PRJNA207719: Tissue specific transcriptome profiling
Gene Symbol | Gene ID | Gene Info |
---|---|---|
phf21ab
|
ENSDARG00000021378 | PHD finger protein 21Ab |
rfx5
|
ENSDARG00000063258 | regulatory factor X, 5 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
phf21ab | dr11_v1_chr25_-_7759453_7759525 | -0.84 | 7.8e-02 | Click! |
rfx5 | dr11_v1_chr19_-_7495006_7495006 | -0.70 | 1.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_7110617 | 1.72 |
ENSDART00000104838
|
psmb8a
|
proteasome subunit beta 8A |
chr3_-_19561058 | 1.27 |
ENSDART00000079323
|
zgc:163079
|
zgc:163079 |
chr10_-_22797959 | 1.22 |
ENSDART00000183269
|
pcolcea
|
procollagen C-endopeptidase enhancer a |
chr21_+_33459524 | 0.99 |
ENSDART00000053205
|
cd74b
|
CD74 molecule, major histocompatibility complex, class II invariant chain b |
chr19_+_43297546 | 0.92 |
ENSDART00000168002
|
laptm5
|
lysosomal protein transmembrane 5 |
chr12_+_14084291 | 0.81 |
ENSDART00000189734
|
si:ch211-217a12.1
|
si:ch211-217a12.1 |
chr21_-_17290941 | 0.78 |
ENSDART00000147993
|
gfi1b
|
growth factor independent 1B transcription repressor |
chr1_-_7570181 | 0.72 |
ENSDART00000103588
|
mxa
|
myxovirus (influenza) resistance A |
chr4_-_76370630 | 0.69 |
ENSDART00000168831
ENSDART00000174313 |
si:ch73-158p21.3
|
si:ch73-158p21.3 |
chr4_-_75678082 | 0.68 |
ENSDART00000180201
|
si:dkey-165o8.1
|
si:dkey-165o8.1 |
chr7_-_3011514 | 0.68 |
ENSDART00000169589
|
zgc:171695
|
zgc:171695 |
chr16_-_13516745 | 0.67 |
ENSDART00000145410
|
si:dkeyp-69b9.3
|
si:dkeyp-69b9.3 |
chr4_+_7822773 | 0.63 |
ENSDART00000171391
|
si:ch1073-67j19.2
|
si:ch1073-67j19.2 |
chr9_-_31090593 | 0.63 |
ENSDART00000089136
|
gpr18
|
G protein-coupled receptor 18 |
chr2_-_37862380 | 0.61 |
ENSDART00000186005
|
si:ch211-284o19.8
|
si:ch211-284o19.8 |
chr3_-_29941357 | 0.60 |
ENSDART00000147732
ENSDART00000137973 ENSDART00000103523 |
grna
|
granulin a |
chr8_+_36142734 | 0.60 |
ENSDART00000159361
ENSDART00000161194 |
mhc2b
|
major histocompatibility complex class II integral membrane beta chain gene |
chr7_+_66822229 | 0.55 |
ENSDART00000112109
|
lyve1a
|
lymphatic vessel endothelial hyaluronic receptor 1a |
chr7_-_56606752 | 0.54 |
ENSDART00000138714
|
sult5a1
|
sulfotransferase family 5A, member 1 |
chr13_+_233482 | 0.50 |
ENSDART00000102511
|
cfap36
|
cilia and flagella associated protein 36 |
chr1_-_23274393 | 0.46 |
ENSDART00000147800
ENSDART00000130277 ENSDART00000054340 ENSDART00000054338 |
rpl9
|
ribosomal protein L9 |
chr8_-_36370552 | 0.45 |
ENSDART00000097932
ENSDART00000148323 |
si:busm1-104n07.3
|
si:busm1-104n07.3 |
chr11_-_24458786 | 0.45 |
ENSDART00000089713
|
mxra8a
|
matrix-remodelling associated 8a |
chr19_-_27588842 | 0.44 |
ENSDART00000121643
|
si:dkeyp-46h3.2
|
si:dkeyp-46h3.2 |
chr9_+_20780813 | 0.42 |
ENSDART00000142787
|
fam46c
|
family with sequence similarity 46, member C |
chr3_-_34102075 | 0.42 |
ENSDART00000151708
|
ighv5-2
|
immunoglobulin heavy variable 5-2 |
