GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Pitx3 Links NCBI RGD Ensembl	ENSRNOG00000019194	paired-like homeodomain 3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Pitx3	rn6_v1_chr1_-_265899958_265899958	-0.66	2.2e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_124005280 Show fit	0.51	ENSRNOT00000014353	Nr2c2 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 2, group C, member 2
chr4_+_86275717 Show fit	0.46	ENSRNOT00000016414	Ppp1r17 Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 17
chr12_-_48365784 Show fit	0.31	ENSRNOT00000077317	Dao Links NCBI RGD Ensembl Show fit	D-amino-acid oxidase
chr7_+_141666111 Show fit	0.27	ENSRNOT00000083250	AABR07058886.1 Links NCBI RGD Ensembl Show fit
chr20_+_5080070 Show fit	0.24	ENSRNOT00000086950 ENSRNOT00000077082	Abhd16a Links NCBI RGD Ensembl Show fit	abhydrolase domain containing 16A
chr3_-_176926722 Show fit	0.18	ENSRNOT00000020168	Zbtb46 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 46
chr3_-_113438801 Show fit	0.18	ENSRNOT00000091665	Mfap1a Links NCBI RGD Ensembl Show fit	microfibrillar-associated protein 1A
chr1_-_66212418 Show fit	0.17	ENSRNOT00000026074	LOC691722 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC691722
chr8_-_61919874 Show fit	0.17	ENSRNOT00000064830	RGD1305464 Links NCBI RGD Ensembl Show fit	similar to human chromosome 15 open reading frame 39
chr10_-_62184874 Show fit	0.15	ENSRNOT00000004229	Rpa1 Links NCBI RGD Ensembl Show fit	replication protein A1
chr3_-_80012750 Show fit	0.15	ENSRNOT00000018154	Nr1h3 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 1, group H, member 3
chr20_-_13657943 Show fit	0.15	ENSRNOT00000032290	Vpreb3 Links NCBI RGD Ensembl Show fit	pre-B lymphocyte 3
chr3_-_138683318 Show fit	0.14	ENSRNOT00000029701	Dzank1 Links NCBI RGD Ensembl Show fit	double zinc ribbon and ankyrin repeat domains 1
chr15_-_23606634 Show fit	0.14	ENSRNOT00000075602	Gmfb Links NCBI RGD Ensembl Show fit	glia maturation factor, beta
chr3_+_145764932 Show fit	0.14	ENSRNOT00000075257	AABR07054264.1 Links NCBI RGD Ensembl Show fit
chr1_-_255815733 Show fit	0.14	ENSRNOT00000047387	Cpeb3 Links NCBI RGD Ensembl Show fit	cytoplasmic polyadenylation element binding protein 3
chrX_+_71528988 Show fit	0.14	ENSRNOT00000075963	Ogt Links NCBI RGD Ensembl Show fit	O-linked N-acetylglucosamine (GlcNAc) transferase
chr7_-_12762341 Show fit	0.14	ENSRNOT00000064886	Abca7 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily A member 7
chr10_-_92476109 Show fit	0.14	ENSRNOT00000089029	Kansl1 Links NCBI RGD Ensembl Show fit	KAT8 regulatory NSL complex subunit 1
chr12_+_37878653 Show fit	0.13	ENSRNOT00000091084	Pitpnm2 Links NCBI RGD Ensembl Show fit	phosphatidylinositol transfer protein, membrane-associated 2
chr4_+_180062799 Show fit	0.13	ENSRNOT00000021623	Rassf8 Links NCBI RGD Ensembl Show fit	Ras association domain family member 8
chr9_-_17209220 Show fit	0.13	ENSRNOT00000083764	Gtpbp2 Links NCBI RGD Ensembl Show fit	GTP binding protein 2
chr1_-_197568165 Show fit	0.13	ENSRNOT00000079044	Xpo6 Links NCBI RGD Ensembl Show fit	exportin 6
chr20_-_3386048 Show fit	0.13	ENSRNOT00000089550 ENSRNOT00000065025	Dhx16 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 16
chr5_+_155934490 Show fit	0.13	ENSRNOT00000077933	LOC100911993 Links NCBI RGD Ensembl Show fit	ubiquitin carboxyl-terminal hydrolase 48-like
chr3_-_125213607 Show fit	0.12	ENSRNOT00000078070	Gpcpd1 Links NCBI RGD Ensembl Show fit	glycerophosphocholine phosphodiesterase 1
chr1_+_214016897 Show fit	0.12	ENSRNOT00000075588	LOC100911766 Links NCBI RGD Ensembl Show fit	tetraspanin-4-like
chr3_+_177040707 Show fit	0.12	ENSRNOT00000086046	Dnajc5 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C5
chr19_-_56789404 Show fit	0.12	ENSRNOT00000058652	RGD1563991 Links NCBI RGD Ensembl Show fit	similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
