rn6_v1_chr19_+_54766589_54766589	1.82529	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025894|Banp|ENSRNOG00000019140|Btg3 associated nuclear protein [Source:RGD Symbol%3BAcc:1307464]
rn6_v1_chr13_-_68785760_68785771	1.47018	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086460|Swt1|ENSRNOG00000032258|SWT1 RNA endoribonuclease homolog [Source:RGD Symbol%3BAcc:1308695]	ENSRNOT00000044255|Swt1|ENSRNOG00000032258|SWT1 RNA endoribonuclease homolog [Source:RGD Symbol%3BAcc:1308695]
rn6_v1_chr6_-_115616766_115616859	1.23647	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006143|Sel1l|ENSRNOG00000004464|SEL1L ERAD E3 ligase adaptor subunit [Source:RGD Symbol%3BAcc:620147]	ENSRNOT00000045870|Sel1l|ENSRNOG00000004464|SEL1L ERAD E3 ligase adaptor subunit [Source:RGD Symbol%3BAcc:620147]
rn6_v1_chr13_+_68785827_68785827	1.16826	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003517|Trmt1l|ENSRNOG00000002580|tRNA methyltransferase 1-like [Source:RGD Symbol%3BAcc:1307890]
rn6_v1_chr14_+_38192446_38192446	0.992329	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090242|Nfxl1|ENSRNOG00000058588|nuclear transcription factor%2C X-box binding-like 1 [Source:RGD Symbol%3BAcc:1359201]
rn6_v1_chr5_+_165922915_165922923	0.93852	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089179|Dffa|ENSRNOG00000013603|DNA fragmentation factor subunit alpha [Source:RGD Symbol%3BAcc:620334]	ENSRNOT00000059522|Dffa|ENSRNOG00000013603|DNA fragmentation factor subunit alpha [Source:RGD Symbol%3BAcc:620334]
rn6_v1_chr13_-_51784639_51784639	0.931682	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089068|Ppp1r12b|ENSRNOG00000051440|protein phosphatase 1%2C regulatory subunit 12B [Source:RGD Symbol%3BAcc:1309287]
rn6_v1_chr5_+_152606847_152606847	0.833991	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089070|Pafah2|ENSRNOG00000022288|platelet-activating factor acetylhydrolase 2 [Source:RGD Symbol%3BAcc:631399]
rn6_v1_chr11_+_47146308_47146308	0.786644	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002191|Cep97|ENSRNOG00000001609|centrosomal protein 97 [Source:RGD Symbol%3BAcc:1307400]
rn6_v1_chr5_-_169167831_169167831	0.770691	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012407|Phf13|ENSRNOG00000009046|PHD finger protein 13 [Source:RGD Symbol%3BAcc:1308145]
rn6_v1_chr10_-_15346236_15346374	0.74031	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000088104|Capn15|ENSRNOG00000020239|calpain 15 [Source:RGD Symbol%3BAcc:1306514]	ENSRNOT00000027430|Capn15|ENSRNOG00000020239|calpain 15 [Source:RGD Symbol%3BAcc:1306514]
rn6_v1_chr12_+_38303624_38303624	0.736167	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001668|Zcchc8|ENSRNOG00000001243|zinc finger CCHC-type containing 8 [Source:RGD Symbol%3BAcc:1309774]
rn6_v1_chr7_-_145450233_145450301	0.693332	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092974|Calcoco1|ENSRNOG00000015447|calcium binding and coiled coil domain 1 [Source:RGD Symbol%3BAcc:619812]	ENSRNOT00000021523|Calcoco1|ENSRNOG00000015447|calcium binding and coiled coil domain 1 [Source:RGD Symbol%3BAcc:619812]
rn6_v1_chr1_-_266830976_266830976	0.682939	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027450|Pcgf6|ENSRNOG00000020250|polycomb group ring finger 6 [Source:RGD Symbol%3BAcc:1306904]
rn6_v1_chr1_+_165724451_165724451	0.673325	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025827|Fam168a|ENSRNOG00000018873|family with sequence similarity 168%2C member A [Source:RGD Symbol%3BAcc:1308929]
rn6_v1_chr14_+_82350734_82350734	0.672243	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023259|Tmem129|ENSRNOG00000017329|transmembrane protein 129 [Source:RGD Symbol%3BAcc:1310828]
rn6_v1_chr7_-_93502571_93502591	0.648716	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077033|Samd12|ENSRNOG00000043390|sterile alpha motif domain containing 12 [Source:RGD Symbol%3BAcc:1561402]	ENSRNOT00000076080|Samd12|ENSRNOG00000043390|sterile alpha motif domain containing 12 [Source:RGD Symbol%3BAcc:1561402]
rn6_v1_chr8_-_116531784_116531784	0.645709	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024529|Rbm5|ENSRNOG00000018153|RNA binding motif protein 5 [Source:RGD Symbol%3BAcc:1305059]
rn6_v1_chr8_+_116343096_116343096	0.635359	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022092|Ifrd2|ENSRNOG00000016150|interferon-related developmental regulator 2 [Source:RGD Symbol%3BAcc:1310222]
rn6_v1_chr3_-_143063983_143063983	0.620626	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006329|Napb|ENSRNOG00000004753|NSF attachment protein beta [Source:RGD Symbol%3BAcc:1589649]
rn6_v1_chr19_-_31942180_31942180	0.614534	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024924|Otud4|ENSRNOG00000018477|OTU deubiquitinase 4 [Source:RGD Symbol%3BAcc:1305606]
rn6_v1_chr4_+_127164453_127164453	0.612511	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017889|Kbtbd8|ENSRNOG00000013390|kelch repeat and BTB domain containing 8 [Source:RGD Symbol%3BAcc:1563166]
rn6_v1_chr5_+_142933619_142933619	0.597438	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000038013|RGD1560436|ENSRNOG00000025065|similar to hypothetical protein FLJ20508 [Source:RGD Symbol%3BAcc:1560436]
rn6_v1_chr1_+_80028928_80028928	0.580425	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012082|Fbxo46|ENSRNOG00000008815|F-box protein 46 [Source:RGD Symbol%3BAcc:1308393]
rn6_v1_chr12_+_46868416_46868416	0.567821	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001523|Sirt4|ENSRNOG00000001151|sirtuin 4 [Source:RGD Symbol%3BAcc:1310413]
rn6_v1_chr2_+_184600721_184600721	0.561618	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075823|Gatb|ENSRNOG00000037655|glutamyl-tRNA amidotransferase subunit B [Source:RGD Symbol%3BAcc:1307864]
rn6_v1_chr12_-_25638797_25638797	0.552207	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002033|Gatsl2|ENSRNOG00000001484|GATS protein-like 2 [Source:RGD Symbol%3BAcc:1304672]
rn6_v1_chr11_+_84396033_84396033	0.544675	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002316|Abcc5|ENSRNOG00000029178|ATP binding cassette subfamily C member 5 [Source:RGD Symbol%3BAcc:70913]
rn6_v1_chr1_-_89042176_89042176	0.543136	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080842|Kmt2b|ENSRNOG00000055525|lysine methyltransferase 2B [Source:RGD Symbol%3BAcc:7678027]
rn6_v1_chr1_+_265809754_265809754	0.542325	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025221|Pprc1|ENSRNOG00000018561|peroxisome proliferator-activated receptor gamma%2C coactivator-related 1 [Source:RGD Symbol%3BAcc:1309688]
rn6_v1_chr11_+_61748883_61748883	0.540806	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000093552|Qtrt2|ENSRNOG00000060729|queuine tRNA-ribosyltransferase accessory subunit 2 [Source:RGD Symbol%3BAcc:1310054]
rn6_v1_chr13_+_96111800_96111800	0.536272	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005967|Desi2|ENSRNOG00000004524|desumoylating isopeptidase 2 [Source:RGD Symbol%3BAcc:1359392]
rn6_v1_chr5_-_57881944_57881944	0.521642	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033235|RGD1309821|ENSRNOG00000023208|similar to KIAA1161 protein [Source:RGD Symbol%3BAcc:1309821]
rn6_v1_chr8_-_116635851_116635851	0.514874	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024939|Rbm6|ENSRNOG00000018333|RNA binding motif protein 6 [Source:RGD Symbol%3BAcc:1560367]
rn6_v1_chr13_+_48644604_48644668	0.513061	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084259|Rab29|ENSRNOG00000049641|RAB29%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620892]	ENSRNOT00000073669|Rab29|ENSRNOG00000049641|RAB29%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620892]
rn6_v1_chr3_+_138597638_138597638	0.497389	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031623|Zfp133|ENSRNOG00000027955|zinc finger protein 133 [Source:RGD Symbol%3BAcc:1566283]
rn6_v1_chr10_-_104179523_104179523	0.493166	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005292|Slc25a19|ENSRNOG00000003918|solute carrier family 25 member 19 [Source:RGD Symbol%3BAcc:1359554]
rn6_v1_chr3_-_55951584_55951584	0.488665	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000036585|Fastkd1|ENSRNOG00000024335|FAST kinase domains 1 [Source:RGD Symbol%3BAcc:1563531]
rn6_v1_chr9_+_16003058_16003058	0.486948	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081621|Ubr2|ENSRNOG00000015813|ubiquitin protein ligase E3 component n-recognin 2 [Source:RGD Symbol%3BAcc:1593237]	ENSRNOT00000021158|Ubr2|ENSRNOG00000015813|ubiquitin protein ligase E3 component n-recognin 2 [Source:RGD Symbol%3BAcc:1593237]
rn6_v1_chr1_+_101603222_101603222	0.481094	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033278|Izumo1|ENSRNOG00000024678|izumo sperm-egg fusion 1 [Source:RGD Symbol%3BAcc:1565454]
rn6_v1_chr11_+_71151132_71151132	0.479461	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082594|Rubcn|ENSRNOG00000059880|RUN and cysteine rich domain containing beclin 1 interacting protein [Source:RGD Symbol%3BAcc:1305422]	ENSRNOT00000082435|Rubcn|ENSRNOG00000059880|RUN and cysteine rich domain containing beclin 1 interacting protein [Source:RGD Symbol%3BAcc:1305422]
rn6_v1_chr4_-_62663200_62663200	0.478792	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000040969|Cnot4|ENSRNOG00000010795|CCR4-NOT transcription complex%2C subunit 4 [Source:RGD Symbol%3BAcc:1310318]
rn6_v1_chr10_-_57638485_57638485	0.473686	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009468|Dhx33|ENSRNOG00000007054|DEAH-box helicase 33 [Source:RGD Symbol%3BAcc:1307239]
rn6_v1_chr19_+_43338166_43338171	0.459837	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091720|Fuk|ENSRNOG00000059453|fucokinase [Source:RGD Symbol%3BAcc:1307000]	ENSRNOT00000084739|Fuk|ENSRNOG00000059453|fucokinase [Source:RGD Symbol%3BAcc:1307000]
rn6_v1_chr15_-_41770112_41770112	0.440054	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034400|Kpna3|ENSRNOG00000014945|karyopherin subunit alpha 3 [Source:RGD Symbol%3BAcc:1311339]
rn6_v1_chr5_+_135663371_135663371	0.439314	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024375|Mutyh|ENSRNOG00000017887|mutY DNA glycosylase [Source:RGD Symbol%3BAcc:620045]
rn6_v1_chr7_+_58366192_58366192	0.439141	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081891|Zfc3h1|ENSRNOG00000053060|zinc finger%2C C3H1-type containing [Source:RGD Symbol%3BAcc:1306287]
rn6_v1_chr5_+_142731767_142731767	0.436859	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000067762|Inpp5b|ENSRNOG00000048506|inositol polyphosphate-5-phosphatase B [Source:RGD Symbol%3BAcc:1311511]
rn6_v1_chr7_+_40217269_40217269	0.433062	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082090|Cep290|ENSRNOG00000056458|centrosomal protein 290 [Source:RGD Symbol%3BAcc:1311640]
rn6_v1_chr4_+_140092352_140092352	0.433039	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008892|Setmar|ENSRNOG00000006806|SET domain and mariner transposase fusion gene [Source:RGD Symbol%3BAcc:1565882]
rn6_v1_chr2_+_86996497_86996497	0.432013	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042058|Zfp455|ENSRNOG00000031576|zinc finger protein 455 [Source:RGD Symbol%3BAcc:628788]
rn6_v1_chr17_-_20364714_20364714	0.431965	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000070962|Jarid2|ENSRNOG00000045918|jumonji and AT-rich interaction domain containing 2 [Source:RGD Symbol%3BAcc:1591663]
rn6_v1_chr6_-_100011226_100011226	0.430904	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083286|Max|ENSRNOG00000008049|MYC associated factor X [Source:RGD Symbol%3BAcc:621101]	ENSRNOT00000041442|Max|ENSRNOG00000008049|MYC associated factor X [Source:RGD Symbol%3BAcc:621101]
rn6_v1_chr5_-_135561914_135561914	0.428967	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023178|Mmachc|ENSRNOG00000017233|methylmalonic aciduria (cobalamin deficiency) cblC type%2C with homocystinuria [Source:RGD Symbol%3BAcc:1310806]
rn6_v1_chr7_-_63728988_63728988	0.428684	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009645|Xpot|ENSRNOG00000007088|exportin for tRNA [Source:RGD Symbol%3BAcc:1305562]
rn6_v1_chr18_-_56115593_56115593	0.426418	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000045041|Tcof1|ENSRNOG00000026108|treacle ribosome biogenesis factor 1 [Source:RGD Symbol%3BAcc:1309850]
rn6_v1_chr8_-_28044876_28044876	0.417676	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072152|Acad8|ENSRNOG00000048164|acyl-CoA dehydrogenase family%2C member 8 [Source:RGD Symbol%3BAcc:1564209]
rn6_v1_chr14_+_38192870_38192870	0.411925	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077080|Nfxl1|ENSRNOG00000058588|nuclear transcription factor%2C X-box binding-like 1 [Source:RGD Symbol%3BAcc:1359201]
rn6_v1_chr9_-_50884596_50884596	0.410559	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016285|Kdelc1|ENSRNOG00000011740|KDEL motif containing 1 [Source:RGD Symbol%3BAcc:1304684]
rn6_v1_chr14_-_85772762_85772762	0.407756	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015627|Ccdc117|ENSRNOG00000010706|coiled-coil domain containing 117 [Source:RGD Symbol%3BAcc:1561762]
rn6_v1_chr19_+_17115412_17115412	0.402914	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015876|Rpgrip1l|ENSRNOG00000011829|Rpgrip1-like [Source:RGD Symbol%3BAcc:1311099]
rn6_v1_chr5_+_173542358_173542358	0.402377	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027347|RGD1311517|ENSRNOG00000020199|similar to RIKEN cDNA 9430015G10 [Source:RGD Symbol%3BAcc:1311517]
rn6_v1_chr1_+_221704493_221704493	0.400608	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028592|Men1|ENSRNOG00000021054|menin 1 [Source:RGD Symbol%3BAcc:3078]
rn6_v1_chr9_-_10801140_10801140	0.400168	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072771|Fem1a|ENSRNOG00000050646|fem-1 homolog A [Source:RGD Symbol%3BAcc:1561112]
rn6_v1_chr14_+_2613406_2613406	0.400059	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000083|Tmed5|ENSRNOG00000000073|transmembrane p24 trafficking protein 5 [Source:RGD Symbol%3BAcc:1359437]
rn6_v1_chr8_-_116532169_116532169	0.39951	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085364|Rbm5|ENSRNOG00000018153|RNA binding motif protein 5 [Source:RGD Symbol%3BAcc:1305059]
rn6_v1_chr7_+_25919867_25919871	0.393806	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009625|Ric8b|ENSRNOG00000007323|RIC8 guanine nucleotide exchange factor B [Source:RGD Symbol%3BAcc:631419]	ENSRNOT00000090153|Ric8b|ENSRNOG00000007323|RIC8 guanine nucleotide exchange factor B [Source:RGD Symbol%3BAcc:631419]
rn6_v1_chr7_-_83348487_83348487	0.393208	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006685|Nudcd1|ENSRNOG00000024929|NudC domain containing 1 [Source:RGD Symbol%3BAcc:1310624]
rn6_v1_chr7_-_40217056_40217056	0.392529	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000029045|Tmtc3|ENSRNOG00000006749|transmembrane and tetratricopeptide repeat containing 3 [Source:RGD Symbol%3BAcc:1306351]
rn6_v1_chr19_-_22632071_22632071	0.387762	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077275|Gpt2|ENSRNOG00000059579|glutamic--pyruvic transaminase 2 [Source:RGD Symbol%3BAcc:1305462]
rn6_v1_chr10_-_13892997_13892997	0.387468	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004192|Traf7|ENSRNOG00000003131|TNF receptor associated factor 7 [Source:RGD Symbol%3BAcc:1559653]
rn6_v1_chr9_+_93607477_93607477	0.386614	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025411|Cops7b|ENSRNOG00000018723|COP9 signalosome subunit 7B [Source:RGD Symbol%3BAcc:1306918]
rn6_v1_chr4_+_49017311_49017311	0.385212	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007476|Ing3|ENSRNOG00000005496|inhibitor of growth family%2C member 3 [Source:RGD Symbol%3BAcc:1310556]
rn6_v1_chr2_+_58534476_58534476	0.383153	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077646|Lmbrd2|ENSRNOG00000054751|LMBR1 domain containing 2 [Source:RGD Symbol%3BAcc:1563920]
rn6_v1_chr1_-_199655147_199655147	0.380681	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026979|LOC103691238|ENSRNOG00000019884|zinc finger protein 239-like [Source:RGD Symbol%3BAcc:9074604]
rn6_v1_chr4_+_168599331_168599331	0.379034	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086719|Crebl2|ENSRNOG00000007115|cAMP responsive element binding protein-like 2 [Source:RGD Symbol%3BAcc:1309502]
rn6_v1_chr1_+_69615603_69615603	0.376711	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084806|Zfp418|ENSRNOG00000015271|zinc finger protein 418 [Source:RGD Symbol%3BAcc:1311663]
rn6_v1_chr2_+_86996798_86996798	0.376499	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000070821|Zfp455|ENSRNOG00000031576|zinc finger protein 455 [Source:RGD Symbol%3BAcc:628788]
rn6_v1_chr7_-_144322240_144322240	0.372182	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089290|LOC100912282|ENSRNOG00000048982|calcium-binding and coiled-coil domain-containing protein 1-like [Source:RGD Symbol%3BAcc:6488185]
rn6_v1_chr1_+_87697005_87697005	0.367226	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028158|Zfp84|ENSRNOG00000029043|zinc finger protein 84 [Source:RGD Symbol%3BAcc:1309815]
rn6_v1_chr7_-_34951644_34951644	0.363008	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030015|Vezt|ENSRNOG00000006514|vezatin%2C adherens junctions transmembrane protein [Source:RGD Symbol%3BAcc:1359117]
rn6_v1_chr4_+_60549197_60549197	0.362403	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071249|Exoc4|ENSRNOG00000046023|exocyst complex component 4 [Source:RGD Symbol%3BAcc:621791]	ENSRNOT00000075621|Exoc4|ENSRNOG00000046023|exocyst complex component 4 [Source:RGD Symbol%3BAcc:621791]
rn6_v1_chr5_+_60250546_60250546	0.359428	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017707|Zcchc7|ENSRNOG00000013078|zinc finger CCHC-type containing 7 [Source:RGD Symbol%3BAcc:1310467]
rn6_v1_chr18_+_27558089_27558089	0.357236	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027499|Fam53c|ENSRNOG00000020261|family with sequence similarity 53%2C member C [Source:RGD Symbol%3BAcc:1593851]
rn6_v1_chr11_+_68493035_68493035	0.352662	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000067984|Pdia5|ENSRNOG00000032327|protein disulfide isomerase family A%2C member 5 [Source:RGD Symbol%3BAcc:1359236]
rn6_v1_chr4_+_118655728_118655728	0.348038	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043082|Aak1|ENSRNOG00000018317|AP2 associated kinase 1 [Source:RGD Symbol%3BAcc:1305520]
rn6_v1_chr5_-_146787676_146787676	0.346072	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008887|Zscan20|ENSRNOG00000005886|zinc finger and SCAN domain containing 20 [Source:RGD Symbol%3BAcc:1562996]
rn6_v1_chr16_+_81587446_81587446	0.342916	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092680|NEWGENE_1582994|ENSRNOG00000019473|DCN1%2C defective in cullin neddylation 1%2C domain containing 2 [Source:RGD Symbol%3BAcc:9432541]
rn6_v1_chr17_-_10575203_10575203	0.34122	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073186|Arl10|ENSRNOG00000045948|ADP-ribosylation factor like GTPase 10 [Source:RGD Symbol%3BAcc:1303298]
rn6_v1_chr7_+_97778260_97778260	0.334265	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064264|Tbc1d31|ENSRNOG00000006103|TBC1 domain family%2C member 31 [Source:RGD Symbol%3BAcc:1587370]
rn6_v1_chr4_+_78024765_78024765	0.331385	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043856|Krba1|ENSRNOG00000007405|KRAB-A domain containing 1 [Source:RGD Symbol%3BAcc:1306967]
rn6_v1_chr5_-_9432343_9432343	0.33088	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009482|Rrs1|ENSRNOG00000007240|ribosome biogenesis regulator homolog [Source:RGD Symbol%3BAcc:1311403]
rn6_v1_chrX_-_68562873_68562873	0.329917	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076193|Ophn1|ENSRNOG00000026573|oligophrenin 1 [Source:RGD Symbol%3BAcc:1563435]
rn6_v1_chr6_+_86713803_86713803	0.329841	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005861|Fam179b|ENSRNOG00000004415|family with sequence similarity 179%2C member B [Source:RGD Symbol%3BAcc:1310474]
rn6_v1_chrX_+_14994016_14994016	0.320356	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006365|Ftsj1|ENSRNOG00000004776|FtsJ RNA methyltransferase homolog 1 (E. coli) [Source:RGD Symbol%3BAcc:1561061]
rn6_v1_chr16_-_54137660_54137660	0.313064	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085435|Pcm1|ENSRNOG00000010155|pericentriolar material 1 [Source:RGD Symbol%3BAcc:620901]
rn6_v1_chrX_-_68563137_68563137	0.312287	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034772|Ophn1|ENSRNOG00000026573|oligophrenin 1 [Source:RGD Symbol%3BAcc:1563435]
rn6_v1_chr1_+_261753364_261753364	0.311263	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076659|R3hcc1l|ENSRNOG00000051256|R3H domain and coiled-coil containing 1-like [Source:RGD Symbol%3BAcc:1307934]
rn6_v1_chr1_+_165382690_165382690	0.30955	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023802|C2cd3|ENSRNOG00000017608|C2 calcium-dependent domain containing 3 [Source:RGD Symbol%3BAcc:1307366]
rn6_v1_chr3_+_162692185_162692185	0.307789	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007768|Ncoa3|ENSRNOG00000005616|nuclear receptor coactivator 3 [Source:RGD Symbol%3BAcc:620109]
rn6_v1_chr11_-_31772984_31772984	0.307199	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002771|Dnajc28|ENSRNOG00000002026|DnaJ heat shock protein family (Hsp40) member C28 [Source:RGD Symbol%3BAcc:1359589]
rn6_v1_chr15_-_33752665_33752665	0.306155	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034102|Zfhx2|ENSRNOG00000025634|zinc finger homeobox 2 [Source:RGD Symbol%3BAcc:735143]
rn6_v1_chrX_-_111325186_111325186	0.305942	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086785|Rbm41|ENSRNOG00000057622|RNA binding motif protein 41 [Source:RGD Symbol%3BAcc:1590579]
rn6_v1_chr1_+_72956026_72956026	0.30538	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031462|Rdh13|ENSRNOG00000027919|retinol dehydrogenase 13 [Source:RGD Symbol%3BAcc:1304959]
rn6_v1_chr2_-_27364906_27364906	0.305258	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078639|Polk|ENSRNOG00000060626|DNA polymerase kappa [Source:RGD Symbol%3BAcc:620058]
rn6_v1_chr1_+_142679345_142679345	0.304313	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034267|Zscan2|ENSRNOG00000022164|zinc finger and SCAN domain containing 2 [Source:RGD Symbol%3BAcc:1584548]
rn6_v1_chr14_-_84393421_84393421	0.302431	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006911|Ccdc157|ENSRNOG00000005147|coiled-coil domain containing 157 [Source:RGD Symbol%3BAcc:1584653]
rn6_v1_chr1_+_264670841_264670924	0.302031	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034814|Slf2|ENSRNOG00000014482|SMC5-SMC6 complex localization factor 2 [Source:RGD Symbol%3BAcc:1560300]	ENSRNOT00000082412|Slf2|ENSRNOG00000014482|SMC5-SMC6 complex localization factor 2 [Source:RGD Symbol%3BAcc:1560300]
rn6_v1_chr6_-_29975730_29975730	0.30022	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075574|Wdcp|ENSRNOG00000049989|WD repeat and coiled coil containing [Source:MGI Symbol%3BAcc:MGI:3040699]
