PRJNA438478: RNAseq of wild type zebrafish germline
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Motif name | Z-value | Associated genes | Profile | Logo |
---|---|---|---|---|
rfx3_rfx2+rfx4 | 15.64 |
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rfx7a+rfx7b | 5.12 |
|
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etv5a+etv5b_elk1_elk4_etv1_elf1_erf+erfl3_gabpa_elk3 | 4.19 |
|
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elf2a+elf2b | 3.53 |
|
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spi1a+spi1b | 3.26 |
|
||
snai1a | 2.91 |
|
||
bhlhe41_tfeb_usf2_tfec_max_mnta+mntb_mitfa+mitfb_mlxipl_usf1_usf1l_mxi1_srebf1 | 2.83 |
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BX548005.1+smarcc2 | 2.72 |
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clocka+clockb+npas2 | 2.72 |
|
||
esrrd+esrrga_esrrb_esrra+esrrgb | 2.49 |
|
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fosaa+fosab+fosl1a | 2.48 |
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foxd3 | 2.45 |
|
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sox19a+sox2 | 2.32 |
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arntl1a+arntl1b | 2.24 |
|
||
sp1 | 2.23 |
|
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rfx1a+rfx1b | 2.17 |
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tbr1b_tbx16+tbx16l+tbx2a+tbx2b | 2.11 |
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creb1a+creb1b+crema+cremb | 2.06 |
|
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foxo4 | 2.03 |
|
||
pax2b | 2.00 |
|
||
tfap4 | 1.98 |
|
||
foxp1a+foxp1b+foxp3a_foxg1b_foxp2_foxd1+foxd7_foxo1a+foxo1b | 1.92 |
|
||
fli1b | 1.92 |
|
||
yy1a+yy1b | 1.91 |
|
||
zeb1a+zeb1b | 1.90 |
|
||
wt1a+wt1b | 1.90 |
|
||
nrf1 | 1.88 |
|
||
junba+junbb | 1.86 |
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olig3_olig2+olig4_olig1 | 1.85 |
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||
sox9a+sox9b | 1.78 |
|
||
xbp1 | 1.77 |
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||
tal1 | 1.74 |
|
||
arnt2 | 1.70 |
|
||
fev+fli1a_erg_etv2 | 1.70 |
|
||
hoxb6a+hoxb6b | 1.67 |
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||
atf3+jdp2b | 1.67 |
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||
tfdp1a+tfdp1b | 1.61 |
