PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
sox8b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000037782	SRY-box transcription factor 8b
sox8a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000105301	SRY-box transcription factor 8a

Gene	Promoter	Pearson corr. coef.	P-value	Plot
sox8a	dr11_v1_chr12_-_1085227_1085227	0.59	2.9e-01	Click!
sox8b	dr11_v1_chr3_-_62403550_62403550	-0.45	4.5e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr23_+_4890693 Show fit	0.30	ENSDART00000023537	tnnc1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	troponin C type 1a (slow)
chr23_-_35694171 Show fit	0.25	ENSDART00000077539	tuba1c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tubulin, alpha 1c
chr10_+_5268054 Show fit	0.16	ENSDART00000114491	ror2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	receptor tyrosine kinase-like orphan receptor 2
chr19_+_33553586 Show fit	0.16	ENSDART00000183477	runx1t1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr20_-_39273987 Show fit	0.15	ENSDART00000127173	clu Links NCBI UniProt ZFIN ENSEMBL Google Show fit	clusterin
chr7_+_73780936 Show fit	0.14	ENSDART00000092691	pea15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proliferation and apoptosis adaptor protein 15
chr2_+_9946121 Show fit	0.13	ENSDART00000100696	tsen15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TSEN15 tRNA splicing endonuclease subunit
chr12_-_33359654 Show fit	0.13	ENSDART00000001907	slc16a3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 16 (monocarboxylate transporter), member 3
chr20_-_39273505 Show fit	0.13	ENSDART00000153114	clu Links NCBI UniProt ZFIN ENSEMBL Google Show fit	clusterin
chr19_+_27448625 Show fit	0.13	ENSDART00000052352	ppp1r11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory (inhibitor) subunit 11
chr12_-_33359052 Show fit	0.12	ENSDART00000135943	slc16a3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 16 (monocarboxylate transporter), member 3
chr10_-_43334914 Show fit	0.12	ENSDART00000146660 ENSDART00000190288	hapln1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hyaluronan and proteoglycan link protein 1b
chr23_-_27235403 Show fit	0.12	ENSDART00000134418	si:dkey-157g16.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-157g16.6
chr2_+_23222939 Show fit	0.12	ENSDART00000026800	kifap3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin-associated protein 3b
chr14_+_6546516 Show fit	0.11	ENSDART00000097214	adam19b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADAM metallopeptidase domain 19b
chr1_+_25801648 Show fit	0.11	ENSDART00000129471	gucy1b1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanylate cyclase 1 soluble subunit beta 1
chr7_-_52849913 Show fit	0.10	ENSDART00000174133 ENSDART00000172951	map1aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microtubule-associated protein 1Aa
chr9_-_43538328 Show fit	0.10	ENSDART00000140526	znf385b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 385B
chr19_-_27448606 Show fit	0.09	ENSDART00000079251	vars2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	valyl-tRNA synthetase 2, mitochondrial (putative)
chr11_-_43226255 Show fit	0.09	ENSDART00000172929	sptbn1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	spectrin, beta, non-erythrocytic 1
chr13_-_44423 Show fit	0.09	ENSDART00000093247	gtf2a1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	general transcription factor IIA, 1-like
chr12_+_30705769 Show fit	0.09	ENSDART00000186448 ENSDART00000066259	kcnk1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium channel, subfamily K, member 1a
chr22_-_38621438 Show fit	0.09	ENSDART00000098330	nppc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	natriuretic peptide C
chr19_+_11432330 Show fit	0.09	ENSDART00000188065	PQLC1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PQ loop repeat containing 1
chr12_-_11593436 Show fit	0.09	ENSDART00000138954	plekha1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b
chr20_-_29505863 Show fit	0.08	ENSDART00000148278	klf11a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Kruppel-like factor 11a
chr7_+_25003851 Show fit	0.08	ENSDART00000144526	naa40 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