chr19_+_52664322 Show fit	0.12	ENSRNOT00000082754	Crispld2 Links NCBI RGD Ensembl Show fit	cysteine-rich secretory protein LCCL domain containing 2
chr7_-_120077612 Show fit	0.12	ENSRNOT00000011750	Lgals2 Links NCBI RGD Ensembl Show fit	galectin 2
chr20_-_27301952 Show fit	0.12	ENSRNOT00000000438	Slc25a16 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 16
chr3_+_60024013 Show fit	0.11	ENSRNOT00000025255	Scrn3 Links NCBI RGD Ensembl Show fit	secernin 3
chr10_+_3338808 Show fit	0.11	ENSRNOT00000004384 ENSRNOT00000093444	Mpv17l Links NCBI RGD Ensembl Show fit	MPV17 mitochondrial inner membrane protein like
chr7_-_130151414 Show fit	0.11	ENSRNOT00000010467	Plxnb2 Links NCBI RGD Ensembl Show fit	plexin B2
chr10_-_109604899 Show fit	0.11	ENSRNOT00000080188	Nploc4 Links NCBI RGD Ensembl Show fit	NPL4 homolog, ubiquitin recognition factor
chr6_+_26566494 Show fit	0.11	ENSRNOT00000079292	Gtf3c2 Links NCBI RGD Ensembl Show fit	general transcription factor IIIC subunit 2
chr5_+_173256834 Show fit	0.11	ENSRNOT00000089936	Ccnl2 Links NCBI RGD Ensembl Show fit	cyclin L2
chr17_-_32015071 Show fit	0.11	ENSRNOT00000070876	LOC100911107 Links NCBI RGD Ensembl Show fit	leukocyte elastase inhibitor A-like
chr1_+_214005791 Show fit	0.10	ENSRNOT00000071831	LOC100911692 Links NCBI RGD Ensembl Show fit	EF-hand calcium-binding domain-containing protein 4A-like
chr14_+_84876781 Show fit	0.10	ENSRNOT00000065188	Ascc2 Links NCBI RGD Ensembl Show fit	activating signal cointegrator 1 complex subunit 2
chr1_+_90919076 Show fit	0.10	ENSRNOT00000081362	LOC108348197 Links NCBI RGD Ensembl Show fit	calpain small subunit 1-like
chr8_+_114876146 Show fit	0.10	ENSRNOT00000075966	Wdr82 Links NCBI RGD Ensembl Show fit	WD repeat domain 82
chr4_-_6978073 Show fit	0.10	ENSRNOT00000045311	Nub1 Links NCBI RGD Ensembl Show fit	negative regulator of ubiquitin-like proteins 1
chr9_-_121931564 Show fit	0.10	ENSRNOT00000056243	Tyms Links NCBI RGD Ensembl Show fit	thymidylate synthetase
chr6_-_28994519 Show fit	0.10	ENSRNOT00000006668	Ubxn2a Links NCBI RGD Ensembl Show fit	UBX domain protein 2A
chrX_+_71174699 Show fit	0.10	ENSRNOT00000076957 ENSRNOT00000090192 ENSRNOT00000040334	Med12 Links NCBI RGD Ensembl Show fit	mediator complex subunit 12
chr3_-_176197753 Show fit	0.10	ENSRNOT00000013189	Dido1 Links NCBI RGD Ensembl Show fit	death inducer-obliterator 1
chr19_-_37528011 Show fit	0.09	ENSRNOT00000059628	Agrp Links NCBI RGD Ensembl Show fit	agouti related neuropeptide
chr13_+_50196042 Show fit	0.09	ENSRNOT00000090858	Zc3h11a Links NCBI RGD Ensembl Show fit	zinc finger CCCH-type containing 11A
chr19_+_42110327 Show fit	0.09	ENSRNOT00000019810	Dhx38 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 38
chr1_+_84411726 Show fit	0.09	ENSRNOT00000025303	Akt2 Links NCBI RGD Ensembl Show fit	AKT serine/threonine kinase 2
chr2_-_211690716 Show fit	0.09	ENSRNOT00000027690	Fndc7 Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 7
chr2_+_93656946 Show fit	0.09	ENSRNOT00000013905	Zfand1 Links NCBI RGD Ensembl Show fit	zinc finger AN1-type containing 1
chr10_+_48240127 Show fit	0.09	ENSRNOT00000080682	Specc1 Links NCBI RGD Ensembl Show fit	sperm antigen with calponin homology and coiled-coil domains 1
chr7_-_130151880 Show fit	0.09	ENSRNOT00000088623	Plxnb2 Links NCBI RGD Ensembl Show fit	plexin B2
chr10_-_109979712 Show fit	0.09	ENSRNOT00000086042	Dus1l Links NCBI RGD Ensembl Show fit	dihydrouridine synthase 1-like
chr10_-_12916784 Show fit	0.09	ENSRNOT00000004589	Zfp13 Links NCBI RGD Ensembl Show fit	zinc finger protein 13
chr17_-_44643362 Show fit	0.09	ENSRNOT00000091041	Zfp184 Links NCBI RGD Ensembl Show fit	zinc finger protein 184
chr10_-_55589978 Show fit	0.09	ENSRNOT00000007087	LOC100912917 Links NCBI RGD Ensembl Show fit	phosphoribosylformylglycinamidine synthase-like
