rn6_v1_chr1_+_229003961_229003961	0.312154	Hoxa2	ENSRNOT00000016152|Fam111a|ENSRNOG00000012067|family with sequence similarity 111%2C member A [Source:RGD Symbol%3BAcc:1560913]
rn6_v1_chr2_-_34452895_34452895	0.271785	Hoxa2	ENSRNOT00000079385|AABR07007905.2|ENSRNOG00000053229|
rn6_v1_chr16_+_3293599_3293657	0.268128	Hoxa2	ENSRNOT00000081999|Erc2|ENSRNOG00000015148|ELKS/RAB6-interacting/CAST family member 2 [Source:RGD Symbol%3BAcc:708372]	ENSRNOT00000047118|Erc2|ENSRNOG00000015148|ELKS/RAB6-interacting/CAST family member 2 [Source:RGD Symbol%3BAcc:708372]	ENSRNOT00000020427|Erc2|ENSRNOG00000015148|ELKS/RAB6-interacting/CAST family member 2 [Source:RGD Symbol%3BAcc:708372]
rn6_v1_chr7_+_125288081_125288081	0.247433	Hoxa2	ENSRNOT00000085216|Parvg|ENSRNOG00000052064|parvin%2C gamma [Source:RGD Symbol%3BAcc:1597417]
rn6_v1_chr4_+_22859622_22859622	0.245709	Hoxa2	ENSRNOT00000073501|Adam22|ENSRNOG00000042478|ADAM metallopeptidase domain 22 [Source:RGD Symbol%3BAcc:1585016]	ENSRNOT00000068410|Adam22|ENSRNOG00000042478|ADAM metallopeptidase domain 22 [Source:RGD Symbol%3BAcc:1585016]
rn6_v1_chr8_-_104155775_104155775	0.231832	Hoxa2	ENSRNOT00000042885|LOC102550734|ENSRNOG00000030296|60S ribosomal protein L31-like [Source:RGD Symbol%3BAcc:7748306]
rn6_v1_chr7_+_20262680_20262680	0.221272	Hoxa2	ENSRNOT00000046378|LOC300308|ENSRNOG00000048230|similar to hypothetical protein 4930509O22 [Source:RGD Symbol%3BAcc:1359716]
rn6_v1_chr1_+_169145445_169145445	0.210904	Hoxa2	ENSRNOT00000034019|LOC499219|ENSRNOG00000024789|hypothetical protein LOC499219 [Source:RGD Symbol%3BAcc:1565298]
rn6_v1_chr18_-_75207306_75207306	0.198488	Hoxa2	ENSRNOT00000021717|Setbp1|ENSRNOG00000016208|SET binding protein 1 [Source:RGD Symbol%3BAcc:1306229]
rn6_v1_chr19_-_39267928_39267928	0.185495	Hoxa2	ENSRNOT00000027686|Tmed6|ENSRNOG00000020406|transmembrane p24 trafficking protein 6 [Source:RGD Symbol%3BAcc:1305260]
rn6_v1_chr8_-_55696601_55696601	0.170987	Hoxa2	ENSRNOT00000016127|RGD1562914|ENSRNOG00000012022|RGD1562914 [Source:RGD Symbol%3BAcc:1562914]
rn6_v1_chr1_-_65681440_65681440	0.161066	Hoxa2	ENSRNOT00000026305|Zfp128|ENSRNOG00000031113|zinc finger protein 128 [Source:RGD Symbol%3BAcc:7606541]
rn6_v1_chr2_+_52152536_52152536	0.147432	Hoxa2	ENSRNOT00000072691|AABR07008293.2|ENSRNOG00000048493|
rn6_v1_chr6_-_87427153_87427153	0.143371	Hoxa2	ENSRNOT00000071999|AABR07064622.1|ENSRNOG00000047877|
rn6_v1_chr9_+_50892605_50892605	0.138652	Hoxa2	ENSRNOT00000033133|Bivm|ENSRNOG00000022894|basic%2C immunoglobulin-like variable motif containing [Source:RGD Symbol%3BAcc:1311888]
rn6_v1_chr15_+_36809361_36809361	0.137743	Hoxa2	ENSRNOT00000076667|Parp4|ENSRNOG00000051196|poly (ADP-ribose) polymerase family%2C member 4 [Source:RGD Symbol%3BAcc:1310524]