|
||
mycn | 1.61 |
|
||
rreb1a+rreb1b | 1.60 |
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||
prrx1a+prrx1b | 1.59 |
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||
lhx3+lhx4 | 1.58 |
|
||
myb+mybl1 | 1.57 |
|
||
atf1 | 1.57 |
|
||
znf711 | 1.51 |
|
||
patz1 | 1.49 |
|
||
pou3f2a+pou3f2b+pou3f3a+pou3f3b | 1.48 |
|
||
barx2 | 1.42 |
|
||
foxf1+foxf2a+foxf2b | 1.42 |
|
||
rest | 1.41 |
|
||
foxd2_foxd5 | 1.40 |
|
||
sp8a+sp8b_sp4_rsl1d1+sp3a_klf4 | 1.39 |
|
||
eomesa | 1.39 |
|
||
arid3a+arid3b+arid3c | 1.39 |
|
||
hnf4a+hnf4b | 1.37 |
|
||
nr2e3 | 1.36 |
|
||
gsx2+pnx | 1.35 |
|
||
sp2 | 1.34 |
|
||
klf13+zgc:153115 | 1.33 |
|
||
lef1 | 1.32 |
|
||
pax10+pax6a+pax6b | 1.31 |
|
||
nr2f2 | 1.29 |
|
||
hnf4g | 1.29 |
|
||
tbp | 1.29 |
|
||
mafk | 1.28 |
|
||
tbx5a+tbx5b | 1.28 |
|
||
sox13 | 1.27 |
|
||
irf5 | 1.27 |
|
||
pou2f3 | 1.25 |
|
||
nfatc2a | 1.24 |
|
||
tgif1 | 1.24 |
|
||
foxl1 | 1.24 |
|
||
SPDEF | 1.24 |
|
||
jund_batf | 1.23 |
|
||
sox6 | 1.22 |
|
||
mecp2 | 1.21 |
|
||
e2f2_e2f5 | 1.21 |
|
||
emx2+emx3 | 1.19 |
|
||
VDR+nr1i2_vdrb | 1.18 |
|
||
maza+mazb | 1.18 |
|
||
hoxa11b | 1.17 |
|
||
sox12 | 1.17 |
|
||
barhl1a+barhl1b | 1.16 |
|
||
hnf1ba+hnf1bb | 1.16 |
|
||
vsx1_shox_shox2_uncx4.1_lhx2a | 1.15 |
|
||
pou6f2 | 1.12 |
|
||
ikzf2 | 1.11 |
|
||
scrt1a+scrt1b+scrt2 | 1.09 |
|
||
foxj1a+foxj1b | 1.09 |
|
||
nkx2.3+nkx2.7 | 1.08 |
|
||
rargb_pparab | 1.08 |
|
||
mybl2b | 1.08 |
|
||
ets2 | 1.07 |
|
||
tbxta+tbxtb | 1.07 |
|
||
foxb1b+foxb2 | 1.07 |
|
||
hoxb3a | 1.06 |
|
||
rx3 | 1.06 |
|
||
myog | 1.06 |
|
||
cebpa | 1.05 |
|
||
maff+mafga+mafgb | 1.05 |
|
||
irf4a+irf4b | 1.05 |
|
||
osr1 | 1.05 |
|
||
cux2b | 1.04 |
|
||
nfil3-4+si:dkey-172o19.2 | 1.04 |
|
||
nr5a1a+nr5a2+nr5a5 | 1.04 |
|
||
crx+otx1 | 1.04 |
|
||
znf740b | 1.04 |
|
||
CABZ01090890.1+atf6 | 1.04 |
|
||
ikzf1 | 1.03 |
|
||
lhx2b+lhx9 | 1.03 |
|
||
nkx3-1 | 1.03 |
|
||
foxk1_foxj3 | 1.03 |
|
||
ebf3a-1+si:ch211-51e8.2 | 1.02 |
|
||
gata1b+gata2a | 1.02 |
|
||
foxh1+foxq1a+foxq1b | 1.02 |
|
||
tp53 | 1.02 |
|
||
zbtb47b+znf652 | 1.01 |
|
||
msx1a | 1.01 |
|
||
hmx2_hmx3a | 1.00 |
|
||
rxraa+rxrab+rxrba+rxrgb | 0.99 |
|
||
egr2a+egr2b | 0.99 |
|
||
tcf3a+tcf3b | 0.99 |
|
||
sox5 | 0.96 |
|
||
e2f8 | 0.96 |
|
||
nr2f1b+nr2f5 | 0.95 |