chr10_-_88389347 Show fit	0.09	ENSRNOT00000022695	Klhl11 Links NCBI RGD Ensembl Show fit	kelch-like family member 11
chr5_+_173256637 Show fit	0.09	ENSRNOT00000025531	Ccnl2 Links NCBI RGD Ensembl Show fit	cyclin L2
chr4_-_151428894 Show fit	0.09	ENSRNOT00000010556	Adipor2 Links NCBI RGD Ensembl Show fit	adiponectin receptor 2
chr12_+_37709860 Show fit	0.08	ENSRNOT00000086244	Mphosph9 Links NCBI RGD Ensembl Show fit	M-phase phosphoprotein 9
chr15_+_61692116 Show fit	0.08	ENSRNOT00000071455	Kbtbd6 Links NCBI RGD Ensembl Show fit	kelch repeat and BTB domain containing 6
chr16_-_19583386 Show fit	0.08	ENSRNOT00000090131	Zfp617 Links NCBI RGD Ensembl Show fit	zinc finger protein 617
chr6_-_10891146 Show fit	0.08	ENSRNOT00000020328	Mcfd2 Links NCBI RGD Ensembl Show fit	multiple coagulation factor deficiency 2
chr10_+_103206014 Show fit	0.08	ENSRNOT00000004081	Ttyh2 Links NCBI RGD Ensembl Show fit	tweety family member 2
chr11_-_72814850 Show fit	0.08	ENSRNOT00000091575	LOC100911374 Links NCBI RGD Ensembl Show fit	UBX domain-containing protein 7-like
chr14_-_114649173 Show fit	0.08	ENSRNOT00000083528	Sptbn1 Links NCBI RGD Ensembl Show fit	spectrin, beta, non-erythrocytic 1
chr11_-_71135493 Show fit	0.08	ENSRNOT00000050535	Fyttd1 Links NCBI RGD Ensembl Show fit	forty-two-three domain containing 1
chr5_+_152613255 Show fit	0.08	ENSRNOT00000037097	Pafah2 Links NCBI RGD Ensembl Show fit	platelet-activating factor acetylhydrolase 2
chr10_-_37215899 Show fit	0.08	ENSRNOT00000006356	Sec24a Links NCBI RGD Ensembl Show fit	SEC24 homolog A, COPII coat complex component
chr3_-_153042395 Show fit	0.08	ENSRNOT00000055232	Ndrg3 Links NCBI RGD Ensembl Show fit	NDRG family member 3
chr8_-_13909061 Show fit	0.08	ENSRNOT00000078372 ENSRNOT00000083011	Cep295 Links NCBI RGD Ensembl Show fit	centrosomal protein 295
chr3_+_176821652 Show fit	0.07	ENSRNOT00000055030	Rtel1 Links NCBI RGD Ensembl Show fit	regulator of telomere elongation helicase 1
chr5_-_137321121 Show fit	0.07	ENSRNOT00000027414	Tie1 Links NCBI RGD Ensembl Show fit	tyrosine kinase with immunoglobulin-like and EGF-like domains 1
chr8_+_50139997 Show fit	0.07	ENSRNOT00000022796	Bace1 Links NCBI RGD Ensembl Show fit	beta-secretase 1
chr6_+_7793735 Show fit	0.07	ENSRNOT00000090724 ENSRNOT00000006832	Plekhh2 Links NCBI RGD Ensembl Show fit	pleckstrin homology, MyTH4 and FERM domain containing H2
chr2_+_118929738 Show fit	0.07	ENSRNOT00000065144	Mfn1 Links NCBI RGD Ensembl Show fit	mitofusin 1
chr3_-_119405453 Show fit	0.07	ENSRNOT00000090355	Sppl2a Links NCBI RGD Ensembl Show fit	signal peptide peptidase-like 2A
chr3_-_110556808 Show fit	0.07	ENSRNOT00000092158 ENSRNOT00000045362	RGD1565536 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein
chr9_-_10369937 Show fit	0.07	ENSRNOT00000071228 ENSRNOT00000072911 ENSRNOT00000072009	Ranbp3 Links NCBI RGD Ensembl Show fit	RAN binding protein 3
chr1_-_261140389 Show fit	0.07	ENSRNOT00000073193	Rrp12 Links NCBI RGD Ensembl Show fit	ribosomal RNA processing 12 homolog
chr14_+_84447885 Show fit	0.07	ENSRNOT00000009150	Gatsl3 Links NCBI RGD Ensembl Show fit	GATS protein-like 3
chr7_-_10500392 Show fit	0.06	ENSRNOT00000043099	LOC100909526 Links NCBI RGD Ensembl Show fit	zinc finger protein 709-like
chr14_+_16924960 Show fit	0.06	ENSRNOT00000003009	Ccdc158 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 158
chr7_+_117445144 Show fit	0.06	ENSRNOT00000081632	Mroh1 Links NCBI RGD Ensembl Show fit	maestro heat-like repeat family member 1
chr10_+_46818525 Show fit	0.06	ENSRNOT00000088120	Drg2 Links NCBI RGD Ensembl Show fit	developmentally regulated GTP binding protein 2
chr10_+_45193989 Show fit	0.06	ENSRNOT00000061005	LOC102555635 Links NCBI RGD Ensembl Show fit	zinc finger protein 39-like