chr12_+_30706158 Show fit	0.08	ENSDART00000133869	kcnk1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium channel, subfamily K, member 1a
chr16_+_25095483 Show fit	0.08	ENSDART00000155032	si:ch211-261d7.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-261d7.3
chr19_+_12801940 Show fit	0.08	ENSDART00000040073	mc5ra Links NCBI UniProt ZFIN ENSEMBL Google Show fit	melanocortin 5a receptor
chr24_-_21923930 Show fit	0.08	ENSDART00000131944	tagln3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transgelin 3b
chr21_+_43669943 Show fit	0.08	ENSDART00000136025	tmlhe Links NCBI UniProt ZFIN ENSEMBL Google Show fit	trimethyllysine hydroxylase, epsilon
chr9_-_3034064 Show fit	0.08	ENSDART00000115138 ENSDART00000144046	rapgef4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rap guanine nucleotide exchange factor (GEF) 4
chr23_+_17878969 Show fit	0.08	ENSDART00000154934 ENSDART00000154140 ENSDART00000156331	si:ch73-390p7.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-390p7.2
chr20_-_37522569 Show fit	0.08	ENSDART00000177011 ENSDART00000058502	hivep2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	human immunodeficiency virus type I enhancer binding protein 2a
chr17_+_24687338 Show fit	0.08	ENSDART00000135794	selenon Links NCBI UniProt ZFIN ENSEMBL Google Show fit	selenoprotein N
chr1_+_38362412 Show fit	0.07	ENSDART00000075086	cep44 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 44
chr16_-_21047872 Show fit	0.07	ENSDART00000131582	cbx3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chromobox homolog 3b
chr18_-_20869175 Show fit	0.07	ENSDART00000090079	synm Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synemin, intermediate filament protein
chr21_+_39705483 Show fit	0.07	ENSDART00000147718 ENSDART00000168996	plrdgb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PITP-less RdgB-like protein
chr5_+_41146786 Show fit	0.07	ENSDART00000175766	sub1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SUB1 homolog, transcriptional regulator b
chr11_-_30138299 Show fit	0.07	ENSDART00000172106	scml2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Scm polycomb group protein like 2
chr3_-_5067585 Show fit	0.07	ENSDART00000169609	tefb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thyrotrophic embryonic factor b
chr21_+_32820175 Show fit	0.07	ENSDART00000076903	adra2db Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adrenergic, alpha-2D-, receptor b
chr7_+_17096281 Show fit	0.07	ENSDART00000035558	htatip2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HIV-1 Tat interactive protein 2
chr10_-_22249444 Show fit	0.06	ENSDART00000148831	fgf11b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibroblast growth factor 11b
chr20_+_30578967 Show fit	0.06	ENSDART00000010494	fgfr1op Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FGFR1 oncogene partner
chr10_+_15967643 Show fit	0.06	ENSDART00000136709	apbb1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)
chr5_-_54300725 Show fit	0.06	ENSDART00000163048	slc25a35 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 25, member 35
chr9_+_17423941 Show fit	0.06	ENSDART00000112884 ENSDART00000155233	kbtbd7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kelch repeat and BTB (POZ) domain containing 7
chr17_+_24604373 Show fit	0.06	ENSDART00000082193	zmpste24 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc metallopeptidase, STE24 homolog
chr17_+_14784275 Show fit	0.06	ENSDART00000005355	rtraf Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RNA transcription, translation and transport factor
chr21_+_34088377 Show fit	0.06	ENSDART00000170070	mtmr1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myotubularin related protein 1b
chr12_+_18544159 Show fit	0.06	ENSDART00000162900	mlst8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MTOR associated protein, LST8 homolog (S. cerevisiae)
chr14_+_597532 Show fit	0.05	ENSDART00000159805	LO018568.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr3_+_32663865 Show fit	0.05	ENSDART00000190240	si:dkey-16l2.16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-16l2.16
chr11_-_18015534 Show fit	0.05	ENSDART00000181953	qrich1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamine-rich 1