|
||
hoxa9a+hoxa9b | 0.94 |
|
||
nkx2.2b | 0.94 |
|
||
zbtb12.2 | 0.93 |
|
||
tefa+tefb | 0.93 |
|
||
myca+mych | 0.92 |
|
||
phf21ab+rfx5 | 0.92 |
|
||
figla | 0.92 |
|
||
nr2e1 | 0.90 |
|
||
thraa+thrab | 0.90 |
|
||
hoxa4a+hoxc3a | 0.89 |
|
||
atf2+atf7a+atf7b_creb5a+creb5b | 0.88 |
|
||
hoxc8a | 0.87 |
|
||
znf384l | 0.87 |
|
||
ctcf | 0.87 |
|
||
cdx1a+cdx1b | 0.87 |
|
||
pou2f2a | 0.87 |
|
||
tfap2a+tfap2c | 0.85 |
|
||
mafb+mafba+nrl | 0.85 |
|
||
fosb+fosl2+si:ch211-153j24.3 | 0.85 |
|
||
myf6 | 0.85 |
|
||
tbx15_tbx1_mgaa_tbx4 | 0.84 |
|
||
lmx1a | 0.83 |
|
||
sp3b | 0.83 |
|
||
runx2a+runx2b | 0.83 |
|
||
mef2d | 0.82 |
|
||
hoxc6a+hoxc6b | 0.82 |
|
||
otx5 | 0.82 |
|
||
si:dkey-149i17.7_zic1 | 0.82 |
|
||
irf10+irf8+irf9 | 0.82 |
|
||
pknox2 | 0.82 |
|
||
tfcp2+tfcp2l1+ubp1 | 0.82 |
|
||
gfi1b | 0.81 |
|
||
irf1b+irf2+irf2a | 0.81 |
|
||
gbx2 | 0.81 |
|
||
gfi1aa+gfi1ab | 0.81 |
|
||
etv7 | 0.81 |
|
||
pax3a+pax3b | 0.80 |
|
||
arxa | 0.80 |
|
||
sox11a+sox11b | 0.80 |
|
||
en1b_en2a+en2b_gbx1_emx1 | 0.78 |
|
||
raraa+rarab | 0.78 |
|
||
ddx28+nfatc1+nfatc2b+nfatc3a+nfatc3b+nfatc4 | 0.78 |
|
||
msx2b | 0.78 |
|
||
foxc1a+foxc1b | 0.78 |
|
||
tcf12 | 0.78 |
|
||
ebf1b | 0.78 |
|
||
nkx6.1 | 0.77 |
|
||
mnx1+mnx2a+mnx2b | 0.76 |
|
||
mef2ca+mef2cb | 0.75 |
|
||
six3a+six3b+six7_six1a+six2a+six2b+six5+six9_six1b | 0.75 |
|
||
smad2_smad10a+smad4a_smad1 | 0.75 |
|
||
hoxb8a+hoxb8b | 0.74 |
|
||
foxj2 | 0.74 |
|
||
vox | 0.73 |
|
||
dbpa+dbpb+hlfa | 0.73 |
|
||
gata3 | 0.73 |
|
||
six4a+six4b | 0.73 |
|
||
creb3l1 | 0.73 |
|
||
onecut2 | 0.72 |
|
||
hoxc13a | 0.72 |
|
||
neurod1 | 0.72 |
|
||
msx1b+msx3 | 0.71 |
|
||
TCF4_id4_mespaa+mespab+mespba+mespbb | 0.71 |
|
||
hoxc11a | 0.71 |
|
||
rarga | 0.71 |
|
||
hoxa5a | 0.71 |
|
||
arnt | 0.71 |
|
||
nfkb1_rela | 0.70 |
|
||
barx1 | 0.70 |
|
||
tfap2e | 0.69 |
|
||
CABZ01087224.1+hlfb | 0.69 |
|
||
hoxa10b | 0.69 |
|
||
meis2a+meis2b_FO834857.1_pknox1.1+pknox1.2 | 0.69 |
|
||
hoxc13b+hoxd13a | 0.68 |
|
||
e4f1+si:dkeyp-79b7.12 | 0.68 |
|
||
pbx1a+pbx1b+pbx2+pbx3a+pbx3b | 0.68 |
|
||
meis1a+meis1b | 0.68 |
|
||
stat1a+stat2-1_stat1b | 0.67 |
|
||
six6a+six6b | 0.67 |
|
||
rbpjb | 0.67 |
|
||
nr2c2 | 0.67 |
|
||
atf5a+atf5b | 0.66 |
|
||
hey2_hey1+heyl | 0.66 |
|
||