chr6_+_111076351 Show fit	0.06	ENSRNOT00000089644	Tmem63c Links NCBI RGD Ensembl Show fit	transmembrane protein 63c
chr6_-_126710854 Show fit	0.06	ENSRNOT00000081127 ENSRNOT00000064914	Btbd7 Links NCBI RGD Ensembl Show fit	BTB domain containing 7
chr7_-_10896447 Show fit	0.06	ENSRNOT00000031481	LOC100125368 Links NCBI RGD Ensembl Show fit	zinc finger protein LOC100125368
chr10_+_83104622 Show fit	0.06	ENSRNOT00000072972	AABR07030375.2 Links NCBI RGD Ensembl Show fit
chr2_+_122368265 Show fit	0.06	ENSRNOT00000078321	Atp11b Links NCBI RGD Ensembl Show fit	ATPase phospholipid transporting 11B (putative)
chr1_+_257747175 Show fit	0.06	ENSRNOT00000072116	AABR07006775.1 Links NCBI RGD Ensembl Show fit
chr1_+_215666628 Show fit	0.06	ENSRNOT00000040598 ENSRNOT00000066135 ENSRNOT00000051425 ENSRNOT00000080339 ENSRNOT00000066896 ENSRNOT00000063918	Tnnt3 Links NCBI RGD Ensembl Show fit	troponin T3, fast skeletal type
chr4_+_57378069 Show fit	0.06	ENSRNOT00000080173 ENSRNOT00000011851	Nrf1 Links NCBI RGD Ensembl Show fit	nuclear respiratory factor 1
chr11_-_68197772 Show fit	0.06	ENSRNOT00000003060 ENSRNOT00000081875	Hspbap1 Links NCBI RGD Ensembl Show fit	Hspb associated protein 1
chr12_-_18120476 Show fit	0.06	ENSRNOT00000080364	RGD1566386 Links NCBI RGD Ensembl Show fit	similar to Hypothetical protein A430033K04
chr3_-_64766472 Show fit	0.06	ENSRNOT00000037684	Cwc22 Links NCBI RGD Ensembl Show fit	CWC22 spliceosome associated protein homolog
chr15_-_46381967 Show fit	0.06	ENSRNOT00000014198	Neil2 Links NCBI RGD Ensembl Show fit	nei-like DNA glycosylase 2
chr3_-_123171875 Show fit	0.06	ENSRNOT00000028834	Ubox5 Links NCBI RGD Ensembl Show fit	U-box domain containing 5
chr16_+_71242470 Show fit	0.06	ENSRNOT00000030489	Letm2 Links NCBI RGD Ensembl Show fit	leucine zipper and EF-hand containing transmembrane protein 2
chr7_+_120067379 Show fit	0.06	ENSRNOT00000011270	Cdc42ep1 Links NCBI RGD Ensembl Show fit	CDC42 effector protein 1
chr4_+_179481263 Show fit	0.06	ENSRNOT00000021284	Etfrf1 Links NCBI RGD Ensembl Show fit	electron transfer flavoprotein regulatory factor 1
chr18_+_63098144 Show fit	0.05	ENSRNOT00000024968	Cidea Links NCBI RGD Ensembl Show fit	cell death-inducing DFFA-like effector a
chr8_+_103459161 Show fit	0.05	ENSRNOT00000074047	PCOLCE2 Links NCBI RGD Ensembl Show fit	procollagen C-endopeptidase enhancer 2
chr8_-_21453190 Show fit	0.05	ENSRNOT00000078192	Zfp26 Links NCBI RGD Ensembl Show fit	zinc finger protein 26
chr1_-_282498880 Show fit	0.05	ENSRNOT00000047645	AABR07007130.2 Links NCBI RGD Ensembl Show fit
chr1_+_177183209 Show fit	0.05	ENSRNOT00000085326	Micalcl Links NCBI RGD Ensembl Show fit	MICAL C-terminal like
chr20_-_27308069 Show fit	0.05	ENSRNOT00000056047	Slc25a16 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 16
chr2_+_125752130 Show fit	0.05	ENSRNOT00000038703	Fat4 Links NCBI RGD Ensembl Show fit	FAT atypical cadherin 4
chr7_+_12840938 Show fit	0.05	ENSRNOT00000039232	Polrmt Links NCBI RGD Ensembl Show fit	RNA polymerase mitochondrial
chr8_-_128754514 Show fit	0.05	ENSRNOT00000025019	Cx3cr1 Links NCBI RGD Ensembl Show fit	C-X3-C motif chemokine receptor 1
chr18_+_69818720 Show fit	0.05	ENSRNOT00000043108	LOC680512 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L38
chr8_-_118187791 Show fit	0.05	ENSRNOT00000048764	Dhx30 Links NCBI RGD Ensembl Show fit	DExH-box helicase 30
chr6_+_80159364 Show fit	0.05	ENSRNOT00000005439	Pnn Links NCBI RGD Ensembl Show fit	pinin, desmosome associated protein
chr20_+_27212724 Show fit	0.05	ENSRNOT00000032600	Hnrnph3 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein H3
chr1_+_87563975 Show fit	0.05	ENSRNOT00000088772	Zfp30 Links NCBI RGD Ensembl Show fit	zinc finger protein 30
chr11_+_72044096 Show fit	0.05	ENSRNOT00000034757	Senp5 Links NCBI RGD Ensembl Show fit	SUMO1/sentrin specific peptidase 5