chr10_-_14545658 Show fit	0.05	ENSDART00000057865	ier3ip1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immediate early response 3 interacting protein 1
chr9_+_41156818 Show fit	0.05	ENSDART00000105764 ENSDART00000147052	stat4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	signal transducer and activator of transcription 4
chr11_+_30254556 Show fit	0.05	ENSDART00000182316	ppef1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase, EF-hand calcium binding domain 1
chr23_-_36418708 Show fit	0.04	ENSDART00000132273	znf740b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 740b
chr17_+_38476300 Show fit	0.04	ENSDART00000123298	stard9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	StAR-related lipid transfer (START) domain containing 9
chr18_+_5917625 Show fit	0.04	ENSDART00000169100	glg1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	golgi glycoprotein 1b
chr9_+_23714406 Show fit	0.04	ENSDART00000189445	gypc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycophorin C (Gerbich blood group)
chr19_-_11950434 Show fit	0.04	ENSDART00000024861	cpsf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cleavage and polyadenylation specific factor 1
chr21_-_13535601 Show fit	0.04	ENSDART00000139568	nsmfa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NMDA receptor synaptonuclear signaling and neuronal migration factor a
chr3_-_59981476 Show fit	0.04	ENSDART00000035878 ENSDART00000124038	cdr2l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cerebellar degeneration-related protein 2-like
chr19_-_11949996 Show fit	0.04	ENSDART00000163478 ENSDART00000167299	cpsf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cleavage and polyadenylation specific factor 1
chr24_-_41220538 Show fit	0.03	ENSDART00000150207	acvr2ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	activin A receptor type 2Ba
chr16_-_21047483 Show fit	0.03	ENSDART00000136235	cbx3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chromobox homolog 3b
chr24_-_3304664 Show fit	0.03	ENSDART00000183168	sugct Links NCBI UniProt ZFIN ENSEMBL Google Show fit	succinyl-CoA:glutarate-CoA transferase
chr15_-_9419472 Show fit	0.03	ENSDART00000122117	sacs Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sacsin molecular chaperone
chr25_-_37248795 Show fit	0.03	ENSDART00000087247 ENSDART00000154045	glg1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	golgi glycoprotein 1a
chr3_-_59981162 Show fit	0.03	ENSDART00000128790	cdr2l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cerebellar degeneration-related protein 2-like
chr7_-_50410524 Show fit	0.03	ENSDART00000083346	hypk Links NCBI UniProt ZFIN ENSEMBL Google Show fit	huntingtin interacting protein K
chr5_+_45138934 Show fit	0.03	ENSDART00000041412 ENSDART00000136002	smarca2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr13_-_8892514 Show fit	0.03	ENSDART00000144553	plekhh2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
chr2_+_51645164 Show fit	0.03	ENSDART00000169600	abhd4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	abhydrolase domain containing 4
chr3_+_41726360 Show fit	0.03	ENSDART00000154401	chst12a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	carbohydrate (chondroitin 4) sulfotransferase 12a
chr8_+_41238064 Show fit	0.03	ENSDART00000111321	zgc:152830 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:152830
chr1_-_16688965 Show fit	0.03	ENSDART00000079001 ENSDART00000178599	frg1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FSHD region gene 1
chr22_-_817479 Show fit	0.03	ENSDART00000123487	zgc:153675 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:153675
chr8_-_14052349 Show fit	0.02	ENSDART00000135811	atp2b3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase plasma membrane Ca2+ transporting 3a
chr7_-_18547420 Show fit	0.02	ENSDART00000173969	rgs12a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	regulator of G protein signaling 12a
chr10_+_7709724 Show fit	0.02	ENSDART00000097670	ggcx Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gamma-glutamyl carboxylase
chr20_+_54383838 Show fit	0.02	ENSDART00000157737	lrfn5b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	leucine rich repeat and fibronectin type III domain containing 5b