chr21_-_32097908 | 0.42 |
ENSDART00000147387
|
si:ch211-160j14.3
|
si:ch211-160j14.3 |
chr8_-_36412936 | 0.41 |
ENSDART00000159276
|
si:zfos-2070c2.3
|
si:zfos-2070c2.3 |
chr7_-_55051692 | 0.41 |
ENSDART00000170637
|
tpcn2
|
two pore segment channel 2 |
chr2_+_16173999 | 0.40 |
ENSDART00000177639
ENSDART00000157601 ENSDART00000190186 ENSDART00000045933 |
sh3glb1b
|
SH3-domain GRB2-like endophilin B1b |
chr7_-_26924903 | 0.40 |
ENSDART00000124363
|
alx4a
|
ALX homeobox 4a |
chr6_-_25165693 | 0.39 |
ENSDART00000167259
|
znf326
|
zinc finger protein 326 |
chr23_+_45025909 | 0.39 |
ENSDART00000188105
|
hmgb2b
|
high mobility group box 2b |
chr21_-_45920 | 0.38 |
ENSDART00000040422
|
bhmt
|
betaine-homocysteine methyltransferase |
chr15_-_38129845 | 0.36 |
ENSDART00000057095
|
si:dkey-24p1.1
|
si:dkey-24p1.1 |
chr18_+_8339596 | 0.32 |
ENSDART00000183323
ENSDART00000185397 |
BX276107.1
|
|
chr4_+_33095657 | 0.31 |
ENSDART00000150647
|
znf1112
|
zinc finger protein 1112 |
chr3_-_7912661 | 0.31 |
ENSDART00000161400
|
trim35-21
|
tripartite motif containing 35-21 |
chr18_+_8340886 | 0.30 |
ENSDART00000081132
|
cpt1b
|
carnitine palmitoyltransferase 1B (muscle) |
chr7_-_26049282 | 0.29 |
ENSDART00000136389
ENSDART00000101124 |
rnaseka
|
ribonuclease, RNase K a |
chr13_-_16066997 | 0.29 |
ENSDART00000184790
|
SPATA48
|
spermatogenesis associated 48 |
chr7_+_26049818 | 0.29 |
ENSDART00000173611
|
si:dkey-6n21.12
|
si:dkey-6n21.12 |
chr6_-_54348568 | 0.28 |
ENSDART00000156501
|
zgc:101577
|
zgc:101577 |
chr6_+_26309968 | 0.27 |
ENSDART00000153805
|
dzip1l
|
DAZ interacting zinc finger protein 1-like |
chr4_-_49982134 | 0.26 |
ENSDART00000186050
|
si:dkey-156k2.4
|
si:dkey-156k2.4 |
chr5_+_38662125 | 0.25 |
ENSDART00000136949
|
si:dkey-58f10.13
|
si:dkey-58f10.13 |
chr10_-_43294933 | 0.24 |
ENSDART00000062631
|
hapln1b
|
hyaluronan and proteoglycan link protein 1b |
chr18_-_21640389 | 0.22 |
ENSDART00000100857
|
slc38a8a
|
solute carrier family 38, member 8a |
chr4_-_43613424 | 0.22 |
ENSDART00000171524
|
si:dkey-16p6.4
|
si:dkey-16p6.4 |
chr13_+_22821647 | 0.21 |
ENSDART00000109798
ENSDART00000144094 |
dna2
|
DNA replication helicase/nuclease 2 |
chr8_-_32878228 | 0.21 |
ENSDART00000110897
|
si:dkey-56i24.1
|
si:dkey-56i24.1 |
chr4_+_30788743 | 0.20 |
ENSDART00000184557
|
si:dkey-178j11.5
|
si:dkey-178j11.5 |
chr4_-_36033377 | 0.19 |
ENSDART00000164348
ENSDART00000187058 |
zgc:174180
|
zgc:174180 |
chr15_-_17619306 | 0.19 |
ENSDART00000184011
|
adamts15b
|
ADAM metallopeptidase with thrombospondin type 1 motif, 15b |
chr4_+_68939595 | 0.18 |
ENSDART00000168331
ENSDART00000193212 |
si:dkey-264f17.2
|
si:dkey-264f17.2 |
chr4_-_330748 | 0.18 |
ENSDART00000067488
|
mrps10
|
mitochondrial ribosomal protein S10 |
chr8_-_11077230 | 0.16 |
ENSDART00000143844
|
dennd2c
|
DENN/MADD domain containing 2C |
chr20_+_43396318 | 0.15 |
ENSDART00000060910
|
pimr138
|
Pim proto-oncogene, serine/threonine kinase, related 138 |
