rn6_v1_chr16_-_73827488_73827488	0.222872	Hmga1	ENSRNOT00000064070|Ank1|ENSRNOG00000018241|ankyrin 1 [Source:RGD Symbol%3BAcc:1309620]
rn6_v1_chr11_-_31180616_31180642	0.174535	Hmga1	ENSRNOT00000065535|Synj1|ENSRNOG00000002051|synaptojanin 1 [Source:RGD Symbol%3BAcc:69434]	ENSRNOT00000052033|Synj1|ENSRNOG00000002051|synaptojanin 1 [Source:RGD Symbol%3BAcc:69434]	ENSRNOT00000002812|Synj1|ENSRNOG00000002051|synaptojanin 1 [Source:RGD Symbol%3BAcc:69434]
rn6_v1_chr6_+_73553210_73553210	0.153397	Hmga1	ENSRNOT00000006562|Akap6|ENSRNOG00000004841|A-kinase anchoring protein 6 [Source:RGD Symbol%3BAcc:69412]
rn6_v1_chr9_-_88816898_88816898	0.15156	Hmga1	ENSRNOT00000083667|Slc19a3|ENSRNOG00000057256|solute carrier family 19 member 3 [Source:RGD Symbol%3BAcc:1311413]
rn6_v1_chr2_-_208225888_208225888	0.142703	Hmga1	ENSRNOT00000054860|AABR07012775.1|ENSRNOG00000053044|
rn6_v1_chr7_+_74350479_74350479	0.142265	Hmga1	ENSRNOT00000089034|AABR07057495.1|ENSRNOG00000058166|
rn6_v1_chr13_-_61591139_61591139	0.141303	Hmga1	ENSRNOT00000005324|Rgs18|ENSRNOG00000003959|regulator of G-protein signaling 18 [Source:RGD Symbol%3BAcc:1306522]
rn6_v1_chr13_+_98311827_98311827	0.136426	Hmga1	ENSRNOT00000082844|Cdc42bpa|ENSRNOG00000002841|CDC42 binding protein kinase alpha [Source:RGD Symbol%3BAcc:621406]
rn6_v1_chr9_+_121831716_121831716	0.127447	Hmga1	ENSRNOT00000056250|Yes1|ENSRNOG00000037227|YES proto-oncogene 1%2C Src family tyrosine kinase [Source:RGD Symbol%3BAcc:3977]	ENSRNOT00000056251|Yes1|ENSRNOG00000037227|YES proto-oncogene 1%2C Src family tyrosine kinase [Source:RGD Symbol%3BAcc:3977]
rn6_v1_chr2_-_149444548_149444548	0.115877	Hmga1	ENSRNOT00000018600|P2ry12|ENSRNOG00000013902|purinergic receptor P2Y12 [Source:RGD Symbol%3BAcc:621681]
rn6_v1_chrX_-_158288109_158288109	0.112299	Hmga1	ENSRNOT00000072527|LOC103690175|ENSRNOG00000048650|PHD finger protein 6 [Source:RGD Symbol%3BAcc:9471618]
rn6_v1_chr4_-_16654811_16654811	0.110554	Hmga1	ENSRNOT00000008637|Pclo|ENSRNOG00000005726|piccolo (presynaptic cytomatrix protein) [Source:RGD Symbol%3BAcc:69406]
rn6_v1_chr16_-_70705128_70705128	0.109093	Hmga1	ENSRNOT00000071258|Rnf170|ENSRNOG00000045943|ring finger protein 170 [Source:RGD Symbol%3BAcc:1590842]
rn6_v1_chr18_+_30562178_30562178	0.106335	Hmga1	ENSRNOT00000040998|LOC108348771|ENSRNOG00000039471|protocadherin beta-16-like [Source:RGD Symbol%3BAcc:11492646]
rn6_v1_chr12_-_5773036_5773036	0.10536	Hmga1	ENSRNOT00000041365|Fry|ENSRNOG00000000894|FRY microtubule binding protein [Source:RGD Symbol%3BAcc:1307034]
rn6_v1_chr18_+_30864216_30864216	0.104898	Hmga1	ENSRNOT00000027015|Pcdhga7|ENSRNOG00000027290|protocadherin gamma subfamily A%2C 7 [Source:RGD Symbol%3BAcc:1305108]
rn6_v1_chr9_-_28732919_28732919	0.103437	Hmga1	ENSRNOT00000083915|Rims1|ENSRNOG00000011000|regulating synaptic membrane exocytosis 1 [Source:RGD Symbol%3BAcc:620000]
rn6_v1_chr14_-_28967980_28967980	0.101496	Hmga1	ENSRNOT00000048175|Adgrl3|ENSRNOG00000030149|adhesion G protein-coupled receptor L3 [Source:RGD Symbol%3BAcc:620836]
rn6_v1_chr19_-_22194740_22194740	0.100697	Hmga1	ENSRNOT00000086187|Phkb|ENSRNOG00000024101|phosphorylase kinase regulatory subunit beta [Source:RGD Symbol%3BAcc:620186]
rn6_v1_chr4_-_89281222_89281222	0.098371	Hmga1	ENSRNOT00000010898|Fam13a|ENSRNOG00000007947|family with sequence similarity 13%2C member A [Source:RGD Symbol%3BAcc:1309807]