sox14+sox14-1+sox21a | 0.66 |
|
||
nr6a1a | 0.66 |
|
||
lhx8a+lhx8b | 0.66 |
|
||
sox19b+sox3 | 0.66 |
|
||
foxa_foxa1_foxa2 | 0.65 |
|
||
grhl1 | 0.65 |
|
||
AL807792.3+atoh1a+atoh1b+atoh1c+bloc1s2 | 0.65 |
|
||
meox1 | 0.65 |
|
||
pou1f1 | 0.65 |
|
||
tcf7l1a+tcf7l1b+tcf7l2 | 0.64 |
|
||
lhx6 | 0.64 |
|
||
hoxa13a+hoxa13b | 0.64 |
|
||
sox10 | 0.64 |
|
||
bach1a+bach1b+bach2a+bach2b | 0.64 |
|
||
smad3a+smad3b | 0.63 |
|
||
hdx | 0.63 |
|
||
bsx | 0.63 |
|
||
hbp1 | 0.63 |
|
||
hnf1a | 0.63 |
|
||
stat5a+stat5b | 0.62 |
|
||
cdc5l | 0.61 |
|
||
gsc | 0.61 |
|
||
hoxc5a | 0.60 |
|
||
pax2a+pax5 | 0.60 |
|
||
CR354582.1 | 0.60 |
|
||
stat4 | 0.60 |
|
||
gcm2 | 0.60 |
|
||
irx5a+irx5b_irx3a+irx3b | 0.60 |
|
||
znf410 | 0.60 |
|
||
prox1a+prox2+prox3 | 0.60 |
|
||
atf4a+atf4b | 0.59 |
|
||
lhx6-1 | 0.59 |
|
||
cebpd | 0.59 |
|
||
pitx2 | 0.59 |
|
||
srebf2 | 0.59 |
|
||
sox18 | 0.58 |
|
||
zfhx3+zfhx3a+zfhx4 | 0.58 |
|
||
nkx3.3-1 | 0.58 |
|
||
nr2f1a | 0.58 |
|
||
ehf | 0.58 |
|
||
snai1b+snai3 | 0.58 |
|
||
lhx1a+lhx1b | 0.57 |
|
||
sox4a+sox4b | 0.57 |
|
||
foxb1a | 0.56 |
|
||
arid5b | 0.56 |
|
||
mixl1+mxtx1+sebox | 0.56 |
|
||
tbx20 | 0.56 |
|
||
runx1 | 0.56 |
|
||
mycb | 0.55 |
|
||
hoxd11a | 0.54 |
|
||
pax7a+pax7b+prop1 | 0.54 |
|
||
isl2a+isl2b | 0.54 |
|
||
tbx3a+tbx3b | 0.53 |
|
||
rbpja | 0.53 |
|
||
si:dkey-18a10.3 | 0.53 |
|
||
zbtb3 | 0.53 |
|
||
hoxb2a | 0.53 |
|
||
irf1a | 0.52 |
|
||
hoxd9a | 0.52 |
|
||
pgr | 0.52 |
|
||
dlx2a+dlx2b_dlx4a+dlx4b+dlx6a | 0.52 |
|
||
bcl11aa | 0.52 |
|
||
sox17 | 0.52 |
|
||
hmga1a | 0.52 |
|
||
foxa3 | 0.51 |
|
||
bhlhe40 | 0.51 |
|
||
irx6a | 0.51 |
|
||
evx2 | 0.51 |
|
||
pparaa+pparda+ppardb | 0.51 |
|
||
lmx1ba+lmx1bb_lmx1al | 0.51 |
|
||
zbtb7a+zbtb7c | 0.50 |
|
||
nr2f6a+nr2f6b | 0.50 |
|
||
nfia | 0.50 |
|
||
tfe3a+tfe3b | 0.49 |
|
||
gsx1 | 0.49 |
|
||
fosl2l | 0.49 |
|
||
hmx4 | 0.49 |
|
||
gli1+gli2b | 0.49 |
|
||
e2f3 | 0.48 |
|
||
mecom | 0.48 |
|
||
hoxd12a | 0.48 |
|
||
msx2a | 0.48 |
|
||
egr1 | 0.48 |
|
||
insm1a+insm1b | 0.48 |
|
||
msc | 0.48 |
|
||
mafa+mafbb | 0.47 |
|
||
meox2b | 0.47 |
|
||
onecut3a+onecut3b | 0.47 |
|
||
vax2 | 0.47 |
|
||
hoxc11b | 0.47 |
|
||
tp63 | 0.47 |
|
||
nfixa+nfixb | 0.47 |
|
||
pou4f3_pou4f1+pou4f4 | 0.46 |
|
||
klf3+klf8 | 0.46 |
|
||