chr10_-_16028082 | 0.15 |
ENSDART00000122540
|
aldh7a1
|
aldehyde dehydrogenase 7 family, member A1 |
chr25_+_27873836 | 0.14 |
ENSDART00000163801
|
iqub
|
IQ motif and ubiquitin domain containing |
chr9_-_41077934 | 0.14 |
ENSDART00000100342
|
ankar
|
ankyrin and armadillo repeat containing |
chr23_+_41831224 | 0.13 |
ENSDART00000171885
|
scp2b
|
sterol carrier protein 2b |
chr4_-_36032177 | 0.12 |
ENSDART00000170143
|
zgc:174180
|
zgc:174180 |
chr3_-_8873716 | 0.12 |
ENSDART00000171798
|
znf1150
|
zinc finger protein 1150 |
chr8_+_45294767 | 0.11 |
ENSDART00000191527
|
ubap2b
|
ubiquitin associated protein 2b |
chr15_+_32411660 | 0.10 |
ENSDART00000113443
|
si:dkey-285b23.4
|
si:dkey-285b23.4 |
chr8_+_20415824 | 0.09 |
ENSDART00000009081
ENSDART00000145444 |
mob3a
|
MOB kinase activator 3A |
chr22_+_34710473 | 0.09 |
ENSDART00000155906
|
hoga1
|
4-hydroxy-2-oxoglutarate aldolase 1 |
chr19_-_45534392 | 0.08 |
ENSDART00000163920
|
trps1
|
trichorhinophalangeal syndrome I |
chr13_-_17860307 | 0.07 |
ENSDART00000135920
ENSDART00000054579 |
march8
|
membrane-associated ring finger (C3HC4) 8 |
chr2_-_42958619 | 0.06 |
ENSDART00000144317
|
oc90
|
otoconin 90 |
chr20_+_39394308 | 0.06 |
ENSDART00000142554
|
pimr136
|
Pim proto-oncogene, serine/threonine kinase, related 136 |
chr18_-_3552414 | 0.05 |
ENSDART00000163762
ENSDART00000165434 ENSDART00000161197 ENSDART00000166841 ENSDART00000170260 |
dcun1d5
|
DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) |
chr22_+_34710036 | 0.05 |
ENSDART00000025820
|
hoga1
|
4-hydroxy-2-oxoglutarate aldolase 1 |
chr21_+_40239192 | 0.05 |
ENSDART00000135857
|
or115-9
|
odorant receptor, family F, subfamily 115, member 9 |
chr16_-_47301376 | 0.05 |
ENSDART00000169697
|
mios
|
missing oocyte, meiosis regulator, homolog (Drosophila) |
chr18_+_49225552 | 0.04 |
ENSDART00000135026
|
si:ch211-136a13.1
|
si:ch211-136a13.1 |
chr20_+_39373480 | 0.04 |
ENSDART00000136714
|
pimr131
|
Pim proto-oncogene, serine/threonine kinase, related 131 |
chr3_+_13929860 | 0.04 |
ENSDART00000164179
|
syce2
|
synaptonemal complex central element protein 2 |
chr20_+_39416729 | 0.03 |
ENSDART00000099993
ENSDART00000144133 |
pimr128
|
Pim proto-oncogene, serine/threonine kinase, related 128 |
chr1_-_26045007 | 0.03 |
ENSDART00000129259
|
gpank1
|
G patch domain and ankyrin repeats 1 |
chr16_+_40301056 | 0.03 |
ENSDART00000058578
|
rspo3
|
R-spondin 3 |
chr10_-_36618674 | 0.02 |
ENSDART00000135302
|
rsf1b.1
|
remodeling and spacing factor 1b, tandem duplicate 1 |
chr10_+_36092564 | 0.02 |
ENSDART00000086490
|
smyd4
|
SET and MYND domain containing 4 |
chr2_+_37837249 | 0.02 |
ENSDART00000113337
|
parp2
|
poly (ADP-ribose) polymerase 2 |
chr17_-_45040813 | 0.01 |
ENSDART00000075514
|
entpd5a
|
ectonucleoside triphosphate diphosphohydrolase 5a |
chr14_-_16476863 | 0.01 |
ENSDART00000089021
|
canx
|
calnexin |
chr13_+_9368621 | 0.00 |
ENSDART00000109126
|
alms1
|
Alstrom syndrome protein 1 |
