560 ENSDART00000144722	dyrk1aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a
chr22_+_37888249 Show fit	0.24	ENSDART00000076082	fetub Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fetuin B
chr1_+_56229674 Show fit	0.23	ENSDART00000127714	c3a.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	complement component c3a, duplicate 2
chr1_+_144284 Show fit	0.22	ENSDART00000064061	prozb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein Z, vitamin K-dependent plasma glycoprotein b
chr15_-_41756454 Show fit	0.21	ENSDART00000139498 ENSDART00000099302	ftr72 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	finTRIM family, member 72
chr15_+_22394074 Show fit	0.21	ENSDART00000109931	oafa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	OAF homolog a (Drosophila)
chr4_-_13613148 Show fit	0.21	ENSDART00000067164 ENSDART00000111247	irf5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	interferon regulatory factor 5
chr24_+_42149296 Show fit	0.21	ENSDART00000154231	serpinb1l3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3
chr15_+_34933552 Show fit	0.19	ENSDART00000155368	zgc:66024 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:66024
chr4_-_77120928 Show fit	0.19	ENSDART00000174154	CU467646.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr20_-_16906623 Show fit	0.19	ENSDART00000012859 ENSDART00000171628	psma6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proteasome subunit alpha 6b
chr5_-_8910703 Show fit	0.19	ENSDART00000097221	adamts12 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 12
chr2_+_58841181 Show fit	0.19	ENSDART00000164102	cirbpa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cold inducible RNA binding protein a
chr24_+_37700259 Show fit	0.18	ENSDART00000066556	zmp:0000000624 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zmp:0000000624
chr8_+_23711842 Show fit	0.18	ENSDART00000128783	ppardb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	peroxisome proliferator-activated receptor delta b
chr13_+_50778187 Show fit	0.18	ENSDART00000159597	dntt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	deoxynucleotidyltransferase, terminal
chr8_-_13419049 Show fit	0.17	ENSDART00000133656	pimr101 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 101
chr8_-_13471916 Show fit	0.17	ENSDART00000146558	pimr105 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 105
chr1_-_20824411 Show fit	0.17	ENSDART00000182810	tll1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tolloid-like 1
chr24_-_22003031 Show fit	0.17	ENSDART00000133627	si:rp71-1f1.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:rp71-1f1.5
chr24_-_22015751 Show fit	0.16	ENSDART00000147055	si:rp71-1f1.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:rp71-1f1.6
chr1_-_18772241 Show fit	0.16	ENSDART00000147645 ENSDART00000133194 ENSDART00000147525 ENSDART00000191493	tbc1d1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
chr8_-_13454281 Show fit	0.15	ENSDART00000141959	CR354547.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr4_+_73215536 Show fit	0.15	ENSDART00000174290	LO018260.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Danio rerio protein NLRC3-like (LOC101883187), mRNA.
chr24_+_42127983 Show fit	0.15	ENSDART00000190157 ENSDART00000176032 ENSDART00000175790	wwp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WW domain containing E3 ubiquitin protein ligase 1
chr24_+_42132962 Show fit	0.14	ENSDART00000187739	wwp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WW domain containing E3 ubiquitin protein ligase 1
chr5_-_25084318 Show fit	0.14	ENSDART00000089339	dph7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	diphthamide biosynthesis 7
chr9_-_9980704 Show fit	0.14	ENSDART00000130243 ENSDART00000193475	ugt1ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UDP glucuronosyltransferase 1 family a, b
chr2_-_5502256 Show fit	0.14	ENSDART00000193037	saga Links NCBI UniProt ZFIN ENSEMBL Google Show fit	S-antigen; retina and pineal gland (arrestin) a
chr16_+_20895904 Show fit	0.14	ENSDART00000052662	hoxa13b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	homeobox A13b
chr13_-_50546634 Show fit	0.14	ENSDART00000192127	CU570781.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr8_-_13442871 Show fit	0.13	ENSDART00000144887	pimr106 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 106
chr8_-_13486258 Show fit	0.13	ENSDART00000137459	pimr104 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 104
chr4_+_9011448 Show fit	0.13	ENSDART00000192357	samm50l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting and assembly machinery component 50 homolog, like
chr22_-_26834043 Show fit	0.13	ENSDART00000087202	si:dkey-44g23.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-44g23.5
chr19_+_7506380 Show fit	0.12	ENSDART00000182837	prcc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	papillary renal cell carcinoma (translocation-associated)
chr17_+_389218 Show fit	0.12	ENSDART00000162898	si:rp71-62i8.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:rp71-62i8.1
chr7_+_27251376 Show fit	0.12	ENSDART00000173521 ENSDART00000173962	sox6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SRY (sex determining region Y)-box 6
chr5_+_54400971 Show fit	0.11	ENSDART00000169695	bspry Links NCBI UniProt ZFIN ENSEMBL Google Show fit	B-box and SPRY domain containing
chr1_-_55785722 Show fit	0.10	ENSDART00000142069 ENSDART00000043933	ndufb7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7
chr14_+_46118834 Show fit	0.10	ENSDART00000124417 ENSDART00000017785	naa15a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	N(alpha)-acetyltransferase 15, NatA auxiliary subunit a
chr4_+_1530287 Show fit	0.10	ENSDART00000067446	slc38a4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 38, member 4
chr22_+_18316144 Show fit	0.10	ENSDART00000137985	gatad2ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GATA zinc finger domain containing 2Ab