chr9_+_27554751 Show fit	0.05	ENSRNOT00000077690	AABR07067042.3 Links NCBI RGD Ensembl Show fit
chr8_+_117648745 Show fit	0.05	ENSRNOT00000027762	Slc26a6 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 6
chr9_+_66889028 Show fit	0.05	ENSRNOT00000087194	Carf Links NCBI RGD Ensembl Show fit	calcium responsive transcription factor
chr5_-_150949931 Show fit	0.05	ENSRNOT00000067905	Smpdl3b Links NCBI RGD Ensembl Show fit	sphingomyelin phosphodiesterase, acid-like 3B
chr10_+_57239993 Show fit	0.04	ENSRNOT00000067919	LOC687707 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC687707
chr12_-_19294888 Show fit	0.04	ENSRNOT00000001815	Zfp113 Links NCBI RGD Ensembl Show fit	zinc finger protein 3
chr6_+_6908684 Show fit	0.04	ENSRNOT00000079095	Mta3 Links NCBI RGD Ensembl Show fit	metastasis associated 1 family, member 3
chr1_-_69743616 Show fit	0.04	ENSRNOT00000030259	Zfp772 Links NCBI RGD Ensembl Show fit	zinc finger protein 772
chr10_-_72417070 Show fit	0.04	ENSRNOT00000036814	Usp32 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 32
chr2_+_198231291 Show fit	0.04	ENSRNOT00000078288 ENSRNOT00000046739	Otud7b Links NCBI RGD Ensembl Show fit	OTU deubiquitinase 7B
chr12_-_37411525 Show fit	0.04	ENSRNOT00000087698	Tctn2 Links NCBI RGD Ensembl Show fit	tectonic family member 2
chrX_+_22285184 Show fit	0.04	ENSRNOT00000086262	Iqsec2 Links NCBI RGD Ensembl Show fit	IQ motif and Sec7 domain 2
chr4_-_100783750 Show fit	0.04	ENSRNOT00000078956	Kcmf1 Links NCBI RGD Ensembl Show fit	potassium channel modulatory factor 1
chr6_-_123405246 Show fit	0.04	ENSRNOT00000083665	Foxn3 Links NCBI RGD Ensembl Show fit	forkhead box N3
chr1_+_192379543 Show fit	0.04	ENSRNOT00000078705	Prkcb Links NCBI RGD Ensembl Show fit	protein kinase C, beta
chr10_-_89130339 Show fit	0.04	ENSRNOT00000027640	Ezh1 Links NCBI RGD Ensembl Show fit	enhancer of zeste 1 polycomb repressive complex 2 subunit
chr6_-_23473169 Show fit	0.04	ENSRNOT00000035320	Wdr43 Links NCBI RGD Ensembl Show fit	WD repeat domain 43
chr12_+_37444072 Show fit	0.04	ENSRNOT00000077380 ENSRNOT00000092699 ENSRNOT00000001373 ENSRNOT00000092416	Eif2b1 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2B subunit 1 alpha
chr12_-_16201632 Show fit	0.04	ENSRNOT00000001688	Chst12 Links NCBI RGD Ensembl Show fit	carbohydrate sulfotransferase 12
chr9_+_23420654 Show fit	0.04	ENSRNOT00000073595	LOC688459 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC688459
chr1_+_221735517 Show fit	0.04	ENSRNOT00000028628 ENSRNOT00000044866	Sf1 Links NCBI RGD Ensembl Show fit	splicing factor 1
chr8_+_76754492 Show fit	0.04	ENSRNOT00000085727	Myo1e Links NCBI RGD Ensembl Show fit	myosin IE
chr7_-_117703094 Show fit	0.04	ENSRNOT00000019754	Tonsl Links NCBI RGD Ensembl Show fit	tonsoku-like, DNA repair protein
chr7_+_121361415 Show fit	0.04	ENSRNOT00000067904	Tab1 Links NCBI RGD Ensembl Show fit	TGF-beta activated kinase 1/MAP3K7 binding protein 1
chr18_+_63524452 Show fit	0.04	ENSRNOT00000023430	Cep192 Links NCBI RGD Ensembl Show fit	centrosomal protein 192
chr4_-_21668570 Show fit	0.04	ENSRNOT00000007723	RGD1563349 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 9330182L06
chr12_-_43503456 Show fit	0.04	ENSRNOT00000078445	Med13l Links NCBI RGD Ensembl Show fit	mediator complex subunit 13-like
chr2_-_260884449 Show fit	0.04	ENSRNOT00000032874	Tyw3 Links NCBI RGD Ensembl Show fit	tRNA-yW synthesizing protein 3 homolog
chr8_-_111761871 Show fit	0.04	ENSRNOT00000056483	RGD1310507 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1300017J02
chr20_+_27173213 Show fit	0.04	ENSRNOT00000073617	Hnrnph3 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein H3
chr10_-_86690815 Show fit	0.04	ENSRNOT00000012537	Nr1d1 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 1, group D, member 1