rn6_v1_chr11_-_11213821_11213821	0.0973623	Hmga1	ENSRNOT00000093706|Robo2|ENSRNOG00000029598|roundabout guidance receptor 2 [Source:RGD Symbol%3BAcc:620167]
rn6_v1_chr4_+_120672152_120672152	0.0945481	Hmga1	ENSRNOT00000077231|Mgll|ENSRNOG00000014508|monoglyceride lipase [Source:RGD Symbol%3BAcc:71039]
rn6_v1_chrX_-_76708878_76708878	0.0933468	Hmga1	ENSRNOT00000045534|Atrx|ENSRNOG00000046897|ATRX%2C chromatin remodeler [Source:RGD Symbol%3BAcc:619795]
rn6_v1_chr2_+_186980992_186980992	0.0930208	Hmga1	ENSRNOT00000020717|Arhgef11|ENSRNOG00000015026|Rho guanine nucleotide exchange factor 11 [Source:RGD Symbol%3BAcc:619705]
rn6_v1_chr9_-_73799427_73799427	0.0910851	Hmga1	ENSRNOT00000067589|Kansl1l|ENSRNOG00000028149|KAT8 regulatory NSL complex subunit 1-like [Source:RGD Symbol%3BAcc:1590799]
rn6_v1_chr6_+_27887797_27887797	0.0888896	Hmga1	ENSRNOT00000015827|Asxl2|ENSRNOG00000011908|additional sex combs like 2%2C transcriptional regulator [Source:RGD Symbol%3BAcc:1304710]
rn6_v1_chrX_-_10031167_10031167	0.0885432	Hmga1	ENSRNOT00000060988|Gpr34|ENSRNOG00000039759|G protein-coupled receptor 34 [Source:RGD Symbol%3BAcc:1563681]
rn6_v1_chr4_-_135069970_135069970	0.0872961	Hmga1	ENSRNOT00000008221|Cntn3|ENSRNOG00000006144|contactin 3 [Source:RGD Symbol%3BAcc:3253]
rn6_v1_chr2_+_231941794_231941794	0.0872195	Hmga1	ENSRNOT00000091475|AABR07013288.4|ENSRNOG00000053387|
rn6_v1_chr13_-_90710148_90710287	0.0828554	Hmga1	ENSRNOT00000010113|Kcnj9|ENSRNOG00000007645|potassium voltage-gated channel subfamily J member 9 [Source:RGD Symbol%3BAcc:621440]	ENSRNOT00000080638|Kcnj9|ENSRNOG00000007645|potassium voltage-gated channel subfamily J member 9 [Source:RGD Symbol%3BAcc:621440]
rn6_v1_chr3_-_66885085_66885094	0.0810344	Hmga1	ENSRNOT00000084299|Pde1a|ENSRNOG00000054212|phosphodiesterase 1A [Source:RGD Symbol%3BAcc:68329]	ENSRNOT00000090547|Pde1a|ENSRNOG00000054212|phosphodiesterase 1A [Source:RGD Symbol%3BAcc:68329]
rn6_v1_chr8_-_8524643_8524643	0.0795833	Hmga1	ENSRNOT00000009418|Cntn5|ENSRNOG00000007038|contactin 5 [Source:RGD Symbol%3BAcc:621302]
rn6_v1_chr3_+_150135821_150135821	0.0783121	Hmga1	ENSRNOT00000047286|Zfp341|ENSRNOG00000017086|zinc finger protein 341 [Source:RGD Symbol%3BAcc:1564726]
rn6_v1_chr2_+_186980793_186980793	0.0777662	Hmga1	ENSRNOT00000091336|Arhgef11|ENSRNOG00000015026|Rho guanine nucleotide exchange factor 11 [Source:RGD Symbol%3BAcc:619705]
rn6_v1_chr4_+_157705790_157705790	0.0766066	Hmga1	ENSRNOT00000025970|Mrpl51|ENSRNOG00000019165|mitochondrial ribosomal protein L51 [Source:RGD Symbol%3BAcc:1306686]
rn6_v1_chr1_-_67134827_67134827	0.0750424	Hmga1	ENSRNOT00000045214|Vom1r45|ENSRNOG00000028882|vomeronasal 1 receptor 45 [Source:RGD Symbol%3BAcc:1359121]
rn6_v1_chr5_+_116420690_116420690	0.0745296	Hmga1	ENSRNOT00000087089|Nfia|ENSRNOG00000006966|nuclear factor I/A [Source:RGD Symbol%3BAcc:3170]
rn6_v1_chrX_+_54062935_54062935	0.0744406	Hmga1	ENSRNOT00000004854|Tab3|ENSRNOG00000003643|TGF-beta activated kinase 1/MAP3K7 binding protein 3 [Source:RGD Symbol%3BAcc:1594527]
rn6_v1_chr13_+_98231326_98231326	0.0702155	Hmga1	ENSRNOT00000003837|Cdc42bpa|ENSRNOG00000002841|CDC42 binding protein kinase alpha [Source:RGD Symbol%3BAcc:621406]
rn6_v1_chr17_-_57394985_57394985	0.0697088	Hmga1	ENSRNOT00000019968|Epc1|ENSRNOG00000014834|enhancer of polycomb homolog 1 [Source:RGD Symbol%3BAcc:2324280]