chr1_+_23274710 | 0.00 |
ENSDART00000036448
|
lias
|
lipoic acid synthetase |
chr4_+_76440462 | 0.00 |
ENSDART00000174138
|
si:dkey-16p6.1
|
si:dkey-16p6.1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.0 | GO:0010935 | macrophage cytokine production(GO:0010934) regulation of macrophage cytokine production(GO:0010935) positive regulation of macrophage cytokine production(GO:0060907) negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902230) |
0.1 | 0.7 | GO:0051145 | smooth muscle cell differentiation(GO:0051145) |
0.1 | 0.7 | GO:0046685 | response to arsenic-containing substance(GO:0046685) |
0.1 | 0.6 | GO:0071340 | skeletal muscle acetylcholine-gated channel clustering(GO:0071340) |
0.1 | 0.3 | GO:0035332 | positive regulation of hippo signaling(GO:0035332) |
0.1 | 1.7 | GO:0010499 | proteasomal ubiquitin-independent protein catabolic process(GO:0010499) |
0.1 | 0.4 | GO:2000290 | regulation of myotome development(GO:2000290) |
0.0 | 0.2 | GO:0043137 | DNA replication, removal of RNA primer(GO:0043137) |
0.0 | 0.7 | GO:0006577 | amino-acid betaine metabolic process(GO:0006577) |
0.0 | 0.1 | GO:0032370 | positive regulation of lipid transport(GO:0032370) |
0.0 | 0.7 | GO:0019882 | antigen processing and presentation(GO:0019882) |
0.0 | 0.1 | GO:0046487 | glyoxylate metabolic process(GO:0046487) |
0.0 | 0.5 | GO:0051923 | sulfation(GO:0051923) |
0.0 | 0.6 | GO:0035025 | positive regulation of Rho protein signal transduction(GO:0035025) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.6 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.1 | 0.4 | GO:0044609 | DBIRD complex(GO:0044609) |
0.1 | 1.7 | GO:0005839 | proteasome core complex(GO:0005839) |
0.0 | 0.7 | GO:0098844 | postsynaptic endocytic zone membrane(GO:0098844) |
0.0 | 0.2 | GO:0042575 | DNA polymerase complex(GO:0042575) |
0.0 | 0.5 | GO:0000315 | organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.7 | GO:0004298 | threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003) |
0.1 | 0.4 | GO:0072345 | NAADP-sensitive calcium-release channel activity(GO:0072345) |
0.0 | 1.0 | GO:0042289 | MHC class II protein binding(GO:0042289) |
0.0 | 0.3 | GO:0016416 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
0.0 | 0.4 | GO:0008172 | S-methyltransferase activity(GO:0008172) |
0.0 | 0.8 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.0 | 0.2 | GO:0017108 | 5'-flap endonuclease activity(GO:0017108) |
0.0 | 0.4 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.0 | 0.4 | GO:0000993 | RNA polymerase II core binding(GO:0000993) |
0.0 | 0.1 | GO:0016833 | oxo-acid-lyase activity(GO:0016833) |
0.0 | 0.8 | GO:0030170 | pyridoxal phosphate binding(GO:0030170) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |
0.0 | 0.2 | REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND | Genes involved in Removal of the Flap Intermediate from the C-strand |
0.0 | 0.4 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |