rn6_v1_chr4_+_51614676_51614676	0.221588	Foxa3	ENSRNOT00000060494|Asb15|ENSRNOG00000006365|ankyrin repeat and SOCS box containing 15 [Source:RGD Symbol%3BAcc:727860]
rn6_v1_chr12_-_36398206_36398246	0.221042	Foxa3	ENSRNOT00000090944|Tmem132b|ENSRNOG00000038406|transmembrane protein 132B [Source:RGD Symbol%3BAcc:1566191]	ENSRNOT00000058492|Tmem132b|ENSRNOG00000038406|transmembrane protein 132B [Source:RGD Symbol%3BAcc:1566191]
rn6_v1_chr9_+_27034022_27034022	0.19672	Foxa3	ENSRNOT00000029696|Paqr8|ENSRNOG00000012830|progestin and adipoQ receptor family member 8 [Source:RGD Symbol%3BAcc:1311710]
rn6_v1_chr10_-_27179900_27179900	0.182275	Foxa3	ENSRNOT00000082445|Gabrg2|ENSRNOG00000003241|gamma-aminobutyric acid type A receptor gamma 2 subunit [Source:RGD Symbol%3BAcc:61966]
rn6_v1_chr3_-_158328881_158328881	0.167864	Foxa3	ENSRNOT00000044466|Ptprt|ENSRNOG00000032656|protein tyrosine phosphatase%2C receptor type%2C T [Source:RGD Symbol%3BAcc:1309653]
rn6_v1_chr1_-_78521999_78521999	0.167152	Foxa3	ENSRNOT00000021223|Arhgap35|ENSRNOG00000015852|Rho GTPase activating protein 35 [Source:RGD Symbol%3BAcc:1308738]
rn6_v1_chr10_-_37311625_37311625	0.161076	Foxa3	ENSRNOT00000043343|Jade2|ENSRNOG00000004956|jade family PHD finger 2 [Source:RGD Symbol%3BAcc:1309152]
rn6_v1_chr7_+_23403891_23403891	0.150995	Foxa3	ENSRNOT00000037918|Syn3|ENSRNOG00000026866|synapsin III [Source:RGD Symbol%3BAcc:3799]
rn6_v1_chr13_+_43850751_43850751	0.139855	Foxa3	ENSRNOT00000004995|Mgat5|ENSRNOG00000003614|mannosyl (alpha-1%2C6-)-glycoprotein beta-1%2C6-N-acetyl-glucosaminyltransferase [Source:RGD Symbol%3BAcc:620100]
rn6_v1_chr18_+_30890869_30890869	0.139185	Foxa3	ENSRNOT00000060466|Pcdhgb6|ENSRNOG00000039455|protocadherin gamma subfamily B%2C 6 [Source:RGD Symbol%3BAcc:7743693]
rn6_v1_chr14_+_63405408_63405408	0.137704	Foxa3	ENSRNOT00000086658|AABR07015559.1|ENSRNOG00000055015|
rn6_v1_chr3_+_131351587_131351587	0.135124	Foxa3	ENSRNOT00000010835|Btbd3|ENSRNOG00000008088|BTB domain containing 3 [Source:RGD Symbol%3BAcc:1311623]
rn6_v1_chr3_-_119330345_119330345	0.127912	Foxa3	ENSRNOT00000077398|Trpm7|ENSRNOG00000057806|transient receptor potential cation channel%2C subfamily M%2C member 7 [Source:RGD Symbol%3BAcc:620053]	ENSRNOT00000079191|Trpm7|ENSRNOG00000057806|transient receptor potential cation channel%2C subfamily M%2C member 7 [Source:RGD Symbol%3BAcc:620053]
rn6_v1_chr9_+_118849302_118849302	0.127161	Foxa3	ENSRNOT00000087592|Dlgap1|ENSRNOG00000016196|DLG associated protein 1 [Source:RGD Symbol%3BAcc:620223]
rn6_v1_chr6_+_135313008_135313008	0.125882	Foxa3	ENSRNOT00000030864|Tecpr2|ENSRNOG00000021904|tectonin beta-propeller repeat containing 2 [Source:RGD Symbol%3BAcc:1307503]
rn6_v1_chr20_-_6251634_6251634	0.123062	Foxa3	ENSRNOT00000059194|Stk38|ENSRNOG00000000519|serine/threonine kinase 38 [Source:RGD Symbol%3BAcc:1309455]