rn6_v1_chrX_+_908044_908044	0.0683618	Hmga1	ENSRNOT00000072087|Zfp300|ENSRNOG00000046469|zinc finger protein 300 [Source:RGD Symbol%3BAcc:2321626]
rn6_v1_chr15_-_40542495_40542495	0.0681359	Hmga1	ENSRNOT00000063943|Nup58|ENSRNOG00000012644|nucleoporin 58 [Source:RGD Symbol%3BAcc:631334]
rn6_v1_chr7_+_80750725_80750725	0.0678538	Hmga1	ENSRNOT00000079962|Oxr1|ENSRNOG00000056487|oxidation resistance 1 [Source:RGD Symbol%3BAcc:621857]
rn6_v1_chr1_-_128287151_128287151	0.0664442	Hmga1	ENSRNOT00000084946|Mef2a|ENSRNOG00000047756|myocyte enhancer factor 2a [Source:RGD Symbol%3BAcc:1359360]	ENSRNOT00000089723|Mef2a|ENSRNOG00000047756|myocyte enhancer factor 2a [Source:RGD Symbol%3BAcc:1359360]
rn6_v1_chr16_+_50152008_50152008	0.0661453	Hmga1	ENSRNOT00000019237|Klkb1|ENSRNOG00000014118|kallikrein B1 [Source:RGD Symbol%3BAcc:67382]
rn6_v1_chr20_+_26755911_26755911	0.066017	Hmga1	ENSRNOT00000083017|Herc4|ENSRNOG00000061040|HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:RGD Symbol%3BAcc:1310971]
rn6_v1_chr5_+_2278357_2278357	0.0648117	Hmga1	ENSRNOT00000066590|Stau2|ENSRNOG00000042458|staufen double-stranded RNA binding protein 2 [Source:RGD Symbol%3BAcc:621479]
rn6_v1_chr13_+_44615553_44615553	0.0640987	Hmga1	ENSRNOT00000082439|Rab3gap1|ENSRNOG00000003953|RAB3 GTPase activating protein catalytic subunit 1 [Source:RGD Symbol%3BAcc:1306487]	ENSRNOT00000005289|Rab3gap1|ENSRNOG00000003953|RAB3 GTPase activating protein catalytic subunit 1 [Source:RGD Symbol%3BAcc:1306487]
rn6_v1_chr12_-_37682964_37682964	0.0632691	Hmga1	ENSRNOT00000001421|RGD1563482|ENSRNOG00000001073|similar to hypothetical protein FLJ38663 [Source:RGD Symbol%3BAcc:1563482]
rn6_v1_chr11_-_90406797_90406797	0.0627212	Hmga1	ENSRNOT00000073049|Snai2|ENSRNOG00000047699|snail family transcriptional repressor 2 [Source:RGD Symbol%3BAcc:3722]
rn6_v1_chr11_+_62584959_62584959	0.0614974	Hmga1	ENSRNOT00000071065|Gramd1c|ENSRNOG00000053406|GRAM domain containing 1C [Source:RGD Symbol%3BAcc:1305433]
rn6_v1_chr14_-_3288017_3288017	0.0610469	Hmga1	ENSRNOT00000080452|LOC689986|ENSRNOG00000047876|hypothetical protein LOC689986 [Source:RGD Symbol%3BAcc:1586315]
rn6_v1_chr14_-_81399353_81399353	0.0606676	Hmga1	ENSRNOT00000018340|Add1|ENSRNOG00000013039|adducin 1 [Source:RGD Symbol%3BAcc:2041]
rn6_v1_chr5_-_8864578_8864578	0.0590101	Hmga1	ENSRNOT00000008480|Cspp1|ENSRNOG00000021718|centrosome and spindle pole associated protein 1 [Source:RGD Symbol%3BAcc:1307055]
rn6_v1_chr2_+_196013799_196013799	0.0586282	Hmga1	ENSRNOT00000084023|Pogz|ENSRNOG00000053599|pogo transposable element with ZNF domain [Source:RGD Symbol%3BAcc:1309980]
rn6_v1_chr17_-_53713408_53713408	0.0582675	Hmga1	ENSRNOT00000022445|LOC100912163|ENSRNOG00000016391|AT-rich interactive domain-containing protein 4B-like [Source:RGD Symbol%3BAcc:6488837]
rn6_v1_chr15_-_19541815_19541815	0.0582474	Hmga1	ENSRNOT00000008372|Txndc16|ENSRNOG00000006334|thioredoxin domain containing 16 [Source:RGD Symbol%3BAcc:1306755]
rn6_v1_chr2_-_231648122_231648122	0.0549901	Hmga1	ENSRNOT00000014962|Ank2|ENSRNOG00000011076|ankyrin 2 [Source:RGD Symbol%3BAcc:620156]
rn6_v1_chr9_-_52830457_52830457	0.0541518	Hmga1	ENSRNOT00000073557|Slc40a1|ENSRNOG00000049995|solute carrier family 40 member 1 [Source:RGD Symbol%3BAcc:620180]
rn6_v1_chr8_-_90962470_90962470	0.0537925	Hmga1	ENSRNOT00000086426|Lca5|ENSRNOG00000009580|LCA5%2C lebercilin [Source:RGD Symbol%3BAcc:1308555]