rn6_v1_chr7_+_144121744_144121744	0.293026	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064661|Tarbp2|ENSRNOG00000042355|TARBP2%2C RISC loading complex RNA binding subunit [Source:RGD Symbol%3BAcc:1307375]
rn6_v1_chr20_-_19479325_19479325	0.291227	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000051491|Fam13c|ENSRNOG00000000275|family with sequence similarity 13%2C member C [Source:RGD Symbol%3BAcc:1310149]
rn6_v1_chr15_-_4454958_4454958	0.287021	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000070933|Nudt13|ENSRNOG00000048195|nudix hydrolase 13 [Source:RGD Symbol%3BAcc:1592767]
rn6_v1_chr20_-_46666830_46666830	0.286695	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000331|Cep57l1|ENSRNOG00000000303|centrosomal protein 57-like 1 [Source:RGD Symbol%3BAcc:1311358]
rn6_v1_chr7_+_34952011_34952011	0.28614	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077666|Fgd6|ENSRNOG00000054515|FYVE%2C RhoGEF and PH domain containing 6 [Source:RGD Symbol%3BAcc:1565609]
rn6_v1_chr13_+_50196042_50196042	0.284256	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090858|Zc3h11a|ENSRNOG00000053210|zinc finger CCCH-type containing 11A [Source:RGD Symbol%3BAcc:1308290]
rn6_v1_chr9_-_19880346_19880346	0.28371	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014051|Cyp39a1|ENSRNOG00000010519|cytochrome P450%2C family 39%2C subfamily a%2C polypeptide 1 [Source:RGD Symbol%3BAcc:1307471]
rn6_v1_chr10_+_43744882_43744882	0.28081	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078662|Zfp692|ENSRNOG00000002682|zinc finger protein 692 [Source:RGD Symbol%3BAcc:1306740]
rn6_v1_chr6_-_50786967_50786967	0.279942	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009566|Cbll1|ENSRNOG00000007253|Cbl proto-oncogene like 1 [Source:RGD Symbol%3BAcc:1310703]
rn6_v1_chr2_+_188495629_188495629	0.279078	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027828|Fam189b|ENSRNOG00000020518|family with sequence similarity 189%2C member B [Source:RGD Symbol%3BAcc:1306107]
rn6_v1_chr2_-_178389608_178389608	0.27524	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013262|Etfdh|ENSRNOG00000009538|electron transfer flavoprotein dehydrogenase [Source:RGD Symbol%3BAcc:735052]
rn6_v1_chr2_-_213178632_213178632	0.275213	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023079|LOC108348173|ENSRNOG00000017187|protein arginine N-methyltransferase 6 [Source:RGD Symbol%3BAcc:11469917]
rn6_v1_chr14_+_84393182_84393182	0.274111	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008355|Sf3a1|ENSRNOG00000005218|splicing factor 3a%2C subunit 1 [Source:RGD Symbol%3BAcc:1311477]
rn6_v1_chr19_+_38598165_38598165	0.273996	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027209|Zfp90|ENSRNOG00000020087|zinc finger protein 90 [Source:RGD Symbol%3BAcc:1563077]
rn6_v1_chr8_+_53365857_53365857	0.27185	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080712|Zw10|ENSRNOG00000054479|zw10 kinetochore protein [Source:RGD Symbol%3BAcc:1309197]
rn6_v1_chr14_-_80169431_80169472	0.271409	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079769|Ablim2|ENSRNOG00000007882|actin binding LIM protein family%2C member 2 [Source:RGD Symbol%3BAcc:1303094]	ENSRNOT00000058315|Ablim2|ENSRNOG00000007882|actin binding LIM protein family%2C member 2 [Source:RGD Symbol%3BAcc:1303094]
rn6_v1_chr6_+_76675418_76675437	0.269656	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076169|Brms1l|ENSRNOG00000008249|breast cancer metastasis-suppressor 1-like [Source:RGD Symbol%3BAcc:1306006]	ENSRNOT00000010948|Brms1l|ENSRNOG00000008249|breast cancer metastasis-suppressor 1-like [Source:RGD Symbol%3BAcc:1306006]	ENSRNOT00000082286|Brms1l|ENSRNOG00000051077|breast cancer metastasis-suppressor 1-like [Source:RGD Symbol%3BAcc:1306006]
rn6_v1_chr10_-_5196892_5196892	0.269453	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083982|Clec16a|ENSRNOG00000057378|C-type lectin domain family 16%2C member A [Source:RGD Symbol%3BAcc:1305773]
rn6_v1_chr1_-_265757389_265757389	0.267827	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000054703|C1H10orf76|ENSRNOG00000025523|chromosome 1 open reading frame%2C human C10orf76 [Source:RGD Symbol%3BAcc:9299787]
rn6_v1_chr14_+_81340041_81340146	0.266098	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082612|Nop14|ENSRNOG00000012147|NOP14 nucleolar protein [Source:RGD Symbol%3BAcc:1305605]	ENSRNOT00000066391|Nop14|ENSRNOG00000012147|NOP14 nucleolar protein [Source:RGD Symbol%3BAcc:1305605]
rn6_v1_chr4_-_116786391_116786424	0.266014	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086297|Exoc6b|ENSRNOG00000059615|exocyst complex component 6B [Source:RGD Symbol%3BAcc:1560638]	ENSRNOT00000091490|Exoc6b|ENSRNOG00000059615|exocyst complex component 6B [Source:RGD Symbol%3BAcc:1560638]
rn6_v1_chr3_+_111013856_111013856	0.264885	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016854|Zfyve19|ENSRNOG00000012528|zinc finger FYVE-type containing 19 [Source:RGD Symbol%3BAcc:1561576]
rn6_v1_chr10_-_36336628_36336628	0.26484	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030035|Zfp879|ENSRNOG00000030517|zinc finger protein 879 [Source:RGD Symbol%3BAcc:1563273]
rn6_v1_chr5_-_147846095_147846095	0.262481	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072165|Txlna|ENSRNOG00000048242|taxilin alpha [Source:RGD Symbol%3BAcc:1583435]
rn6_v1_chr9_-_95143092_95143142	0.260337	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064171|Usp40|ENSRNOG00000018395|ubiquitin specific peptidase 40 [Source:RGD Symbol%3BAcc:1309613]	ENSRNOT00000085325|Usp40|ENSRNOG00000018395|ubiquitin specific peptidase 40 [Source:RGD Symbol%3BAcc:1309613]
rn6_v1_chr1_-_37818879_37818879	0.258789	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043747|LOC680200|ENSRNOG00000042308|similar to zinc finger protein 455 [Source:RGD Symbol%3BAcc:1594231]
rn6_v1_chr2_+_199283909_199283909	0.257451	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043194|Acp6|ENSRNOG00000017494|acid phosphatase 6%2C lysophosphatidic [Source:RGD Symbol%3BAcc:1306336]
rn6_v1_chr8_-_132911193_132911193	0.255411	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087799|Fyco1|ENSRNOG00000006336|FYVE and coiled-coil domain containing 1 [Source:RGD Symbol%3BAcc:1309069]
rn6_v1_chr1_-_89007041_89007041	0.255068	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032363|Proser3|ENSRNOG00000024625|proline and serine rich 3 [Source:RGD Symbol%3BAcc:1565712]
rn6_v1_chr6_+_86713604_86713604	0.254268	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000059271|Fam179b|ENSRNOG00000004415|family with sequence similarity 179%2C member B [Source:RGD Symbol%3BAcc:1310474]
rn6_v1_chr6_+_26537707_26537707	0.253743	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000050102|Zfp513|ENSRNOG00000005298|zinc finger protein 513 [Source:RGD Symbol%3BAcc:1310456]
rn6_v1_chr10_+_43744731_43744731	0.25355	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000038123|Zfp692|ENSRNOG00000002682|zinc finger protein 692 [Source:RGD Symbol%3BAcc:1306740]
rn6_v1_chr1_+_278311244_278311244	0.251674	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023309|Trub1|ENSRNOG00000017321|TruB pseudouridine synthase family member 1 [Source:RGD Symbol%3BAcc:1308502]
rn6_v1_chr1_+_157403595_157403595	0.247332	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012781|Ccdc90b|ENSRNOG00000009462|coiled-coil domain containing 90B [Source:RGD Symbol%3BAcc:1308637]
rn6_v1_chr6_-_86713370_86713370	0.24701	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005821|Klhl28|ENSRNOG00000004218|kelch-like family member 28 [Source:RGD Symbol%3BAcc:1311326]
rn6_v1_chr10_-_86690815_86690815	0.246987	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012537|Nr1d1|ENSRNOG00000009329|nuclear receptor subfamily 1%2C group D%2C member 1 [Source:RGD Symbol%3BAcc:628827]
rn6_v1_chr1_-_88428685_88428685	0.243175	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074582|Zfp566|ENSRNOG00000048138|zinc finger protein 566 [Source:RGD Symbol%3BAcc:1563239]
rn6_v1_chr7_+_11660934_11660934	0.237214	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022336|Lmnb2|ENSRNOG00000025742|lamin B2 [Source:RGD Symbol%3BAcc:1563803]
rn6_v1_chr1_+_69853553_69853553	0.236778	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042086|Zfp954|ENSRNOG00000022742|zinc finger protein 954 [Source:RGD Symbol%3BAcc:1561308]
rn6_v1_chr4_+_123118468_123118468	0.235453	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010895|Tmem43|ENSRNOG00000007519|transmembrane protein 43 [Source:RGD Symbol%3BAcc:1549711]
rn6_v1_chrX_+_71155601_71155601	0.234159	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076453|Foxo4|ENSRNOG00000033316|forkhead box O4 [Source:RGD Symbol%3BAcc:1561201]	ENSRNOT00000048521|Foxo4|ENSRNOG00000033316|forkhead box O4 [Source:RGD Symbol%3BAcc:1561201]
rn6_v1_chr5_+_101526551_101526551	0.234015	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015254|Snapc3|ENSRNOG00000010825|small nuclear RNA activating complex%2C polypeptide 3 [Source:RGD Symbol%3BAcc:1305172]
rn6_v1_chr10_-_10881844_10881977	0.234008	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087118|Mgrn1|ENSRNOG00000003234|mahogunin ring finger 1 [Source:RGD Symbol%3BAcc:1311862]	ENSRNOT00000004416|Mgrn1|ENSRNOG00000003234|mahogunin ring finger 1 [Source:RGD Symbol%3BAcc:1311862]
rn6_v1_chr1_-_71399751_71399751	0.233124	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020787|Zfp444|ENSRNOG00000015517|zinc finger protein 444 [Source:RGD Symbol%3BAcc:1304847]
rn6_v1_chr13_+_99473044_99473044	0.232424	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004939|Cnih4|ENSRNOG00000003717|cornichon family AMPA receptor auxiliary protein 4 [Source:RGD Symbol%3BAcc:1559740]
rn6_v1_chr10_-_11935382_11935382	0.23173	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010059|Zfp174|ENSRNOG00000007655|zinc finger protein 174 [Source:RGD Symbol%3BAcc:7498198]
rn6_v1_chr4_+_62703779_62703779	0.230871	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014832|Nup205|ENSRNOG00000010852|nucleoporin 205 [Source:RGD Symbol%3BAcc:1309413]
rn6_v1_chr9_-_17206994_17206994	0.230404	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026195|Gtpbp2|ENSRNOG00000019332|GTP binding protein 2 [Source:RGD Symbol%3BAcc:1306367]
rn6_v1_chr4_+_99823252_99823252	0.230131	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013587|Polr1a|ENSRNOG00000009545|RNA polymerase I subunit A [Source:RGD Symbol%3BAcc:620824]
rn6_v1_chr1_-_169513537_169513537	0.229837	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078058|Trim30c|ENSRNOG00000031202|tripartite motif-containing 30C [Source:RGD Symbol%3BAcc:1566132]
rn6_v1_chr10_-_13996565_13996584	0.229082	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016221|Tsc2|ENSRNOG00000011375|tuberous sclerosis 2 [Source:RGD Symbol%3BAcc:3908]	ENSRNOT00000052138|Tsc2|ENSRNOG00000011375|tuberous sclerosis 2 [Source:RGD Symbol%3BAcc:3908]
rn6_v1_chr3_+_148327965_148327987	0.228054	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010851|Tpx2|ENSRNOG00000008165|TPX2%2C microtubule nucleation factor [Source:RGD Symbol%3BAcc:1311894]	ENSRNOT00000088481|Tpx2|ENSRNOG00000008165|TPX2%2C microtubule nucleation factor [Source:RGD Symbol%3BAcc:1311894]
rn6_v1_chr16_-_54137485_54137485	0.227771	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014202|Pcm1|ENSRNOG00000010155|pericentriolar material 1 [Source:RGD Symbol%3BAcc:620901]
rn6_v1_chr8_-_36374673_36374673	0.225942	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013763|Dcps|ENSRNOG00000009993|decapping enzyme%2C scavenger [Source:RGD Symbol%3BAcc:628887]
rn6_v1_chr9_+_19880473_19880473	0.225885	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000052068|Slc25a27|ENSRNOG00000010592|solute carrier family 25%2C member 27 [Source:RGD Symbol%3BAcc:620787]
rn6_v1_chr3_+_123754057_123754064	0.224708	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034201|Ap5s1|ENSRNOG00000021249|adaptor-related protein complex 5%2C sigma 1 subunit [Source:RGD Symbol%3BAcc:1561852]	ENSRNOT00000084671|Ap5s1|ENSRNOG00000021249|adaptor-related protein complex 5%2C sigma 1 subunit [Source:RGD Symbol%3BAcc:1561852]
rn6_v1_chr5_+_126976456_126976456	0.22447	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014275|Ndc1|ENSRNOG00000010620|NDC1 transmembrane nucleoporin [Source:RGD Symbol%3BAcc:1560173]
rn6_v1_chr2_+_44512895_44512895	0.224395	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013218|Slc38a9|ENSRNOG00000009851|solute carrier family 38%2C member 9 [Source:RGD Symbol%3BAcc:1311881]
rn6_v1_chr7_+_23403891_23403891	0.224154	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000037918|Syn3|ENSRNOG00000026866|synapsin III [Source:RGD Symbol%3BAcc:3799]
rn6_v1_chr12_+_25411207_25411292	0.224108	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077189|Gtf2i|ENSRNOG00000001479|general transcription factor II I [Source:RGD Symbol%3BAcc:727961]	ENSRNOT00000040356|Gtf2i|ENSRNOG00000001479|general transcription factor II I [Source:RGD Symbol%3BAcc:727961]
rn6_v1_chr12_+_19328957_19328957	0.22103	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033288|Cnpy4|ENSRNOG00000027175|canopy FGF signaling regulator 4 [Source:RGD Symbol%3BAcc:1307636]
rn6_v1_chr10_+_20591432_20591432	0.219839	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000059780|Pank3|ENSRNOG00000007419|pantothenate kinase 3 [Source:RGD Symbol%3BAcc:1310531]
rn6_v1_chr8_-_61079526_61079526	0.219376	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000068658|Peak1|ENSRNOG00000042519|pseudopodium-enriched atypical kinase 1 [Source:RGD Symbol%3BAcc:1312026]
rn6_v1_chr6_+_111642411_111642411	0.219023	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016962|Adck1|ENSRNOG00000012685|aarF domain containing kinase 1 [Source:RGD Symbol%3BAcc:1308263]
rn6_v1_chr1_+_282265370_282265370	0.217624	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015687|Grk5|ENSRNOG00000011439|G protein-coupled receptor kinase 5 [Source:RGD Symbol%3BAcc:61985]
rn6_v1_chr1_-_87468288_87468288	0.216341	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042207|Sipa1l3|ENSRNOG00000020703|signal-induced proliferation-associated 1 like 3 [Source:RGD Symbol%3BAcc:1311432]
rn6_v1_chr17_+_18358712_18358712	0.215721	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001979|Nup153|ENSRNOG00000001456|nucleoporin 153 [Source:RGD Symbol%3BAcc:3216]
rn6_v1_chr9_+_65763437_65763437	0.215102	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043558|Stradb|ENSRNOG00000010728|STE20-related kinase adaptor beta [Source:RGD Symbol%3BAcc:1559449]
rn6_v1_chr5_-_64030901_64030901	0.214666	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007711|Erp44|ENSRNOG00000005841|endoplasmic reticulum protein 44 [Source:RGD Symbol%3BAcc:1309176]
rn6_v1_chr10_+_15538872_15538872	0.213917	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000060078|Luc7l|ENSRNOG00000020488|LUC7-like [Source:RGD Symbol%3BAcc:1307542]
rn6_v1_chr2_+_149899836_149899836	0.212181	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086481|RGD1560324|ENSRNOG00000042471|similar to hypothetical protein C130079G13 [Source:RGD Symbol%3BAcc:1560324]
rn6_v1_chr7_+_83348694_83348694	0.209089	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006402|Eny2|ENSRNOG00000004681|ENY2%2C transcription and export complex 2 subunit [Source:RGD Symbol%3BAcc:1596439]
rn6_v1_chr3_+_11795629_11795679	0.208902	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030694|Tor2a|ENSRNOG00000022514|torsin family 2%2C member A [Source:RGD Symbol%3BAcc:1359111]	ENSRNOT00000067500|Tor2a|ENSRNOG00000022514|torsin family 2%2C member A [Source:RGD Symbol%3BAcc:1359111]
rn6_v1_chr3_-_72128973_72128973	0.207024	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009726|Clp1|ENSRNOG00000007416|cleavage and polyadenylation factor I subunit 1 [Source:RGD Symbol%3BAcc:1307679]
rn6_v1_chr1_-_219412816_219412888	0.206972	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083204|Rps6kb2|ENSRNOG00000021689|ribosomal protein S6 kinase B2 [Source:RGD Symbol%3BAcc:1305144]	ENSRNOT00000029580|Rps6kb2|ENSRNOG00000021689|ribosomal protein S6 kinase B2 [Source:RGD Symbol%3BAcc:1305144]
rn6_v1_chr10_-_51669297_51669297	0.206007	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071595|Arhgap44|ENSRNOG00000003603|Rho GTPase activating protein 44 [Source:RGD Symbol%3BAcc:1305664]
rn6_v1_chr10_+_11912543_11912543	0.201583	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000045192|Zfp597|ENSRNOG00000007576|zinc finger protein 597 [Source:RGD Symbol%3BAcc:628674]
rn6_v1_chr5_-_104980641_104980641	0.201022	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071192|Haus6|ENSRNOG00000046028|HAUS augmin-like complex%2C subunit 6 [Source:MGI Symbol%3BAcc:MGI:1923389]
rn6_v1_chr1_+_64046377_64046377	0.200873	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085010|Tmc4|ENSRNOG00000059741|transmembrane channel-like 4 [Source:RGD Symbol%3BAcc:1304811]
rn6_v1_chr4_-_117111653_117111653	0.198394	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000057537|Sfxn5|ENSRNOG00000037871|sideroflexin 5 [Source:RGD Symbol%3BAcc:628706]
rn6_v1_chr10_-_65805693_65805693	0.198062	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012245|Tnfaip1|ENSRNOG00000009069|TNF alpha induced protein 1 [Source:RGD Symbol%3BAcc:3877]
rn6_v1_chr8_+_85413537_85413537	0.197965	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078159|Ick|ENSRNOG00000008691|intestinal cell kinase [Source:RGD Symbol%3BAcc:71050]
rn6_v1_chr7_-_117128798_117128798	0.197461	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000045280|Scrib|ENSRNOG00000032574|scribbled planar cell polarity protein [Source:RGD Symbol%3BAcc:1565055]
rn6_v1_chr15_+_46008613_46008636	0.197245	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066864|Wdfy2|ENSRNOG00000010042|WD repeat and FYVE domain containing 2 [Source:RGD Symbol%3BAcc:1307337]	ENSRNOT00000080537|Wdfy2|ENSRNOG00000010042|WD repeat and FYVE domain containing 2 [Source:RGD Symbol%3BAcc:1307337]
rn6_v1_chr11_+_88831130_88831130	0.196781	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002478|Dnm1l|ENSRNOG00000001813|dynamin 1-like [Source:RGD Symbol%3BAcc:620416]
rn6_v1_chr5_-_142933526_142933526	0.195651	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000048293|Cdca8|ENSRNOG00000031431|cell division cycle associated 8 [Source:RGD Symbol%3BAcc:1566306]
rn6_v1_chr15_+_62406873_62406873	0.195558	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000047572|Olfm4|ENSRNOG00000013280|olfactomedin 4 [Source:RGD Symbol%3BAcc:1311708]
rn6_v1_chr18_-_28495937_28495937	0.195226	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027194|Dnajc18|ENSRNOG00000019995|DnaJ heat shock protein family (Hsp40) member C18 [Source:RGD Symbol%3BAcc:1310237]
rn6_v1_chr18_+_24849545_24849553	0.194751	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061011|Iws1|ENSRNOG00000014630|IWS1%2C SUPT6H interacting protein [Source:RGD Symbol%3BAcc:1304762]	ENSRNOT00000085516|Iws1|ENSRNOG00000014630|IWS1%2C SUPT6H interacting protein [Source:RGD Symbol%3BAcc:1304762]
rn6_v1_chr11_+_88830957_88830968	0.194529	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002482|Dnm1l|ENSRNOG00000001813|dynamin 1-like [Source:RGD Symbol%3BAcc:620416]	ENSRNOT00000002477|Dnm1l|ENSRNOG00000001813|dynamin 1-like [Source:RGD Symbol%3BAcc:620416]
rn6_v1_chr17_-_54070231_54070231	0.194177	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085150|B3galnt2|ENSRNOG00000016855|beta-1%2C3-N-acetylgalactosaminyltransferase 2 [Source:RGD Symbol%3BAcc:1306946]
rn6_v1_chr20_+_48504264_48504264	0.191427	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087740|Cdc40|ENSRNOG00000000581|cell division cycle 40 [Source:RGD Symbol%3BAcc:1307063]
rn6_v1_chr6_-_107080524_107080524	0.191021	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011662|Zfyve1|ENSRNOG00000008614|zinc finger FYVE-type containing 1 [Source:RGD Symbol%3BAcc:1307795]
rn6_v1_chr2_-_2891253_2891253	0.190315	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000029250|Arsk|ENSRNOG00000026937|arylsulfatase family%2C member K [Source:RGD Symbol%3BAcc:1310182]
rn6_v1_chr11_-_61748768_61748768	0.190084	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078879|Ccdc191|ENSRNOG00000057815|coiled-coil domain containing 191 [Source:RGD Symbol%3BAcc:1566314]
rn6_v1_chr1_+_165237847_165237847	0.188099	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022963|Pgm2l1|ENSRNOG00000017079|phosphoglucomutase 2-like 1 [Source:RGD Symbol%3BAcc:1583226]
rn6_v1_chr10_+_89199880_89199880	0.187132	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076865|Cntd1|ENSRNOG00000051150|cyclin N-terminal domain containing 1 [Source:RGD Symbol%3BAcc:1564542]
rn6_v1_chr2_+_93518806_93518806	0.184118	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000050987|Snx16|ENSRNOG00000009953|sorting nexin 16 [Source:RGD Symbol%3BAcc:620295]
rn6_v1_chr11_+_24263281_24263281	0.183274	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086946|Gabpa|ENSRNOG00000053205|GA binding protein transcription factor%2C alpha subunit [Source:RGD Symbol%3BAcc:1310802]
rn6_v1_chr9_-_52912293_52912293	0.182762	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005228|Slc40a1|ENSRNOG00000003872|solute carrier family 40 member 1 [Source:RGD Symbol%3BAcc:620180]
rn6_v1_chr2_+_187288644_187288644	0.182616	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000035271|mrpl24|ENSRNOG00000022234|mitochondrial ribosomal protein L24 [Source:RGD Symbol%3BAcc:1359289]
rn6_v1_chr5_+_135562034_135562034	0.181686	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000056967|Ccdc163|ENSRNOG00000022953|coiled-coil domain containing 163 [Source:RGD Symbol%3BAcc:1564486]
rn6_v1_chr1_-_63293635_63293635	0.181424	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090337|Zik1|ENSRNOG00000055843|zinc finger protein interacting with K protein 1 [Source:RGD Symbol%3BAcc:1590949]
rn6_v1_chr8_-_61823102_61823102	0.180781	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000058645|Neil1|ENSRNOG00000018577|nei-like DNA glycosylase 1 [Source:RGD Symbol%3BAcc:1306077]
rn6_v1_chr5_+_78120607_78120607	0.180103	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019379|Slc31a2|ENSRNOG00000013631|solute carrier family 31 member 2 [Source:RGD Symbol%3BAcc:1307963]
rn6_v1_chr15_-_83494423_83494423	0.179873	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000037588|Dis3|ENSRNOG00000009125|DIS3 homolog%2C exosome endoribonuclease and 3'-5' exoribonuclease [Source:RGD Symbol%3BAcc:1304646]
rn6_v1_chr9_+_15513063_15513063	0.179362	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020499|Taf8|ENSRNOG00000015249|TATA-box binding protein associated factor 8 [Source:RGD Symbol%3BAcc:1308423]
rn6_v1_chr6_+_18821815_18821815	0.178849	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000062057|Mtm1|ENSRNOG00000002516|myotubularin 1 [Source:RGD Symbol%3BAcc:1304582]