rn6_v1_chr3_-_158328881_158328881	0.134406	Hoxa2	ENSRNOT00000044466|Ptprt|ENSRNOG00000032656|protein tyrosine phosphatase%2C receptor type%2C T [Source:RGD Symbol%3BAcc:1309653]
rn6_v1_chr11_+_60102121_60102121	0.133331	Hoxa2	ENSRNOT00000045521|Tmprss7|ENSRNOG00000002145|transmembrane protease%2C serine 7 [Source:RGD Symbol%3BAcc:1304655]
rn6_v1_chr8_+_52729003_52729003	0.131707	Hoxa2	ENSRNOT00000081738|Nxpe4|ENSRNOG00000059851|neurexophilin and PC-esterase domain family%2C member 4 [Source:MGI Symbol%3BAcc:MGI:1924792]
rn6_v1_chr17_+_23661429_23661429	0.124407	Hoxa2	ENSRNOT00000046523|Phactr1|ENSRNOG00000014264|phosphatase and actin regulator 1 [Source:RGD Symbol%3BAcc:1303187]
rn6_v1_chr17_+_69634890_69634890	0.119897	Hoxa2	ENSRNOT00000029049|Akr1c13|ENSRNOG00000050040|aldo-keto reductase family 1%2C member C13 [Source:RGD Symbol%3BAcc:1308232]
rn6_v1_chr6_+_112203679_112203679	0.118544	Hoxa2	ENSRNOT00000031205|Nrxn3|ENSRNOG00000047574|neurexin 3 [Source:RGD Symbol%3BAcc:620212]
rn6_v1_chr2_+_251002213_251002213	0.1178	Hoxa2	ENSRNOT00000080600|Odf2l|ENSRNOG00000014059|outer dense fiber of sperm tails 2-like [Source:RGD Symbol%3BAcc:1593831]
rn6_v1_chr9_+_73378057_73378111	0.115066	Hoxa2	ENSRNOT00000043627|Map2|ENSRNOG00000011841|microtubule-associated protein 2 [Source:RGD Symbol%3BAcc:3044]	ENSRNOT00000045766|Map2|ENSRNOG00000011841|microtubule-associated protein 2 [Source:RGD Symbol%3BAcc:3044]	ENSRNOT00000092445|Map2|ENSRNOG00000011841|microtubule-associated protein 2 [Source:RGD Symbol%3BAcc:3044]	ENSRNOT00000037974|Map2|ENSRNOG00000011841|microtubule-associated protein 2 [Source:RGD Symbol%3BAcc:3044]
rn6_v1_chr1_-_155955173_155955173	0.114998	Hoxa2	ENSRNOT00000079345|AABR07004776.1|ENSRNOG00000051568|
rn6_v1_chr3_-_109044420_109044420	0.112577	Hoxa2	ENSRNOT00000007687|Rasgrp1|ENSRNOG00000005404|RAS guanyl releasing protein 1 [Source:RGD Symbol%3BAcc:3539]
rn6_v1_chr8_+_53678994_53678994	0.112495	Hoxa2	ENSRNOT00000083419|Drd2|ENSRNOG00000008428|dopamine receptor D2 [Source:RGD Symbol%3BAcc:2520]
rn6_v1_chrM_+_9870_9870	0.111909	Hoxa2	ENSRNOT00000044582|Mt-nd4l|ENSRNOG00000031053|mitochondrially encoded NADH 4L dehydrogenase [Source:RGD Symbol%3BAcc:620494]
rn6_v1_chr17_+_88215834_88215834	0.108624	Hoxa2	ENSRNOT00000034098|Gpr158|ENSRNOG00000024832|G protein-coupled receptor 158 [Source:RGD Symbol%3BAcc:1305841]
rn6_v1_chr2_+_235596907_235596907	0.10619	Hoxa2	ENSRNOT00000071463|Col25a1|ENSRNOG00000050706|collagen type XXV alpha 1 chain [Source:RGD Symbol%3BAcc:1590105]	ENSRNOT00000075728|Col25a1|ENSRNOG00000050706|collagen type XXV alpha 1 chain [Source:RGD Symbol%3BAcc:1590105]
rn6_v1_chr13_-_61591139_61591139	0.105331	Hoxa2	ENSRNOT00000005324|Rgs18|ENSRNOG00000003959|regulator of G-protein signaling 18 [Source:RGD Symbol%3BAcc:1306522]
rn6_v1_chr1_-_67094567_67094567	0.10513	Hoxa2	ENSRNOT00000073583|AABR07071871.1|ENSRNOG00000047429|