rn6_v1_chr9_-_81772851_81772851	0.0536377	Hmga1	ENSRNOT00000032719|Usp37|ENSRNOG00000022720|ubiquitin specific peptidase 37 [Source:RGD Symbol%3BAcc:2319715]
rn6_v1_chr16_-_6404957_6404957	0.0527383	Hmga1	ENSRNOT00000048459|Cacna1d|ENSRNOG00000013147|calcium voltage-gated channel subunit alpha1 D [Source:RGD Symbol%3BAcc:70973]
rn6_v1_chr18_-_1828606_1828606	0.0513271	Hmga1	ENSRNOT00000033312|Esco1|ENSRNOG00000014031|establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:RGD Symbol%3BAcc:1596873]
rn6_v1_chr16_-_6404578_6404578	0.0513158	Hmga1	ENSRNOT00000051371|Cacna1d|ENSRNOG00000013147|calcium voltage-gated channel subunit alpha1 D [Source:RGD Symbol%3BAcc:70973]
rn6_v1_chrX_-_29648359_29648403	0.0509554	Hmga1	ENSRNOT00000086721|Gpm6b|ENSRNOG00000004613|glycoprotein m6b [Source:RGD Symbol%3BAcc:620580]	ENSRNOT00000006777|Gpm6b|ENSRNOG00000004613|glycoprotein m6b [Source:RGD Symbol%3BAcc:620580]
rn6_v1_chr16_-_3139177_3139177	0.0507857	Hmga1	ENSRNOT00000039311|Ccdc66|ENSRNOG00000028380|coiled-coil domain containing 66 [Source:RGD Symbol%3BAcc:1560873]
rn6_v1_chr4_+_99823252_99823252	0.0502251	Hmga1	ENSRNOT00000013587|Polr1a|ENSRNOG00000009545|RNA polymerase I subunit A [Source:RGD Symbol%3BAcc:620824]
rn6_v1_chr3_+_103753238_103753238	0.0494732	Hmga1	ENSRNOT00000007144|Slc12a6|ENSRNOG00000005196|solute carrier family 12%2C member 6 [Source:RGD Symbol%3BAcc:1311335]
rn6_v1_chr4_+_118655728_118655728	0.0478879	Hmga1	ENSRNOT00000043082|Aak1|ENSRNOG00000018317|AP2 associated kinase 1 [Source:RGD Symbol%3BAcc:1305520]
rn6_v1_chr1_+_57692836_57692983	0.0475473	Hmga1	ENSRNOT00000083968|Chd1|ENSRNOG00000014434|chromodomain helicase DNA binding protein 1 [Source:RGD Symbol%3BAcc:1306794]	ENSRNOT00000019358|Chd1|ENSRNOG00000014434|chromodomain helicase DNA binding protein 1 [Source:RGD Symbol%3BAcc:1306794]
rn6_v1_chr8_+_117308469_117308469	0.0472994	Hmga1	ENSRNOT00000080778|Qrich1|ENSRNOG00000025071|glutamine-rich 1 [Source:RGD Symbol%3BAcc:1311095]
rn6_v1_chr7_+_132378273_132378273	0.046975	Hmga1	ENSRNOT00000010990|LOC690142|ENSRNOG00000025898|hypothetical protein LOC690142 [Source:RGD Symbol%3BAcc:1584027]
rn6_v1_chr4_+_138269142_138269142	0.0462821	Hmga1	ENSRNOT00000007788|Cntn4|ENSRNOG00000005652|contactin 4 [Source:RGD Symbol%3BAcc:621361]
rn6_v1_chr14_+_7171613_7171613	0.0455828	Hmga1	ENSRNOT00000081600|Klhl8|ENSRNOG00000002214|kelch-like family member 8 [Source:RGD Symbol%3BAcc:1304685]
rn6_v1_chr3_-_133122691_133122691	0.0435906	Hmga1	ENSRNOT00000083637|Tasp1|ENSRNOG00000004493|taspase 1 [Source:RGD Symbol%3BAcc:1308591]
rn6_v1_chr6_+_134844676_134844676	0.0408492	Hmga1	ENSRNOT00000007595|Ppp2r5c|ENSRNOG00000004973|protein phosphatase 2%2C regulatory subunit B'%2C gamma [Source:RGD Symbol%3BAcc:1585097]
rn6_v1_chr4_-_99822879_99822992	0.0398672	Hmga1	ENSRNOT00000012622|Ptcd3|ENSRNOG00000009484|Pentatricopeptide repeat domain 3 [Source:RGD Symbol%3BAcc:1565582]	ENSRNOT00000078991|Ptcd3|ENSRNOG00000009484|Pentatricopeptide repeat domain 3 [Source:RGD Symbol%3BAcc:1565582]
rn6_v1_chr6_-_61405195_61405195	0.0398338	Hmga1	ENSRNOT00000008655|Lrrn3|ENSRNOG00000006368|leucine rich repeat neuronal 3 [Source:RGD Symbol%3BAcc:71066]
rn6_v1_chr8_-_90984224_90984224	0.0397157	Hmga1	ENSRNOT00000044931|Lca5|ENSRNOG00000009580|LCA5%2C lebercilin [Source:RGD Symbol%3BAcc:1308555]
rn6_v1_chr5_-_83648044_83648044	0.0378868	Hmga1	ENSRNOT00000046725|RGD1561195|ENSRNOG00000030383|similar to ribosomal protein L31 [Source:RGD Symbol%3BAcc:1561195]