rn6_v1_chr7_+_71157664_71157664	0.1223	Foxa3	ENSRNOT00000005919|Sdr9c7|ENSRNOG00000004459|short chain dehydrogenase/reductase family 9C%2C member 7 [Source:RGD Symbol%3BAcc:628716]
rn6_v1_chr10_-_27179254_27179254	0.119257	Foxa3	ENSRNOT00000004619|Gabrg2|ENSRNOG00000003241|gamma-aminobutyric acid type A receptor gamma 2 subunit [Source:RGD Symbol%3BAcc:61966]
rn6_v1_chr8_-_115981910_115981910	0.118294	Foxa3	ENSRNOT00000019867|Dock3|ENSRNOG00000014576|dedicator of cyto-kinesis 3 [Source:RGD Symbol%3BAcc:1306677]
rn6_v1_chr12_-_40822159_40822159	0.117439	Foxa3	ENSRNOT00000001826|Hectd4|ENSRNOG00000001352|HECT domain E3 ubiquitin protein ligase 4 [Source:RGD Symbol%3BAcc:1309762]
rn6_v1_chr2_-_258997138_258997145	0.112376	Foxa3	ENSRNOT00000045020|Adgrl2|ENSRNOG00000032660|adhesion G protein-coupled receptor L2 [Source:RGD Symbol%3BAcc:620835]	ENSRNOT00000042256|Adgrl2|ENSRNOG00000032660|adhesion G protein-coupled receptor L2 [Source:RGD Symbol%3BAcc:620835]
rn6_v1_chr1_-_267203986_267203986	0.111365	Foxa3	ENSRNOT00000027574|Sh3pxd2a|ENSRNOG00000020353|SH3 and PX domains 2A [Source:RGD Symbol%3BAcc:1311185]
rn6_v1_chr1_+_214562897_214562897	0.102795	Foxa3	ENSRNOT00000085125|Ap2a2|ENSRNOG00000019534|adaptor-related protein complex 2%2C alpha 2 subunit [Source:RGD Symbol%3BAcc:71015]
rn6_v1_chr1_+_156552328_156552328	0.0999539	Foxa3	ENSRNOT00000055401|Dlg2|ENSRNOG00000022635|discs large MAGUK scaffold protein 2 [Source:RGD Symbol%3BAcc:619895]
rn6_v1_chr16_-_81980027_81980027	0.0932319	Foxa3	ENSRNOT00000043170|Mcf2l|ENSRNOG00000028426|MCF.2 cell line derived transforming sequence-like [Source:RGD Symbol%3BAcc:619782]
rn6_v1_chr5_+_165415136_165415278	0.0920922	Foxa3	ENSRNOT00000016317|Masp2|ENSRNOG00000011258|mannan-binding lectin serine peptidase 2 [Source:RGD Symbol%3BAcc:620214]	ENSRNOT00000079407|Masp2|ENSRNOG00000011258|mannan-binding lectin serine peptidase 2 [Source:RGD Symbol%3BAcc:620214]
rn6_v1_chr2_-_111065413_111065413	0.089426	Foxa3	ENSRNOT00000041111|Nlgn1|ENSRNOG00000032576|neuroligin 1 [Source:RGD Symbol%3BAcc:621117]
rn6_v1_chr3_-_71845232_71845232	0.0889665	Foxa3	ENSRNOT00000078645|Calcrl|ENSRNOG00000054695|calcitonin receptor like receptor [Source:RGD Symbol%3BAcc:2255]
rn6_v1_chr6_-_104631355_104631355	0.0868127	Foxa3	ENSRNOT00000007825|Slc10a1|ENSRNOG00000005794|solute carrier family 10 member 1 [Source:RGD Symbol%3BAcc:3681]
rn6_v1_chr7_-_120770435_120770435	0.0830908	Foxa3	ENSRNOT00000077000|Ddx17|ENSRNOG00000051170|DEAD-box helicase 17 [Source:RGD Symbol%3BAcc:1304945]
rn6_v1_chr8_-_102149912_102149912	0.0814598	Foxa3	ENSRNOT00000011263|RGD1309079|ENSRNOG00000008519|similar to Ab2-095 [Source:RGD Symbol%3BAcc:1309079]
rn6_v1_chr10_+_11393103_11393103	0.0783711	Foxa3	ENSRNOT00000076022|Adcy9|ENSRNOG00000049768|adenylate cyclase 9 [Source:RGD Symbol%3BAcc:1304747]