rxrbb | 0.46 |
|
||
foxo3b+foxo6a+foxo6b | 0.46 |
|
||
otx2b | 0.46 |
|
||
spi2+spic | 0.46 |
|
||
klf12a | 0.46 |
|
||
elf3 | 0.45 |
|
||
prdm1a | 0.45 |
|
||
hoxa1a+hoxb1b-1+hoxc1a | 0.45 |
|
||
zbtb18+zbtb42 | 0.45 |
|
||
jdp2a | 0.45 |
|
||
pou6f1 | 0.45 |
|
||
nr3c1_ar | 0.45 |
|
||
arid5a+arid6 | 0.44 |
|
||
pou5f3 | 0.44 |
|
||
e2f4 | 0.44 |
|
||
tlx1 | 0.44 |
|
||
tp73 | 0.44 |
|
||
mbd2 | 0.43 |
|
||
klf15+si:ch211-117k10.3 | 0.43 |
|
||
cebpb | 0.43 |
|
||
foxn1 | 0.43 |
|
||
gmeb2 | 0.43 |
|
||
alx4a+alx4b | 0.42 |
|
||
hoxc12a+hoxc12b | 0.42 |
|
||
foxm1 | 0.42 |
|
||
lhx5 | 0.42 |
|
||
smarcc1a+smarcc1b | 0.42 |
|
||
snai2 | 0.41 |
|
||
foxo3a | 0.41 |
|
||
dlx3b | 0.41 |
|
||
nr4a2b | 0.41 |
|
||
runx3 | 0.41 |
|
||
nr2c1 | 0.41 |
|
||
hic1l+hic2 | 0.41 |
|
||
zbtb14 | 0.40 |
|
||
jun | 0.40 |
|
||
nr1h4 | 0.40 |
|
||
meox2a | 0.40 |
|
||
batf2+batf3 | 0.40 |
|
||
hmbox1a+zgc:91944 | 0.40 |
|
||
onecut1+onecutl | 0.40 |
|
||
barhl2 | 0.39 |
|
||
nr4a3 | 0.39 |
|
||
hoxa11a | 0.39 |
|
||
meis3 | 0.39 |
|
||
hoxd4a | 0.39 |
|
||
creb3l2 | 0.38 |
|
||
CT027745.1+tbx19 | 0.38 |
|
||
ebf3a-2+ebf3b | 0.38 |
|
||
esr1+esr2a+esr2b | 0.38 |
|
||
nkx1.2la | 0.38 |
|
||
irx2a | 0.38 |
|
||
hoxc4a | 0.38 |
|
||
vsx2 | 0.37 |
|
||
CABZ01066694.1 | 0.37 |
|
||
alx1 | 0.37 |
|
||
her6+her9 | 0.37 |
|
||
noto+vax1 | 0.37 |
|
||
prdm14 | 0.36 |
|
||
e2f1_e2f7 | 0.36 |
|
||
ptf1a+si:dkey-34f9.3 | 0.36 |
|
||
irf6 | 0.36 |
|
||
tcf21 | 0.36 |
|
||
nr4a2a | 0.36 |
|
||
nkx1.2lb | 0.36 |
|
||
isl1+isl1l | 0.36 |
|
||
nkx2.5 | 0.36 |
|
||
klf12b | 0.35 |
|
||
mtf1 | 0.35 |
|
||
hoxb9a | 0.35 |
|
||
egr3 | 0.35 |
|
||
foxi1+foxi2+foxi3a+foxi3b | 0.35 |
|
||
foxg1a+foxg1c+foxg1d | 0.34 |
|
||
hivep1 | 0.34 |
|
||
pdx1_pbx4 | 0.34 |
|
||
dharma | 0.34 |
|
||
pax8 | 0.34 |
|
||
znf143b | 0.34 |
|
||
mef2aa+mef2ab | 0.33 |
|
||
drgx_arxb | 0.33 |
|
||
myod1 | 0.33 |
|
||
rcor1+rcor2+rcor3 | 0.32 |
|
||
ybx1 | 0.32 |
|
||
nkx2.4a+nkx2.4b | 0.32 |
|
||
srfa+srfb | 0.31 |
|
||
hoxa2b | 0.31 |
|
||
zic2a+zic2b | 0.31 |
|
||
hinfp | 0.31 |
|
||
glis2a+glis2b | 0.31 |
|
||
nfe2l1b+nfe2l2b | 0.31 |
|
||
gmeb1 | 0.30 |
|
||
en1a | 0.30 |
|
||
hoxb13a | 0.30 |
|
||
tcf7 | 0.30 |
|
||
znf148 | 0.29 |
|
||
egr4 | 0.29 |
|
||
zgc:101100 | 0.29 |
|
||