rn6_v1_chr2_+_203301838_203301838	0.178141	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043146|Trim45|ENSRNOG00000015347|tripartite motif-containing 45 [Source:RGD Symbol%3BAcc:1309168]
rn6_v1_chr2_-_211001258_211001258	0.177482	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000037336|Atxn7l2|ENSRNOG00000028749|ataxin 7-like 2 [Source:RGD Symbol%3BAcc:1307047]
rn6_v1_chr1_-_100359511_100359511	0.176325	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000056420|RGD1309036|ENSRNOG00000037298|hypothetical LOC292874 [Source:RGD Symbol%3BAcc:1309036]
rn6_v1_chr17_-_90756048_90756048	0.174524	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085669|Ero1b|ENSRNOG00000002609|endoplasmic reticulum oxidoreductase 1 beta [Source:RGD Symbol%3BAcc:1563548]
rn6_v1_chr12_+_2069959_2069959	0.174283	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001298|Pnpla6|ENSRNOG00000000977|patatin-like phospholipase domain containing 6 [Source:RGD Symbol%3BAcc:1564611]
rn6_v1_chr8_+_50139997_50139997	0.172898	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022796|Bace1|ENSRNOG00000016847|beta-secretase 1 [Source:RGD Symbol%3BAcc:2191]
rn6_v1_chr2_+_54897424_54897424	0.172097	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017665|Ttc33|ENSRNOG00000013217|tetratricopeptide repeat domain 33 [Source:RGD Symbol%3BAcc:1564042]
rn6_v1_chr7_-_142132173_142132173	0.171086	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026613|Csrnp2|ENSRNOG00000019653|cysteine and serine rich nuclear protein 2 [Source:RGD Symbol%3BAcc:1308916]
rn6_v1_chr8_-_72714664_72714664	0.170654	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024286|Rab8b|ENSRNOG00000018009|RAB8B%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:628764]
rn6_v1_chr1_+_220307394_220307394	0.170372	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071891|LOC108348052|ENSRNOG00000050201|equilibrative nucleoside transporter 2 [Source:RGD Symbol%3BAcc:11407640]
rn6_v1_chr3_+_57646811_57646811	0.170267	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031463|Dcaf17|ENSRNOG00000009403|DDB1 and CUL4 associated factor 17 [Source:RGD Symbol%3BAcc:1565551]
rn6_v1_chr4_+_113890509_113890509	0.166807	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011002|Dqx1|ENSRNOG00000008062|DEAQ box RNA-dependent ATPase 1 [Source:RGD Symbol%3BAcc:1591766]
rn6_v1_chr5_-_142681173_142681173	0.164577	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009882|Utp11|ENSRNOG00000007174|UTP11%2C small subunit processome component homolog (S. cerevisiae) [Source:RGD Symbol%3BAcc:621412]
rn6_v1_chr2_+_189615948_189615948	0.164423	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092144|Crtc2|ENSRNOG00000056337|CREB regulated transcription coactivator 2 [Source:RGD Symbol%3BAcc:1308903]
rn6_v1_chr1_+_69841998_69841998	0.163043	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072231|Zfp773-ps1|ENSRNOG00000047061|zinc finger protein 773%2C pseudogene 1 [Source:RGD Symbol%3BAcc:1563793]
rn6_v1_chr3_+_148722955_148722955	0.162171	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013730|Pofut1|ENSRNOG00000010104|protein O-fucosyltransferase 1 [Source:RGD Symbol%3BAcc:1303001]
rn6_v1_chr14_-_114484127_114484127	0.161966	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000056706|Eml6|ENSRNOG00000037462|echinoderm microtubule associated protein like 6 [Source:RGD Symbol%3BAcc:1561672]
rn6_v1_chr17_-_66295014_66295014	0.159778	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023974|Mtr|ENSRNOG00000017593|5-methyltetrahydrofolate-homocysteine methyltransferase [Source:RGD Symbol%3BAcc:621283]
rn6_v1_chr6_+_129609074_129609074	0.159161	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064957|Papola|ENSRNOG00000004827|poly (A) polymerase alpha [Source:RGD Symbol%3BAcc:1308673]
rn6_v1_chr1_-_81152384_81152384	0.158336	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026263|Zfp94|ENSRNOG00000019416|zinc finger protein 94 [Source:RGD Symbol%3BAcc:1560430]	ENSRNOT00000077305|Zfp94|ENSRNOG00000019416|zinc finger protein 94 [Source:RGD Symbol%3BAcc:1560430]
rn6_v1_chr3_+_147713821_147713821	0.158152	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007558|Csnk2a1|ENSRNOG00000005276|casein kinase 2 alpha 1 [Source:RGD Symbol%3BAcc:621663]
rn6_v1_chr8_-_79660439_79660439	0.157275	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089949|Ccpg1os|ENSRNOG00000052869|cell cycle progression 1%2C opposite strand [Source:RGD Symbol%3BAcc:1594626]
rn6_v1_chr7_+_70364813_70364813	0.157002	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084012|Agap2|ENSRNOG00000025584|ArfGAP with GTPase domain%2C ankyrin repeat and PH domain 2 [Source:RGD Symbol%3BAcc:628844]	ENSRNOT00000031230|Agap2|ENSRNOG00000025584|ArfGAP with GTPase domain%2C ankyrin repeat and PH domain 2 [Source:RGD Symbol%3BAcc:628844]
rn6_v1_chr1_+_69615434_69615434	0.156799	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020751|Zfp418|ENSRNOG00000015271|zinc finger protein 418 [Source:RGD Symbol%3BAcc:1311663]
rn6_v1_chr9_+_82632230_82632230	0.156041	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085165|Gmppa|ENSRNOG00000019946|GDP-mannose pyrophosphorylase A [Source:RGD Symbol%3BAcc:1560644]
rn6_v1_chr13_-_98078946_98078946	0.155856	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000035875|Ahctf1|ENSRNOG00000023541|AT hook containing transcription factor 1 [Source:RGD Symbol%3BAcc:1561291]
rn6_v1_chr7_+_73270455_73270455	0.154224	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007190|Pop1|ENSRNOG00000005243|POP1 homolog%2C ribonuclease P/MRP subunit [Source:RGD Symbol%3BAcc:1308609]
rn6_v1_chr1_+_100992405_100992405	0.153203	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027786|Irf3|ENSRNOG00000043388|interferon regulatory factor 3 [Source:RGD Symbol%3BAcc:1549774]
rn6_v1_chr11_-_25078740_25078740	0.152415	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002109|Cyyr1|ENSRNOG00000001544|cysteine and tyrosine rich 1 [Source:RGD Symbol%3BAcc:1359578]
rn6_v1_chr6_+_129609375_129609375	0.151939	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083732|Papola|ENSRNOG00000004827|poly (A) polymerase alpha [Source:RGD Symbol%3BAcc:1308673]
rn6_v1_chr14_-_81339526_81339526	0.151025	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015894|Grk4|ENSRNOG00000011847|G protein-coupled receptor kinase 4 [Source:RGD Symbol%3BAcc:61858]
rn6_v1_chr12_+_2070365_2070365	0.150965	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072952|Pnpla6|ENSRNOG00000000977|patatin-like phospholipase domain containing 6 [Source:RGD Symbol%3BAcc:1564611]
rn6_v1_chr2_+_188844073_188844073	0.150794	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028117|Kcnn3|ENSRNOG00000020706|potassium calcium-activated channel subfamily N member 3 [Source:RGD Symbol%3BAcc:2964]
rn6_v1_chrX_-_64908682_64908682	0.150357	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084107|Zc4h2|ENSRNOG00000056735|zinc finger C4H2-type containing [Source:RGD Symbol%3BAcc:1561708]
rn6_v1_chr19_+_25181564_25181564	0.149761	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008104|Rfx1|ENSRNOG00000006049|regulatory factor X1 [Source:RGD Symbol%3BAcc:1306574]
rn6_v1_chr1_+_101884276_101884276	0.147556	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082917|Tmem143|ENSRNOG00000021096|transmembrane protein 143 [Source:RGD Symbol%3BAcc:1305013]
rn6_v1_chr10_-_88619537_88619537	0.14733	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000055250|Kat2a|ENSRNOG00000018364|lysine acetyltransferase 2A [Source:RGD Symbol%3BAcc:1307242]
rn6_v1_chr4_+_61420009_61420010	0.145282	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082175|Lrguk|ENSRNOG00000008775|leucine-rich repeats and guanylate kinase domain containing [Source:RGD Symbol%3BAcc:1308226]	ENSRNOT00000011692|Lrguk|ENSRNOG00000008775|leucine-rich repeats and guanylate kinase domain containing [Source:RGD Symbol%3BAcc:1308226]
rn6_v1_chr8_-_122987191_122987191	0.144541	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033976|Gpd1l|ENSRNOG00000026455|glycerol-3-phosphate dehydrogenase 1-like [Source:RGD Symbol%3BAcc:1560123]
rn6_v1_chr10_-_82027119_82027119	0.144393	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003914|Luc7l3|ENSRNOG00000002835|LUC7-like 3 pre-mRNA splicing factor [Source:RGD Symbol%3BAcc:1307981]
rn6_v1_chr4_+_118243132_118243132	0.144324	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023654|RGD1306746|ENSRNOG00000017380|similar to Hypothetical protein MGC25529 [Source:RGD Symbol%3BAcc:1306746]
rn6_v1_chr4_-_153078604_153078604	0.144134	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015090|Cecr5|ENSRNOG00000011338|cat eye syndrome chromosome region%2C candidate 5 [Source:RGD Symbol%3BAcc:1306557]
rn6_v1_chr1_+_198298138_198298138	0.143923	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000039964|Hirip3|ENSRNOG00000029061|HIRA interacting protein 3 [Source:RGD Symbol%3BAcc:1306463]
rn6_v1_chr2_+_243422811_243422811	0.143212	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014694|Trmt10a|ENSRNOG00000011025|tRNA methyltransferase 10A [Source:RGD Symbol%3BAcc:1594565]
rn6_v1_chr11_+_71959228_71959228	0.139864	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000049862|Pak2|ENSRNOG00000001747|p21 (RAC1) activated kinase 2 [Source:RGD Symbol%3BAcc:61953]
rn6_v1_chr10_-_57606171_57606171	0.139718	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009015|Nup88|ENSRNOG00000006126|nucleoporin 88 [Source:RGD Symbol%3BAcc:620182]
rn6_v1_chr14_-_115391652_115391652	0.139238	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002094|Chac2|ENSRNOG00000001531|ChaC cation transport regulator 2 [Source:RGD Symbol%3BAcc:1309120]
rn6_v1_chr9_-_100779715_100779715	0.139132	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024487|Stk25|ENSRNOG00000018181|serine/threonine kinase 25 [Source:RGD Symbol%3BAcc:727809]
rn6_v1_chr3_-_13824870_13824870	0.138211	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066961|Gapvd1|ENSRNOG00000017925|GTPase activating protein and VPS9 domains 1 [Source:RGD Symbol%3BAcc:1307479]
rn6_v1_chr7_-_2986935_2987055	0.137916	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081125|Pa2g4|ENSRNOG00000004904|proliferation-associated 2G4 [Source:RGD Symbol%3BAcc:1302994]	ENSRNOT00000006578|Pa2g4|ENSRNOG00000004904|proliferation-associated 2G4 [Source:RGD Symbol%3BAcc:1302994]
rn6_v1_chr16_+_21061237_21061237	0.137307	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092136|Ncan|ENSRNOG00000048036|neurocan [Source:RGD Symbol%3BAcc:619941]
rn6_v1_chrX_+_73390903_73390903	0.135021	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077002|Zfp449|ENSRNOG00000050562|zinc finger protein 449 [Source:RGD Symbol%3BAcc:1584453]
rn6_v1_chr1_-_261051498_261051498	0.134609	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071417|Arhgap19|ENSRNOG00000048166|Rho GTPase activating protein 19 [Source:RGD Symbol%3BAcc:1593044]
rn6_v1_chr1_-_165530095_165530095	0.13378	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024256|Dnajb13|ENSRNOG00000017975|DnaJ heat shock protein family (Hsp40) member B13 [Source:RGD Symbol%3BAcc:1359131]
rn6_v1_chr6_+_2808841_2808841	0.133452	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009221|Galm|ENSRNOG00000007023|galactose mutarotase [Source:RGD Symbol%3BAcc:1359459]
rn6_v1_chr1_+_87790104_87790104	0.13278	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074580|LOC103690114|ENSRNOG00000020774|zinc finger protein 383-like [Source:RGD Symbol%3BAcc:9160828]
rn6_v1_chr3_+_62648447_62648447	0.1319	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002111|Agps|ENSRNOG00000001547|alkylglycerone phosphate synthase [Source:RGD Symbol%3BAcc:620364]
rn6_v1_chr3_+_176865156_176865156	0.130381	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019084|Zgpat|ENSRNOG00000014235|zinc finger CCCH-type and G-patch domain containing [Source:RGD Symbol%3BAcc:1310801]
rn6_v1_chr3_-_163814799_163814799	0.129659	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000055127|Znfx1|ENSRNOG00000008194|zinc finger%2C NFX1-type containing 1 [Source:RGD Symbol%3BAcc:1306344]
rn6_v1_chr12_-_47987255_47987255	0.127184	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074000|Ube3b|ENSRNOG00000047219|ubiquitin protein ligase E3B [Source:RGD Symbol%3BAcc:1583074]
rn6_v1_chr10_-_66482150_66482150	0.126543	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000048407|Ksr1|ENSRNOG00000012818|kinase suppressor of ras 1 [Source:RGD Symbol%3BAcc:1308105]
rn6_v1_chr5_-_113578928_113578928	0.126318	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010621|Plaa|ENSRNOG00000007753|phospholipase A2%2C activating protein [Source:RGD Symbol%3BAcc:621245]
rn6_v1_chr18_-_74198369_74198369	0.125608	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073597|LOC108348136|ENSRNOG00000046666|HAUS augmin-like complex subunit 1 [Source:RGD Symbol%3BAcc:11389303]
rn6_v1_chr9_+_82632384_82632384	0.12537	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027064|Gmppa|ENSRNOG00000019946|GDP-mannose pyrophosphorylase A [Source:RGD Symbol%3BAcc:1560644]
rn6_v1_chr1_-_69743616_69743616	0.124916	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030259|Zfp772|ENSRNOG00000015598|zinc finger protein 772 [Source:RGD Symbol%3BAcc:1308782]
rn6_v1_chr13_+_44475970_44475973	0.124706	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024602|Ccnt2|ENSRNOG00000017113|cyclin T2 [Source:RGD Symbol%3BAcc:1309205]	ENSRNOT00000091645|Ccnt2|ENSRNOG00000017113|cyclin T2 [Source:RGD Symbol%3BAcc:1309205]
rn6_v1_chr6_+_135313008_135313008	0.123765	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030864|Tecpr2|ENSRNOG00000021904|tectonin beta-propeller repeat containing 2 [Source:RGD Symbol%3BAcc:1307503]
rn6_v1_chr5_+_9230984_9230984	0.123606	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009136|Vcpip1|ENSRNOG00000006980|valosin containing protein interacting protein 1 [Source:RGD Symbol%3BAcc:708520]
rn6_v1_chr8_-_118651238_118651238	0.122495	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000056145|Ptpn23|ENSRNOG00000020862|protein tyrosine phosphatase%2C non-receptor type 23 [Source:RGD Symbol%3BAcc:619892]
rn6_v1_chr7_+_54756043_54756043	0.122028	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000063917|Krr1|ENSRNOG00000004035|KRR1%2C small subunit processome component homolog [Source:RGD Symbol%3BAcc:1306183]
rn6_v1_chr5_+_144106802_144106868	0.12117	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000035637|Lsm10|ENSRNOG00000025716|LSM10%2C U7 small nuclear RNA associated [Source:RGD Symbol%3BAcc:1584914]	ENSRNOT00000079779|Lsm10|ENSRNOG00000025716|LSM10%2C U7 small nuclear RNA associated [Source:RGD Symbol%3BAcc:1584914]
rn6_v1_chr4_+_100465170_100465170	0.121152	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019571|Retsat|ENSRNOG00000014090|retinol saturase [Source:RGD Symbol%3BAcc:628802]
rn6_v1_chr13_+_69135128_69135128	0.121026	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017858|Edem3|ENSRNOG00000028358|ER degradation enhancing alpha-mannosidase like protein 3 [Source:RGD Symbol%3BAcc:1561496]
rn6_v1_chr3_-_140728129_140728129	0.120488	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015637|Ralgapa2|ENSRNOG00000036964|Ral GTPase activating protein catalytic alpha subunit 2 [Source:RGD Symbol%3BAcc:1308023]
rn6_v1_chr13_+_67611708_67611708	0.120417	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000063833|Tpr|ENSRNOG00000002394|translocated promoter region%2C nuclear basket protein [Source:RGD Symbol%3BAcc:1310664]
rn6_v1_chr17_-_48810991_48810991	0.120012	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000067636|Vps41|ENSRNOG00000012940|VPS41 HOPS complex subunit [Source:RGD Symbol%3BAcc:1560511]
rn6_v1_chr10_-_59764868_59764868	0.118897	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030343|Ctns|ENSRNOG00000028688|cystinosin%2C lysosomal cystine transporter [Source:RGD Symbol%3BAcc:1308466]
rn6_v1_chr10_+_17421075_17421075	0.117432	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000047011|Stk10|ENSRNOG00000004217|serine/threonine kinase 10 [Source:RGD Symbol%3BAcc:3779]
rn6_v1_chr16_+_24978527_24978527	0.116622	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019363|Tma16|ENSRNOG00000014188|translation machinery associated 16 homolog [Source:RGD Symbol%3BAcc:1305222]
rn6_v1_chrX_+_158835811_158835811	0.116601	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071888|Ints6l|ENSRNOG00000046662|integrator complex subunit 6 like [Source:MGI Symbol%3BAcc:MGI:2442593]	ENSRNOT00000080110|Ints6l|ENSRNOG00000046662|integrator complex subunit 6 like [Source:MGI Symbol%3BAcc:MGI:2442593]
rn6_v1_chr1_-_68269117_68269117	0.115852	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072367|LOC100911224|ENSRNOG00000046455|zinc finger protein interacting with ribonucleoprotein K-like [Source:RGD Symbol%3BAcc:6494420]
rn6_v1_chr19_+_9622611_9622611	0.115837	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061498|Slc38a7|ENSRNOG00000012007|solute carrier family 38%2C member 7 [Source:RGD Symbol%3BAcc:1303268]
rn6_v1_chr19_-_43714418_43714418	0.11561	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000047179|Wdr59|ENSRNOG00000018967|WD repeat domain 59 [Source:RGD Symbol%3BAcc:1592213]
rn6_v1_chr9_-_65763273_65763273	0.115402	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015034|Trak2|ENSRNOG00000010881|trafficking kinesin protein 2 [Source:RGD Symbol%3BAcc:620915]
rn6_v1_chr4_-_98593664_98593664	0.115385	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007927|Rpia|ENSRNOG00000005576|ribose 5-phosphate isomerase A [Source:RGD Symbol%3BAcc:1311377]
rn6_v1_chr18_-_74151950_74151950	0.114381	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023101|Haus1|ENSRNOG00000017067|HAUS augmin-like complex%2C subunit 1 [Source:RGD Symbol%3BAcc:619909]
rn6_v1_chr10_+_14492844_14492844	0.114177	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023615|Clcn7|ENSRNOG00000016976|chloride voltage-gated channel 7 [Source:RGD Symbol%3BAcc:61836]
rn6_v1_chr4_+_594882_594882	0.114168	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033377|Rbm33|ENSRNOG00000006718|RNA binding motif protein 33 [Source:RGD Symbol%3BAcc:1310651]
rn6_v1_chr9_+_98621506_98621610	0.113905	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000056612|Traf3ip1|ENSRNOG00000024468|TRAF3 interacting protein 1 [Source:RGD Symbol%3BAcc:1309252]	ENSRNOT00000081992|Traf3ip1|ENSRNOG00000024468|TRAF3 interacting protein 1 [Source:RGD Symbol%3BAcc:1309252]
rn6_v1_chr19_-_33080998_33080998	0.113201	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015985|Slc10a7|ENSRNOG00000011991|solute carrier family 10%2C member 7 [Source:RGD Symbol%3BAcc:1564388]
rn6_v1_chr6_+_26560601_26560601	0.112694	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077481|Gtf3c2|ENSRNOG00000056904|general transcription factor IIIC subunit 2 [Source:RGD Symbol%3BAcc:1560392]
rn6_v1_chr11_+_87381899_87381899	0.11214	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002554|Lztr1|ENSRNOG00000001870|leucine-zipper-like transcription regulator 1 [Source:RGD Symbol%3BAcc:1309100]
rn6_v1_chr18_+_68983545_68983545	0.112	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085317|Stard6|ENSRNOG00000026324|StAR-related lipid transfer domain containing 6 [Source:RGD Symbol%3BAcc:1359639]
rn6_v1_chr6_-_107325345_107325345	0.111705	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000049481|Numb|ENSRNOG00000009653|NUMB%2C endocytic adaptor protein [Source:RGD Symbol%3BAcc:620107]	ENSRNOT00000042594|Numb|ENSRNOG00000009653|NUMB%2C endocytic adaptor protein [Source:RGD Symbol%3BAcc:620107]	ENSRNOT00000013026|Numb|ENSRNOG00000009653|NUMB%2C endocytic adaptor protein [Source:RGD Symbol%3BAcc:620107]
rn6_v1_chr13_-_70980913_70980913	0.111063	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003713|Npl|ENSRNOG00000002775|N-acetylneuraminate pyruvate lyase [Source:RGD Symbol%3BAcc:1549702]
rn6_v1_chr20_+_6205903_6205990	0.110592	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092333|Kctd20|ENSRNOG00000000517|potassium channel tetramerization domain containing 20 [Source:RGD Symbol%3BAcc:1309887]	ENSRNOT00000092655|Kctd20|ENSRNOG00000000517|potassium channel tetramerization domain containing 20 [Source:RGD Symbol%3BAcc:1309887]
rn6_v1_chr7_-_142300382_142300382	0.110295	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000048262|Bin2|ENSRNOG00000031930|bridging integrator 2 [Source:RGD Symbol%3BAcc:1306789]
rn6_v1_chr6_-_26875376_26875376	0.109934	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011838|Tmem214|ENSRNOG00000008812|transmembrane protein 214 [Source:RGD Symbol%3BAcc:1311324]
rn6_v1_chr7_+_35070284_35070284	0.109617	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009578|Nr2c1|ENSRNOG00000006983|nuclear receptor subfamily 2%2C group C%2C member 1 [Source:RGD Symbol%3BAcc:3200]
rn6_v1_chr6_-_51257625_51257625	0.109492	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012004|Hbp1|ENSRNOG00000008927|HMG-box transcription factor 1 [Source:RGD Symbol%3BAcc:620444]
rn6_v1_chrX_+_15113878_15113878	0.109286	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007464|Wdr13|ENSRNOG00000039587|WD repeat domain 13 [Source:RGD Symbol%3BAcc:1560982]
rn6_v1_chrX_+_20484517_20484517	0.108529	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000093701|FAM120C|ENSRNOG00000062231|family with sequence similarity 120C [Source:RGD Symbol%3BAcc:1564253]
rn6_v1_chr8_+_23492621_23492621	0.108386	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000093071|Bbs9|ENSRNOG00000015189|Bardet-Biedl syndrome 9 [Source:RGD Symbol%3BAcc:1308472]
rn6_v1_chr3_+_148438939_148438939	0.108035	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064196|Ttll9|ENSRNOG00000008596|tubulin tyrosine ligase like 9 [Source:RGD Symbol%3BAcc:1359622]
rn6_v1_chr16_-_19097329_19097329	0.107934	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030617|RGD1311847|ENSRNOG00000023700|similar to 1700030K09Rik protein [Source:RGD Symbol%3BAcc:1311847]
rn6_v1_chr18_+_27424328_27424328	0.107505	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033784|Kif20a|ENSRNOG00000024428|kinesin family member 20A [Source:RGD Symbol%3BAcc:1307695]
rn6_v1_chr19_-_37675077_37675077	0.107318	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031033|Enkd1|ENSRNOG00000024364|enkurin domain containing 1 [Source:RGD Symbol%3BAcc:1307357]
rn6_v1_chr13_-_79801368_79801369	0.106107	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075998|Suco|ENSRNOG00000026542|SUN domain containing ossification factor [Source:RGD Symbol%3BAcc:735185]	ENSRNOT00000084058|Suco|ENSRNOG00000026542|SUN domain containing ossification factor [Source:RGD Symbol%3BAcc:735185]
rn6_v1_chr10_-_46783889_46783889	0.105923	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004948|Atpaf2|ENSRNOG00000003719|ATP synthase mitochondrial F1 complex assembly factor 2 [Source:RGD Symbol%3BAcc:1305161]