rn6_v1_chr4_+_170518673_170518673	0.0754323	Foxa3	ENSRNOT00000011803|Atf7ip|ENSRNOG00000008870|activating transcription factor 7 interacting protein [Source:RGD Symbol%3BAcc:1306030]
rn6_v1_chr8_+_77107536_77107536	0.070108	Foxa3	ENSRNOT00000083255|Adam10|ENSRNOG00000054257|ADAM metallopeptidase domain 10 [Source:RGD Symbol%3BAcc:2032]
rn6_v1_chr3_-_162059524_162059524	0.0676315	Foxa3	ENSRNOT00000033873|Zfp334|ENSRNOG00000019099|zinc finger protein 334 [Source:RGD Symbol%3BAcc:1592574]
rn6_v1_chr10_-_103687425_103687425	0.0663932	Foxa3	ENSRNOT00000039284|Cd300lf|ENSRNOG00000021424|Cd300 molecule-like family member F [Source:RGD Symbol%3BAcc:1309733]
rn6_v1_chr10_+_86399827_86399827	0.0653367	Foxa3	ENSRNOT00000009299|Grb7|ENSRNOG00000006990|growth factor receptor bound protein 7 [Source:RGD Symbol%3BAcc:619759]
rn6_v1_chr6_-_67084234_67084234	0.0652889	Foxa3	ENSRNOT00000050372|Nova1|ENSRNOG00000031440|NOVA alternative splicing regulator 1 [Source:RGD Symbol%3BAcc:621345]
rn6_v1_chr12_-_1195591_1195591	0.0635062	Foxa3	ENSRNOT00000001446|Stard13|ENSRNOG00000001090|StAR-related lipid transfer domain containing 13 [Source:RGD Symbol%3BAcc:1564816]
rn6_v1_chr1_+_80141630_80141630	0.0594049	Foxa3	ENSRNOT00000029552|Opa3|ENSRNOG00000025890|optic atrophy 3 [Source:RGD Symbol%3BAcc:1309147]
rn6_v1_chr16_-_25192675_25192675	0.0580116	Foxa3	ENSRNOT00000032289|March1|ENSRNOG00000026310|membrane associated ring-CH-type finger 1 [Source:RGD Symbol%3BAcc:1305148]
rn6_v1_chr5_+_58359498_58359498	0.0579296	Foxa3	ENSRNOT00000000141|Phf24|ENSRNOG00000000129|PHD finger protein 24 [Source:RGD Symbol%3BAcc:1559864]
rn6_v1_chr2_+_44289393_44289393	0.0576429	Foxa3	ENSRNOT00000018877|Il6st|ENSRNOG00000013963|interleukin 6 signal transducer [Source:RGD Symbol%3BAcc:2903]
rn6_v1_chr11_-_45124423_45124423	0.0565903	Foxa3	ENSRNOT00000046383|Filip1l|ENSRNOG00000001645|filamin A interacting protein 1-like [Source:RGD Symbol%3BAcc:1565927]
rn6_v1_chr4_+_181103774_181103774	0.0536995	Foxa3	ENSRNOT00000084207|Arntl2|ENSRNOG00000001830|aryl hydrocarbon receptor nuclear translocator-like 2 [Source:RGD Symbol%3BAcc:620230]	ENSRNOT00000055473|Arntl2|ENSRNOG00000001830|aryl hydrocarbon receptor nuclear translocator-like 2 [Source:RGD Symbol%3BAcc:620230]	ENSRNOT00000077619|Arntl2|ENSRNOG00000001830|aryl hydrocarbon receptor nuclear translocator-like 2 [Source:RGD Symbol%3BAcc:620230]
rn6_v1_chr20_-_27308069_27308069	0.0527533	Foxa3	ENSRNOT00000056047|Slc25a16|ENSRNOG00000000387|solute carrier family 25 member 16 [Source:RGD Symbol%3BAcc:1311311]
rn6_v1_chr1_-_131460473_131460473	0.0513055	Foxa3	ENSRNOT00000084336|Nr2f2|ENSRNOG00000010308|nuclear receptor subfamily 2%2C group F%2C member 2 [Source:RGD Symbol%3BAcc:69305]
rn6_v1_chr14_+_17228856_17228856	0.050094	Foxa3	ENSRNOT00000003082|Cxcl9|ENSRNOG00000022242|C-X-C motif chemokine ligand 9 [Source:RGD Symbol%3BAcc:628798]