chr8_+_75625174 Show fit	0.04	ENSRNOT00000013742	Ice2 Links NCBI RGD Ensembl Show fit	interactor of little elongation complex ELL subunit 2
chr1_-_88657845 Show fit	0.04	ENSRNOT00000074211	LOC100912380 Links NCBI RGD Ensembl Show fit	calpain small subunit 1-like
chr5_+_173148884 Show fit	0.04	ENSRNOT00000041753	LOC100364191 Links NCBI RGD Ensembl Show fit	hCG1994130-like
chr1_+_214664537 Show fit	0.04	ENSRNOT00000075002	AABR07006030.1 Links NCBI RGD Ensembl Show fit
chr20_+_27352276 Show fit	0.04	ENSRNOT00000076534	Rn50_20_0292.1 Links NCBI RGD Ensembl Show fit
chr1_-_91063928 Show fit	0.04	ENSRNOT00000072756	Capns1 Links NCBI RGD Ensembl Show fit	calpain, small subunit 1
chr7_-_123101851 Show fit	0.04	ENSRNOT00000090984 ENSRNOT00000005837	Phf5a Links NCBI RGD Ensembl Show fit	PHD finger protein 5A
chr1_-_216744066 Show fit	0.04	ENSRNOT00000087961	Nap1l4 Links NCBI RGD Ensembl Show fit	nucleosome assembly protein 1-like 4
chr6_+_69950500 Show fit	0.04	ENSRNOT00000049500	RGD1559629 Links NCBI RGD Ensembl Show fit	similar to H+ ATP synthase
chr11_-_87977368 Show fit	0.04	ENSRNOT00000002546	Tmem191c Links NCBI RGD Ensembl Show fit	transmembrane protein 191C
chr11_+_83855753 Show fit	0.04	ENSRNOT00000030686	RGD1563956 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L12
chr10_+_108527740 Show fit	0.04	ENSRNOT00000044983	Rnf213 Links NCBI RGD Ensembl Show fit	ring finger protein 213
chr5_+_143027977 Show fit	0.04	ENSRNOT00000012702	Gnl2 Links NCBI RGD Ensembl Show fit	G protein nucleolar 2
chr10_+_36715565 Show fit	0.04	ENSRNOT00000005048	Clk4 Links NCBI RGD Ensembl Show fit	CDC-like kinase 4
chr10_-_105149971 Show fit	0.04	ENSRNOT00000012436	Srp68 Links NCBI RGD Ensembl Show fit	signal recognition particle 68
chr1_-_77893509 Show fit	0.04	ENSRNOT00000015059	Gltscr1 Links NCBI RGD Ensembl Show fit	glioma tumor suppressor candidate region gene 1
chr19_+_46455761 Show fit	0.04	ENSRNOT00000034012 ENSRNOT00000093392	Nudt7 Links NCBI RGD Ensembl Show fit	nudix hydrolase 7
chr18_-_81428971 Show fit	0.04	ENSRNOT00000065201	Zfp407 Links NCBI RGD Ensembl Show fit	zinc finger protein 407
chr5_-_128839433 Show fit	0.03	ENSRNOT00000065280	Osbpl9 Links NCBI RGD Ensembl Show fit	oxysterol binding protein-like 9
chr19_+_42066351 Show fit	0.03	ENSRNOT00000066733	Dhodh Links NCBI RGD Ensembl Show fit	dihydroorotate dehydrogenase (quinone)
chr9_+_10004805 Show fit	0.03	ENSRNOT00000074117	Slc25a41 Links NCBI RGD Ensembl Show fit	solute carrier family 25, member 41
chr12_+_47179664 Show fit	0.03	ENSRNOT00000001551	Cabp1 Links NCBI RGD Ensembl Show fit	calcium binding protein 1
chr3_-_57270036 Show fit	0.03	ENSRNOT00000075860	Mettl8 Links NCBI RGD Ensembl Show fit	methyltransferase like 8
chr12_-_5490935 Show fit	0.03	ENSRNOT00000050885	Zfp958 Links NCBI RGD Ensembl Show fit	zinc finger protein 958
chr2_+_27952129 Show fit	0.03	ENSRNOT00000080551	Gfm2 Links NCBI RGD Ensembl Show fit	G elongation factor, mitochondrial 2
chr19_-_24875137 Show fit	0.03	ENSRNOT00000006152	Adgre5 Links NCBI RGD Ensembl Show fit	adhesion G protein-coupled receptor E5
chr9_+_17122284 Show fit	0.03	ENSRNOT00000077749	Polr1c Links NCBI RGD Ensembl Show fit	RNA polymerase I subunit C
chr11_+_72892448 Show fit	0.03	ENSRNOT00000075655	LOC103689978 Links NCBI RGD Ensembl Show fit	sentrin-specific protease 5
chr8_+_117297670 Show fit	0.03	ENSRNOT00000082628	Qars Links NCBI RGD Ensembl Show fit	glutaminyl-tRNA synthetase
chr4_+_147455533 Show fit	0.03	ENSRNOT00000081957	Tsen2 Links NCBI RGD Ensembl Show fit	tRNA splicing endonuclease subunit 2
chr6_+_72092194 Show fit	0.03	ENSRNOT00000005670	G2e3 Links NCBI RGD Ensembl Show fit	G2/M-phase specific E3 ubiquitin protein ligase
chr16_+_20109200 Show fit	0.03	ENSRNOT00000079784	Jak3 Links NCBI RGD Ensembl Show fit	Janus kinase 3