rn6_v1_chr8_-_96088364_96088405	0.105688	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086161|Snx14|ENSRNOG00000011348|sorting nexin 14 [Source:RGD Symbol%3BAcc:1310921]	ENSRNOT00000056818|Snx14|ENSRNOG00000011348|sorting nexin 14 [Source:RGD Symbol%3BAcc:1310921]
rn6_v1_chr14_+_106393959_106393959	0.105642	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092168|Wdpcp|ENSRNOG00000054331|WD repeat containing planar cell polarity effector [Source:RGD Symbol%3BAcc:1309501]
rn6_v1_chrX_-_84821775_84821775	0.105155	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000174|Chm|ENSRNOG00000000161|CHM%2C Rab escort protein 1 [Source:RGD Symbol%3BAcc:2340]
rn6_v1_chr9_+_38396449_38396449	0.104737	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017022|Zfp451|ENSRNOG00000012718|zinc finger protein 451 [Source:RGD Symbol%3BAcc:1305865]
rn6_v1_chr17_-_54070399_54070399	0.104395	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022924|B3galnt2|ENSRNOG00000016855|beta-1%2C3-N-acetylgalactosaminyltransferase 2 [Source:RGD Symbol%3BAcc:1306946]
rn6_v1_chr13_-_110784209_110784209	0.103018	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071698|Traf5|ENSRNOG00000047957|TNF receptor-associated factor 5 [Source:RGD Symbol%3BAcc:1593883]
rn6_v1_chr5_-_150609352_150609352	0.102472	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074374|Phactr4|ENSRNOG00000046922|phosphatase and actin regulator 4 [Source:RGD Symbol%3BAcc:1592823]
rn6_v1_chr7_-_53714879_53714879	0.102112	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005078|Zdhhc17|ENSRNOG00000003803|zinc finger%2C DHHC-type containing 17 [Source:RGD Symbol%3BAcc:1595790]
rn6_v1_chr1_+_80920747_80920747	0.101982	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026077|Zfp180|ENSRNOG00000029336|zinc finger protein 180 [Source:RGD Symbol%3BAcc:631380]
rn6_v1_chr16_+_21132147_21132147	0.101808	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084243|Mau2|ENSRNOG00000020526|MAU2 sister chromatid cohesion factor [Source:RGD Symbol%3BAcc:1308759]	ENSRNOT00000027846|Mau2|ENSRNOG00000020526|MAU2 sister chromatid cohesion factor [Source:RGD Symbol%3BAcc:1308759]
rn6_v1_chr7_-_97902585_97902585	0.101527	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008382|RGD1310852|ENSRNOG00000006370|similar to RIKEN cDNA 9130401M01 [Source:RGD Symbol%3BAcc:1310852]
rn6_v1_chr5_+_58667885_58667885	0.101394	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064755|Unc13b|ENSRNOG00000008237|unc-13 homolog B [Source:RGD Symbol%3BAcc:619723]
rn6_v1_chr13_-_90832469_90832469	0.101327	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086508|Igsf9|ENSRNOG00000008054|immunoglobulin superfamily%2C member 9 [Source:RGD Symbol%3BAcc:1304566]
rn6_v1_chr4_+_7260575_7260575	0.101143	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064893|Fastk|ENSRNOG00000011667|Fas-activated serine/threonine kinase [Source:RGD Symbol%3BAcc:1311601]
rn6_v1_chr8_-_94922017_94922017	0.100686	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083934|Cep162|ENSRNOG00000010608|centrosomal protein 162 [Source:RGD Symbol%3BAcc:1307365]
rn6_v1_chr2_-_195821608_195821608	0.100394	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028389|Snx27|ENSRNOG00000020893|sorting nexin family member 27 [Source:RGD Symbol%3BAcc:628705]	ENSRNOT00000071442|Snx27|ENSRNOG00000020893|sorting nexin family member 27 [Source:RGD Symbol%3BAcc:628705]
rn6_v1_chr20_+_20236151_20236151	0.0996459	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079630|Ank3|ENSRNOG00000053288|ankyrin 3 [Source:RGD Symbol%3BAcc:620157]
rn6_v1_chr8_-_128622314_128622337	0.0989413	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084950|Gorasp1|ENSRNOG00000018047|golgi reassembly stacking protein 1 [Source:RGD Symbol%3BAcc:621122]	ENSRNOT00000024408|Gorasp1|ENSRNOG00000018047|golgi reassembly stacking protein 1 [Source:RGD Symbol%3BAcc:621122]
rn6_v1_chr1_+_174655939_174655939	0.0988419	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014002|Ipo7|ENSRNOG00000010427|importin 7 [Source:RGD Symbol%3BAcc:1310849]
rn6_v1_chr4_+_57050214_57050214	0.0988326	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025165|Ahcyl2|ENSRNOG00000039300|adenosylhomocysteinase-like 2 [Source:RGD Symbol%3BAcc:1564895]
rn6_v1_chr8_-_97647072_97647072	0.0980529	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030645|Tbc1d2b|ENSRNOG00000014543|TBC1 domain family%2C member 2B [Source:RGD Symbol%3BAcc:1307436]
rn6_v1_chr7_-_117703094_117703094	0.0978515	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019754|Tonsl|ENSRNOG00000014703|tonsoku-like%2C DNA repair protein [Source:RGD Symbol%3BAcc:1307483]
rn6_v1_chr4_+_168976859_168976859	0.0977709	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000068663|Fam234b|ENSRNOG00000008443|family with sequence similarity 234%2C member B [Source:RGD Symbol%3BAcc:1306151]
rn6_v1_chr4_+_130172727_130172727	0.0956679	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000051121|Mitf|ENSRNOG00000008658|melanogenesis associated transcription factor [Source:RGD Symbol%3BAcc:3092]
rn6_v1_chrX_+_21063562_21063562	0.0954461	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000045708|Phf8|ENSRNOG00000002708|PHD finger protein 8 [Source:RGD Symbol%3BAcc:1561065]
rn6_v1_chr7_-_11319516_11319516	0.0948402	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027784|Apba3|ENSRNOG00000020466|amyloid beta precursor protein binding family A member 3 [Source:RGD Symbol%3BAcc:620846]
rn6_v1_chr19_-_17346808_17346808	0.0937583	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017361|Rbl2|ENSRNOG00000012153|RB transcriptional corepressor like 2 [Source:RGD Symbol%3BAcc:3541]
rn6_v1_chr8_+_48805684_48805684	0.0936488	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064041|Bcl9l|ENSRNOG00000012420|B-cell CLL/lymphoma 9-like [Source:RGD Symbol%3BAcc:1309096]
rn6_v1_chr3_-_148722710_148722742	0.0933472	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090919|Plagl2|ENSRNOG00000010086|PLAG1 like zinc finger 2 [Source:RGD Symbol%3BAcc:1307999]	ENSRNOT00000068592|Plagl2|ENSRNOG00000010086|PLAG1 like zinc finger 2 [Source:RGD Symbol%3BAcc:1307999]
rn6_v1_chr10_-_36372436_36372436	0.0929217	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000039827|Znf454|ENSRNOG00000022971|zinc finger protein 454 [Source:RGD Symbol%3BAcc:7529496]
rn6_v1_chr2_-_232117134_232117134	0.0924798	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030798|Alpk1|ENSRNOG00000022636|alpha-kinase 1 [Source:RGD Symbol%3BAcc:1304613]
rn6_v1_chr3_+_98297554_98297554	0.0924696	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006524|Kcna4|ENSRNOG00000004918|potassium voltage-gated channel subfamily A member 4 [Source:RGD Symbol%3BAcc:2952]
rn6_v1_chr11_+_87224421_87224421	0.0921131	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000308|Dgcr14|ENSRNOG00000000283|DiGeorge syndrome critical region gene 14 [Source:RGD Symbol%3BAcc:1308218]
rn6_v1_chr3_-_138708332_138708332	0.0915879	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010678|Rbbp9|ENSRNOG00000007972|RB binding protein 9%2C serine hydrolase [Source:RGD Symbol%3BAcc:3542]
rn6_v1_chr4_-_64831233_64831233	0.0906885	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079285|Dgki|ENSRNOG00000026705|diacylglycerol kinase%2C iota [Source:RGD Symbol%3BAcc:735049]
rn6_v1_chr6_+_18877907_18877907	0.0906801	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084222|Alkbh8|ENSRNOG00000024525|alkB homolog 8%2C tRNA methyltransferase [Source:RGD Symbol%3BAcc:1304687]
rn6_v1_chr1_-_101086198_101086198	0.0906239	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027917|Rcn3|ENSRNOG00000043007|reticulocalbin 3 [Source:RGD Symbol%3BAcc:1359365]
rn6_v1_chr1_-_83993270_83993270	0.0899201	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002050|Mia|ENSRNOG00000001499|melanoma inhibitory activity [Source:RGD Symbol%3BAcc:620883]
rn6_v1_chr8_-_13835168_13835168	0.0896198	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014435|Med17|ENSRNOG00000010496|mediator complex subunit 17 [Source:RGD Symbol%3BAcc:1311120]
rn6_v1_chr2_+_196304492_196304492	0.0884269	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028640|Lysmd1|ENSRNOG00000021099|LysM domain containing 1 [Source:RGD Symbol%3BAcc:1561865]
rn6_v1_chr4_+_2505909_2505909	0.0875379	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092756|Ube3c|ENSRNOG00000010702|ubiquitin protein ligase E3C [Source:RGD Symbol%3BAcc:1559986]
rn6_v1_chr7_-_124929025_124929025	0.0868099	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015447|Efcab6|ENSRNOG00000011094|EF-hand calcium binding domain 6 [Source:RGD Symbol%3BAcc:1309065]
rn6_v1_chr12_-_23574125_23574125	0.086499	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001939|Alkbh4|ENSRNOG00000001428|alkB homolog 4%2C lysine demethylase [Source:RGD Symbol%3BAcc:1308608]
rn6_v1_chr3_+_138398011_138398011	0.086249	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000038865|Mgme1|ENSRNOG00000028196|mitochondrial genome maintenance exonuclease 1 [Source:RGD Symbol%3BAcc:1307465]
rn6_v1_chr7_+_66595742_66595742	0.0860338	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031191|Usp15|ENSRNOG00000023202|ubiquitin specific peptidase 15 [Source:RGD Symbol%3BAcc:628795]
rn6_v1_chr10_-_86645529_86645529	0.0859614	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011947|Med24|ENSRNOG00000008711|mediator complex subunit 24 [Source:RGD Symbol%3BAcc:1564565]
rn6_v1_chr1_+_75356220_75356220	0.085827	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019799|Lig1|ENSRNOG00000014193|DNA ligase 1 [Source:RGD Symbol%3BAcc:621424]
rn6_v1_chr5_+_145138697_145138697	0.0852808	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019135|Zmym6|ENSRNOG00000013865|zinc finger MYM-type containing 6 [Source:RGD Symbol%3BAcc:1561833]
rn6_v1_chr1_+_42169501_42169501	0.0850239	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025477|Vip|ENSRNOG00000018808|vasoactive intestinal peptide [Source:RGD Symbol%3BAcc:621647]	ENSRNOT00000092791|Vip|ENSRNOG00000018808|vasoactive intestinal peptide [Source:RGD Symbol%3BAcc:621647]
rn6_v1_chr8_+_116657371_116657371	0.0849793	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024966|Mon1a|ENSRNOG00000018502|MON1 homolog A%2C secretory trafficking associated [Source:RGD Symbol%3BAcc:1308823]
rn6_v1_chr17_-_27279260_27279260	0.0844748	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000018508|Snrnp48|ENSRNOG00000013756|small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:RGD Symbol%3BAcc:1309020]
rn6_v1_chr4_+_62299044_62299044	0.0842597	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032077|Agbl3|ENSRNOG00000010397|ATP/GTP binding protein-like 3 [Source:RGD Symbol%3BAcc:1561995]
rn6_v1_chr3_-_111560556_111560556	0.0841817	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030532|Ltk|ENSRNOG00000025130|leukocyte receptor tyrosine kinase [Source:RGD Symbol%3BAcc:1309323]
rn6_v1_chr11_+_45401403_45401403	0.0838837	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002240|Tbc1d23|ENSRNOG00000001642|TBC1 domain family%2C member 23 [Source:RGD Symbol%3BAcc:1307925]
rn6_v1_chr9_-_91100482_91100482	0.0837002	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064642|LOC100911860|ENSRNOG00000049962|ubiquitin carboxyl-terminal hydrolase 40-like [Source:RGD Symbol%3BAcc:6490066]
rn6_v1_chr3_+_103866144_103866144	0.0833031	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007688|NEWGENE_1582771|ENSRNOG00000005814|katanin regulatory subunit B1 like 1 [Source:RGD Symbol%3BAcc:11483591]
rn6_v1_chr20_+_48503973_48503973	0.0831833	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064081|Cdc40|ENSRNOG00000000581|cell division cycle 40 [Source:RGD Symbol%3BAcc:1307063]
rn6_v1_chr10_+_94988362_94988362	0.0831018	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066525|Cep95|ENSRNOG00000014354|centrosomal protein 95 [Source:RGD Symbol%3BAcc:1309655]
rn6_v1_chr1_-_197982601_197982601	0.0830203	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025782|Eif3c|ENSRNOG00000018761|eukaryotic translation initiation factor 3%2C subunit C [Source:RGD Symbol%3BAcc:1308871]
rn6_v1_chr17_-_70234103_70234103	0.0829699	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024200|Asb13|ENSRNOG00000017967|ankyrin repeat and SOCS box-containing 13 [Source:RGD Symbol%3BAcc:1310387]
rn6_v1_chrX_-_31140711_31140711	0.0828861	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082358|Fancb|ENSRNOG00000003346|Fanconi anemia%2C complementation group B [Source:RGD Symbol%3BAcc:1561555]
rn6_v1_chr2_+_143656793_143656845	0.0821635	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084527|Postn|ENSRNOG00000012660|periostin [Source:RGD Symbol%3BAcc:1305285]	ENSRNOT00000017453|Postn|ENSRNOG00000012660|periostin [Source:RGD Symbol%3BAcc:1305285]
rn6_v1_chr11_-_43022565_43022565	0.0821591	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002285|Riox2|ENSRNOG00000001680|ribosomal oxygenase 2 [Source:RGD Symbol%3BAcc:708521]
rn6_v1_chr8_-_132910905_132910905	0.0814399	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008630|Fyco1|ENSRNOG00000006336|FYVE and coiled-coil domain containing 1 [Source:RGD Symbol%3BAcc:1309069]
rn6_v1_chr2_+_224851383_224851383	0.0812991	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015354|Alg14|ENSRNOG00000011528|ALG14%2C UDP-N-acetylglucosaminyltransferase subunit [Source:RGD Symbol%3BAcc:1312003]
rn6_v1_chrX_+_31140960_31140978	0.0811101	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084395|Mospd2|ENSRNOG00000003350|motile sperm domain containing 2 [Source:RGD Symbol%3BAcc:1563952]	ENSRNOT00000004494|Mospd2|ENSRNOG00000003350|motile sperm domain containing 2 [Source:RGD Symbol%3BAcc:1563952]
rn6_v1_chr9_-_44657779_44657779	0.0808217	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025098|Txndc9|ENSRNOG00000018593|thioredoxin domain containing 9 [Source:RGD Symbol%3BAcc:708355]
rn6_v1_chr1_-_261179790_261179790	0.0807769	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074420|Exosc1|ENSRNOG00000048708|exosome component 1 [Source:RGD Symbol%3BAcc:1591855]	ENSRNOT00000072073|Exosc1|ENSRNOG00000048708|exosome component 1 [Source:RGD Symbol%3BAcc:1591855]
rn6_v1_chr9_+_9704346_9704346	0.0805676	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075403|Gpr108|ENSRNOG00000046128|G protein-coupled receptor 108 [Source:RGD Symbol%3BAcc:735149]
rn6_v1_chr6_-_111176918_111176918	0.0792178	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016242|Pomt2|ENSRNOG00000012146|protein-O-mannosyltransferase 2 [Source:RGD Symbol%3BAcc:1586427]
rn6_v1_chr10_+_47018974_47018974	0.0791752	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079375|Smcr8|ENSRNOG00000005165|Smith-Magenis syndrome chromosome region%2C candidate 8 [Source:RGD Symbol%3BAcc:1564621]
rn6_v1_chr16_+_83206004_83206004	0.0791398	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000018870|Ankrd10|ENSRNOG00000013618|ankyrin repeat domain 10 [Source:RGD Symbol%3BAcc:1310501]
rn6_v1_chr19_-_11451278_11451278	0.0787927	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026118|Ogfod1|ENSRNOG00000019288|2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:RGD Symbol%3BAcc:1308848]
rn6_v1_chr17_+_89951752_89951815	0.0786423	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000057572|Abi1|ENSRNOG00000031325|abl-interactor 1 [Source:RGD Symbol%3BAcc:621008]	ENSRNOT00000091023|Abi1|ENSRNOG00000031325|abl-interactor 1 [Source:RGD Symbol%3BAcc:621008]
rn6_v1_chr10_-_95407997_95407997	0.0784438	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077888|Nol11|ENSRNOG00000052934|nucleolar protein 11 [Source:RGD Symbol%3BAcc:1584081]
rn6_v1_chr4_-_99822879_99822992	0.0779918	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012622|Ptcd3|ENSRNOG00000009484|Pentatricopeptide repeat domain 3 [Source:RGD Symbol%3BAcc:1565582]	ENSRNOT00000078991|Ptcd3|ENSRNOG00000009484|Pentatricopeptide repeat domain 3 [Source:RGD Symbol%3BAcc:1565582]
rn6_v1_chr8_+_114867062_114867062	0.0777752	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074771|Wdr82|ENSRNOG00000048441|WD repeat domain 82 [Source:RGD Symbol%3BAcc:1584269]
rn6_v1_chr2_+_187893368_187893368	0.077349	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092031|Mex3a|ENSRNOG00000058654|mex-3 RNA binding family member A [Source:RGD Symbol%3BAcc:1564904]
rn6_v1_chr1_+_220400855_220400855	0.077253	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027178|Slc29a2|ENSRNOG00000020025|solute carrier family 29 member 2 [Source:RGD Symbol%3BAcc:69296]
rn6_v1_chr1_-_64162461_64162461	0.0771647	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091739|Prpf31|ENSRNOG00000061039|pre-mRNA processing factor 31 [Source:RGD Symbol%3BAcc:1305832]
rn6_v1_chr1_+_252894663_252894663	0.0768151	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000054757|Ifit2|ENSRNOG00000036604|interferon-induced protein with tetratricopeptide repeats 2 [Source:RGD Symbol%3BAcc:1307804]
rn6_v1_chr5_-_147907733_147907733	0.0767886	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032558|Tmem39b|ENSRNOG00000023746|transmembrane protein 39b [Source:RGD Symbol%3BAcc:1359450]
rn6_v1_chr1_-_37863756_37863756	0.0764748	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077781|Zfp874b|ENSRNOG00000051377|zinc finger protein 874b [Source:RGD Symbol%3BAcc:1594209]
rn6_v1_chr15_+_33755641_33755641	0.0762592	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087430|Thtpa|ENSRNOG00000018105|thiamine triphosphatase [Source:RGD Symbol%3BAcc:727917]
rn6_v1_chr8_+_62696720_62696720	0.0759271	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010083|Ubl7|ENSRNOG00000007442|ubiquitin-like 7 [Source:RGD Symbol%3BAcc:1303055]
rn6_v1_chrX_+_110894845_110894845	0.0757727	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080072|Tbc1d8b|ENSRNOG00000054011|TBC1 domain family member 8B [Source:RGD Symbol%3BAcc:1563084]
rn6_v1_chr7_-_144223429_144223429	0.0754833	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020527|Atf7|ENSRNOG00000015269|activating transcription factor 7 [Source:RGD Symbol%3BAcc:1304940]
rn6_v1_chr6_-_28663233_28663233	0.0753466	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000070979|Cenpo|ENSRNOG00000050111|centromere protein O [Source:RGD Symbol%3BAcc:1590328]
rn6_v1_chr1_-_13395370_13395370	0.0753255	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085519|Ccdc28a|ENSRNOG00000053347|coiled-coil domain containing 28A [Source:RGD Symbol%3BAcc:1310326]
rn6_v1_chr8_+_113936991_113936991	0.0748223	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017743|Aste1|ENSRNOG00000013059|asteroid homolog 1 (Drosophila) [Source:RGD Symbol%3BAcc:1304643]
rn6_v1_chr11_-_31892531_31892531	0.0746236	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033745|Cryzl1|ENSRNOG00000028014|crystallin zeta like 1 [Source:RGD Symbol%3BAcc:1310219]
rn6_v1_chr10_+_86724427_86724427	0.0741878	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013204|Casc3|ENSRNOG00000009716|cancer susceptibility candidate 3 [Source:RGD Symbol%3BAcc:628766]
rn6_v1_chr6_-_1319541_1319541	0.07412	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006527|Strn|ENSRNOG00000004806|striatin [Source:RGD Symbol%3BAcc:3782]
rn6_v1_chr2_+_27365148_27365148	0.0740964	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000021549|Col4a3bp|ENSRNOG00000015686|collagen type IV alpha 3 binding protein [Source:RGD Symbol%3BAcc:1309131]
rn6_v1_chr14_+_106008086_106008086	0.0734372	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009319|Peli1|ENSRNOG00000006329|pellino E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1311199]
rn6_v1_chr7_-_83701447_83701447	0.073321	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000088893|AABR07057675.1|ENSRNOG00000054487|
rn6_v1_chr1_+_203526850_203526850	0.073283	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087065|Bub3|ENSRNOG00000020643|BUB3 mitotic checkpoint protein [Source:RGD Symbol%3BAcc:1306654]
rn6_v1_chr13_+_73708815_73708815	0.0729299	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071482|Tor1aip2|ENSRNOG00000048267|torsin 1A interacting protein 2 [Source:RGD Symbol%3BAcc:735059]	ENSRNOT00000077874|Tor1aip2|ENSRNOG00000048267|torsin 1A interacting protein 2 [Source:RGD Symbol%3BAcc:735059]	ENSRNOT00000050734|Tor1aip2|ENSRNOG00000024849|torsin 1A interacting protein 2 [Source:RGD Symbol%3BAcc:735059]
rn6_v1_chr19_-_25801526_25801526	0.0729215	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003884|Nacc1|ENSRNOG00000002864|nucleus accumbens associated 1 [Source:RGD Symbol%3BAcc:621003]
rn6_v1_chr5_-_160352927_160352927	0.0722724	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017247|Dnajc16|ENSRNOG00000012503|DnaJ heat shock protein family (Hsp40) member C16 [Source:RGD Symbol%3BAcc:1359395]
rn6_v1_chr7_-_118332577_118332577	0.072159	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090370|Rbfox2|ENSRNOG00000004688|RNA binding protein%2C fox-1 homolog 2 [Source:RGD Symbol%3BAcc:1311838]
rn6_v1_chr2_+_87018305_87018305	0.0718591	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079449|Rsl1|ENSRNOG00000057159|regulator of sex limited protein 1 [Source:RGD Symbol%3BAcc:1587849]
rn6_v1_chr11_-_70618347_70618347	0.0717819	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002435|Zfp148|ENSRNOG00000001789|zinc finger protein 148 [Source:RGD Symbol%3BAcc:62063]
rn6_v1_chr3_-_55451798_55451798	0.0716873	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008837|Spc25|ENSRNOG00000006731|SPC25%2C NDC80 kinetochore complex component [Source:RGD Symbol%3BAcc:1307811]
rn6_v1_chr17_+_10586043_10586043	0.0716707	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023125|LOC306766|ENSRNOG00000017133|hypothetical LOC306766 [Source:RGD Symbol%3BAcc:1359256]
rn6_v1_chr6_+_99883959_99883959	0.0715539	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010588|Fntb|ENSRNOG00000007660|farnesyltransferase%2C CAAX box%2C beta [Source:RGD Symbol%3BAcc:620119]
rn6_v1_chr8_+_94122728_94122728	0.0712043	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014783|Dopey1|ENSRNOG00000022847|dopey family member 1 [Source:RGD Symbol%3BAcc:1305534]
rn6_v1_chr10_-_103619083_103619083	0.0705963	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000029092|Cd300e|ENSRNOG00000036726|Cd300e molecule [Source:RGD Symbol%3BAcc:1585137]
rn6_v1_chr1_-_221605400_221605400	0.0701154	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028542|Ppp2r5b|ENSRNOG00000021025|protein phosphatase 2%2C regulatory subunit B'%2C beta [Source:RGD Symbol%3BAcc:727786]
rn6_v1_chr17_-_90755852_90755852	0.0700899	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003526|Ero1b|ENSRNOG00000002609|endoplasmic reticulum oxidoreductase 1 beta [Source:RGD Symbol%3BAcc:1563548]
rn6_v1_chr3_-_161376119_161376119	0.070048	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023521|Zfp335|ENSRNOG00000017290|zinc finger protein 335 [Source:RGD Symbol%3BAcc:628751]