rn6_v1_chr20_-_38985036_38985036	0.0491786	Foxa3	ENSRNOT00000001066|Serinc1|ENSRNOG00000029360|serine incorporator 1 [Source:RGD Symbol%3BAcc:727843]
rn6_v1_chr9_+_66888393_66888393	0.0476012	Foxa3	ENSRNOT00000023536|Carf|ENSRNOG00000017491|calcium responsive transcription factor [Source:RGD Symbol%3BAcc:1306822]
rn6_v1_chr1_+_277459200_277459200	0.0463455	Foxa3	ENSRNOT00000086008|AABR07007023.1|ENSRNOG00000056577|
rn6_v1_chr15_-_28406046_28406046	0.0446857	Foxa3	ENSRNOT00000015418|Zfp219|ENSRNOG00000011544|zinc finger protein 219 [Source:RGD Symbol%3BAcc:1359259]
rn6_v1_chr14_+_39964588_39964588	0.0446015	Foxa3	ENSRNOT00000003240|Gabrg1|ENSRNOG00000002360|gamma-aminobutyric acid type A receptor gamma 1 subunit [Source:RGD Symbol%3BAcc:621732]
rn6_v1_chr13_-_84619023_84619042	0.0435127	Foxa3	ENSRNOT00000089827|Pogk|ENSRNOG00000032058|pogo transposable element with KRAB domain [Source:RGD Symbol%3BAcc:1308951]	ENSRNOT00000045056|Pogk|ENSRNOG00000032058|pogo transposable element with KRAB domain [Source:RGD Symbol%3BAcc:1308951]
rn6_v1_chr14_-_21128505_21128505	0.0434444	Foxa3	ENSRNOT00000004776|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]
rn6_v1_chr7_-_138483612_138483612	0.0429722	Foxa3	ENSRNOT00000085620|Slc38a4|ENSRNOG00000006653|solute carrier family 38%2C member 4 [Source:RGD Symbol%3BAcc:621836]
rn6_v1_chr6_+_93462852_93462852	0.0422121	Foxa3	ENSRNOT00000089473|Arid4a|ENSRNOG00000026239|AT-rich interaction domain 4A [Source:RGD Symbol%3BAcc:1307442]
rn6_v1_chr8_-_94920441_94920441	0.0394689	Foxa3	ENSRNOT00000014165|Cep162|ENSRNOG00000010608|centrosomal protein 162 [Source:RGD Symbol%3BAcc:1307365]
rn6_v1_chr13_+_83073866_83073866	0.0393579	Foxa3	ENSRNOT00000075996|Dpt|ENSRNOG00000002947|dermatopontin [Source:RGD Symbol%3BAcc:1307176]
rn6_v1_chr6_+_50528823_50528823	0.0380728	Foxa3	ENSRNOT00000008321|Lamb1|ENSRNOG00000005678|laminin subunit beta 1 [Source:RGD Symbol%3BAcc:1306311]
rn6_v1_chr1_+_234252757_234252757	0.0376065	Foxa3	ENSRNOT00000091814|Rorb|ENSRNOG00000013413|RAR-related orphan receptor B [Source:RGD Symbol%3BAcc:1306778]
rn6_v1_chr15_+_34216833_34216833	0.0372725	Foxa3	ENSRNOT00000025260|Pck2|ENSRNOG00000018536|phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:RGD Symbol%3BAcc:1311112]
rn6_v1_chr6_-_108167185_108167185	0.0362027	Foxa3	ENSRNOT00000015545|Aldh6a1|ENSRNOG00000011419|aldehyde dehydrogenase 6 family%2C member A1 [Source:RGD Symbol%3BAcc:621556]
rn6_v1_chr11_-_70498391_70498437	0.0361051	Foxa3	ENSRNOT00000040167|Slc12a8|ENSRNOG00000001792|solute carrier family 12%2C member 8 [Source:RGD Symbol%3BAcc:628730]	ENSRNOT00000086495|Slc12a8|ENSRNOG00000001792|solute carrier family 12%2C member 8 [Source:RGD Symbol%3BAcc:628730]
rn6_v1_chr2_-_27364906_27364906	0.0359703	Foxa3	ENSRNOT00000078639|Polk|ENSRNOG00000060626|DNA polymerase kappa [Source:RGD Symbol%3BAcc:620058]