gli2a+gli3 | 0.29 |
|
||
nkx3-2+nkx3.3-2 | 0.29 |
|
||
hoxb4a | 0.29 |
|
||
twist1a+twist1b+twist3 | 0.29 |
|
||
sox7 | 0.29 |
|
||
hlx1 | 0.29 |
|
||
zic4+zic6 | 0.28 |
|
||
pou4f2 | 0.28 |
|
||
nr1d2a | 0.28 |
|
||
klf5l+klf6a+klf6b | 0.28 |
|
||
dlx1a | 0.28 |
|
||
bcl6aa+bcl6ab+bcl6b | 0.28 |
|
||
roraa+rorab | 0.28 |
|
||
irx1b+irx4a+irx4b | 0.28 |
|
||
pou2f1b | 0.28 |
|
||
rx1+rx2 | 0.28 |
|
||
hic1 | 0.27 |
|
||
pitx1+pitx3 | 0.27 |
|
||
pou3f1 | 0.27 |
|
||
mta3 | 0.27 |
|
||
si:dkey-43p13.5+uncx | 0.26 |
|
||
hoxd10a | 0.26 |
|
||
cebpg | 0.26 |
|
||
sox8a+sox8b | 0.26 |
|
||
hoxb7a | 0.26 |
|
||
hoxb10a+hoxc10a | 0.25 |
|
||
nkx6.3 | 0.25 |
|
||
mafaa | 0.25 |
|
||
stat3 | 0.25 |
|
||
eve1+evx1 | 0.24 |
|
||
hoxd3a | 0.24 |
|
||
hmx1+hmx3b | 0.24 |
|
||
plag1+plagx | 0.24 |
|
||
nkx2.2a | 0.24 |
|
||
rorc | 0.23 |
|
||
cxxc1a+cxxc1b+mbd1a | 0.23 |
|
||
rel | 0.23 |
|
||
nr3c2 | 0.23 |
|
||
tfap2b | 0.23 |
|
||
phox2bb | 0.22 |
|
||
nkx2.1 | 0.22 |
|
||
zbtb49 | 0.22 |
|
||
pax1a+pax1b_pax9 | 0.22 |
|
||
dlx5a | 0.22 |
|
||
osr2 | 0.22 |
|
||
zbtb16a+zbtb16b | 0.21 |
|
||
zbtb7b | 0.21 |
|
||
prdm4 | 0.21 |
|
||
glis3 | 0.21 |
|
||
tfap2d | 0.21 |
|
||
hoxc9a | 0.20 |
|
||
nfat5a+nfat5b | 0.20 |
|
||
phox2ba | 0.20 |
|
||
nfil3-5 | 0.19 |
|
||
nfe2l2a | 0.19 |
|
||
sox21b | 0.19 |
|
||
nr6a1b | 0.18 |
|
||
nr4a1 | 0.18 |
|
||
gata1a+gata2b | 0.18 |
|
||
her1+her11+her5_her12+her15.1+her15.2+her2+her4.1+her4.2+her4.3+her4.4 | 0.17 |
|
||
thrb | 0.17 |
|
||
glis1a+glis1b | 0.17 |
|
||
zic3 | 0.17 |
|
||
bbx | 0.17 |
|
||
bhlha15_bhlhe23+si:ch211-196c10.13_bhlhe22 | 0.16 |
|
||
nfe2 | 0.16 |
|
||
sox1a+sox1b | 0.15 |
|
||
phox2a | 0.15 |
|
||
dmbx1a+dmbx1b | 0.14 |
|
||
mef2b | 0.13 |
|
||
klf7a+klf7b | 0.12 |
|
||
hoxb1a+hoxb1b-2 | 0.11 |
|
||
CABZ01093502.2 | 0.11 |
|
||
cux1a | 0.09 |
|
||
nfic | 0.09 |
|
||
otpa+otpb | 0.09 |
|
||
hoxb5a+hoxb5b | 0.08 |
|
Sample name | Condition | Replicate/Batch |
---|---|---|
oocyte1_rep1 | ||
oocyte1_rep2 | ||
oocyte2_rep1 | ||
oocyte2_rep2 | ||
oocyte3_rep1 | ||
oocyte3_rep2 | ||
ovary1_rep1 | ||
ovary1_rep2 | ||
ovary2_rep1 | ||
ovary2_rep2 | ||
ovary3_rep1 | ||
ovary3_rep2 | ||
testis1_rep1 | ||
testis1_rep2 | ||
testis2_rep1 | ||
testis2_rep2 | ||
testis3_rep1 | ||
testis3_rep2 |