rn6_v1_chr5_+_139038134_139038134	0.0698969	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078155|Hivep3|ENSRNOG00000009341|human immunodeficiency virus type I enhancer binding protein 3 [Source:RGD Symbol%3BAcc:1311252]
rn6_v1_chr7_-_40315377_40315408	0.0696037	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091319|RGD1307947|ENSRNOG00000006973|similar to RIKEN cDNA C430008C19 [Source:RGD Symbol%3BAcc:1307947]	ENSRNOT00000036141|RGD1307947|ENSRNOG00000006973|similar to RIKEN cDNA C430008C19 [Source:RGD Symbol%3BAcc:1307947]
rn6_v1_chr3_+_11317183_11317328	0.069258	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091171|Golga2|ENSRNOG00000011884|golgin A2 [Source:RGD Symbol%3BAcc:620282]	ENSRNOT00000016341|Golga2|ENSRNOG00000011884|golgin A2 [Source:RGD Symbol%3BAcc:620282]
rn6_v1_chr1_-_225952516_225952516	0.0691986	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043387|Incenp|ENSRNOG00000032929|inner centromere protein [Source:RGD Symbol%3BAcc:1305292]
rn6_v1_chr20_+_32509598_32509598	0.068996	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000046268|Kpna5|ENSRNOG00000030109|karyopherin subunit alpha 5 [Source:RGD Symbol%3BAcc:1561324]
rn6_v1_chr13_-_78957183_78957212	0.0681271	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076954|Klhl20|ENSRNOG00000002875|kelch-like family member 20 [Source:RGD Symbol%3BAcc:1309490]	ENSRNOT00000003851|Klhl20|ENSRNOG00000002875|kelch-like family member 20 [Source:RGD Symbol%3BAcc:1309490]
rn6_v1_chr3_-_177078594_177078594	0.0677344	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020695|Uckl1|ENSRNOG00000050277|uridine-cytidine kinase 1-like 1 [Source:RGD Symbol%3BAcc:1565465]
rn6_v1_chr6_-_100011388_100011388	0.0676575	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010954|Max|ENSRNOG00000008049|MYC associated factor X [Source:RGD Symbol%3BAcc:621101]
rn6_v1_chr12_+_24367199_24367199	0.0675415	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001971|Fkbp6|ENSRNOG00000001451|FK506 binding protein 6 [Source:RGD Symbol%3BAcc:1308926]
rn6_v1_chr5_+_25725683_25725683	0.0675093	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087602|LOC679087|ENSRNOG00000055292|similar to swan [Source:RGD Symbol%3BAcc:1593040]
rn6_v1_chr10_-_11085142_11085210	0.0672878	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081596|Dnaja3|ENSRNOG00000003855|DnaJ heat shock protein family (Hsp40) member A3 [Source:RGD Symbol%3BAcc:1306527]	ENSRNOT00000005479|Dnaja3|ENSRNOG00000003855|DnaJ heat shock protein family (Hsp40) member A3 [Source:RGD Symbol%3BAcc:1306527]	ENSRNOT00000085230|Dnaja3|ENSRNOG00000003855|DnaJ heat shock protein family (Hsp40) member A3 [Source:RGD Symbol%3BAcc:1306527]
rn6_v1_chr5_-_13097341_13097341	0.066744	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061884|Rb1cc1|ENSRNOG00000006833|RB1-inducible coiled-coil 1 [Source:RGD Symbol%3BAcc:1309346]
rn6_v1_chr12_-_650376_650376	0.0664821	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001468|N4bp2l2|ENSRNOG00000001108|NEDD4 binding protein 2-like 2 [Source:RGD Symbol%3BAcc:1359603]
rn6_v1_chr5_+_25253010_25253010	0.0661011	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061333|Rbm12b|ENSRNOG00000016330|RNA binding motif protein 12B [Source:RGD Symbol%3BAcc:1307658]
rn6_v1_chr12_-_11176106_11176106	0.0658482	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090073|Zkscan5|ENSRNOG00000059552|zinc finger with KRAB and SCAN domains 5 [Source:RGD Symbol%3BAcc:1311175]
rn6_v1_chr13_+_43850751_43850751	0.065469	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004995|Mgat5|ENSRNOG00000003614|mannosyl (alpha-1%2C6-)-glycoprotein beta-1%2C6-N-acetyl-glucosaminyltransferase [Source:RGD Symbol%3BAcc:620100]
rn6_v1_chr5_-_92039146_92039146	0.0654192	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031852|Tmem261|ENSRNOG00000023946|transmembrane protein 261 [Source:RGD Symbol%3BAcc:1309148]
rn6_v1_chr20_-_4390436_4390579	0.0653066	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000497|Ppt2|ENSRNOG00000000435|palmitoyl-protein thioesterase 2 [Source:RGD Symbol%3BAcc:620375]	ENSRNOT00000077655|Ppt2|ENSRNOG00000000435|palmitoyl-protein thioesterase 2 [Source:RGD Symbol%3BAcc:620375]
rn6_v1_chr8_-_106617597_106617597	0.0646873	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000070953|Mrps22|ENSRNOG00000047984|mitochondrial ribosomal protein S22 [Source:RGD Symbol%3BAcc:1585674]
rn6_v1_chr18_-_32670665_32670665	0.0644638	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019409|Nr3c1|ENSRNOG00000048800|nuclear receptor subfamily 3%2C group C%2C member 1 [Source:RGD Symbol%3BAcc:2741]
rn6_v1_chr8_+_117068582_117068582	0.0643759	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073559|Amt|ENSRNOG00000050214|aminomethyltransferase [Source:RGD Symbol%3BAcc:1359408]
rn6_v1_chr6_-_105261549_105261549	0.0641637	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009122|Synj2bp|ENSRNOG00000006399|synaptojanin 2 binding protein [Source:RGD Symbol%3BAcc:69400]
rn6_v1_chr19_-_10653800_10653800	0.0638311	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022128|Cx3cl1|ENSRNOG00000016326|C-X3-C motif chemokine ligand 1 [Source:RGD Symbol%3BAcc:620458]
rn6_v1_chr20_+_50652745_50652745	0.0637472	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000365|Hace1|ENSRNOG00000000327|HECT domain and ankyrin repeat containing%2C E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1306114]
rn6_v1_chr17_+_9596957_9596957	0.0635514	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017349|Fam193b|ENSRNOG00000039807|family with sequence similarity 193%2C member B [Source:RGD Symbol%3BAcc:1562335]
rn6_v1_chr4_+_152430509_152430509	0.0634365	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076062|Rad52|ENSRNOG00000009742|RAD52 homolog%2C DNA repair protein [Source:RGD Symbol%3BAcc:1304975]
rn6_v1_chr4_+_34282625_34282665	0.0628759	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011138|Glcci1|ENSRNOG00000008524|glucocorticoid induced 1 [Source:RGD Symbol%3BAcc:1563612]	ENSRNOT00000086735|Glcci1|ENSRNOG00000008524|glucocorticoid induced 1 [Source:RGD Symbol%3BAcc:1563612]
rn6_v1_chr11_-_44049648_44049648	0.062784	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002257|Cpox|ENSRNOG00000001654|coproporphyrinogen oxidase [Source:RGD Symbol%3BAcc:1311817]
rn6_v1_chrX_-_128268285_128268322	0.0626173	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009755|Thoc2|ENSRNOG00000007315|THO complex 2 [Source:RGD Symbol%3BAcc:1561623]	ENSRNOT00000081880|Thoc2|ENSRNOG00000007315|THO complex 2 [Source:RGD Symbol%3BAcc:1561623]
rn6_v1_chr1_+_199351628_199351628	0.0617926	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078578|Bckdk|ENSRNOG00000019485|branched chain ketoacid dehydrogenase kinase [Source:RGD Symbol%3BAcc:2198]
rn6_v1_chr1_-_226935689_226935689	0.0617027	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000038807|Tmem109|ENSRNOG00000028017|transmembrane protein 109 [Source:RGD Symbol%3BAcc:1359538]
rn6_v1_chr13_-_48284990_48284990	0.061567	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086928|Srgap2|ENSRNOG00000006733|SLIT-ROBO Rho GTPase activating protein 2 [Source:RGD Symbol%3BAcc:1566016]
rn6_v1_chr2_+_206392200_206392200	0.0612833	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026631|Rsbn1|ENSRNOG00000019671|round spermatid basic protein 1 [Source:RGD Symbol%3BAcc:1307231]
rn6_v1_chr2_+_27949208_27949208	0.0607848	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000052072|Gfm2|ENSRNOG00000025285|G elongation factor%2C mitochondrial 2 [Source:RGD Symbol%3BAcc:1309854]
rn6_v1_chr13_+_52624878_52624905	0.0607474	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076054|Tnni1|ENSRNOG00000009073|troponin I1%2C slow skeletal type [Source:RGD Symbol%3BAcc:621765]	ENSRNOT00000076299|Tnni1|ENSRNOG00000009073|troponin I1%2C slow skeletal type [Source:RGD Symbol%3BAcc:621765]
rn6_v1_chr10_+_15196130_15196130	0.0606551	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082567|Jmjd8|ENSRNOG00000019729|jumonji domain containing 8 [Source:RGD Symbol%3BAcc:1307381]
rn6_v1_chr8_-_39437270_39437270	0.0606269	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076158|Pknox2|ENSRNOG00000028856|PBX/knotted 1 homeobox 2 [Source:RGD Symbol%3BAcc:1590611]
rn6_v1_chr10_-_39054142_39054142	0.0606217	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000063772|Rad50|ENSRNOG00000033065|RAD50 double strand break repair protein [Source:RGD Symbol%3BAcc:621542]
rn6_v1_chr2_+_174013288_174013288	0.0600091	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013904|Serpini1|ENSRNOG00000010248|serpin family I member 1 [Source:RGD Symbol%3BAcc:619896]
rn6_v1_chr20_-_32501722_32501722	0.0598262	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000448|Zufsp|ENSRNOG00000000398|zinc finger with UFM1-specific peptidase domain [Source:RGD Symbol%3BAcc:1307672]
rn6_v1_chr2_+_140471690_140471690	0.0597535	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017379|Naa15|ENSRNOG00000012385|N(alpha)-acetyltransferase 15%2C NatA auxiliary subunit [Source:RGD Symbol%3BAcc:1310984]
rn6_v1_chr3_+_175408629_175408629	0.059091	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081344|Lsm14b|ENSRNOG00000054557|LSM family member 14B [Source:RGD Symbol%3BAcc:1563798]
rn6_v1_chr8_+_116289590_116289590	0.0590577	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032263|Tmem115|ENSRNOG00000021899|transmembrane protein 115 [Source:RGD Symbol%3BAcc:1310540]
rn6_v1_chr20_+_4414276_4414276	0.0589333	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000492|Atf6b|ENSRNOG00000000431|activating transcription factor 6 beta [Source:RGD Symbol%3BAcc:1303317]
rn6_v1_chr20_-_5441706_5441706	0.0585116	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000549|Vps52|ENSRNOG00000000470|VPS52 GARP complex subunit [Source:RGD Symbol%3BAcc:3618]
rn6_v1_chr12_-_11215649_11215708	0.0580092	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042474|Cpsf4|ENSRNOG00000000985|cleavage and polyadenylation specific factor 4 [Source:RGD Symbol%3BAcc:620440]	ENSRNOT00000076369|Cpsf4|ENSRNOG00000000985|cleavage and polyadenylation specific factor 4 [Source:RGD Symbol%3BAcc:620440]
rn6_v1_chr8_+_96356088_96356088	0.0577074	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032976|Zfp949|ENSRNOG00000043223|zinc finger protein 949 [Source:RGD Symbol%3BAcc:2302581]
rn6_v1_chr14_-_14689554_14689554	0.0575891	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002814|Fras1|ENSRNOG00000002053|Fraser extracellular matrix complex subunit 1 [Source:RGD Symbol%3BAcc:1306516]
rn6_v1_chr4_-_7311807_7311878	0.05742	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012222|Abcb8|ENSRNOG00000008557|ATP binding cassette subfamily B member 8 [Source:RGD Symbol%3BAcc:1307655]	ENSRNOT00000089817|Abcb8|ENSRNOG00000008557|ATP binding cassette subfamily B member 8 [Source:RGD Symbol%3BAcc:1307655]
rn6_v1_chr1_-_193459396_193459396	0.0573897	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020281|Zkscan2|ENSRNOG00000024245|zinc finger with KRAB and SCAN domains 2 [Source:RGD Symbol%3BAcc:1359568]
rn6_v1_chr1_+_198528635_198528635	0.0573094	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022765|LOC308990|ENSRNOG00000016978|hypothetical protein LOC308990 [Source:RGD Symbol%3BAcc:1564503]
rn6_v1_chr19_+_752151_752151	0.0572853	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075978|Dync1li2|ENSRNOG00000025791|dynein%2C cytoplasmic 1 light intermediate chain 2 [Source:RGD Symbol%3BAcc:621130]
rn6_v1_chr9_-_49448168_49448168	0.0572576	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000059478|AABR07067499.1|ENSRNOG00000038911|
rn6_v1_chr2_-_1561464_1561464	0.0572512	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000062055|Cast|ENSRNOG00000010286|calpastatin [Source:RGD Symbol%3BAcc:2278]	ENSRNOT00000062054|Cast|ENSRNOG00000010286|calpastatin [Source:RGD Symbol%3BAcc:2278]	ENSRNOT00000062052|Cast|ENSRNOG00000010286|calpastatin [Source:RGD Symbol%3BAcc:2278]
rn6_v1_chr10_+_28243_28321	0.0572476	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003193|LOC103689943|ENSRNOG00000002314|meiosis arrest female protein 1-like [Source:RGD Symbol%3BAcc:9219913]	ENSRNOT00000087156|LOC103689943|ENSRNOG00000002314|meiosis arrest female protein 1-like [Source:RGD Symbol%3BAcc:9219913]
rn6_v1_chr7_-_70829815_70829815	0.0571505	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011082|Shmt2|ENSRNOG00000008106|serine hydroxymethyltransferase 2 [Source:RGD Symbol%3BAcc:1308582]
rn6_v1_chr6_+_102392828_102392828	0.0568977	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089162|Rdh12|ENSRNOG00000056553|retinol dehydrogenase 12 (all-trans/9-cis/11-cis) [Source:RGD Symbol%3BAcc:1310462]
rn6_v1_chr4_+_177402904_177402904	0.0564826	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020042|Etnk1|ENSRNOG00000014856|ethanolamine kinase 1 [Source:RGD Symbol%3BAcc:1308204]
rn6_v1_chr4_-_119568736_119568736	0.0560329	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000041234|Aplf|ENSRNOG00000043059|aprataxin and PNKP like factor [Source:RGD Symbol%3BAcc:1565557]
rn6_v1_chr13_-_48284408_48284408	0.0559573	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085967|Srgap2|ENSRNOG00000006733|SLIT-ROBO Rho GTPase activating protein 2 [Source:RGD Symbol%3BAcc:1566016]
rn6_v1_chr15_-_33165895_33165895	0.0558636	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016302|Prmt5|ENSRNOG00000012046|protein arginine methyltransferase 5 [Source:RGD Symbol%3BAcc:1309053]
rn6_v1_chr20_-_18489833_18489833	0.0557446	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000748|Ipmk|ENSRNOG00000000609|inositol polyphosphate multikinase [Source:RGD Symbol%3BAcc:620954]
rn6_v1_chr10_+_63829807_63829807	0.0551601	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006407|Crk|ENSRNOG00000025792|CRK proto-oncogene%2C adaptor protein [Source:RGD Symbol%3BAcc:2405]
rn6_v1_chrX_-_158261717_158261717	0.0550625	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086804|RGD1561558|ENSRNOG00000053609|similar to RIKEN cDNA 1700001F22 [Source:RGD Symbol%3BAcc:1561558]
rn6_v1_chr2_+_34255305_34255317	0.0548432	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016649|Trim23|ENSRNOG00000012354|tripartite motif-containing 23 [Source:RGD Symbol%3BAcc:621587]	ENSRNOT00000016596|Trim23|ENSRNOG00000012354|tripartite motif-containing 23 [Source:RGD Symbol%3BAcc:621587]
rn6_v1_chr8_+_116297950_116297950	0.0546979	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000051522|Nprl2|ENSRNOG00000021660|NPR2-like%2C GATOR1 complex subunit [Source:RGD Symbol%3BAcc:1308927]
rn6_v1_chr12_+_24324590_24324590	0.0543757	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001968|Pom121|ENSRNOG00000001449|POM121 transmembrane nucleoporin [Source:RGD Symbol%3BAcc:620680]
rn6_v1_chr9_+_79944132_79944155	0.0539156	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071856|Smarcal1|ENSRNOG00000016503|Swi/SNF related matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1 [Source:RGD Symbol%3BAcc:1306134]	ENSRNOT00000022459|Smarcal1|ENSRNOG00000016503|Swi/SNF related matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1 [Source:RGD Symbol%3BAcc:1306134]
rn6_v1_chr1_+_204861566_204861566	0.0538517	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023214|Fam175b|ENSRNOG00000017222|family with sequence similarity 175%2C member B [Source:RGD Symbol%3BAcc:1308918]
rn6_v1_chr18_+_15298978_15298978	0.0535944	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000021263|Trappc8|ENSRNOG00000022202|trafficking protein particle complex 8 [Source:RGD Symbol%3BAcc:1309102]
rn6_v1_chr1_+_145770135_145770135	0.0529401	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015320|Stard5|ENSRNOG00000025052|StAR-related lipid transfer domain containing 5 [Source:RGD Symbol%3BAcc:1561783]
rn6_v1_chr5_+_154552195_154552195	0.0521883	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072864|Asap3|ENSRNOG00000049714|ArfGAP with SH3 domain%2C ankyrin repeat and PH domain 3 [Source:RGD Symbol%3BAcc:1593929]
rn6_v1_chr1_-_192025350_192025350	0.0521295	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071946|Ears2|ENSRNOG00000025353|glutamyl-tRNA synthetase 2%2C mitochondrial [Source:RGD Symbol%3BAcc:1307904]
rn6_v1_chr1_-_169463760_169463760	0.0512558	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023100|Trim30c|ENSRNOG00000017191|tripartite motif-containing 30C [Source:RGD Symbol%3BAcc:1566132]
rn6_v1_chr8_-_55408464_55408464	0.0510039	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066893|Sik2|ENSRNOG00000043498|salt-inducible kinase 2 [Source:RGD Symbol%3BAcc:1559698]
rn6_v1_chr6_-_27512287_27512287	0.0509712	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085937|Selenoi|ENSRNOG00000059295|selenoprotein I [Source:RGD Symbol%3BAcc:1560938]	ENSRNOT00000081278|Selenoi|ENSRNOG00000059295|selenoprotein I [Source:RGD Symbol%3BAcc:1560938]	ENSRNOT00000081323|Selenoi|ENSRNOG00000059295|selenoprotein I [Source:RGD Symbol%3BAcc:1560938]
rn6_v1_chr1_-_275906686_275906686	0.0505912	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092170|Gpam|ENSRNOG00000015124|glycerol-3-phosphate acyltransferase%2C mitochondrial [Source:RGD Symbol%3BAcc:61847]
rn6_v1_chr11_+_32450587_32450587	0.0505274	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061235|Smim11|ENSRNOG00000039877|small integral membrane protein 11 [Source:RGD Symbol%3BAcc:2299853]
rn6_v1_chr12_-_24102084_24102084	0.0505144	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001962|Rhbdd2|ENSRNOG00000001443|rhomboid domain containing 2 [Source:RGD Symbol%3BAcc:1308231]
rn6_v1_chr7_-_60743328_60743328	0.0502735	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066767|Mdm2|ENSRNOG00000006304|MDM2 proto-oncogene [Source:RGD Symbol%3BAcc:1305332]
rn6_v1_chr9_+_10013854_10013930	0.050264	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077653|Khsrp|ENSRNOG00000047628|KH-type splicing regulatory protein [Source:RGD Symbol%3BAcc:621828]	ENSRNOT00000072033|Khsrp|ENSRNOG00000047628|KH-type splicing regulatory protein [Source:RGD Symbol%3BAcc:621828]
rn6_v1_chr16_+_86631064_86631064	0.0500024	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019675|Efnb2|ENSRNOG00000014648|ephrin B2 [Source:RGD Symbol%3BAcc:1309497]
rn6_v1_chr3_+_101156212_101156212	0.0493946	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000065333|Ccdc34|ENSRNOG00000005902|coiled-coil domain containing 34 [Source:RGD Symbol%3BAcc:1560583]
rn6_v1_chr19_-_39246545_39246545	0.0491177	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000036634|Pdf|ENSRNOG00000022303|peptide deformylase (mitochondrial) [Source:RGD Symbol%3BAcc:1582894]
rn6_v1_chr20_+_3827367_3827367	0.0490974	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079967|Rxrb|ENSRNOG00000000464|retinoid X receptor beta [Source:RGD Symbol%3BAcc:3611]
rn6_v1_chr10_+_91126689_91126689	0.048826	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004046|Nmt1|ENSRNOG00000002989|N-myristoyltransferase 1 [Source:RGD Symbol%3BAcc:628642]
rn6_v1_chr1_-_226630900_226630900	0.0488258	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028092|Tmem138|ENSRNOG00000020693|transmembrane protein 138 [Source:RGD Symbol%3BAcc:735168]
rn6_v1_chr2_-_226779440_226779440	0.0487439	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000055669|Fnbp1l|ENSRNOG00000013798|formin binding protein 1-like [Source:RGD Symbol%3BAcc:1305386]
rn6_v1_chr4_+_28441301_28441301	0.0487027	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000067087|Vps50|ENSRNOG00000009894|VPS50 EARP/GARPII complex subunit [Source:RGD Symbol%3BAcc:1304751]
rn6_v1_chr2_-_116413043_116413043	0.0486091	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078148|Mynn|ENSRNOG00000027923|myoneurin [Source:RGD Symbol%3BAcc:1307889]
rn6_v1_chr4_+_22084954_22084954	0.0484292	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090968|Crot|ENSRNOG00000006779|carnitine O-octanoyltransferase [Source:RGD Symbol%3BAcc:70908]
rn6_v1_chr1_+_116587815_116587815	0.0482111	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000021366|Ube3a|ENSRNOG00000015734|ubiquitin protein ligase E3A [Source:RGD Symbol%3BAcc:1306361]
rn6_v1_chr13_+_49195325_49195325	0.0481778	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004810|Dstyk|ENSRNOG00000021298|dual serine/threonine and tyrosine protein kinase [Source:RGD Symbol%3BAcc:735051]
rn6_v1_chr9_-_50868238_50868238	0.0480127	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015600|Tex30|ENSRNOG00000011658|testis expressed 30 [Source:RGD Symbol%3BAcc:1309095]
rn6_v1_chr13_+_110007010_110007010	0.0478433	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005387|Tmem206|ENSRNOG00000003915|transmembrane protein 206 [Source:RGD Symbol%3BAcc:1359339]
rn6_v1_chr5_-_145123861_145123861	0.0474301	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064015|Zmym1|ENSRNOG00000013855|zinc finger MYM-type containing 1 [Source:RGD Symbol%3BAcc:1307027]
rn6_v1_chrX_+_14498283_14498283	0.0472519	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092143|Xk|ENSRNOG00000003749|X-linked Kx blood group [Source:RGD Symbol%3BAcc:1359650]
rn6_v1_chr1_+_15799853_15799853	0.046853	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078589|Bclaf1|ENSRNOG00000058050|BCL2-associated transcription factor 1 [Source:RGD Symbol%3BAcc:1309704]
rn6_v1_chr1_-_84491466_84491466	0.0466061	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034609|Map3k10|ENSRNOG00000023521|mitogen activated protein kinase kinase kinase 10 [Source:RGD Symbol%3BAcc:1308381]
rn6_v1_chr7_+_12840938_12840938	0.0459208	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000039232|Polrmt|ENSRNOG00000024879|RNA polymerase mitochondrial [Source:RGD Symbol%3BAcc:1304599]
rn6_v1_chr8_-_48634797_48634797	0.0458687	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012868|Hinfp|ENSRNOG00000009499|histone H4 transcription factor [Source:RGD Symbol%3BAcc:1311492]
rn6_v1_chr8_+_107875991_107875991	0.0455591	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090299|Dzip1l|ENSRNOG00000014746|DAZ interacting zinc finger protein 1-like [Source:RGD Symbol%3BAcc:1311430]
rn6_v1_chr7_+_2435553_2435553	0.0452215	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000065593|Prim1|ENSRNOG00000031993|primase (DNA) subunit 1 [Source:RGD Symbol%3BAcc:621380]
rn6_v1_chr6_+_99433550_99433572	0.0451929	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079359|Hspa2|ENSRNOG00000006472|heat shock protein family A member 2 [Source:RGD Symbol%3BAcc:620664]	ENSRNOT00000008504|Hspa2|ENSRNOG00000006472|heat shock protein family A member 2 [Source:RGD Symbol%3BAcc:620664]
rn6_v1_chr5_+_9279970_9279970	0.0449475	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000067977|Mybl1|ENSRNOG00000021669|myeloblastosis oncogene-like 1 [Source:RGD Symbol%3BAcc:1306940]