rn6_v1_chr10_-_88060561_88060561	0.0358728	Foxa3	ENSRNOT00000019133|Krt19|ENSRNOG00000014233|keratin 19 [Source:RGD Symbol%3BAcc:619936]
rn6_v1_chr14_+_8080275_8080277	0.0352893	Foxa3	ENSRNOT00000065965|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]	ENSRNOT00000092542|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]
rn6_v1_chr1_-_40921508_40921508	0.0344593	Foxa3	ENSRNOT00000026433|Zbtb2|ENSRNOG00000019544|zinc finger and BTB domain containing 2 [Source:RGD Symbol%3BAcc:1306621]
rn6_v1_chr2_+_34546988_34546988	0.0341554	Foxa3	ENSRNOT00000072577|Adamts6|ENSRNOG00000012655|ADAM metallopeptidase with thrombospondin type 1 motif%2C 6 [Source:RGD Symbol%3BAcc:1307678]
rn6_v1_chr6_-_108660063_108660063	0.0338726	Foxa3	ENSRNOT00000006240|Arel1|ENSRNOG00000004382|apoptosis resistant E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1307597]
rn6_v1_chr3_+_122836446_122836446	0.0338354	Foxa3	ENSRNOT00000028816|Ebf4|ENSRNOG00000007408|early B-cell factor 4 [Source:RGD Symbol%3BAcc:1588215]
rn6_v1_chr13_-_50509916_50509916	0.0337114	Foxa3	ENSRNOT00000076747|Ren|ENSRNOG00000002937|renin [Source:RGD Symbol%3BAcc:3554]
rn6_v1_chrX_+_35599258_35599291	0.0336889	Foxa3	ENSRNOT00000072627|Cdkl5|ENSRNOG00000003742|cyclin-dependent kinase-like 5 [Source:RGD Symbol%3BAcc:2324133]	ENSRNOT00000005061|Cdkl5|ENSRNOG00000003742|cyclin-dependent kinase-like 5 [Source:RGD Symbol%3BAcc:2324133]
rn6_v1_chr18_+_16146447_16146447	0.0320111	Foxa3	ENSRNOT00000022117|Galnt1|ENSRNOG00000016207|polypeptide N-acetylgalactosaminyltransferase 1 [Source:RGD Symbol%3BAcc:620358]
rn6_v1_chr11_-_87924816_87924816	0.0311008	Foxa3	ENSRNOT00000031819|Serpind1|ENSRNOG00000001865|serpin family D member 1 [Source:RGD Symbol%3BAcc:619854]
rn6_v1_chr20_+_7330250_7330250	0.0307614	Foxa3	ENSRNOT00000090993|LOC499407|ENSRNOG00000058912|LRRGT00097 [Source:RGD Symbol%3BAcc:1563561]
rn6_v1_chr18_+_59748444_59748444	0.0303023	Foxa3	ENSRNOT00000024752|St8sia3|ENSRNOG00000018305|ST8 alpha-N-acetyl-neuraminide alpha-2%2C8-sialyltransferase 3 [Source:RGD Symbol%3BAcc:3680]
rn6_v1_chr7_+_63467216_63467216	0.0301608	Foxa3	ENSRNOT00000064349|LOC100909505|ENSRNOG00000047350|N-acetylglucosamine-6-sulfatase-like [Source:RGD Symbol%3BAcc:6503308]
rn6_v1_chr18_-_58097316_58097316	0.0301301	Foxa3	ENSRNOT00000088527|AABR07032265.1|ENSRNOG00000059754|
rn6_v1_chr14_-_21127868_21127875	0.0290837	Foxa3	ENSRNOT00000020608|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]	ENSRNOT00000092172|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]
rn6_v1_chr13_-_91872954_91873096	0.028772	Foxa3	ENSRNOT00000004613|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]	ENSRNOT00000079263|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]
rn6_v1_chr13_+_74456487_74456487	0.0280843	Foxa3	ENSRNOT00000065801|Angptl1|ENSRNOG00000004712|angiopoietin-like 1 [Source:RGD Symbol%3BAcc:1598128]