chr7_+_2635743 Show fit	0.03	ENSRNOT00000004223	Mip Links NCBI RGD Ensembl Show fit	major intrinsic protein of lens fiber
chr2_-_173087648 Show fit	0.03	ENSRNOT00000091079	Iqcj Links NCBI RGD Ensembl Show fit	IQ motif containing J
chr10_-_109909646 Show fit	0.03	ENSRNOT00000074362 ENSRNOT00000088907	Dcxr Links NCBI RGD Ensembl Show fit	dicarbonyl and L-xylulose reductase
chr17_-_78812111 Show fit	0.03	ENSRNOT00000021506	Dclre1c Links NCBI RGD Ensembl Show fit	DNA cross-link repair 1C
chr13_-_91981432 Show fit	0.03	ENSRNOT00000004637	AABR07021804.1 Links NCBI RGD Ensembl Show fit
chr2_+_27003783 Show fit	0.03	ENSRNOT00000061507	Poc5 Links NCBI RGD Ensembl Show fit	POC5 centriolar protein
chr14_+_84282073 Show fit	0.03	ENSRNOT00000078271	Sec14l4 Links NCBI RGD Ensembl Show fit	SEC14-like lipid binding 4
chr11_+_87522971 Show fit	0.03	ENSRNOT00000043545	Smpd4 Links NCBI RGD Ensembl Show fit	sphingomyelin phosphodiesterase 4
chr12_-_16395029 Show fit	0.03	ENSRNOT00000001700	Nudt1 Links NCBI RGD Ensembl Show fit	nudix hydrolase 1
chr9_+_10760113 Show fit	0.03	ENSRNOT00000073054	Arrdc5 Links NCBI RGD Ensembl Show fit	arrestin domain containing 5
chr14_+_84393182 Show fit	0.03	ENSRNOT00000008355	Sf3a1 Links NCBI RGD Ensembl Show fit	splicing factor 3a, subunit 1
chr10_+_61626597 Show fit	0.03	ENSRNOT00000003750	Mettl16 Links NCBI RGD Ensembl Show fit	methyltransferase like 16
chr8_+_70317586 Show fit	0.03	ENSRNOT00000016260	Dennd4a Links NCBI RGD Ensembl Show fit	DENN domain containing 4A
chr12_-_40332612 Show fit	0.03	ENSRNOT00000001691	Atxn2 Links NCBI RGD Ensembl Show fit	ataxin 2
chr1_-_263885169 Show fit	0.03	ENSRNOT00000030782	Chuk Links NCBI RGD Ensembl Show fit	conserved helix-loop-helix ubiquitous kinase
chr5_+_58144705 Show fit	0.03	ENSRNOT00000019886	Galt Links NCBI RGD Ensembl Show fit	galactose-1-phosphate uridylyltransferase

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0046416	alanine catabolic process(GO:0006524) pyruvate family amino acid catabolic process(GO:0009080) D-amino acid metabolic process(GO:0046416)
0.1	0.2	GO:0046462	monoacylglycerol metabolic process(GO:0046462) monoacylglycerol catabolic process(GO:0052651)
0.0	0.2	GO:1902990	mitotic telomere maintenance via semi-conservative replication(GO:1902990)
0.0	0.2	GO:2001199	negative regulation of dendritic cell differentiation(GO:2001199)
0.0	0.2	GO:0010728	regulation of hydrogen peroxide biosynthetic process(GO:0010728)
0.0	0.1	GO:0045900	negative regulation of translational elongation(GO:0045900)
0.0	0.1	GO:0090526	regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526)
0.0	0.1	GO:1902994	negative regulation of amyloid precursor protein biosynthetic process(GO:0042985) regulation of phospholipid efflux(GO:1902994) positive regulation of phospholipid efflux(GO:1902995)
0.0	0.1	GO:0009177	pyrimidine deoxyribonucleoside monophosphate biosynthetic process(GO:0009177) dUMP metabolic process(GO:0046078)
0.0	0.1	GO:0046604	positive regulation of mitotic centrosome separation(GO:0046604)
0.0	0.1	GO:1990009	retinal cell apoptotic process(GO:1990009)
0.0	0.2	GO:0048550	negative regulation of pinocytosis(GO:0048550)
0.0	0.1	GO:0034334	adherens junction maintenance(GO:0034334)
0.0	0.1	GO:0072344	rescue of stalled ribosome(GO:0072344)
0.0	0.5	GO:0045663	positive regulation of myoblast differentiation(GO:0045663)
0.0	0.1	GO:0072137	condensed mesenchymal cell proliferation(GO:0072137)
0.0	0.1	GO:1900272	negative regulation of long-term synaptic potentiation(GO:1900272)
0.0	0.2	GO:1901409	positive regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901409)
0.0	0.1	GO:0002943	tRNA dihydrouridine synthesis(GO:0002943)
0.0	0.1	GO:0039536	negative regulation of RIG-I signaling pathway(GO:0039536)
0.0	0.1	GO:2000189	positive regulation of cholesterol homeostasis(GO:2000189)