rn6_v1_chr8_-_96266342_96266342	0.0370746	Hmga1	ENSRNOT00000078891|Syncrip|ENSRNOG00000000204|synaptotagmin binding%2C cytoplasmic RNA interacting protein [Source:RGD Symbol%3BAcc:1305683]
rn6_v1_chr1_+_257724842_257724842	0.035791	Hmga1	ENSRNOT00000075515|AABR07006774.1|ENSRNOG00000050417|
rn6_v1_chr9_-_65442257_65442257	0.0355084	Hmga1	ENSRNOT00000037660|Fam126b|ENSRNOG00000025079|family with sequence similarity 126%2C member B [Source:RGD Symbol%3BAcc:1309752]
rn6_v1_chr16_-_10603850_10603850	0.0350162	Hmga1	ENSRNOT00000087737|Fam35a|ENSRNOG00000059057|family with sequence similarity 35%2C member A [Source:RGD Symbol%3BAcc:1565067]
rn6_v1_chr4_-_50200328_50200328	0.0349463	Hmga1	ENSRNOT00000060530|Aass|ENSRNOG00000039494|aminoadipate-semialdehyde synthase [Source:RGD Symbol%3BAcc:1310811]
rn6_v1_chr14_+_48768537_48768537	0.0349091	Hmga1	ENSRNOT00000082599|Arap2|ENSRNOG00000056826|ArfGAP with RhoGAP domain%2C ankyrin repeat and PH domain 2 [Source:RGD Symbol%3BAcc:1306452]
rn6_v1_chr20_+_18833481_18833481	0.0348869	Hmga1	ENSRNOT00000080846|Bicc1|ENSRNOG00000000614|BicC family RNA binding protein 1 [Source:RGD Symbol%3BAcc:1307459]
rn6_v1_chr6_+_106496992_106497125	0.0345358	Hmga1	ENSRNOT00000086136|Rgs6|ENSRNOG00000008082|regulator of G-protein signaling 6 [Source:RGD Symbol%3BAcc:3569]	ENSRNOT00000058181|Rgs6|ENSRNOG00000008082|regulator of G-protein signaling 6 [Source:RGD Symbol%3BAcc:3569]
rn6_v1_chr11_+_20474483_20474483	0.0342927	Hmga1	ENSRNOT00000082417|Ncam2|ENSRNOG00000002126|neural cell adhesion molecule 2 [Source:RGD Symbol%3BAcc:1303131]	ENSRNOT00000002895|Ncam2|ENSRNOG00000002126|neural cell adhesion molecule 2 [Source:RGD Symbol%3BAcc:1303131]
rn6_v1_chr2_-_18531210_18531210	0.0342076	Hmga1	ENSRNOT00000088313|Vcan|ENSRNOG00000029212|versican [Source:RGD Symbol%3BAcc:619940]
rn6_v1_chr19_-_49510901_49510937	0.0341375	Hmga1	ENSRNOT00000082929|LOC687399|ENSRNOG00000045541|hypothetical protein LOC687399 [Source:RGD Symbol%3BAcc:1586501]	ENSRNOT00000079969|LOC687399|ENSRNOG00000045541|hypothetical protein LOC687399 [Source:RGD Symbol%3BAcc:1586501]
rn6_v1_chr14_+_21177237_21177237	0.0336367	Hmga1	ENSRNOT00000004866|Jchain|ENSRNOG00000003666|immunoglobulin joining chain [Source:MGI Symbol%3BAcc:MGI:96493]
rn6_v1_chr19_-_11669578_11669578	0.0332841	Hmga1	ENSRNOT00000026373|Gnao1|ENSRNOG00000019482|G protein subunit alpha o1 [Source:RGD Symbol%3BAcc:628732]
rn6_v1_chrX_+_84064427_84064427	0.0326711	Hmga1	ENSRNOT00000046364|Zfp711|ENSRNOG00000022391|zinc finger protein 711 [Source:RGD Symbol%3BAcc:1562768]
rn6_v1_chr7_-_142063212_142063212	0.032572	Hmga1	ENSRNOT00000089912|Slc11a2|ENSRNOG00000019550|solute carrier family 11 member 2 [Source:RGD Symbol%3BAcc:3684]
rn6_v1_chr14_+_108143869_108143869	0.0324409	Hmga1	ENSRNOT00000090003|Usp34|ENSRNOG00000051889|ubiquitin specific peptidase 34 [Source:RGD Symbol%3BAcc:1565181]
rn6_v1_chr16_-_7336335_7336335	0.0322738	Hmga1	ENSRNOT00000044991|Phf7|ENSRNOG00000018996|PHD finger protein 7 [Source:RGD Symbol%3BAcc:1308638]
rn6_v1_chr14_-_5006594_5006594	0.0315815	Hmga1	ENSRNOT00000076571|Zfp326|ENSRNOG00000047761|zinc finger protein 326 [Source:RGD Symbol%3BAcc:1592829]
rn6_v1_chr9_+_2202511_2202511	0.0306657	Hmga1	ENSRNOT00000017556|Satb1|ENSRNOG00000012942|SATB homeobox 1 [Source:RGD Symbol%3BAcc:1305561]