chr8_+_10862353 Show fit	0.02	ENSDART00000140717	brpf3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bromodomain and PHD finger containing, 3b
chr10_+_11398111 Show fit	0.02	ENSDART00000064210	cwc27 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CWC27 spliceosome-associated protein homolog (S. cerevisiae)
chr19_+_3653976 Show fit	0.02	ENSDART00000125673	nedd9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neural precursor cell expressed, developmentally down-regulated 9
chr10_+_9595575 Show fit	0.02	ENSDART00000091780 ENSDART00000184287	rc3h2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger and CCCH-type domains 2
chr1_+_6646529 Show fit	0.02	ENSDART00000144641 ENSDART00000103701 ENSDART00000138919	ube2f Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2F (putative)
chr15_+_3125136 Show fit	0.02	ENSDART00000130968	rcbtb2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
chr16_+_46111849 Show fit	0.02	ENSDART00000172232	sv2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptic vesicle glycoprotein 2A
chr3_+_62327332 Show fit	0.01	ENSDART00000158414	BX470259.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr7_+_52753067 Show fit	0.01	ENSDART00000053814	mtfmt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial methionyl-tRNA formyltransferase
chr24_-_33873451 Show fit	0.01	ENSDART00000159840	asic1c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acid-sensing (proton-gated) ion channel 1c
chr11_+_13176568 Show fit	0.01	ENSDART00000125371 ENSDART00000123257	mknk1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAP kinase interacting serine/threonine kinase 1
chr3_+_39579393 Show fit	0.01	ENSDART00000055170	cln3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ceroid-lipofuscinosis, neuronal 3
chr9_-_23147026 Show fit	0.01	ENSDART00000167266	lypd6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LY6/PLAUR domain containing 6B
chr15_-_43327911 Show fit	0.01	ENSDART00000077386	prss16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protease, serine, 16 (thymus)
chr4_+_6833583 Show fit	0.01	ENSDART00000165179 ENSDART00000186134 ENSDART00000174507	dock4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dedicator of cytokinesis 4b
chr20_-_3276339 Show fit	0.00	ENSDART00000166831	rps6kc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribosomal protein S6 kinase polypeptide 1
chr21_+_34088110 Show fit	0.00	ENSDART00000145123 ENSDART00000029599 ENSDART00000147519	mtmr1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myotubularin related protein 1b
chr22_+_9522971 Show fit	0.00	ENSDART00000110048	strip1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	striatin interacting protein 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0099548	trans-synaptic signaling by soluble gas(GO:0099543) trans-synaptic signaling by nitric oxide(GO:0099548)
0.0	0.2	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0	0.1	GO:0032515	negative regulation of phosphoprotein phosphatase activity(GO:0032515)
0.0	0.3	GO:0014823	response to activity(GO:0014823)
0.0	0.1	GO:0071881	adenylate cyclase-inhibiting adrenergic receptor signaling pathway(GO:0071881)
0.0	0.1	GO:0045329	carnitine biosynthetic process(GO:0045329)
0.0	0.1	GO:0050848	regulation of calcium-mediated signaling(GO:0050848)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0042583	chromaffin granule(GO:0042583)
0.0	0.1	GO:0005672	transcription factor TFIIA complex(GO:0005672)
0.0	0.1	GO:0008091	spectrin(GO:0008091)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0015129	lactate transmembrane transporter activity(GO:0015129)
0.0	0.1	GO:0043998	H2A histone acetyltransferase activity(GO:0043998)
0.0	0.1	GO:0004865	protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.0	0.2	GO:0015271	outward rectifier potassium channel activity(GO:0015271)
0.0	0.1	GO:0004938	alpha2-adrenergic receptor activity(GO:0004938)
0.0	0.3	GO:0048306	calcium-dependent protein binding(GO:0048306)
0.0	0.3	GO:0051787	misfolded protein binding(GO:0051787)
0.0	0.1	GO:0004977	melanocortin receptor activity(GO:0004977)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters
0.0	0.2	REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY	Genes involved in Post-chaperonin tubulin folding pathway