rn6_v1_chr10_+_908806_908806	0.0448512	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091520|Marf1|ENSRNOG00000056248|meiosis arrest female 1 [Source:RGD Symbol%3BAcc:619770]
rn6_v1_chr15_+_3436361_3436361	0.0444413	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000016387|Ap3m1|ENSRNOG00000011461|adaptor-related protein complex 3%2C mu 1 subunit [Source:RGD Symbol%3BAcc:620417]
rn6_v1_chr2_+_198823366_198823367	0.0444392	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083769|Pias3|ENSRNOG00000021218|protein inhibitor of activated STAT%2C 3 [Source:RGD Symbol%3BAcc:708413]	ENSRNOT00000028814|Pias3|ENSRNOG00000021218|protein inhibitor of activated STAT%2C 3 [Source:RGD Symbol%3BAcc:708413]
rn6_v1_chr18_-_68983619_68983619	0.0443795	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014670|LOC361346|ENSRNOG00000028677|similar to chromosome 18 open reading frame 54 [Source:RGD Symbol%3BAcc:1563837]
rn6_v1_chr3_+_114355798_114355814	0.0443749	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024658|Slc28a2|ENSRNOG00000028668|solute carrier family 28 member 2 [Source:RGD Symbol%3BAcc:61840]	ENSRNOT00000036435|Slc28a2|ENSRNOG00000028668|solute carrier family 28 member 2 [Source:RGD Symbol%3BAcc:61840]
rn6_v1_chr16_+_7303578_7303578	0.0440329	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025656|Sema3g|ENSRNOG00000018952|semaphorin 3G [Source:RGD Symbol%3BAcc:1306079]
rn6_v1_chr1_-_143256817_143256817	0.0440031	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078789|Cpeb1|ENSRNOG00000019161|cytoplasmic polyadenylation element binding protein 1 [Source:RGD Symbol%3BAcc:1310421]
rn6_v1_chr3_-_94767239_94767239	0.043966	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000056808|Qser1|ENSRNOG00000037514|glutamine and serine rich 1 [Source:RGD Symbol%3BAcc:1311804]
rn6_v1_chr3_-_140141679_140141679	0.0439402	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014632|Crnkl1|ENSRNOG00000010587|crooked neck pre-mRNA splicing factor 1 [Source:RGD Symbol%3BAcc:620507]
rn6_v1_chr11_-_66078669_66078669	0.0435148	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031741|Rabl3|ENSRNOG00000026085|RAB%2C member of RAS oncogene family-like 3 [Source:RGD Symbol%3BAcc:1306436]
rn6_v1_chr13_+_77602249_77602249	0.0434925	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003407|Tnr|ENSRNOG00000002468|tenascin R [Source:RGD Symbol%3BAcc:3886]	ENSRNOT00000076589|Tnr|ENSRNOG00000002468|tenascin R [Source:RGD Symbol%3BAcc:3886]
rn6_v1_chr4_-_85329362_85329362	0.0433874	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014925|Crhr2|ENSRNOG00000011145|corticotropin releasing hormone receptor 2 [Source:RGD Symbol%3BAcc:70547]
rn6_v1_chr11_-_34791993_34791993	0.0430339	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002284|Dscr3|ENSRNOG00000001681|DSCR3 arrestin fold containing [Source:RGD Symbol%3BAcc:1306879]
rn6_v1_chr20_+_4411876_4411876	0.0429275	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000494|Fkbpl|ENSRNOG00000000432|FK506 binding protein-like [Source:RGD Symbol%3BAcc:1303227]
rn6_v1_chr8_-_39243705_39243705	0.042837	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043518|Stt3a|ENSRNOG00000031896|STT3A%2C catalytic subunit of the oligosaccharyltransferase complex [Source:RGD Symbol%3BAcc:1565793]
rn6_v1_chr3_+_110367939_110367939	0.0426379	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010406|Bub1b|ENSRNOG00000007906|BUB1 mitotic checkpoint serine/threonine kinase B [Source:RGD Symbol%3BAcc:619791]
rn6_v1_chr5_-_151536518_151536518	0.0425525	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011311|Wdtc1|ENSRNOG00000008377|WD and tetratricopeptide repeats 1 [Source:RGD Symbol%3BAcc:1310362]
rn6_v1_chrX_+_37469937_37469937	0.0422217	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008938|Rps6ka3|ENSRNOG00000006632|ribosomal protein S6 kinase A3 [Source:RGD Symbol%3BAcc:1563860]
rn6_v1_chr1_-_78195328_78195328	0.0422182	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073034|C5ar1|ENSRNOG00000047800|complement C5a receptor 1 [Source:RGD Symbol%3BAcc:70553]
rn6_v1_chr10_+_46783979_46783979	0.0421118	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005237|Gid4|ENSRNOG00000003847|GID complex subunit 4 [Source:RGD Symbol%3BAcc:1588894]
rn6_v1_chr1_-_101085884_101085884	0.0419853	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085352|Rcn3|ENSRNOG00000043007|reticulocalbin 3 [Source:RGD Symbol%3BAcc:1359365]
rn6_v1_chr7_-_62162453_62162453	0.0419492	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010720|Cand1|ENSRNOG00000007834|cullin-associated and neddylation-dissociated 1 [Source:RGD Symbol%3BAcc:620479]
rn6_v1_chr8_-_39243882_39243882	0.0414114	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082086|Stt3a|ENSRNOG00000031896|STT3A%2C catalytic subunit of the oligosaccharyltransferase complex [Source:RGD Symbol%3BAcc:1565793]
rn6_v1_chr5_-_78267063_78267063	0.0413867	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000040894|Cdc26|ENSRNOG00000029785|cell division cycle 26 [Source:RGD Symbol%3BAcc:1311342]	ENSRNOT00000087648|Cdc26|ENSRNOG00000029785|cell division cycle 26 [Source:RGD Symbol%3BAcc:1311342]
rn6_v1_chr19_+_57286985_57286985	0.0413034	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000058074|Cog2|ENSRNOG00000018228|component of oligomeric golgi complex 2 [Source:RGD Symbol%3BAcc:1589822]
rn6_v1_chr10_-_12892446_12892446	0.040923	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030704|Zfp213|ENSRNOG00000021872|zinc finger protein 213 [Source:RGD Symbol%3BAcc:1305919]
rn6_v1_chr4_+_153747947_153747947	0.0407063	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073303|Pex26|ENSRNOG00000049982|peroxisomal biogenesis factor 26 [Source:RGD Symbol%3BAcc:1584998]
rn6_v1_chr6_+_26642783_26642783	0.0406854	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008126|Slc30a3|ENSRNOG00000006204|solute carrier family 30 member 3 [Source:RGD Symbol%3BAcc:1359689]
rn6_v1_chr2_+_187893875_187893875	0.0403183	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000093014|Mex3a|ENSRNOG00000058654|mex-3 RNA binding family member A [Source:RGD Symbol%3BAcc:1564904]
rn6_v1_chr11_+_86852711_86852711	0.0403068	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002581|Dgcr8|ENSRNOG00000001886|DGCR8 microprocessor complex subunit [Source:RGD Symbol%3BAcc:1306365]
rn6_v1_chr8_+_126411829_126411829	0.0401164	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013450|Azi2|ENSRNOG00000010096|5-azacytidine induced 2 [Source:RGD Symbol%3BAcc:1310530]
rn6_v1_chr3_+_120728688_120728688	0.0399926	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022596|Bcl2l11|ENSRNOG00000016551|BCL2 like 11 [Source:RGD Symbol%3BAcc:628774]
rn6_v1_chr1_-_209749204_209749204	0.0392252	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073093|LOC100362342|ENSRNOG00000050554|rCG47764-like [Source:RGD Symbol%3BAcc:2318344]
rn6_v1_chr8_+_117308469_117308469	0.0390391	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080778|Qrich1|ENSRNOG00000025071|glutamine-rich 1 [Source:RGD Symbol%3BAcc:1311095]
rn6_v1_chr3_+_122803772_122803772	0.0389826	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009564|Nop56|ENSRNOG00000007128|NOP56 ribonucleoprotein [Source:RGD Symbol%3BAcc:1308892]
rn6_v1_chr4_+_140247313_140247335	0.0387967	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000040255|Itpr1|ENSRNOG00000007104|inositol 1%2C4%2C5-trisphosphate receptor%2C type 1 [Source:RGD Symbol%3BAcc:2933]	ENSRNOT00000064025|Itpr1|ENSRNOG00000007104|inositol 1%2C4%2C5-trisphosphate receptor%2C type 1 [Source:RGD Symbol%3BAcc:2933]	ENSRNOT00000041130|Itpr1|ENSRNOG00000007104|inositol 1%2C4%2C5-trisphosphate receptor%2C type 1 [Source:RGD Symbol%3BAcc:2933]	ENSRNOT00000043646|Itpr1|ENSRNOG00000007104|inositol 1%2C4%2C5-trisphosphate receptor%2C type 1 [Source:RGD Symbol%3BAcc:2933]
rn6_v1_chrX_-_53235280_53235286	0.038641	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000048154|AC127605.1|ENSRNOG00000033156|	ENSRNOT00000043970|AC127605.1|ENSRNOG00000033156|
rn6_v1_chr5_-_9038594_9038594	0.0386011	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030053|Mcmdc2|ENSRNOG00000021702|minichromosome maintenance domain containing 2 [Source:RGD Symbol%3BAcc:1561068]
rn6_v1_chr11_-_87628502_87628502	0.0385704	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002568|Med15|ENSRNOG00000001877|mediator complex subunit 15 [Source:RGD Symbol%3BAcc:1307560]
rn6_v1_chr10_+_45322248_45322248	0.0382314	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000047268|Trim11|ENSRNOG00000002915|tripartite motif-containing 11 [Source:RGD Symbol%3BAcc:1305448]
rn6_v1_chr2_-_165600748_165600748	0.038127	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013216|Ift80|ENSRNOG00000009808|intraflagellar transport 80 [Source:RGD Symbol%3BAcc:1312006]
rn6_v1_chr11_-_30428073_30428073	0.0380477	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000047741|Scaf4|ENSRNOG00000002104|SR-related CTD-associated factor 4 [Source:RGD Symbol%3BAcc:727896]
rn6_v1_chr16_+_86600877_86600877	0.0377491	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000057347|Arglu1|ENSRNOG00000024142|arginine and glutamate rich 1 [Source:RGD Symbol%3BAcc:1310061]
rn6_v1_chr10_+_46940965_46940965	0.0368098	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005366|Llgl1|ENSRNOG00000003948|LLGL1%2C scribble cell polarity complex component [Source:RGD Symbol%3BAcc:3012]
rn6_v1_chrX_-_114658931_114658931	0.036542	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006008|Chrdl1|ENSRNOG00000004330|chordin-like 1 [Source:RGD Symbol%3BAcc:735215]
rn6_v1_chr5_+_136406308_136406308	0.0362897	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072492|Eri3|ENSRNOG00000019381|ERI1 exoribonuclease family member 3 [Source:RGD Symbol%3BAcc:1595859]
rn6_v1_chr20_-_14620019_14620019	0.0361779	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001779|Gnaz|ENSRNOG00000001313|G protein subunit alpha z [Source:RGD Symbol%3BAcc:2717]
rn6_v1_chr3_-_162579201_162579201	0.0360112	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000068328|Zmynd8|ENSRNOG00000019154|zinc finger%2C MYND-type containing 8 [Source:RGD Symbol%3BAcc:1309544]
rn6_v1_chr11_+_45888221_45888221	0.0359649	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071932|Lnp1|ENSRNOG00000039649|leukemia NUP98 fusion partner 1 [Source:RGD Symbol%3BAcc:2323126]	ENSRNOT00000066008|Lnp1|ENSRNOG00000039649|leukemia NUP98 fusion partner 1 [Source:RGD Symbol%3BAcc:2323126]	ENSRNOT00000060802|Lnp1|ENSRNOG00000039649|leukemia NUP98 fusion partner 1 [Source:RGD Symbol%3BAcc:2323126]
rn6_v1_chr2_-_41785792_41785792	0.0356258	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015871|Rab3c|ENSRNOG00000011623|RAB3C%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620923]
rn6_v1_chr1_+_261180007_261180007	0.0356053	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072181|Zdhhc16|ENSRNOG00000046530|zinc finger%2C DHHC-type containing 16 [Source:RGD Symbol%3BAcc:1591893]
rn6_v1_chr17_-_78735324_78735324	0.0352131	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000036299|Cdnf|ENSRNOG00000026493|cerebral dopamine neurotrophic factor [Source:RGD Symbol%3BAcc:1307600]
rn6_v1_chr6_+_7900972_7901018	0.0349203	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006953|Dync2li1|ENSRNOG00000005151|dynein cytoplasmic 2 light intermediate chain 1 [Source:RGD Symbol%3BAcc:1310286]	ENSRNOT00000068030|Dync2li1|ENSRNOG00000005151|dynein cytoplasmic 2 light intermediate chain 1 [Source:RGD Symbol%3BAcc:1310286]
rn6_v1_chr5_+_107323258_107323258	0.0348219	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008510|Klhl9|ENSRNOG00000006335|kelch-like family member 9 [Source:RGD Symbol%3BAcc:1304814]
rn6_v1_chr3_+_35014538_35014538	0.0348155	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006341|Kif5c|ENSRNOG00000004680|kinesin family member 5C [Source:RGD Symbol%3BAcc:1308539]
rn6_v1_chr13_+_71192142_71192142	0.0348069	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032157|Rnasel|ENSRNOG00000027017|ribonuclease L [Source:RGD Symbol%3BAcc:727933]
rn6_v1_chr10_+_56605140_56605140	0.0346264	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024079|Phf23|ENSRNOG00000017657|PHD finger protein 23 [Source:RGD Symbol%3BAcc:1302969]
rn6_v1_chr4_+_44774741_44774741	0.0346264	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086902|Met|ENSRNOG00000052745|MET proto-oncogene%2C receptor tyrosine kinase [Source:RGD Symbol%3BAcc:3082]
rn6_v1_chr5_+_140923914_140923914	0.0344715	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020929|Heyl|ENSRNOG00000015318|hes-related family bHLH transcription factor with YRPW motif-like [Source:RGD Symbol%3BAcc:1305022]
rn6_v1_chr6_+_107596782_107596782	0.0344366	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076882|Dnal1|ENSRNOG00000042333|dynein%2C axonemal%2C light chain 1 [Source:RGD Symbol%3BAcc:1591349]
rn6_v1_chr3_+_2262253_2262454	0.0340697	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042100|Nsmf|ENSRNOG00000008810|NMDA receptor synaptonuclear signaling and neuronal migration factor [Source:RGD Symbol%3BAcc:619819]	ENSRNOT00000061303|Nsmf|ENSRNOG00000008810|NMDA receptor synaptonuclear signaling and neuronal migration factor [Source:RGD Symbol%3BAcc:619819]	ENSRNOT00000048137|Nsmf|ENSRNOG00000008810|NMDA receptor synaptonuclear signaling and neuronal migration factor [Source:RGD Symbol%3BAcc:619819]	ENSRNOT00000048353|Nsmf|ENSRNOG00000008810|NMDA receptor synaptonuclear signaling and neuronal migration factor [Source:RGD Symbol%3BAcc:619819]	ENSRNOT00000012129|Nsmf|ENSRNOG00000008810|NMDA receptor synaptonuclear signaling and neuronal migration factor [Source:RGD Symbol%3BAcc:619819]
rn6_v1_chr15_-_89339323_89339323	0.0340159	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013297|Rbm26|ENSRNOG00000009836|RNA binding motif protein 26 [Source:RGD Symbol%3BAcc:1308297]
rn6_v1_chr1_+_106896790_106896790	0.0338291	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042952|Ano5|ENSRNOG00000015972|anoctamin 5 [Source:RGD Symbol%3BAcc:1564265]	ENSRNOT00000064193|Ano5|ENSRNOG00000015972|anoctamin 5 [Source:RGD Symbol%3BAcc:1564265]
rn6_v1_chr2_+_18354542_18354542	0.0338249	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042958|Hapln1|ENSRNOG00000032002|hyaluronan and proteoglycan link protein 1 [Source:RGD Symbol%3BAcc:2412]
rn6_v1_chr15_-_89339037_89339037	0.0338143	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013255|Rbm26|ENSRNOG00000009836|RNA binding motif protein 26 [Source:RGD Symbol%3BAcc:1308297]
rn6_v1_chr3_+_113251778_113251778	0.0334176	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083005|Map1a|ENSRNOG00000014230|microtubule-associated protein 1A [Source:RGD Symbol%3BAcc:3042]
rn6_v1_chr4_-_150829741_150829741	0.0334076	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000051846|Cacna1c|ENSRNOG00000007090|calcium voltage-gated channel subunit alpha1 C [Source:RGD Symbol%3BAcc:2245]	ENSRNOT00000052017|Cacna1c|ENSRNOG00000007090|calcium voltage-gated channel subunit alpha1 C [Source:RGD Symbol%3BAcc:2245]
rn6_v1_chr7_+_53878610_53878610	0.0333655	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091910|Osbpl8|ENSRNOG00000026962|oxysterol binding protein-like 8 [Source:RGD Symbol%3BAcc:1561474]
rn6_v1_chr3_-_57646572_57646572	0.0333003	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076202|Mettl8|ENSRNOG00000009382|methyltransferase like 8 [Source:RGD Symbol%3BAcc:1561059]
rn6_v1_chr5_-_135472116_135472116	0.0330371	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022170|Nasp|ENSRNOG00000016454|nuclear autoantigenic sperm protein [Source:RGD Symbol%3BAcc:1359609]
rn6_v1_chr6_-_1534488_1534488	0.0329889	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006824|Cebpz|ENSRNOG00000005087|CCAAT/enhancer binding protein zeta [Source:RGD Symbol%3BAcc:1304994]
rn6_v1_chr18_+_24540659_24540659	0.0328646	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061074|Ammecr1l|ENSRNOG00000016250|AMMECR1 like [Source:RGD Symbol%3BAcc:1307915]
rn6_v1_chr19_-_37281933_37281933	0.0320995	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000059663|Lrrc29|ENSRNOG00000025231|leucine rich repeat containing 29 [Source:RGD Symbol%3BAcc:1593150]
rn6_v1_chr16_+_82184387_82184402	0.0320145	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089329|Tubgcp3|ENSRNOG00000017085|tubulin%2C gamma complex associated protein 3 [Source:RGD Symbol%3BAcc:1305726]	ENSRNOT00000068416|Tubgcp3|ENSRNOG00000017085|tubulin%2C gamma complex associated protein 3 [Source:RGD Symbol%3BAcc:1305726]
rn6_v1_chr6_-_92398525_92398525	0.0319317	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007314|Sav1|ENSRNOG00000005264|salvador family WW domain containing protein 1 [Source:RGD Symbol%3BAcc:1307253]
rn6_v1_chr6_-_76079283_76079283	0.0318909	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082198|Ppp2r3c|ENSRNOG00000023591|protein phosphatase 2%2C regulatory subunit B''%2C gamma [Source:RGD Symbol%3BAcc:1309207]
rn6_v1_chr11_-_82884660_82884660	0.0318005	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073526|LOC100912498|ENSRNOG00000045653|protein FAM131A-like [Source:RGD Symbol%3BAcc:6486684]
rn6_v1_chr6_-_72462657_72462658	0.0316308	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000088720|Strn3|ENSRNOG00000060335|striatin 3 [Source:RGD Symbol%3BAcc:621827]	ENSRNOT00000077578|Strn3|ENSRNOG00000060335|striatin 3 [Source:RGD Symbol%3BAcc:621827]
rn6_v1_chr10_+_56187020_56187020	0.0316155	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000046490|Tp53|ENSRNOG00000010756|tumor protein p53 [Source:RGD Symbol%3BAcc:3889]
rn6_v1_chr4_-_64831473_64831473	0.0315688	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033268|Dgki|ENSRNOG00000026705|diacylglycerol kinase%2C iota [Source:RGD Symbol%3BAcc:735049]
rn6_v1_chr1_+_212558257_212558257	0.0314695	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024912|Prap1|ENSRNOG00000018446|proline-rich acidic protein 1 [Source:RGD Symbol%3BAcc:61876]
rn6_v1_chr11_-_83905889_83905889	0.0312935	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075606|Fam131a|ENSRNOG00000046177|family with sequence similarity 131%2C member A [Source:RGD Symbol%3BAcc:2322069]
rn6_v1_chr5_-_150439959_150439959	0.0312489	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014506|Gmeb1|ENSRNOG00000010910|glucocorticoid modulatory element binding protein 1 [Source:RGD Symbol%3BAcc:1563208]
rn6_v1_chr3_+_113976687_113976687	0.0311481	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022437|Eif3j|ENSRNOG00000016459|eukaryotic translation initiation factor 3%2C subunit J [Source:RGD Symbol%3BAcc:1593338]
rn6_v1_chr10_+_67762995_67762995	0.0310968	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000253|Zfp207|ENSRNOG00000000236|zinc finger protein 207 [Source:RGD Symbol%3BAcc:1308121]
rn6_v1_chr6_+_8284878_8284878	0.0309104	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009581|Slc3a1|ENSRNOG00000007006|solute carrier family 3 member 1 [Source:RGD Symbol%3BAcc:3709]
rn6_v1_chr4_-_150829913_150829913	0.0308704	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000041571|Cacna1c|ENSRNOG00000007090|calcium voltage-gated channel subunit alpha1 C [Source:RGD Symbol%3BAcc:2245]
rn6_v1_chr2_+_165601007_165601007	0.0307306	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013931|Smc4|ENSRNOG00000010274|structural maintenance of chromosomes 4 [Source:RGD Symbol%3BAcc:1306680]
rn6_v1_chr11_-_14160697_14160697	0.0305636	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081096|Hspa13|ENSRNOG00000060979|heat shock protein 70 family%2C member 13 [Source:RGD Symbol%3BAcc:3775]
rn6_v1_chr1_+_255842783_255842783	0.0305227	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023562|March5|ENSRNOG00000017396|membrane associated ring-CH-type finger 5 [Source:RGD Symbol%3BAcc:1305617]
rn6_v1_chr11_+_31806618_31806618	0.0303261	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043410|Son|ENSRNOG00000002021|Son DNA binding protein [Source:RGD Symbol%3BAcc:1309013]	ENSRNOT00000002769|Son|ENSRNOG00000002021|Son DNA binding protein [Source:RGD Symbol%3BAcc:1309013]
rn6_v1_chr10_-_47018537_47018537	0.0301619	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000068351|Top3a|ENSRNOG00000005099|topoisomerase (DNA) III alpha [Source:RGD Symbol%3BAcc:1309320]	ENSRNOT00000080083|Top3a|ENSRNOG00000005099|topoisomerase (DNA) III alpha [Source:RGD Symbol%3BAcc:1309320]
rn6_v1_chr14_+_78939903_78939961	0.0301461	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078562|Man2b2|ENSRNOG00000061779|mannosidase%2C alpha%2C class 2B%2C member 2 [Source:RGD Symbol%3BAcc:1308840]	ENSRNOT00000088221|Mrfap1|ENSRNOG00000056162|Morf4 family associated protein 1 [Source:RGD Symbol%3BAcc:628631]
rn6_v1_chr11_+_88131960_88131960	0.0299526	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000046664|RGD1308065|ENSRNOG00000026918|hypothetical LOC287935 [Source:RGD Symbol%3BAcc:1308065]
rn6_v1_chr5_+_155935554_155935554	0.0298936	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031855|LOC100911993|ENSRNOG00000013602|ubiquitin carboxyl-terminal hydrolase 48-like [Source:RGD Symbol%3BAcc:6489246]
rn6_v1_chr4_-_148446303_148446303	0.029276	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017633|Alox5|ENSRNOG00000012972|arachidonate 5-lipoxygenase [Source:RGD Symbol%3BAcc:2096]
rn6_v1_chr9_+_100104000_100104000	0.0288414	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074160|Capn10|ENSRNOG00000045623|calpain 10 [Source:RGD Symbol%3BAcc:69354]
rn6_v1_chr6_+_134958854_134958973	0.0288228	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073950|Dync1h1|ENSRNOG00000006178|dynein cytoplasmic 1 heavy chain 1 [Source:RGD Symbol%3BAcc:2511]	ENSRNOT00000009377|Dync1h1|ENSRNOG00000006178|dynein cytoplasmic 1 heavy chain 1 [Source:RGD Symbol%3BAcc:2511]
rn6_v1_chr11_+_88147377_88147377	0.02882	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034506|Ppil2|ENSRNOG00000026900|peptidylprolyl isomerase like 2 [Source:RGD Symbol%3BAcc:1309484]
rn6_v1_chr15_+_48030973_48031074	0.0287164	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085487|Kif13b|ENSRNOG00000013089|kinesin family member 13B [Source:RGD Symbol%3BAcc:1303307]	ENSRNOT00000029757|Kif13b|ENSRNOG00000013089|kinesin family member 13B [Source:RGD Symbol%3BAcc:1303307]
rn6_v1_chr6_-_60374389_60374389	0.0286105	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072872|Zfp277|ENSRNOG00000045854|zinc finger protein 277 [Source:RGD Symbol%3BAcc:1583856]
rn6_v1_chr3_-_147143576_147143576	0.0285024	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091811|Snph|ENSRNOG00000009588|syntaphilin [Source:RGD Symbol%3BAcc:1305867]	ENSRNOT00000012727|Snph|ENSRNOG00000009588|syntaphilin [Source:RGD Symbol%3BAcc:1305867]
rn6_v1_chr6_-_103313074_103313074	0.0284924	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083677|Zfp36l1|ENSRNOG00000058646|zinc finger protein 36%2C C3H type-like 1 [Source:RGD Symbol%3BAcc:62009]