rn6_v1_chr3_+_98297554_98297554	0.0291652	Hmga1	ENSRNOT00000006524|Kcna4|ENSRNOG00000004918|potassium voltage-gated channel subfamily A member 4 [Source:RGD Symbol%3BAcc:2952]
rn6_v1_chr2_-_22096949_22096949	0.0288712	Hmga1	ENSRNOT00000089325|Zfyve16|ENSRNOG00000013055|zinc finger FYVE-type containing 16 [Source:RGD Symbol%3BAcc:1564784]
rn6_v1_chr17_-_15429051_15429051	0.0283709	Hmga1	ENSRNOT00000074667|Nol8|ENSRNOG00000045569|nucleolar protein 8 [Source:RGD Symbol%3BAcc:1309551]
rn6_v1_chr14_+_48726045_48726045	0.027767	Hmga1	ENSRNOT00000086646|Arap2|ENSRNOG00000056826|ArfGAP with RhoGAP domain%2C ankyrin repeat and PH domain 2 [Source:RGD Symbol%3BAcc:1306452]
rn6_v1_chr14_-_102293677_102293677	0.026201	Hmga1	ENSRNOT00000008135|Etaa1|ENSRNOG00000006185|Ewing tumor-associated antigen 1 [Source:RGD Symbol%3BAcc:1587340]
rn6_v1_chr2_+_185591959_185591959	0.0259023	Hmga1	ENSRNOT00000057084|Lrba|ENSRNOG00000023453|LPS responsive beige-like anchor protein [Source:RGD Symbol%3BAcc:1311428]
rn6_v1_chrX_+_71342775_71342775	0.024609	Hmga1	ENSRNOT00000004888|Itgb1bp2|ENSRNOG00000003596|integrin subunit beta 1 binding protein 2 [Source:RGD Symbol%3BAcc:1565015]
rn6_v1_chr3_-_150960030_150960030	0.0242629	Hmga1	ENSRNOT00000024714|Ncoa6|ENSRNOG00000018288|nuclear receptor coactivator 6 [Source:RGD Symbol%3BAcc:620111]
rn6_v1_chr12_-_37411525_37411525	0.0240426	Hmga1	ENSRNOT00000087698|Tctn2|ENSRNOG00000052704|tectonic family member 2 [Source:RGD Symbol%3BAcc:1591895]
rn6_v1_chr9_-_66019065_66019065	0.0239982	Hmga1	ENSRNOT00000088729|Als2|ENSRNOG00000023280|ALS2%2C alsin Rho guanine nucleotide exchange factor [Source:RGD Symbol%3BAcc:1310372]
rn6_v1_chr3_+_154910626_154910626	0.0236483	Hmga1	ENSRNOT00000079515|Ralgapb|ENSRNOG00000014836|Ral GTPase activating protein non-catalytic beta subunit [Source:RGD Symbol%3BAcc:1306861]
rn6_v1_chr16_-_19583386_19583386	0.0223244	Hmga1	ENSRNOT00000090131|Zfp617|ENSRNOG00000060701|zinc finger protein 617 [Source:MGI Symbol%3BAcc:MGI:2684459]
rn6_v1_chr1_-_155955173_155955173	0.0221437	Hmga1	ENSRNOT00000079345|AABR07004776.1|ENSRNOG00000051568|
rn6_v1_chr16_-_6405117_6405117	0.0218791	Hmga1	ENSRNOT00000047737|Cacna1d|ENSRNOG00000013147|calcium voltage-gated channel subunit alpha1 D [Source:RGD Symbol%3BAcc:70973]
rn6_v1_chr18_+_30574627_30574627	0.0214164	Hmga1	ENSRNOT00000060484|Pcdhb19|ENSRNOG00000039469|protocadherin beta 19 [Source:RGD Symbol%3BAcc:1549697]
rn6_v1_chr11_-_4332255_4332255	0.021107	Hmga1	ENSRNOT00000087133|Cadm2|ENSRNOG00000030840|cell adhesion molecule 2 [Source:RGD Symbol%3BAcc:1305678]
rn6_v1_chrX_+_20423401_20423401	0.0199782	Hmga1	ENSRNOT00000093162|Wnk3|ENSRNOG00000002537|WNK lysine deficient protein kinase 3 [Source:RGD Symbol%3BAcc:1563131]
rn6_v1_chr2_+_237755673_237755673	0.0199076	Hmga1	ENSRNOT00000083937|Tbck|ENSRNOG00000011454|TBC1 domain containing kinase [Source:RGD Symbol%3BAcc:1307816]
rn6_v1_chr7_+_140758615_140758615	0.0189254	Hmga1	ENSRNOT00000089448|Troap|ENSRNOG00000060703|trophinin associated protein [Source:RGD Symbol%3BAcc:1306870]
rn6_v1_chr7_+_37101391_37101391	0.0189089	Hmga1	ENSRNOT00000029764|Eea1|ENSRNOG00000021681|early endosome antigen 1 [Source:RGD Symbol%3BAcc:1310167]
rn6_v1_chr1_-_90149991_90149991	0.0188636	Hmga1	ENSRNOT00000076987|RGD1308428|ENSRNOG00000021129|similar to RIKEN cDNA 4931406P16 [Source:RGD Symbol%3BAcc:1308428]