rn6_v1_chr4_-_117589464_117589464	0.103762	Hoxa2	ENSRNOT00000021167|Nat8f1|ENSRNOG00000015799|N-acetyltransferase 8 (GCN5-related) family member 1 [Source:RGD Symbol%3BAcc:621606]
rn6_v1_chr3_+_14299479_14299479	0.103761	Hoxa2	ENSRNOT00000092745|Cntrl|ENSRNOG00000022015|centriolin [Source:RGD Symbol%3BAcc:1305317]
rn6_v1_chr8_-_94920441_94920441	0.102925	Hoxa2	ENSRNOT00000014165|Cep162|ENSRNOG00000010608|centrosomal protein 162 [Source:RGD Symbol%3BAcc:1307365]
rn6_v1_chr3_+_122816924_122816924	0.102431	Hoxa2	ENSRNOT00000045604|RGD1561317|ENSRNOG00000031034|similar to ribosomal protein L31 [Source:RGD Symbol%3BAcc:1561317]
rn6_v1_chr12_-_37682964_37682964	0.10186	Hoxa2	ENSRNOT00000001421|RGD1563482|ENSRNOG00000001073|similar to hypothetical protein FLJ38663 [Source:RGD Symbol%3BAcc:1563482]
rn6_v1_chr3_+_63379031_63379031	0.101251	Hoxa2	ENSRNOT00000068199|Osbpl6|ENSRNOG00000010812|oxysterol binding protein-like 6 [Source:RGD Symbol%3BAcc:1308887]
rn6_v1_chr1_-_62316450_62316450	0.100596	Hoxa2	ENSRNOT00000079171|AABR07001926.3|ENSRNOG00000061533|
rn6_v1_chr5_+_106952082_106952082	0.100562	Hoxa2	ENSRNOT00000046931|RGD1561246|ENSRNOG00000061730|similar to put. precursor MuIFN-alpha 5 [Source:RGD Symbol%3BAcc:1561246]
rn6_v1_chr1_+_228684136_228684136	0.0990094	Hoxa2	ENSRNOT00000028608|Olr337|ENSRNOG00000021074|olfactory receptor 337 [Source:RGD Symbol%3BAcc:1333015]
rn6_v1_chr7_+_144503534_144503534	0.0982533	Hoxa2	ENSRNOT00000021543|Tbca|ENSRNOG00000016100|tubulin folding cofactor A [Source:RGD Symbol%3BAcc:1311538]
rn6_v1_chr8_-_69466618_69466618	0.0959252	Hoxa2	ENSRNOT00000042925|Ids|ENSRNOG00000001465|iduronate 2-sulfatase [Source:MGI Symbol%3BAcc:MGI:96417]
rn6_v1_chr2_+_243425007_243425007	0.0948437	Hoxa2	ENSRNOT00000082894|Trmt10a|ENSRNOG00000011025|tRNA methyltransferase 10A [Source:RGD Symbol%3BAcc:1594565]
rn6_v1_chr1_-_219388009_219388009	0.0936668	Hoxa2	ENSRNOT00000001550|Cabp4|ENSRNOG00000022044|calcium binding protein 4 [Source:RGD Symbol%3BAcc:1306083]
rn6_v1_chrX_+_70256737_70256737	0.0922384	Hoxa2	ENSRNOT00000029298|Otud6a|ENSRNOG00000042687|OTU deubiquitinase 6A [Source:RGD Symbol%3BAcc:1560855]
rn6_v1_chr15_-_58171049_58171049	0.0908143	Hoxa2	ENSRNOT00000001371|Gpalpp1|ENSRNOG00000001037|GPALPP motifs containing 1 [Source:RGD Symbol%3BAcc:1307254]
rn6_v1_chr2_+_210045161_210045161	0.088826	Hoxa2	ENSRNOT00000024455|Slc16a4|ENSRNOG00000018131|solute carrier family 16%2C member 4 [Source:RGD Symbol%3BAcc:1359655]
rn6_v1_chr11_-_60882379_60882379	0.0888132	Hoxa2	ENSRNOT00000002799|Cd200r1|ENSRNOG00000039048|CD200 receptor 1 [Source:RGD Symbol%3BAcc:61837]
rn6_v1_chr20_+_20236151_20236151	0.08808	Hoxa2	ENSRNOT00000079630|Ank3|ENSRNOG00000053288|ankyrin 3 [Source:RGD Symbol%3BAcc:620157]