0.0	0.0	GO:0071947	protein deubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0071947)
0.0	0.0	GO:0035408	histone H3-T6 phosphorylation(GO:0035408)
0.0	0.1	GO:0090245	embryonic neurocranium morphogenesis(GO:0048702) axis elongation involved in somitogenesis(GO:0090245)
0.0	0.0	GO:0030208	dermatan sulfate biosynthetic process(GO:0030208)
0.0	0.0	GO:1902775	mitochondrial large ribosomal subunit assembly(GO:1902775)
0.0	0.0	GO:0033869	coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034) acetyl-CoA catabolic process(GO:0046356)
0.0	0.0	GO:0042938	dipeptide transport(GO:0042938)
0.0	0.1	GO:0030643	cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0	0.1	GO:0006685	sphingomyelin catabolic process(GO:0006685)
0.0	0.0	GO:0002731	negative regulation of dendritic cell cytokine production(GO:0002731) FasL biosynthetic process(GO:0045210)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0005760	gamma DNA polymerase complex(GO:0005760)
0.0	0.1	GO:0071006	U2-type catalytic step 1 spliceosome(GO:0071006)
0.0	0.1	GO:0000127	transcription factor TFIIIC complex(GO:0000127)
0.0	0.2	GO:0043205	microfibril(GO:0001527) fibril(GO:0043205)
0.0	0.0	GO:0035101	FACT complex(GO:0035101)
0.0	0.1	GO:0032437	cuticular plate(GO:0032437)
0.0	0.1	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0	0.1	GO:0071556	integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553)
0.0	0.2	GO:0005662	DNA replication factor A complex(GO:0005662)
0.0	0.0	GO:0046691	intracellular canaliculus(GO:0046691)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0000827	inositol-1,3,4,5,6-pentakisphosphate kinase activity(GO:0000827)
0.1	0.2	GO:0032810	sterol response element binding(GO:0032810)
0.0	0.1	GO:0097363	protein O-GlcNAc transferase activity(GO:0097363)
0.0	0.2	GO:0016890	site-specific endodeoxyribonuclease activity, specific for altered base(GO:0016890)
0.0	0.1	GO:2001070	starch binding(GO:2001070)
0.0	0.2	GO:0004865	protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.0	0.1	GO:0090554	phosphatidylcholine-translocating ATPase activity(GO:0090554)
0.0	0.1	GO:0036435	K48-linked polyubiquitin binding(GO:0036435)
0.0	0.1	GO:0055100	adiponectin binding(GO:0055100)
0.0	0.2	GO:0047372	acylglycerol lipase activity(GO:0047372)
0.0	0.1	GO:0016936	galactoside binding(GO:0016936)
0.0	0.1	GO:0043995	histone acetyltransferase activity (H4-K5 specific)(GO:0043995) histone acetyltransferase activity (H4-K8 specific)(GO:0043996) histone acetyltransferase activity (H4-K16 specific)(GO:0046972)
0.0	0.2	GO:0000900	translation repressor activity, nucleic acid binding(GO:0000900)
0.0	0.1	GO:0017150	tRNA dihydrouridine synthase activity(GO:0017150)
0.0	0.0	GO:0015563	uptake transmembrane transporter activity(GO:0015563)
0.0	0.1	GO:0030899	troponin C binding(GO:0030172) calcium-dependent ATPase activity(GO:0030899)
0.0	0.0	GO:0035403	histone kinase activity (H3-T6 specific)(GO:0035403)
0.0	0.3	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor(GO:0016641)
0.0	0.0	GO:0008384	IkappaB kinase activity(GO:0008384)
0.0	0.2	GO:0017154	semaphorin receptor activity(GO:0017154)
0.0	0.1	GO:0003847	1-alkyl-2-acetylglycerophosphocholine esterase activity(GO:0003847)
0.0	0.1	GO:0042500	aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0	0.0	GO:0047756	chondroitin 4-sulfotransferase activity(GO:0047756)
0.0	0.1	GO:0019960	C-X3-C chemokine binding(GO:0019960)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	ST TUMOR NECROSIS FACTOR PATHWAY	Tumor Necrosis Factor Pathway.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND	Genes involved in Removal of the Flap Intermediate from the C-strand
0.0	0.2	REACTOME VITAMIN B5 PANTOTHENATE METABOLISM	Genes involved in Vitamin B5 (pantothenate) metabolism
0.0	0.1	REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK	Genes involved in Negative regulation of the PI3K/AKT network