rn6_v1_chr14_+_34455934_34455934	0.0187193	Hmga1	ENSRNOT00000085991|Clock|ENSRNOG00000002175|clock circadian regulator [Source:RGD Symbol%3BAcc:620271]	ENSRNOT00000002981|Clock|ENSRNOG00000002175|clock circadian regulator [Source:RGD Symbol%3BAcc:620271]
rn6_v1_chr17_+_44766313_44766313	0.0186302	Hmga1	ENSRNOT00000091688|Hist1h1b|ENSRNOG00000060355|histone cluster 1 H1 family member b [Source:RGD Symbol%3BAcc:1590638]
rn6_v1_chr4_+_102426224_102426224	0.0182697	Hmga1	ENSRNOT00000073768|LOC103694107|ENSRNOG00000048888|NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 pseudogene [Source:RGD Symbol%3BAcc:9300452]
rn6_v1_chr3_+_172385672_172385672	0.0178472	Hmga1	ENSRNOT00000090989|Gnas|ENSRNOG00000047374|GNAS complex locus [Source:RGD Symbol%3BAcc:2716]
rn6_v1_chr13_-_55173692_55173692	0.0159795	Hmga1	ENSRNOT00000064785|Ptprc|ENSRNOG00000000655|protein tyrosine phosphatase%2C receptor type%2C C [Source:RGD Symbol%3BAcc:3451]	ENSRNOT00000029878|Ptprc|ENSRNOG00000000655|protein tyrosine phosphatase%2C receptor type%2C C [Source:RGD Symbol%3BAcc:3451]	ENSRNOT00000029865|Ptprc|ENSRNOG00000000655|protein tyrosine phosphatase%2C receptor type%2C C [Source:RGD Symbol%3BAcc:3451]	ENSRNOT00000060292|Ptprc|ENSRNOG00000000655|protein tyrosine phosphatase%2C receptor type%2C C [Source:RGD Symbol%3BAcc:3451]	ENSRNOT00000000814|Ptprc|ENSRNOG00000000655|protein tyrosine phosphatase%2C receptor type%2C C [Source:RGD Symbol%3BAcc:3451]
rn6_v1_chr13_+_57243877_57243877	0.0156428	Hmga1	ENSRNOT00000083693|Kcnt2|ENSRNOG00000013312|potassium sodium-activated channel subfamily T member 2 [Source:RGD Symbol%3BAcc:735074]
rn6_v1_chr8_-_53899669_53899669	0.0154258	Hmga1	ENSRNOT00000082257|Ncam1|ENSRNOG00000031890|neural cell adhesion molecule 1 [Source:RGD Symbol%3BAcc:67378]
rn6_v1_chr16_-_2227258_2227309	0.0152015	Hmga1	ENSRNOT00000089377|Slmap|ENSRNOG00000011307|sarcolemma associated protein [Source:RGD Symbol%3BAcc:1307674]	ENSRNOT00000067464|Slmap|ENSRNOG00000011307|sarcolemma associated protein [Source:RGD Symbol%3BAcc:1307674]
rn6_v1_chr2_+_235264219_235264219	0.0150219	Hmga1	ENSRNOT00000086245|Cfi|ENSRNOG00000053400|complement factor I [Source:RGD Symbol%3BAcc:620429]
rn6_v1_chr10_+_97771264_97771264	0.014436	Hmga1	ENSRNOT00000005257|Arsg|ENSRNOG00000003931|arylsulfatase G [Source:RGD Symbol%3BAcc:1306571]
rn6_v1_chr1_-_255976425_255976425	0.0132876	Hmga1	ENSRNOT00000085303|Ide|ENSRNOG00000016833|insulin degrading enzyme [Source:RGD Symbol%3BAcc:2861]
rn6_v1_chr2_-_184263564_184263564	0.0122304	Hmga1	ENSRNOT00000015279|Fbxw7|ENSRNOG00000010889|F-box and WD repeat domain containing 7 [Source:RGD Symbol%3BAcc:2321145]
rn6_v1_chr6_+_95323579_95323579	0.0116709	Hmga1	ENSRNOT00000007369|Pcnx4|ENSRNOG00000005568|pecanex homolog 4 (Drosophila) [Source:RGD Symbol%3BAcc:1582892]
rn6_v1_chr8_-_126390801_126390801	0.0112452	Hmga1	ENSRNOT00000089732|AABR07071661.1|ENSRNOG00000053820|
rn6_v1_chr2_-_258932200_258932200	0.00905616	Hmga1	ENSRNOT00000045905|Adgrl2|ENSRNOG00000032660|adhesion G protein-coupled receptor L2 [Source:RGD Symbol%3BAcc:620835]
rn6_v1_chr15_-_42517553_42517556	0.00842714	Hmga1	ENSRNOT00000081500|Esco2|ENSRNOG00000015921|establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:RGD Symbol%3BAcc:1593313]	ENSRNOT00000021320|Esco2|ENSRNOG00000015921|establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:RGD Symbol%3BAcc:1593313]