rn6_v1_chr1_+_264741911_264741911	0.0269514	Foxa3	ENSRNOT00000019956|Sema4g|ENSRNOG00000014650|semaphorin 4G [Source:RGD Symbol%3BAcc:1310436]
rn6_v1_chr14_+_42714315_42714315	0.0268248	Foxa3	ENSRNOT00000084095|Phox2b|ENSRNOG00000051929|paired-like homeobox 2b [Source:RGD Symbol%3BAcc:1560582]	ENSRNOT00000091449|Phox2b|ENSRNOG00000051929|paired-like homeobox 2b [Source:RGD Symbol%3BAcc:1560582]
rn6_v1_chr6_+_108167716_108167716	0.0264833	Foxa3	ENSRNOT00000064426|Lin52|ENSRNOG00000043441|lin-52 DREAM MuvB core complex component [Source:RGD Symbol%3BAcc:1306798]
rn6_v1_chr3_-_90751055_90751055	0.0259305	Foxa3	ENSRNOT00000040741|LOC499843|ENSRNOG00000032177|LRRGT00091 [Source:RGD Symbol%3BAcc:1560877]
rn6_v1_chr7_+_26522314_26522314	0.0258669	Foxa3	ENSRNOT00000011572|Slc41a2|ENSRNOG00000008713|solute carrier family 41 member 2 [Source:RGD Symbol%3BAcc:1307292]
rn6_v1_chr6_+_42947334_42947334	0.0255648	Foxa3	ENSRNOT00000041376|RGD1563157|ENSRNOG00000032523|similar to 60S ribosomal protein L35 [Source:RGD Symbol%3BAcc:1563157]
rn6_v1_chr2_+_69415057_69415057	0.0251733	Foxa3	ENSRNOT00000013152|Cdh10|ENSRNOG00000009771|cadherin 10 [Source:RGD Symbol%3BAcc:619741]
rn6_v1_chr6_+_86872903_86872903	0.0222182	Foxa3	ENSRNOT00000086894|Fancm|ENSRNOG00000056721|Fanconi anemia%2C complementation group M [Source:RGD Symbol%3BAcc:1307897]
rn6_v1_chr7_-_15072703_15072703	0.0216357	Foxa3	ENSRNOT00000087294|Zfp799|ENSRNOG00000032552|zinc finger protein 799 [Source:RGD Symbol%3BAcc:1359692]
rn6_v1_chr8_+_85417838_85417838	0.021534	Foxa3	ENSRNOT00000012257|Ick|ENSRNOG00000008691|intestinal cell kinase [Source:RGD Symbol%3BAcc:71050]
rn6_v1_chr11_+_74984613_74984613	0.0207559	Foxa3	ENSRNOT00000035049|Atp13a5|ENSRNOG00000024127|ATPase 13A5 [Source:RGD Symbol%3BAcc:1306792]
rn6_v1_chr16_-_20994379_20994379	0.0204069	Foxa3	ENSRNOT00000027639|Tmem161a|ENSRNOG00000020390|transmembrane protein 161A [Source:RGD Symbol%3BAcc:1307703]
rn6_v1_chr13_-_74331214_74331214	0.0202637	Foxa3	ENSRNOT00000006018|Fam20b|ENSRNOG00000004337|FAM20B%2C glycosaminoglycan xylosylkinase [Source:RGD Symbol%3BAcc:1311162]
rn6_v1_chr2_-_23909016_23909016	0.0201531	Foxa3	ENSRNOT00000084044|Scamp1|ENSRNOG00000061582|secretory carrier membrane protein 1 [Source:RGD Symbol%3BAcc:3625]
rn6_v1_chr3_+_148635775_148635775	0.0196432	Foxa3	ENSRNOT00000067261|Tm9sf4|ENSRNOG00000009406|transmembrane 9 superfamily member 4 [Source:RGD Symbol%3BAcc:1307768]
rn6_v1_chr1_-_220165678_220165678	0.0195578	Foxa3	ENSRNOT00000026915|Bbs1|ENSRNOG00000019832|Bardet-Biedl syndrome 1 [Source:RGD Symbol%3BAcc:1307581]
rn6_v1_chr7_-_97605113_97605113	0.0194805	Foxa3	ENSRNOT00000089734|AABR07058000.1|ENSRNOG00000054951|
rn6_v1_chr20_+_29655226_29655226	0.0193225	Foxa3	ENSRNOT00000089059|Spock2|ENSRNOG00000061544|SPARC/osteonectin%2C cwcv and kazal like domains proteoglycan 2 [Source:RGD Symbol%3BAcc:1308568]