rn6_v1_chr13_-_70783515_70783515	0.0282058	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003605|Lamc1|ENSRNOG00000002680|laminin subunit gamma 1 [Source:RGD Symbol%3BAcc:621052]
rn6_v1_chr3_+_56092501_56092501	0.0282053	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011174|Ssb|ENSRNOG00000007998|Sjogren syndrome antigen B [Source:RGD Symbol%3BAcc:620804]
rn6_v1_chr19_-_12942943_12942963	0.0278768	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064105|Large1|ENSRNOG00000013742|LARGE xylosyl- and glucuronyltransferase 1 [Source:RGD Symbol%3BAcc:1308895]	ENSRNOT00000090886|Large1|ENSRNOG00000013742|LARGE xylosyl- and glucuronyltransferase 1 [Source:RGD Symbol%3BAcc:1308895]
rn6_v1_chr6_+_76079880_76079880	0.0276974	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009304|RGD1305089|ENSRNOG00000007043|similar to 1110008L16Rik protein [Source:RGD Symbol%3BAcc:1305089]
rn6_v1_chr7_+_28762417_28762417	0.0276876	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006903|Washc3|ENSRNOG00000005102|WASH complex subunit 3 [Source:RGD Symbol%3BAcc:1563761]
rn6_v1_chr1_+_61314070_61314070	0.0276274	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077642|Zfp54|ENSRNOG00000051578|zinc finger protein 54 [Source:RGD Symbol%3BAcc:1307738]
rn6_v1_chr1_-_213973163_213973163	0.0274403	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024867|LOC100911402|ENSRNOG00000018448|cell cycle exit and neuronal differentiation protein 1-like [Source:RGD Symbol%3BAcc:6493217]
rn6_v1_chr10_+_12046701_12046736	0.0272766	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000011073|Mefv|ENSRNOG00000008134|MEFV%2C pyrin innate immunity regulator [Source:RGD Symbol%3BAcc:61889]	ENSRNOT00000084004|Mefv|ENSRNOG00000008134|MEFV%2C pyrin innate immunity regulator [Source:RGD Symbol%3BAcc:61889]
rn6_v1_chr9_-_105693357_105693357	0.0266787	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066968|Nudt12|ENSRNOG00000022576|nudix hydrolase 12 [Source:RGD Symbol%3BAcc:1310902]
rn6_v1_chr7_-_15190796_15190796	0.0266434	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006533|Cyp4f1|ENSRNOG00000004786|cytochrome P450%2C family 4%2C subfamily f%2C polypeptide 1 [Source:RGD Symbol%3BAcc:70926]
rn6_v1_chr2_+_86971147_86971147	0.0266183	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032909|Zfp458|ENSRNOG00000017986|zinc finger protein 458 [Source:RGD Symbol%3BAcc:1559684]
rn6_v1_chr20_-_32269145_32269145	0.0263726	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000446|Ddx50|ENSRNOG00000000396|DExD-box helicase 50 [Source:RGD Symbol%3BAcc:1310934]
rn6_v1_chr3_-_72445775_72445775	0.0263184	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033427|P2rx3|ENSRNOG00000008552|purinergic receptor P2X 3 [Source:RGD Symbol%3BAcc:620253]	ENSRNOT00000077573|P2rx3|ENSRNOG00000008552|purinergic receptor P2X 3 [Source:RGD Symbol%3BAcc:620253]
rn6_v1_chr19_-_53688597_53688597	0.0261262	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074448|Zcchc14|ENSRNOG00000018226|zinc finger CCHC-type containing 14 [Source:RGD Symbol%3BAcc:1309494]
rn6_v1_chr17_+_29639079_29639079	0.0261101	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000021877|Rpp40|ENSRNOG00000016226|ribonuclease P/MRP 40 subunit [Source:RGD Symbol%3BAcc:1310228]
rn6_v1_chr13_-_70321722_70321752	0.0257666	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000092397|Smg7|ENSRNOG00000027962|SMG7 nonsense mediated mRNA decay factor [Source:RGD Symbol%3BAcc:1310761]	ENSRNOT00000092336|Smg7|ENSRNOG00000027962|SMG7 nonsense mediated mRNA decay factor [Source:RGD Symbol%3BAcc:1310761]	ENSRNOT00000092649|Smg7|ENSRNOG00000027962|SMG7 nonsense mediated mRNA decay factor [Source:RGD Symbol%3BAcc:1310761]	ENSRNOT00000092269|Smg7|ENSRNOG00000027962|SMG7 nonsense mediated mRNA decay factor [Source:RGD Symbol%3BAcc:1310761]
rn6_v1_chr10_+_47019326_47019326	0.025765	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006984|Smcr8|ENSRNOG00000005165|Smith-Magenis syndrome chromosome region%2C candidate 8 [Source:RGD Symbol%3BAcc:1564621]
rn6_v1_chr16_+_62483761_62483761	0.0254726	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000058805|Wrn|ENSRNOG00000015440|Werner syndrome RecQ like helicase [Source:RGD Symbol%3BAcc:1564788]
rn6_v1_chr11_+_64522130_64522130	0.0251251	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004315|Upk1b|ENSRNOG00000027380|uroplakin 1B [Source:RGD Symbol%3BAcc:1307806]
rn6_v1_chr10_+_105796680_105796680	0.0249725	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000264|Mfsd11|ENSRNOG00000000247|major facilitator superfamily domain containing 11 [Source:RGD Symbol%3BAcc:1307394]
rn6_v1_chr14_+_100217289_100217393	0.0248034	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077171|Cnrip1|ENSRNOG00000005326|cannabinoid receptor interacting protein 1 [Source:RGD Symbol%3BAcc:1308373]	ENSRNOT00000007104|Cnrip1|ENSRNOG00000005326|cannabinoid receptor interacting protein 1 [Source:RGD Symbol%3BAcc:1308373]
rn6_v1_chr4_-_117153907_117153907	0.0247658	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091374|Rab11fip5|ENSRNOG00000056009|RAB11 family interacting protein 5 [Source:RGD Symbol%3BAcc:1592069]
rn6_v1_chrX_-_1076850_1076850	0.0247649	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090671|LOC100363372|ENSRNOG00000057227|zinc finger protein 81 (HFZ20)-like [Source:RGD Symbol%3BAcc:2323171]
rn6_v1_chr12_+_48316143_48316143	0.0247446	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084511|Svop|ENSRNOG00000000693|SV2 related protein [Source:RGD Symbol%3BAcc:620277]
rn6_v1_chr1_-_94404211_94404211	0.0246604	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019463|Uri1|ENSRNOG00000014463|URI1%2C prefoldin-like chaperone [Source:RGD Symbol%3BAcc:1310358]
rn6_v1_chrX_+_14498119_14498119	0.0244802	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000051135|Xk|ENSRNOG00000003749|X-linked Kx blood group [Source:RGD Symbol%3BAcc:1359650]
rn6_v1_chr5_+_173660921_173660921	0.0242988	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066561|Noc2l|ENSRNOG00000021392|NOC2-like nucleolar associated transcriptional repressor [Source:RGD Symbol%3BAcc:1309387]
rn6_v1_chr17_-_10364503_10364570	0.0241851	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086380|Tspan17|ENSRNOG00000018122|tetraspanin 17 [Source:RGD Symbol%3BAcc:1311167]	ENSRNOT00000041709|Tspan17|ENSRNOG00000018122|tetraspanin 17 [Source:RGD Symbol%3BAcc:1311167]
rn6_v1_chr2_+_104416972_104416972	0.0241457	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017125|Trim55|ENSRNOG00000012723|tripartite motif-containing 55 [Source:RGD Symbol%3BAcc:1306943]
rn6_v1_chr5_+_148781222_148781222	0.0239359	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015831|Pum1|ENSRNOG00000011709|pumilio RNA-binding family member 1 [Source:RGD Symbol%3BAcc:1307190]
rn6_v1_chr19_+_38189605_38189605	0.0236897	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000275|Prmt7|ENSRNOG00000000258|protein arginine methyltransferase 7 [Source:RGD Symbol%3BAcc:1304869]
rn6_v1_chr2_-_226779266_226779266	0.023685	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019244|Fnbp1l|ENSRNOG00000013798|formin binding protein 1-like [Source:RGD Symbol%3BAcc:1305386]
rn6_v1_chr3_-_133232322_133232322	0.0236685	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034487|Esf1|ENSRNOG00000004777|ESF1 nucleolar pre-rRNA processing protein homolog [Source:RGD Symbol%3BAcc:1306067]
rn6_v1_chr1_+_192025357_192025357	0.0235343	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025072|Ubfd1|ENSRNOG00000018243|ubiquitin family domain containing 1 [Source:RGD Symbol%3BAcc:1306614]
rn6_v1_chr5_+_144581427_144581427	0.0235304	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015227|Clspn|ENSRNOG00000011332|claspin [Source:RGD Symbol%3BAcc:1309083]
rn6_v1_chr6_+_135156984_135157067	0.02348	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009709|Wdr20|ENSRNOG00000007333|WD repeat domain 20 [Source:RGD Symbol%3BAcc:1306499]	ENSRNOT00000082595|Wdr20|ENSRNOG00000007333|WD repeat domain 20 [Source:RGD Symbol%3BAcc:1306499]
rn6_v1_chr18_+_55828158_55828158	0.0232733	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026087|Rbm22|ENSRNOG00000019235|RNA binding motif protein 22 [Source:RGD Symbol%3BAcc:1305770]
rn6_v1_chr6_-_122239614_122239614	0.023059	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005015|Galc|ENSRNOG00000003759|galactosylceramidase [Source:RGD Symbol%3BAcc:1359384]
rn6_v1_chr1_-_241460868_241460868	0.023007	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000054776|RGD1560242|ENSRNOG00000036615|similar to RIKEN cDNA 1700028P14 [Source:RGD Symbol%3BAcc:1560242]
rn6_v1_chr18_-_17396805_17396805	0.0230029	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082963|Tpgs2|ENSRNOG00000054118|tubulin polyglutamylase complex subunit 2 [Source:RGD Symbol%3BAcc:1310571]
rn6_v1_chr7_-_117679219_117679219	0.0228962	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071522|Slc39a4|ENSRNOG00000014314|solute carrier family 39 member 4 [Source:RGD Symbol%3BAcc:1306701]
rn6_v1_chr10_-_14788617_14788617	0.0228924	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043626|Cacna1h|ENSRNOG00000033893|calcium voltage-gated channel subunit alpha1 H [Source:RGD Symbol%3BAcc:68943]
rn6_v1_chr2_+_86914989_86914995	0.0227111	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000085164|LOC100360380|ENSRNOG00000051606|zinc finger protein 457-like [Source:RGD Symbol%3BAcc:2322273]	ENSRNOT00000081966|LOC100360380|ENSRNOG00000051606|zinc finger protein 457-like [Source:RGD Symbol%3BAcc:2322273]
rn6_v1_chr10_+_10808823_10808823	0.0225578	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004298|Anks3|ENSRNOG00000003186|ankyrin repeat and sterile alpha motif domain containing 3 [Source:RGD Symbol%3BAcc:1305833]
rn6_v1_chr7_+_143897014_143897014	0.0225546	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017314|Espl1|ENSRNOG00000012835|extra spindle pole bodies like 1%2C separase [Source:RGD Symbol%3BAcc:1306266]
rn6_v1_chr1_-_214202853_214202853	0.0225301	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022954|Lmntd2|ENSRNOG00000017050|lamin tail domain containing 2 [Source:RGD Symbol%3BAcc:1307439]
rn6_v1_chr10_+_63405596_63405596	0.0221714	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000077063|Gosr1|ENSRNOG00000003971|golgi SNAP receptor complex member 1 [Source:RGD Symbol%3BAcc:71093]
rn6_v1_chr5_+_61734118_61734118	0.0221011	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030825|Ncbp1|ENSRNOG00000023605|nuclear cap binding protein subunit 1 [Source:RGD Symbol%3BAcc:1308973]
rn6_v1_chr9_-_16351503_16351503	0.0220874	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000091215|AABR07066792.1|ENSRNOG00000054698|
rn6_v1_chr5_-_50142724_50142724	0.0219696	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081150|Slc35a1|ENSRNOG00000008908|solute carrier family 35 member A1 [Source:RGD Symbol%3BAcc:1311359]
rn6_v1_chr10_+_74886985_74886985	0.0219203	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009943|Mtmr4|ENSRNOG00000007496|myotubularin related protein 4 [Source:RGD Symbol%3BAcc:1310306]
rn6_v1_chr14_+_81837809_81837809	0.0218867	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020576|Haus3|ENSRNOG00000015255|HAUS augmin-like complex%2C subunit 3 [Source:RGD Symbol%3BAcc:1591723]
rn6_v1_chr18_-_56728185_56728185	0.0218834	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066048|Ppargc1b|ENSRNOG00000017503|PPARG coactivator 1 beta [Source:RGD Symbol%3BAcc:727948]
rn6_v1_chr17_+_72240802_72240852	0.0217473	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025993|Atp5c1|ENSRNOG00000019223|ATP synthase%2C H+ transporting%2C mitochondrial F1 complex%2C gamma polypeptide 1 [Source:RGD Symbol%3BAcc:620011]	ENSRNOT00000090453|Atp5c1|ENSRNOG00000019223|ATP synthase%2C H+ transporting%2C mitochondrial F1 complex%2C gamma polypeptide 1 [Source:RGD Symbol%3BAcc:620011]
rn6_v1_chr10_-_672196_672196	0.0215925	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000044108|Abcc1|ENSRNOG00000022305|ATP binding cassette subfamily C member 1 [Source:RGD Symbol%3BAcc:3112]
rn6_v1_chr6_-_7961207_7961207	0.021465	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007174|Abcg5|ENSRNOG00000005250|ATP binding cassette subfamily G member 5 [Source:RGD Symbol%3BAcc:620298]
rn6_v1_chr14_-_3262696_3262696	0.0214441	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000002824|LOC689986|ENSRNOG00000047876|hypothetical protein LOC689986 [Source:RGD Symbol%3BAcc:1586315]
rn6_v1_chr4_-_22661685_22661722	0.0214083	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061342|Slc25a40|ENSRNOG00000022837|solute carrier family 25%2C member 40 [Source:RGD Symbol%3BAcc:1308774]	ENSRNOT00000030352|Slc25a40|ENSRNOG00000022837|solute carrier family 25%2C member 40 [Source:RGD Symbol%3BAcc:1308774]
rn6_v1_chr8_-_96266342_96266342	0.0213603	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078891|Syncrip|ENSRNOG00000000204|synaptotagmin binding%2C cytoplasmic RNA interacting protein [Source:RGD Symbol%3BAcc:1305683]
rn6_v1_chr19_-_37796089_37796089	0.0213257	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024891|Ranbp10|ENSRNOG00000018000|RAN binding protein 10 [Source:RGD Symbol%3BAcc:1311587]
rn6_v1_chr11_-_60931794_60931794	0.0207613	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000018473|Nepro|ENSRNOG00000013721|nucleolus and neural progenitor protein [Source:RGD Symbol%3BAcc:1311458]
rn6_v1_chr7_-_122247139_122247139	0.0200557	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064515|Mkl1|ENSRNOG00000018803|megakaryoblastic leukemia (translocation) 1 [Source:RGD Symbol%3BAcc:1304873]
rn6_v1_chr3_-_9636058_9636058	0.0200533	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024953|RGD1311084|ENSRNOG00000018486|similar to 1700113K14Rik protein [Source:RGD Symbol%3BAcc:1311084]
rn6_v1_chr2_-_103979586_103979586	0.0200492	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000018548|Armc1|ENSRNOG00000013253|armadillo repeat containing 1 [Source:RGD Symbol%3BAcc:1560393]
rn6_v1_chr6_-_111295917_111295994	0.0196821	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000073428|Vipas39|ENSRNOG00000049223|VPS33B interacting protein%2C apical-basolateral polarity regulator%2C spe-39 homolog [Source:RGD Symbol%3BAcc:1589291]	ENSRNOT00000079373|Vipas39|ENSRNOG00000049223|VPS33B interacting protein%2C apical-basolateral polarity regulator%2C spe-39 homolog [Source:RGD Symbol%3BAcc:1589291]
rn6_v1_chr12_+_38274297_38274349	0.0196733	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087905|Rsrc2|ENSRNOG00000001238|arginine and serine rich coiled-coil 2 [Source:RGD Symbol%3BAcc:1564882]	ENSRNOT00000057788|Rsrc2|ENSRNOG00000001238|arginine and serine rich coiled-coil 2 [Source:RGD Symbol%3BAcc:1564882]
rn6_v1_chr3_-_48604097_48604097	0.0195314	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009620|Ifih1|ENSRNOG00000006227|interferon induced with helicase C domain 1 [Source:RGD Symbol%3BAcc:1560496]
rn6_v1_chr12_-_38274036_38274036	0.0193412	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000063990|Kntc1|ENSRNOG00000033658|kinetochore associated 1 [Source:RGD Symbol%3BAcc:1307905]
rn6_v1_chr13_+_51229890_51229890	0.0190247	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000060669|Cyb5r1|ENSRNOG00000003973|cytochrome b5 reductase 1 [Source:RGD Symbol%3BAcc:1306084]
rn6_v1_chr16_-_71319449_71319449	0.0187311	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000029284|Fgfr1|ENSRNOG00000016050|Fibroblast growth factor receptor 1 [Source:RGD Symbol%3BAcc:620713]
rn6_v1_chr7_-_139196416_139196416	0.0186373	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083926|Rpap3|ENSRNOG00000053405|RNA polymerase II associated protein 3 [Source:RGD Symbol%3BAcc:1303036]
rn6_v1_chrX_-_15504165_15504165	0.0184563	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006233|Otud5|ENSRNOG00000008764|OTU deubiquitinase 5 [Source:RGD Symbol%3BAcc:1563027]
rn6_v1_chr10_-_56624526_56624526	0.0184253	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024973|Acadvl|ENSRNOG00000018114|acyl-CoA dehydrogenase%2C very long chain [Source:RGD Symbol%3BAcc:2014]
rn6_v1_chr5_+_152333043_152333043	0.0182607	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000021342|Ubxn11|ENSRNOG00000015476|UBX domain protein 11 [Source:RGD Symbol%3BAcc:620769]
rn6_v1_chr5_-_136053210_136053210	0.0180959	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025903|Kif2c|ENSRNOG00000019100|kinesin family member 2C [Source:RGD Symbol%3BAcc:620239]
rn6_v1_chr9_-_92435363_92435365	0.0179586	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000093735|Trip12|ENSRNOG00000016963|thyroid hormone receptor interactor 12 [Source:RGD Symbol%3BAcc:1306607]	ENSRNOT00000022822|Trip12|ENSRNOG00000016963|thyroid hormone receptor interactor 12 [Source:RGD Symbol%3BAcc:1306607]	ENSRNOT00000093245|Trip12|ENSRNOG00000016963|thyroid hormone receptor interactor 12 [Source:RGD Symbol%3BAcc:1306607]
rn6_v1_chr8_-_22111863_22111863	0.0179053	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000046983|Raver1|ENSRNOG00000020710|ribonucleoprotein%2C PTB-binding 1 [Source:RGD Symbol%3BAcc:1359190]
rn6_v1_chr2_+_199199845_199199845	0.0178077	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020932|LOC100909441|ENSRNOG00000015544|tubulin alpha-1C chain-like [Source:RGD Symbol%3BAcc:6503589]
rn6_v1_chr1_-_201082100_201082100	0.0173997	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000067315|Ate1|ENSRNOG00000024414|arginyltransferase 1 [Source:RGD Symbol%3BAcc:1309335]
rn6_v1_chr16_-_2367069_2367069	0.0173832	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079625|Pde12|ENSRNOG00000059442|phosphodiesterase 12 [Source:RGD Symbol%3BAcc:1310975]
rn6_v1_chr5_+_157820908_157820908	0.0170485	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000068168|Emc1|ENSRNOG00000018097|ER membrane protein complex subunit 1 [Source:RGD Symbol%3BAcc:1310427]
rn6_v1_chr7_-_117259791_117259791	0.0168423	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086550|Plec|ENSRNOG00000023781|plectin [Source:RGD Symbol%3BAcc:621649]
rn6_v1_chr7_+_122203532_122203532	0.0167619	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025382|Sgsm3|ENSRNOG00000018745|small G protein signaling modulator 3 [Source:RGD Symbol%3BAcc:735113]
rn6_v1_chrX_+_68891227_68891227	0.0167095	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009635|Efnb1|ENSRNOG00000006877|ephrin B1 [Source:RGD Symbol%3BAcc:2540]
rn6_v1_chr4_+_77592016_77592016	0.0165678	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009054|Zfp212|ENSRNOG00000006711|Zinc finger protein 212 [Source:RGD Symbol%3BAcc:1307836]
rn6_v1_chr12_-_21720094_21720094	0.0164497	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000032838|LOC100910636|ENSRNOG00000024425|zinc finger CW-type PWWP domain protein 1-like [Source:RGD Symbol%3BAcc:6497217]
rn6_v1_chr3_+_121632043_121632043	0.016167	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024882|Polr1b|ENSRNOG00000018349|RNA polymerase I subunit B [Source:RGD Symbol%3BAcc:620822]
rn6_v1_chr4_-_100465106_100465112	0.0161026	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000086725|Elmod3|ENSRNOG00000038102|ELMO domain containing 3 [Source:RGD Symbol%3BAcc:1306408]	ENSRNOT00000057989|Elmod3|ENSRNOG00000038102|ELMO domain containing 3 [Source:RGD Symbol%3BAcc:1306408]
rn6_v1_chr3_+_67538289_67538289	0.0160462	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009839|Dnajc10|ENSRNOG00000006803|DnaJ heat shock protein family (Hsp40) member C10 [Source:RGD Symbol%3BAcc:1307813]
rn6_v1_chr3_+_11114551_11114551	0.0160437	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013507|Plpp7|ENSRNOG00000010068|phospholipid phosphatase 7 [Source:RGD Symbol%3BAcc:1305821]
rn6_v1_chr18_-_48384645_48384645	0.0159356	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000023485|Ppic|ENSRNOG00000017416|peptidylprolyl isomerase C [Source:RGD Symbol%3BAcc:1303221]
rn6_v1_chr5_-_164348713_164348713	0.015932	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087044|LOC500584|ENSRNOG00000054488|similar to casein kinase 1%2C gamma 3 isoform 2 [Source:RGD Symbol%3BAcc:1598209]
rn6_v1_chr5_+_143063099_143063099	0.0155485	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000037510|Snip1|ENSRNOG00000024889|Smad nuclear interacting protein 1 [Source:RGD Symbol%3BAcc:1359268]
rn6_v1_chr13_+_26172243_26172243	0.015518	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003840|Phlpp1|ENSRNOG00000002821|PH domain and leucine rich repeat protein phosphatase 1 [Source:RGD Symbol%3BAcc:621308]
rn6_v1_chr5_+_78384444_78384444	0.0154781	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034978|LOC500475|ENSRNOG00000024506|similar to hypothetical protein 4933430I17 [Source:RGD Symbol%3BAcc:1563460]
rn6_v1_chr18_-_27424090_27424090	0.0151658	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087968|Brd8|ENSRNOG00000020340|bromodomain containing 8 [Source:RGD Symbol%3BAcc:1307003]
rn6_v1_chr7_+_122896871_122896871	0.0151431	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034998|L3mbtl2|ENSRNOG00000024743|L3MBTL2 polycomb repressive complex 1 subunit [Source:RGD Symbol%3BAcc:1308569]
rn6_v1_chr14_+_79339258_79339258	0.0151281	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000058414|Tbc1d14|ENSRNOG00000006400|TBC1 domain family%2C member 14 [Source:RGD Symbol%3BAcc:1309993]
rn6_v1_chr3_-_170040953_170040953	0.0150819	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005866|Cbln4|ENSRNOG00000004372|cerebellin 4 precursor [Source:RGD Symbol%3BAcc:1589642]
rn6_v1_chrX_-_105835327_105835327	0.0150532	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042714|Zmat1|ENSRNOG00000024135|zinc finger%2C matrin-type 1 [Source:RGD Symbol%3BAcc:1565344]
rn6_v1_chr3_-_163748996_163748996	0.0149662	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010633|Stau1|ENSRNOG00000007781|staufen double-stranded RNA binding protein 1 [Source:RGD Symbol%3BAcc:621778]
rn6_v1_chr15_+_61662264_61662264	0.0147871	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000072969|Mtrf1|ENSRNOG00000047106|mitochondrial translation release factor 1 [Source:RGD Symbol%3BAcc:1584329]
rn6_v1_chr7_-_139649286_139649286	0.0146322	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080056|Senp1|ENSRNOG00000022260|SUMO1/sentrin specific peptidase 1 [Source:RGD Symbol%3BAcc:1310275]
rn6_v1_chr1_+_99486253_99486253	0.0145708	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074820|LOC102546648|ENSRNOG00000023233|uncharacterized LOC102546648 [Source:RGD Symbol%3BAcc:7541917]
rn6_v1_chr17_+_77176716_77176716	0.0144039	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083342|Optn|ENSRNOG00000017941|optineurin [Source:RGD Symbol%3BAcc:628886]	ENSRNOT00000024162|Optn|ENSRNOG00000017941|optineurin [Source:RGD Symbol%3BAcc:628886]