chr21_+_5882300 Show fit	0.09	ENSDART00000165065	uqcr10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquinol-cytochrome c reductase, complex III subunit X
chr18_-_6975175 Show fit	0.09	ENSDART00000134194	si:dkey-266m15.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-266m15.6
chr2_-_16449504 Show fit	0.09	ENSDART00000144801	atr Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATR serine/threonine kinase
chr17_+_14711765 Show fit	0.09	ENSDART00000012889	cx28.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 28.6
chr7_-_2039060 Show fit	0.08	ENSDART00000173879	si:cabz01007794.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:cabz01007794.1
chr14_+_2487672 Show fit	0.07	ENSDART00000170629 ENSDART00000123063	fgf18a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibroblast growth factor 18a
chr2_+_21605547 Show fit	0.06	ENSDART00000112014	mplkip Links NCBI UniProt ZFIN ENSEMBL Google Show fit	M-phase specific PLK1 interacting protein
chr4_+_9011825 Show fit	0.06	ENSDART00000058007	samm50l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting and assembly machinery component 50 homolog, like
chr15_-_34933560 Show fit	0.05	ENSDART00000006288	dhx16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DEAH (Asp-Glu-Ala-His) box polypeptide 16
chr23_+_25822742 Show fit	0.05	ENSDART00000184436	r3hdml Links NCBI UniProt ZFIN ENSEMBL Google Show fit	R3H domain containing-like
chr17_-_53282539 Show fit	0.05	ENSDART00000164953	FO704905.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr24_+_42117231 Show fit	0.05	ENSDART00000067734	snx16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting nexin 16
chr4_+_76441823 Show fit	0.04	ENSDART00000163932	si:dkey-16p6.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-16p6.1
chr9_+_500052 Show fit	0.04	ENSDART00000166707	CU984600.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr8_-_13428740 Show fit	0.04	ENSDART00000131826	CR354547.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr10_-_29831944 Show fit	0.04	ENSDART00000063923 ENSDART00000136264	zpr1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ZPR1 zinc finger
chr5_-_40292299 Show fit	0.04	ENSDART00000097525	snx18a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting nexin 18a
chr4_+_1722899 Show fit	0.03	ENSDART00000021139	fgfr1op2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FGFR1 oncogene partner 2
chr2_+_33382648 Show fit	0.03	ENSDART00000137207 ENSDART00000098831	slc6a9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr3_+_41917499 Show fit	0.03	ENSDART00000028673	lfng Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr18_+_7073130 Show fit	0.03	ENSDART00000101216 ENSDART00000148947	si:dkey-88e18.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-88e18.2
chr15_+_27364394 Show fit	0.02	ENSDART00000122101	tbx2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	T-box 2b
chr2_+_2904080 Show fit	0.02	ENSDART00000110416	eif2b5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eukaryotic translation initiation factor 2B, subunit 5 epsilon
chr1_-_40132831 Show fit	0.01	ENSDART00000135647	si:ch211-113e8.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-113e8.10
chr24_-_21991770 Show fit	0.01	ENSDART00000147296	si:rp71-1f1.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:rp71-1f1.4
chr1_-_26544268 Show fit	0.01	ENSDART00000152117	si:ch211-202n12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-202n12.2
chr7_-_26446726 Show fit	0.00	ENSDART00000173607	zgc:172079 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:172079

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0052576	carbohydrate localization(GO:0052575) carbohydrate storage(GO:0052576)
0.1	0.4	GO:0055014	atrial cardiac muscle cell development(GO:0055014)
0.1	0.2	GO:0045040	outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0	0.2	GO:0035124	embryonic caudal fin morphogenesis(GO:0035124)
0.0	0.5	GO:0009437	carnitine metabolic process(GO:0009437)
0.0	0.6	GO:0002098	tRNA wobble uridine modification(GO:0002098)
0.0	0.2	GO:0001992	regulation of systemic arterial blood pressure by vasopressin(GO:0001992)
0.0	0.2	GO:0010887	negative regulation of cholesterol storage(GO:0010887)
0.0	0.1	GO:1901207	regulation of heart looping(GO:1901207)
0.0	0.1	GO:0017196	N-terminal peptidyl-methionine acetylation(GO:0017196)
0.0	0.1	GO:0060612	adipose tissue development(GO:0060612)
0.0	0.3	GO:0033046	negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.0	0.1	GO:0002031	G-protein coupled receptor internalization(GO:0002031)
0.0	0.2	GO:0048026	positive regulation of mRNA splicing, via spliceosome(GO:0048026)
0.0	0.3	GO:0032233	positive regulation of actin filament bundle assembly(GO:0032233)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0001401	mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0	0.1	GO:0031415	NatA complex(GO:0031415)
0.0	0.2	GO:0019773	proteasome core complex, alpha-subunit complex(GO:0019773)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0008184	phosphorylase activity(GO:0004645) glycogen phosphorylase activity(GO:0008184)
0.1	0.5	GO:0004095	carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416)
0.1	0.3	GO:0004060	arylamine N-acetyltransferase activity(GO:0004060)
0.0	0.2	GO:0005000	vasopressin receptor activity(GO:0005000)
0.0	0.3	GO:0035497	cAMP response element binding(GO:0035497)
0.0	0.4	GO:0048306	calcium-dependent protein binding(GO:0048306)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	PID HNF3B PATHWAY	FOXA2 and FOXA3 transcription factor networks

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE	Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle
0.0	0.4	REACTOME STRIATED MUSCLE CONTRACTION	Genes involved in Striated Muscle Contraction
0.0	0.1	REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY	Genes involved in Regulation of the Fanconi anemia pathway