rn6_v1_chr2_-_147819335_147819335	0.0183962	Foxa3	ENSRNOT00000057909|Ankub1|ENSRNOG00000043466|ankyrin repeat and ubiquitin domain containing 1 [Source:RGD Symbol%3BAcc:2320491]
rn6_v1_chr20_+_44060731_44060731	0.0183298	Foxa3	ENSRNOT00000000737|Lama4|ENSRNOG00000000599|laminin subunit alpha 4 [Source:RGD Symbol%3BAcc:1560062]
rn6_v1_chr7_+_132857628_132857628	0.0181805	Foxa3	ENSRNOT00000005438|Lrrk2|ENSRNOG00000004048|leucine-rich repeat kinase 2 [Source:RGD Symbol%3BAcc:1561168]
rn6_v1_chr19_-_11669578_11669578	0.0175036	Foxa3	ENSRNOT00000026373|Gnao1|ENSRNOG00000019482|G protein subunit alpha o1 [Source:RGD Symbol%3BAcc:628732]
rn6_v1_chr8_-_90483077_90483077	0.0173403	Foxa3	ENSRNOT00000011864|Phip|ENSRNOG00000008652|pleckstrin homology domain interacting protein [Source:RGD Symbol%3BAcc:1564964]
rn6_v1_chr11_-_782954_782954	0.0169231	Foxa3	ENSRNOT00000040065|Epha3|ENSRNOG00000030285|Eph receptor A3 [Source:RGD Symbol%3BAcc:68389]
rn6_v1_chr5_+_120568242_120568242	0.0155638	Foxa3	ENSRNOT00000050597|Lepr|ENSRNOG00000023664|leptin receptor [Source:RGD Symbol%3BAcc:3001]
rn6_v1_chr1_-_189182306_189182306	0.0155457	Foxa3	ENSRNOT00000021249|Gp2|ENSRNOG00000015716|glycoprotein 2 [Source:RGD Symbol%3BAcc:621695]
rn6_v1_chr5_+_49311030_49311030	0.0155235	Foxa3	ENSRNOT00000010850|Cnr1|ENSRNOG00000008223|cannabinoid receptor 1 [Source:RGD Symbol%3BAcc:2369]
rn6_v1_chr9_-_17206994_17206994	0.01552	Foxa3	ENSRNOT00000026195|Gtpbp2|ENSRNOG00000019332|GTP binding protein 2 [Source:RGD Symbol%3BAcc:1306367]
rn6_v1_chr9_+_111649631_111649631	0.014508	Foxa3	ENSRNOT00000056430|Fer|ENSRNOG00000015898|FER tyrosine kinase [Source:RGD Symbol%3BAcc:1306273]
rn6_v1_chrX_+_113510621_113510621	0.0129483	Foxa3	ENSRNOT00000025912|Nxt2|ENSRNOG00000019168|nuclear transport factor 2-like export factor 2 [Source:RGD Symbol%3BAcc:1560204]
rn6_v1_chr2_+_144861455_144861459	0.0125021	Foxa3	ENSRNOT00000093284|Dclk1|ENSRNOG00000032922|doublecortin-like kinase 1 [Source:RGD Symbol%3BAcc:68437]	ENSRNOT00000019748|Dclk1|ENSRNOG00000032922|doublecortin-like kinase 1 [Source:RGD Symbol%3BAcc:68437]	ENSRNOT00000072110|Dclk1|ENSRNOG00000032922|doublecortin-like kinase 1 [Source:RGD Symbol%3BAcc:68437]
rn6_v1_chr1_-_134870255_134870255	0.0114373	Foxa3	ENSRNOT00000055829|Chd2|ENSRNOG00000012716|chromodomain helicase DNA binding protein 2 [Source:RGD Symbol%3BAcc:1310056]
rn6_v1_chr10_-_46404642_46404642	0.0113658	Foxa3	ENSRNOT00000083698|Pemt|ENSRNOG00000054423|phosphatidylethanolamine N-methyltransferase [Source:RGD Symbol%3BAcc:3297]
rn6_v1_chr2_+_197752544_197752544	0.010682	Foxa3	ENSRNOT00000079196|Ensa|ENSRNOG00000048617|endosulfine alpha [Source:RGD Symbol%3BAcc:62007]	ENSRNOT00000075511|Ensa|ENSRNOG00000048617|endosulfine alpha [Source:RGD Symbol%3BAcc:62007]