rn6_v1_chr1_+_69615603_69615603	0.0879691	Hoxa2	ENSRNOT00000084806|Zfp418|ENSRNOG00000015271|zinc finger protein 418 [Source:RGD Symbol%3BAcc:1311663]
rn6_v1_chr6_+_145546595_145546595	0.0848135	Hoxa2	ENSRNOT00000007112|Rapgef5|ENSRNOG00000005271|Rap guanine nucleotide exchange factor 5 [Source:RGD Symbol%3BAcc:1561668]
rn6_v1_chr14_+_113867209_113867209	0.0839632	Hoxa2	ENSRNOT00000067591|Ccdc88a|ENSRNOG00000004057|coiled coil domain containing 88A [Source:RGD Symbol%3BAcc:1306694]
rn6_v1_chr13_+_80464348_80464348	0.0831989	Hoxa2	ENSRNOT00000076324|Vamp4|ENSRNOG00000003071|vesicle-associated membrane protein 4 [Source:RGD Symbol%3BAcc:1309753]
rn6_v1_chr3_-_57192125_57192125	0.0827438	Hoxa2	ENSRNOT00000032528|RGD1565767|ENSRNOG00000023181|similar to ribosomal protein L15 [Source:RGD Symbol%3BAcc:1565767]
rn6_v1_chr8_-_21492801_21492801	0.0820309	Hoxa2	ENSRNOT00000077465|Zfp426|ENSRNOG00000033624|zinc finger protein 426 [Source:RGD Symbol%3BAcc:1590942]
rn6_v1_chr3_-_151625644_151625644	0.0808137	Hoxa2	ENSRNOT00000026657|Rbm12|ENSRNOG00000050864|RNA binding motif protein 12 [Source:RGD Symbol%3BAcc:1594333]
rn6_v1_chr8_+_53678777_53678777	0.0802733	Hoxa2	ENSRNOT00000045944|Drd2|ENSRNOG00000008428|dopamine receptor D2 [Source:RGD Symbol%3BAcc:2520]
rn6_v1_chr8_-_96547568_96547568	0.0797491	Hoxa2	ENSRNOT00000078343|RGD1560775|ENSRNOG00000042726|similar to RIKEN cDNA 4930579C12 gene [Source:RGD Symbol%3BAcc:1560775]
rn6_v1_chr3_-_146470293_146470293	0.0790486	Hoxa2	ENSRNOT00000009627|Acss1|ENSRNOG00000007102|acyl-CoA synthetase short-chain family member 1 [Source:RGD Symbol%3BAcc:1306246]
rn6_v1_chr2_-_219262901_219262901	0.0777984	Hoxa2	ENSRNOT00000037068|Gpr88|ENSRNOG00000026953|G-protein coupled receptor 88 [Source:RGD Symbol%3BAcc:61921]
rn6_v1_chr3_-_431933_431933	0.0768069	Hoxa2	ENSRNOT00000033653|Spopl|ENSRNOG00000005070|speckle type BTB/POZ protein like [Source:RGD Symbol%3BAcc:1305847]
rn6_v1_chr9_-_52238564_52238564	0.0767802	Hoxa2	ENSRNOT00000005073|Col5a2|ENSRNOG00000003736|collagen type V alpha 2 chain [Source:RGD Symbol%3BAcc:70921]
rn6_v1_chr8_+_82038967_82038967	0.0743514	Hoxa2	ENSRNOT00000079535|Myo5a|ENSRNOG00000058866|myosin VA [Source:RGD Symbol%3BAcc:3143]
rn6_v1_chr5_-_149987910_149987910	0.0740476	Hoxa2	ENSRNOT00000091637|Ptpru|ENSRNOG00000013515|protein tyrosine phosphatase%2C receptor type%2C U [Source:RGD Symbol%3BAcc:620782]
rn6_v1_chr18_+_15467870_15467870	0.0736644	Hoxa2	ENSRNOT00000091696|B4galt6|ENSRNOG00000015895|beta-1%2C4-galactosyltransferase 6 [Source:RGD Symbol%3BAcc:71046]
rn6_v1_chr9_+_61738471_61738471	0.0733983	Hoxa2	ENSRNOT00000090305|AABR07067762.1|ENSRNOG00000055383|
rn6_v1_chr7_+_112057030_112057030	0.0728608	Hoxa2	ENSRNOT00000035216|AABR07058366.1|ENSRNOG00000025046|