rn6_v1_chr5_+_36566783_36566783	0.00802798	Hmga1	ENSRNOT00000077650|Fbxl4|ENSRNOG00000005641|F-box and leucine-rich repeat protein 4 [Source:RGD Symbol%3BAcc:1305724]
rn6_v1_chr11_-_61698595_61698595	0.00761057	Hmga1	ENSRNOT00000093445|Ccdc191|ENSRNOG00000057815|coiled-coil domain containing 191 [Source:RGD Symbol%3BAcc:1566314]
rn6_v1_chrX_-_142248369_142248369	0.00723815	Hmga1	ENSRNOT00000091330|Fgf13|ENSRNOG00000042753|fibroblast growth factor 13 [Source:RGD Symbol%3BAcc:620164]
rn6_v1_chr5_-_50138475_50138475	0.00696346	Hmga1	ENSRNOT00000011969|Slc35a1|ENSRNOG00000008908|solute carrier family 35 member A1 [Source:RGD Symbol%3BAcc:1311359]
rn6_v1_chr3_-_147188929_147188929	0.00693991	Hmga1	ENSRNOT00000055455|Rad21l1|ENSRNOG00000022335|RAD21 cohesin complex component like 1 [Source:RGD Symbol%3BAcc:1587557]
rn6_v1_chr11_+_7265828_7265828	0.00665422	Hmga1	ENSRNOT00000084765|Gbe1|ENSRNOG00000051232|1%2C4-alpha-glucan branching enzyme 1 [Source:RGD Symbol%3BAcc:1309968]
rn6_v1_chr6_-_137733026_137733026	0.00639607	Hmga1	ENSRNOT00000019213|Jag2|ENSRNOG00000013927|jagged 2 [Source:RGD Symbol%3BAcc:2938]
rn6_v1_chr8_+_107508351_107508351	0.00639249	Hmga1	ENSRNOT00000081594|Cep70|ENSRNOG00000022845|centrosomal protein 70 [Source:RGD Symbol%3BAcc:1561486]
rn6_v1_chr9_-_44419998_44419998	0.00634158	Hmga1	ENSRNOT00000091397|Tsga10|ENSRNOG00000058681|testis specific 10 [Source:RGD Symbol%3BAcc:621142]	ENSRNOT00000083747|Tsga10|ENSRNOG00000058681|testis specific 10 [Source:RGD Symbol%3BAcc:621142]
rn6_v1_chr3_-_48535909_48535909	0.00531305	Hmga1	ENSRNOT00000008148|Fap|ENSRNOG00000005679|fibroblast activation protein%2C alpha [Source:RGD Symbol%3BAcc:621253]
rn6_v1_chr5_+_3675833_3675833	0.00477804	Hmga1	ENSRNOT00000011083|RGD1564405|ENSRNOG00000008382|similar to mKIAA1321 protein [Source:RGD Symbol%3BAcc:1564405]
rn6_v1_chr1_+_13261876_13261876	0.0046475	Hmga1	ENSRNOT00000090703|Reps1|ENSRNOG00000059224|RALBP1 associated Eps domain containing 1 [Source:RGD Symbol%3BAcc:1307131]
rn6_v1_chr1_-_183729569_183729569	0.00337992	Hmga1	ENSRNOT00000083293|Copb1|ENSRNOG00000057623|coatomer protein complex%2C subunit beta 1 [Source:RGD Symbol%3BAcc:620861]
rn6_v1_chr14_+_70780623_70780720	0.00269107	Hmga1	ENSRNOT00000083871|Ldb2|ENSRNOG00000003205|LIM domain binding 2 [Source:RGD Symbol%3BAcc:1307921]	ENSRNOT00000058803|Ldb2|ENSRNOG00000003205|LIM domain binding 2 [Source:RGD Symbol%3BAcc:1307921]
rn6_v1_chr9_-_115382445_115382445	0.00178989	Hmga1	ENSRNOT00000091316|Ptprm|ENSRNOG00000011700|protein tyrosine phosphatase%2C receptor type%2C M [Source:RGD Symbol%3BAcc:620776]
rn6_v1_chrX_+_78042859_78042859	0.00172264	Hmga1	ENSRNOT00000003286|Lpar4|ENSRNOG00000002428|lysophosphatidic acid receptor 4 [Source:RGD Symbol%3BAcc:1563686]
rn6_v1_chr14_-_33543238_33543238	0.00086823	Hmga1	ENSRNOT00000066382|Srp72|ENSRNOG00000002100|signal recognition particle 72 [Source:RGD Symbol%3BAcc:1564787]
rn6_v1_chrX_-_95062132_95062132	0.000827654	Hmga1	ENSRNOT00000049956|Nap1l3|ENSRNOG00000029087|nucleosome assembly protein 1-like 3 [Source:RGD Symbol%3BAcc:620990]
rn6_v1_chr6_+_122751016_122751016	0.000462408	Hmga1	ENSRNOT00000078050|Zc3h14|ENSRNOG00000004083|zinc finger CCCH type containing 14 [Source:RGD Symbol%3BAcc:621850]
rn6_v1_chr3_-_104018861_104018861	7.38575e-05	Hmga1	ENSRNOT00000008387|Chrm5|ENSRNOG00000006397|cholinergic receptor%2C muscarinic 5 [Source:RGD Symbol%3BAcc:620027]