rn6_v1_chr11_-_69223158_69223158	0.0104584	Foxa3	ENSRNOT00000067060|Mylk|ENSRNOG00000002215|myosin light chain kinase [Source:RGD Symbol%3BAcc:1310915]
rn6_v1_chr10_-_55783489_55783489	0.0100743	Foxa3	ENSRNOT00000010415|Alox15b|ENSRNOG00000007778|arachidonate 15-lipoxygenase%2C type B [Source:RGD Symbol%3BAcc:628809]
rn6_v1_chr1_+_72545596_72545596	0.0100464	Foxa3	ENSRNOT00000022698|Shisa7|ENSRNOG00000016877|shisa family member 7 [Source:RGD Symbol%3BAcc:1583944]
rn6_v1_chr7_-_15073052_15073052	0.00981755	Foxa3	ENSRNOT00000037708|Zfp799|ENSRNOG00000032552|zinc finger protein 799 [Source:RGD Symbol%3BAcc:1359692]
rn6_v1_chr18_+_3887419_3887419	0.00866847	Foxa3	ENSRNOT00000093089|Lama3|ENSRNOG00000011300|laminin subunit alpha 3 [Source:RGD Symbol%3BAcc:628776]
rn6_v1_chr11_-_15858281_15858281	0.0080475	Foxa3	ENSRNOT00000090586|AABR07033287.1|ENSRNOG00000055793|
rn6_v1_chr8_+_91099491_91099491	0.00797392	Foxa3	ENSRNOT00000084852|Sh3bgrl2|ENSRNOG00000009613|SH3 domain binding glutamate-rich protein like 2 [Source:RGD Symbol%3BAcc:1591931]
rn6_v1_chr1_+_178636544_178636544	0.00649559	Foxa3	ENSRNOT00000092099|Spon1|ENSRNOG00000058003|spondin 1 [Source:RGD Symbol%3BAcc:619918]
rn6_v1_chr1_+_107262659_107262659	0.00564139	Foxa3	ENSRNOT00000022499|Gas2|ENSRNOG00000016717|growth arrest-specific 2 [Source:RGD Symbol%3BAcc:1563167]
rn6_v1_chr5_+_61657507_61657507	0.004305	Foxa3	ENSRNOT00000013228|Tmod1|ENSRNOG00000009761|tropomodulin 1 [Source:RGD Symbol%3BAcc:3874]
rn6_v1_chr1_-_90520012_90520012	0.00295441	Foxa3	ENSRNOT00000028698|Kctd15|ENSRNOG00000021137|potassium channel tetramerization domain containing 15 [Source:RGD Symbol%3BAcc:1583737]
rn6_v1_chr3_+_137154086_137154086	0.00282	Foxa3	ENSRNOT00000034252|Otor|ENSRNOG00000028721|otoraplin [Source:RGD Symbol%3BAcc:1305253]
rn6_v1_chr13_-_1946508_1946508	0.00272234	Foxa3	ENSRNOT00000043890|Dsel|ENSRNOG00000032307|dermatan sulfate epimerase-like [Source:RGD Symbol%3BAcc:1307724]
rn6_v1_chr16_-_3765917_3765917	0.00223847	Foxa3	ENSRNOT00000088284|Duxbl1|ENSRNOG00000025408|double homeobox B-like 1 [Source:RGD Symbol%3BAcc:1311053]
rn6_v1_chr10_-_87521514_87521572	0.000786578	Foxa3	ENSRNOT00000084668|Krtap2-4l|ENSRNOG00000056967|keratin associated protein 2-4-like [Source:RGD Symbol%3BAcc:1595488]	ENSRNOT00000071705|Krtap2-4l|ENSRNOG00000056967|keratin associated protein 2-4-like [Source:RGD Symbol%3BAcc:1595488]
rn6_v1_chr2_+_154555871_154555871	0.000706156	Foxa3	ENSRNOT00000076292|Gmps|ENSRNOG00000051151|guanine monophosphate synthase [Source:RGD Symbol%3BAcc:1310063]
rn6_v1_chr9_-_55256340_55256340	0.000349435	Foxa3	ENSRNOT00000028907|Sdpr|ENSRNOG00000025895|serum deprivation response [Source:RGD Symbol%3BAcc:1359345]
rn6_v1_chr4_+_62220736_62220736	0.000161946	Foxa3	ENSRNOT00000086377|Cald1|ENSRNOG00000010233|caldesmon 1 [Source:RGD Symbol%3BAcc:2256]