rn6_v1_chr14_-_2700977_2700977	0.0139491	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000000086|Mtf2|ENSRNOG00000000075|metal response element binding transcription factor 2 [Source:RGD Symbol%3BAcc:1304727]
rn6_v1_chr13_-_15395617_15395617	0.0138249	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000046060|LOC304725|ENSRNOG00000029556|similar to contactin associated protein-like 5 isoform 1 [Source:RGD Symbol%3BAcc:1592077]
rn6_v1_chr2_+_240495371_240495371	0.0137326	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000031425|Slc9b2|ENSRNOG00000023404|solute carrier family 9 member B2 [Source:RGD Symbol%3BAcc:1598112]
rn6_v1_chr6_-_75996216_75996216	0.013373	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009180|RGD1304624|ENSRNOG00000006986|similar to RIKEN cDNA 2700097O09 [Source:RGD Symbol%3BAcc:1304624]
rn6_v1_chr12_-_47510263_47510263	0.0133294	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000034129|LOC691311|ENSRNOG00000021364|hypothetical protein LOC691311 [Source:RGD Symbol%3BAcc:1585103]
rn6_v1_chr12_-_37425596_37425596	0.0132049	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084553|Tctn2|ENSRNOG00000052704|tectonic family member 2 [Source:RGD Symbol%3BAcc:1591895]
rn6_v1_chr12_+_11215886_11215893	0.0131555	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076896|Ptcd1|ENSRNOG00000000987|pentatricopeptide repeat domain 1 [Source:RGD Symbol%3BAcc:1311473]	ENSRNOT00000060924|Ptcd1|ENSRNOG00000000987|pentatricopeptide repeat domain 1 [Source:RGD Symbol%3BAcc:1311473]
rn6_v1_chr6_+_7961413_7961523	0.0129114	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007638|Abcg8|ENSRNOG00000005420|ATP binding cassette subfamily G member 8 [Source:RGD Symbol%3BAcc:620300]	ENSRNOT00000061871|Abcg8|ENSRNOG00000005420|ATP binding cassette subfamily G member 8 [Source:RGD Symbol%3BAcc:620300]
rn6_v1_chr6_-_26771164_26771164	0.0128749	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009090|Tcf23|ENSRNOG00000025736|transcription factor 23 [Source:RGD Symbol%3BAcc:1586500]
rn6_v1_chr1_+_84293102_84293102	0.0123183	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028468|Sertad1|ENSRNOG00000024363|SERTA domain containing 1 [Source:RGD Symbol%3BAcc:1549778]
rn6_v1_chr13_-_82298404_82298404	0.0118866	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087487|LOC498265|ENSRNOG00000059276|similar to hypothetical protein FLJ10706 [Source:RGD Symbol%3BAcc:1563470]
rn6_v1_chr2_+_62150493_62150493	0.0117496	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080241|Zfr|ENSRNOG00000011627|zinc finger RNA binding protein [Source:RGD Symbol%3BAcc:1311890]
rn6_v1_chr1_+_260093641_260093641	0.0117157	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019521|Ccnj|ENSRNOG00000014551|cyclin J [Source:RGD Symbol%3BAcc:1306399]
rn6_v1_chr12_+_38345456_38345456	0.011527	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000001685|Clip1|ENSRNOG00000001247|CAP-GLY domain containing linker protein 1 [Source:RGD Symbol%3BAcc:67404]
rn6_v1_chr19_+_38039729_38039729	0.0113008	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089783|Nfatc3|ENSRNOG00000054264|nuclear factor of activated T-cells 3 [Source:RGD Symbol%3BAcc:1308692]
rn6_v1_chr3_-_5693147_5693147	0.0111847	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008660|Fam163b|ENSRNOG00000006591|family with sequence similarity 163%2C member B [Source:RGD Symbol%3BAcc:1597714]
rn6_v1_chr17_+_6840463_6840463	0.0111568	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000061233|Ubqln1|ENSRNOG00000019282|ubiquilin 1 [Source:RGD Symbol%3BAcc:620745]
rn6_v1_chr3_-_11382004_11382043	0.0111138	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000047921|Dnm1|ENSRNOG00000033835|dynamin 1 [Source:RGD Symbol%3BAcc:71096]	ENSRNOT00000064039|Dnm1|ENSRNOG00000033835|dynamin 1 [Source:RGD Symbol%3BAcc:71096]
rn6_v1_chr5_+_78267248_78267248	0.0111109	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019910|Prpf4|ENSRNOG00000014777|pre-mRNA processing factor 4 [Source:RGD Symbol%3BAcc:1311303]
rn6_v1_chr10_-_10831782_10831782	0.0108601	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004314|Nudt16l1|ENSRNOG00000003224|nudix hydrolase 16 like 1 [Source:RGD Symbol%3BAcc:1561451]
rn6_v1_chr9_+_100511610_100511610	0.0106557	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033233|Ano7|ENSRNOG00000023427|anoctamin 7 [Source:RGD Symbol%3BAcc:1302987]
rn6_v1_chr7_+_60316045_60316045	0.0105521	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000064594|Lyc2|ENSRNOG00000034139|lysozyme C type 2 [Source:RGD Symbol%3BAcc:1593616]
rn6_v1_chr15_-_4026637_4026637	0.0101592	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012372|Chchd1|ENSRNOG00000009297|coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:RGD Symbol%3BAcc:1307134]
rn6_v1_chr9_+_81644355_81644355	0.00998771	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071700|Catip|ENSRNOG00000037835|ciliogenesis associated TTC17 interacting protein [Source:RGD Symbol%3BAcc:1596071]
rn6_v1_chr5_-_160405050_160405050	0.00997674	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000081899|Ctrc|ENSRNOG00000013745|chymotrypsin C [Source:RGD Symbol%3BAcc:1308379]
rn6_v1_chr5_-_165442048_165442048	0.00968386	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000049822|Tardbp|ENSRNOG00000012455|TAR DNA binding protein [Source:RGD Symbol%3BAcc:1310906]
rn6_v1_chr10_-_15459897_15459897	0.00954761	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027518|Decr2|ENSRNOG00000050424|2%2C4-dienoyl-CoA reductase 2 [Source:RGD Symbol%3BAcc:71002]
rn6_v1_chr8_+_39878955_39878955	0.00945718	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000060300|LOC100911068|ENSRNOG00000050964|roundabout homolog 4-like [Source:RGD Symbol%3BAcc:6494870]
rn6_v1_chr5_+_128629942_128630086	0.00940166	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010462|Nrdc|ENSRNOG00000007111|nardilysin convertase [Source:RGD Symbol%3BAcc:3210]	ENSRNOT00000010440|Nrdc|ENSRNOG00000007111|nardilysin convertase [Source:RGD Symbol%3BAcc:3210]
rn6_v1_chr9_+_81559605_81559605	0.00924532	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089698|Gpbar1|ENSRNOG00000058260|G protein-coupled bile acid receptor 1 [Source:RGD Symbol%3BAcc:631400]
rn6_v1_chr10_-_85709568_85709568	0.00895904	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005426|Cwc25|ENSRNOG00000004091|CWC25 spliceosome-associated protein homolog [Source:RGD Symbol%3BAcc:1305258]
rn6_v1_chr8_-_39093277_39093277	0.00891021	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043344|LOC100911068|ENSRNOG00000049289|roundabout homolog 4-like [Source:RGD Symbol%3BAcc:6494870]
rn6_v1_chr12_+_9846398_9846398	0.0087674	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075162|Mtif3|ENSRNOG00000047329|mitochondrial translational initiation factor 3 [Source:RGD Symbol%3BAcc:1592673]
rn6_v1_chr16_+_10554136_10554136	0.00871462	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000079030|Syt15|ENSRNOG00000051688|synaptotagmin 15 [Source:RGD Symbol%3BAcc:727964]
rn6_v1_chr3_-_118137125_118137191	0.00869626	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012287|Cops2|ENSRNOG00000008744|COP9 signalosome subunit 2 [Source:RGD Symbol%3BAcc:628791]	ENSRNOT00000084154|Cops2|ENSRNOG00000008744|COP9 signalosome subunit 2 [Source:RGD Symbol%3BAcc:628791]
rn6_v1_chr1_+_128924966_128924966	0.0086275	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019267|Igf1r|ENSRNOG00000014187|insulin-like growth factor 1 receptor [Source:RGD Symbol%3BAcc:2869]
rn6_v1_chr4_+_98457810_98457810	0.00860583	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000074175|AABR07060872.1|ENSRNOG00000049829|
rn6_v1_chr4_+_10020349_10020349	0.00836864	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000065039|Fbxl13|ENSRNOG00000043035|F-box and leucine-rich repeat protein 13 [Source:RGD Symbol%3BAcc:1642425]
rn6_v1_chr10_+_68588789_68588789	0.00812349	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000049614|AABR07030122.1|ENSRNOG00000030217|
rn6_v1_chr10_-_7077443_7077443	0.0080669	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003542|Pmm2|ENSRNOG00000002615|phosphomannomutase 2 [Source:RGD Symbol%3BAcc:1309366]
rn6_v1_chr9_+_93172673_93172673	0.00779011	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000088525|Armc9|ENSRNOG00000025418|armadillo repeat containing 9 [Source:RGD Symbol%3BAcc:1305615]
rn6_v1_chr5_+_172367398_172367398	0.00772506	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019028|Pank4|ENSRNOG00000014044|pantothenate kinase 4 [Source:RGD Symbol%3BAcc:628857]
rn6_v1_chr6_-_76079664_76079664	0.00770231	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000033533|Ppp2r3c|ENSRNOG00000023591|protein phosphatase 2%2C regulatory subunit B''%2C gamma [Source:RGD Symbol%3BAcc:1309207]
rn6_v1_chr3_+_118136838_118136838	0.00768438	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000083356|Galk2|ENSRNOG00000009289|galactokinase 2 [Source:RGD Symbol%3BAcc:1308691]
rn6_v1_chr19_-_25163957_25164086	0.00765322	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000007726|Il27ra|ENSRNOG00000005747|interleukin 27 receptor subunit alpha [Source:RGD Symbol%3BAcc:1305029]	ENSRNOT00000085630|Il27ra|ENSRNOG00000005747|interleukin 27 receptor subunit alpha [Source:RGD Symbol%3BAcc:1305029]
rn6_v1_chr5_-_150390099_150390099	0.00763877	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014479|Ythdf2|ENSRNOG00000010892|YTH N(6)-methyladenosine RNA binding protein 2 [Source:RGD Symbol%3BAcc:1311321]
rn6_v1_chr3_-_151258580_151258580	0.00742803	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026120|Edem2|ENSRNOG00000019299|ER degradation enhancing alpha-mannosidase like protein 2 [Source:RGD Symbol%3BAcc:1303074]
rn6_v1_chrX_+_65563122_65563122	0.0073311	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017312|Heph|ENSRNOG00000012294|hephaestin [Source:RGD Symbol%3BAcc:71060]
rn6_v1_chr2_+_243820661_243820661	0.00728499	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000090526|Eif4e|ENSRNOG00000052343|eukaryotic translation initiation factor 4E [Source:RGD Symbol%3BAcc:69647]
rn6_v1_chr17_+_78735598_78735598	0.00705878	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000020854|Hspa14|ENSRNOG00000015212|heat shock protein family A%2C member 14 [Source:RGD Symbol%3BAcc:1303296]
rn6_v1_chrX_+_140175861_140175861	0.0070476	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000071222|Ccdc160|ENSRNOG00000046484|coiled-coil domain containing 160 [Source:RGD Symbol%3BAcc:1597791]
rn6_v1_chr1_+_213676954_213676954	0.00681359	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000050551|Nlrp6|ENSRNOG00000045677|NLR family%2C pyrin domain containing 6 [Source:RGD Symbol%3BAcc:708549]
rn6_v1_chr8_+_116318963_116318963	0.00628749	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000036556|Tusc2|ENSRNOG00000021528|tumor suppressor candidate 2 [Source:RGD Symbol%3BAcc:1561664]
rn6_v1_chr7_-_117786872_117786872	0.00622971	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000030517|Lrrc24|ENSRNOG00000016204|leucine rich repeat containing 24 [Source:RGD Symbol%3BAcc:1308720]
rn6_v1_chr14_+_62609484_62609484	0.00606118	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003017|Guf1|ENSRNOG00000002207|GUF1 homolog%2C GTPase [Source:RGD Symbol%3BAcc:1310774]
rn6_v1_chr18_+_56887722_56887722	0.00591204	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078783|Csnk1a1|ENSRNOG00000017106|casein kinase 1%2C alpha 1 [Source:RGD Symbol%3BAcc:71098]
rn6_v1_chr16_+_47717951_47717951	0.00585365	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000018689|Ing2|ENSRNOG00000013480|inhibitor of growth family%2C member 2 [Source:RGD Symbol%3BAcc:1307347]
rn6_v1_chr1_+_254697247_254697247	0.00566509	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025412|Rpp30|ENSRNOG00000018718|ribonuclease P/MRP subunit p30 [Source:RGD Symbol%3BAcc:1595116]
rn6_v1_chr10_+_31324512_31324512	0.00554577	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000008559|Fndc9|ENSRNOG00000006549|fibronectin type III domain containing 9 [Source:RGD Symbol%3BAcc:2318580]
rn6_v1_chr11_+_70967223_70967223	0.00541603	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000087633|Iqcg|ENSRNOG00000026420|IQ motif containing G [Source:RGD Symbol%3BAcc:1311606]
rn6_v1_chr1_-_221269017_221269042	0.00514381	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028363|Dpf2|ENSRNOG00000020892|double PHD fingers 2 [Source:RGD Symbol%3BAcc:1311699]	ENSRNOT00000084396|Dpf2|ENSRNOG00000020892|double PHD fingers 2 [Source:RGD Symbol%3BAcc:1311699]
rn6_v1_chr6_-_135304422_135304422	0.0051373	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010598|Cinp|ENSRNOG00000008035|cyclin-dependent kinase 2-interacting protein [Source:RGD Symbol%3BAcc:1563395]
rn6_v1_chr7_+_126028350_126028350	0.00503342	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000042412|Ribc2|ENSRNOG00000033502|RIB43A domain with coiled-coils 2 [Source:RGD Symbol%3BAcc:1309033]
rn6_v1_chr3_+_7051695_7051695	0.0049065	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013548|Mrps2|ENSRNOG00000010164|mitochondrial ribosomal protein S2 [Source:RGD Symbol%3BAcc:1309116]
rn6_v1_chr6_+_107428508_107428508	0.0048133	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013431|RGD1307704|ENSRNOG00000010126|similar to RIKEN cDNA 2410016O06 [Source:RGD Symbol%3BAcc:1307704]
rn6_v1_chr10_+_86711240_86711240	0.00462011	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000012812|Msl1|ENSRNOG00000009643|male specific lethal 1 homolog [Source:RGD Symbol%3BAcc:1564778]
rn6_v1_chrX_+_124631881_124631881	0.00459368	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000009329|Atp1b4|ENSRNOG00000007059|ATPase Na+/K+ transporting family member beta 4 [Source:RGD Symbol%3BAcc:620994]
rn6_v1_chr3_+_176475893_176475893	0.00445822	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013900|Arfgap1|ENSRNOG00000043150|ADP-ribosylation factor GTPase activating protein 1 [Source:RGD Symbol%3BAcc:708452]
rn6_v1_chrX_-_144001727_144001727	0.0044222	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000078404|RGD1560585|ENSRNOG00000060534|similar to RIKEN cDNA 1700001F22 [Source:RGD Symbol%3BAcc:1560585]
rn6_v1_chr10_-_89454681_89454681	0.00434741	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028109|Brca1|ENSRNOG00000020701|BRCA1%2C DNA repair associated [Source:RGD Symbol%3BAcc:2218]
rn6_v1_chr17_-_77340934_77340934	0.00413828	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024697|Sephs1|ENSRNOG00000018125|selenophosphate synthetase 1 [Source:RGD Symbol%3BAcc:1311182]
rn6_v1_chr3_-_154490851_154490851	0.00401066	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017213|Tti1|ENSRNOG00000012880|TELO2 interacting protein 1 [Source:RGD Symbol%3BAcc:1562582]
rn6_v1_chr6_+_104291340_104291340	0.00370903	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089313|Slc39a9|ENSRNOG00000005052|solute carrier family 39%2C member 9 [Source:RGD Symbol%3BAcc:1311236]
rn6_v1_chr4_-_156426760_156426760	0.00367124	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000014028|LOC103690024|ENSRNOG00000010407|peroxisomal targeting signal 1 receptor-like [Source:RGD Symbol%3BAcc:9150037]
rn6_v1_chr5_+_152681101_152681131	0.003662	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000076052|Stmn1|ENSRNOG00000016810|stathmin 1 [Source:RGD Symbol%3BAcc:2992]	ENSRNOT00000022574|Stmn1|ENSRNOG00000016810|stathmin 1 [Source:RGD Symbol%3BAcc:2992]
rn6_v1_chr18_+_64084795_64084795	0.00365811	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022410|Rnmt|ENSRNOG00000016698|RNA (guanine-7-) methyltransferase [Source:RGD Symbol%3BAcc:1309242]
rn6_v1_chr10_-_88389347_88389347	0.00363634	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022695|Klhl11|ENSRNOG00000016921|kelch-like family member 11 [Source:RGD Symbol%3BAcc:1306673]
rn6_v1_chr2_-_174012676_174012676	0.00350541	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000013585|Pdcd10|ENSRNOG00000010147|programmed cell death 10 [Source:RGD Symbol%3BAcc:1359329]
rn6_v1_chr15_+_61873056_61873056	0.00336701	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000017086|Sugt1|ENSRNOG00000012594|SGT1 homolog%2C MIS12 kinetochore complex assembly cochaperone [Source:RGD Symbol%3BAcc:1307550]
rn6_v1_chr19_-_39300893_39300893	0.00333864	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027695|Terf2|ENSRNOG00000020435|telomeric repeat binding factor 2 [Source:RGD Symbol%3BAcc:1310881]
rn6_v1_chr18_-_64084556_64084556	0.0032747	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000084902|Fam210a|ENSRNOG00000016740|family with sequence similarity 210%2C member A [Source:RGD Symbol%3BAcc:1359600]
rn6_v1_chrX_+_137197396_137197396	0.00324562	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000082227|RGD1566225|ENSRNOG00000055742|similar to RIKEN cDNA 1700001F22 [Source:RGD Symbol%3BAcc:1566225]
rn6_v1_chr16_-_76110553_76110553	0.00319171	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000043384|Mcph1|ENSRNOG00000028586|microcephalin 1 [Source:RGD Symbol%3BAcc:1560642]
rn6_v1_chr1_+_72757881_72757881	0.0031546	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000024400|Ppp6r1|ENSRNOG00000018090|protein phosphatase 6%2C regulatory subunit 1 [Source:RGD Symbol%3BAcc:1311409]
rn6_v1_chr14_+_7169519_7169519	0.00308238	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000003026|Klhl8|ENSRNOG00000002214|kelch-like family member 8 [Source:RGD Symbol%3BAcc:1304685]
rn6_v1_chr2_+_127625683_127625683	0.00302964	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000015474|Hspa4l|ENSRNOG00000010819|heat shock protein 4-like [Source:RGD Symbol%3BAcc:1306528]
rn6_v1_chr20_+_4852496_4852496	0.00288602	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000088936|Lta|ENSRNOG00000000838|lymphotoxin alpha [Source:RGD Symbol%3BAcc:3020]
rn6_v1_chr1_+_97712177_97712177	0.00270899	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027745|MGC114499|ENSRNOG00000027112|similar to RIKEN cDNA 4930433I11 gene [Source:RGD Symbol%3BAcc:1561885]
rn6_v1_chr1_+_220325352_220325352	0.00266182	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000027258|LOC108348098|ENSRNOG00000020117|breast cancer metastasis-suppressor 1 homolog [Source:RGD Symbol%3BAcc:11501278]
rn6_v1_chr7_+_2737765_2737765	0.00250668	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000004895|Cnpy2|ENSRNOG00000003549|canopy FGF signaling regulator 2 [Source:RGD Symbol%3BAcc:1589072]
rn6_v1_chr1_+_64114721_64114721	0.00247915	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080466|Tmc4|ENSRNOG00000059741|transmembrane channel-like 4 [Source:RGD Symbol%3BAcc:1304811]
rn6_v1_chr16_-_81797815_81797815	0.00244036	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000026666|Proz|ENSRNOG00000019700|protein Z%2C vitamin K-dependent plasma glycoprotein [Source:RGD Symbol%3BAcc:1308666]
rn6_v1_chr13_-_90832138_90832138	0.00228594	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000010930|Igsf9|ENSRNOG00000008054|immunoglobulin superfamily%2C member 9 [Source:RGD Symbol%3BAcc:1304566]
rn6_v1_chr17_-_955615_955615	0.00228147	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000022884|Fancc|ENSRNOG00000016889|Fanconi anemia%2C complementation group C [Source:RGD Symbol%3BAcc:2593]
rn6_v1_chr10_-_57653359_57653359	0.00220223	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000089638|Derl2|ENSRNOG00000055466|derlin 2 [Source:RGD Symbol%3BAcc:6496100]
rn6_v1_chr10_+_110469290_110469290	0.00216193	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000054919|Foxk2|ENSRNOG00000036663|forkhead box K2 [Source:RGD Symbol%3BAcc:1305408]
rn6_v1_chr8_+_22050222_22050222	0.0021066	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000028096|Icam5|ENSRNOG00000020694|intercellular adhesion molecule 5 [Source:RGD Symbol%3BAcc:1305039]
rn6_v1_chr7_-_2786856_2786949	0.0020947	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000047530|Coq10a|ENSRNOG00000029571|coenzyme Q10A [Source:RGD Symbol%3BAcc:1562447]	ENSRNOT00000086939|Coq10a|ENSRNOG00000029571|coenzyme Q10A [Source:RGD Symbol%3BAcc:1562447]
rn6_v1_chr1_-_143256591_143256591	0.00204525	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000080925|Cpeb1|ENSRNOG00000019161|cytoplasmic polyadenylation element binding protein 1 [Source:RGD Symbol%3BAcc:1310421]
rn6_v1_chr3_-_176865103_176865103	0.00203482	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019038|Arfrp1|ENSRNOG00000013992|ADP-ribosylation factor related protein 1 [Source:RGD Symbol%3BAcc:621683]
rn6_v1_chr5_-_74368186_74368186	0.00201364	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000059627|Ptpn3|ENSRNOG00000011425|protein tyrosine phosphatase%2C non-receptor type 3 [Source:RGD Symbol%3BAcc:1311363]
rn6_v1_chr6_+_104291071_104291071	0.00196163	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000006798|Slc39a9|ENSRNOG00000005052|solute carrier family 39%2C member 9 [Source:RGD Symbol%3BAcc:1311236]
rn6_v1_chr1_-_133559975_133559975	0.00182305	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000046645|Mctp2|ENSRNOG00000009932|multiple C2 and transmembrane domain containing 2 [Source:RGD Symbol%3BAcc:1562967]
rn6_v1_chr5_+_171441560_171441560	0.00141334	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019873|Wrap73|ENSRNOG00000014805|WD repeat containing%2C antisense to TP73 [Source:RGD Symbol%3BAcc:1359137]
rn6_v1_chr2_-_210413985_210413985	0.00105322	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025036|Strip1|ENSRNOG00000018293|striatin interacting protein 1 [Source:RGD Symbol%3BAcc:1564249]
rn6_v1_chr8_+_118392773_118392773	0.00079197	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000066305|LOC100911725|ENSRNOG00000048130|6-phosphofructo-2-kinase/fructose-2%2C6-bisphosphatase 4-like [Source:RGD Symbol%3BAcc:6491338]
rn6_v1_chr3_-_66394764_66394764	0.000743388	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000075832|Cerkl|ENSRNOG00000030212|ceramide kinase-like [Source:RGD Symbol%3BAcc:1561057]
rn6_v1_chr7_+_131330913_131330913	0.000601136	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000019672|Alg10|ENSRNOG00000014511|ALG10%2C alpha-1%2C2-glucosyltransferase [Source:RGD Symbol%3BAcc:708500]
rn6_v1_chr19_-_11263980_11263980	0.000529022	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000025086|Nup93|ENSRNOG00000018564|nucleoporin 93 [Source:RGD Symbol%3BAcc:1311525]
rn6_v1_chr8_-_132032971_132032971	0.000387744	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000005502|RGD1311745|ENSRNOG00000004135|similar to RIKEN cDNA 1110059G10 [Source:RGD Symbol%3BAcc:1311745]
rn6_v1_chr7_-_15821927_15821927	0.000188829	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000050658|LOC691422|ENSRNOG00000033056|similar to zinc finger protein 101 [Source:RGD Symbol%3BAcc:1583951]
rn6_v1_chr1_-_197821936_197821936	1.1739e-06	Hcfc1_Six5_Smarcc2_Zfp143	ENSRNOT00000055027|Cd19|ENSRNOG00000018311|CD19 molecule [Source:RGD Symbol%3BAcc:1309086]