rn6_v1_chr1_-_260992291_260992366	0.0725619	Hoxa2	ENSRNOT00000035415|Slit1|ENSRNOG00000026065|slit guidance ligand 1 [Source:RGD Symbol%3BAcc:69307]	ENSRNOT00000034758|Slit1|ENSRNOG00000026065|slit guidance ligand 1 [Source:RGD Symbol%3BAcc:69307]
rn6_v1_chr18_-_63357194_63357298	0.0723633	Hoxa2	ENSRNOT00000089408|Spire1|ENSRNOG00000025324|spire-type actin nucleation factor 1 [Source:RGD Symbol%3BAcc:1305892]	ENSRNOT00000066103|Spire1|ENSRNOG00000025324|spire-type actin nucleation factor 1 [Source:RGD Symbol%3BAcc:1305892]
rn6_v1_chr9_+_81880177_81880177	0.0722575	Hoxa2	ENSRNOT00000022839|Stk36|ENSRNOG00000016913|serine/threonine kinase 36 [Source:RGD Symbol%3BAcc:1307318]
rn6_v1_chr11_-_31238026_31238026	0.0706166	Hoxa2	ENSRNOT00000032366|RGD1562726|ENSRNOG00000028670|similar to Putative protein C21orf62 homolog [Source:RGD Symbol%3BAcc:1562726]
rn6_v1_chr8_-_13835168_13835168	0.0704745	Hoxa2	ENSRNOT00000014435|Med17|ENSRNOG00000010496|mediator complex subunit 17 [Source:RGD Symbol%3BAcc:1311120]
rn6_v1_chrX_+_71199491_71199532	0.0698928	Hoxa2	ENSRNOT00000076168|Nlgn3|ENSRNOG00000003812|neuroligin 3 [Source:RGD Symbol%3BAcc:621119]	ENSRNOT00000005077|Nlgn3|ENSRNOG00000003812|neuroligin 3 [Source:RGD Symbol%3BAcc:621119]	ENSRNOT00000005102|Nlgn3|ENSRNOG00000003812|neuroligin 3 [Source:RGD Symbol%3BAcc:621119]
rn6_v1_chr3_+_79823945_79823945	0.0693917	Hoxa2	ENSRNOT00000014484|Celf1|ENSRNOG00000010379|CUGBP%2C Elav-like family member 1 [Source:RGD Symbol%3BAcc:1307721]
rn6_v1_chr4_-_165456677_165456677	0.0685282	Hoxa2	ENSRNOT00000082207|Klra2|ENSRNOG00000031515|killer cell lectin-like receptor%2C subfamily A%2C member 2 [Source:RGD Symbol%3BAcc:1359667]
rn6_v1_chr19_-_15540773_15540773	0.0680728	Hoxa2	ENSRNOT00000022359|Lpcat2|ENSRNOG00000016643|lysophosphatidylcholine acyltransferase 2 [Source:RGD Symbol%3BAcc:2325051]
rn6_v1_chr16_+_11599753_11599753	0.0677701	Hoxa2	ENSRNOT00000079833|Grid1|ENSRNOG00000055499|glutamate ionotropic receptor delta type subunit 1 [Source:RGD Symbol%3BAcc:68366]
rn6_v1_chr3_+_8958090_8958133	0.0669759	Hoxa2	ENSRNOT00000086789|Dolpp1|ENSRNOG00000017663|dolichyldiphosphatase 1 [Source:RGD Symbol%3BAcc:1307447]	ENSRNOT00000064557|Dolpp1|ENSRNOG00000017663|dolichyldiphosphatase 1 [Source:RGD Symbol%3BAcc:1307447]
rn6_v1_chr4_-_164123974_164123974	0.0669006	Hoxa2	ENSRNOT00000082447|LOC502907|ENSRNOG00000053661|similar to immunoreceptor Ly49si1 [Source:RGD Symbol%3BAcc:1584856]
rn6_v1_chr13_+_51384562_51384562	0.066752	Hoxa2	ENSRNOT00000077928|Kdm5b|ENSRNOG00000060544|lysine demethylase 5B [Source:RGD Symbol%3BAcc:1565602]
rn6_v1_chr16_-_20097287_20097287	0.0667493	Hoxa2	ENSRNOT00000025162|Unc13a|ENSRNOG00000018452|unc-13 homolog A [Source:RGD Symbol%3BAcc:619722]
rn6_v1_chr9_+_18001105_18001105	0.0667128	Hoxa2	ENSRNOT00000071814|AABR07066826.2|ENSRNOG00000049311|
rn6_v1_chr6_-_133716847_133716847	0.0664133	Hoxa2	ENSRNOT00000072399|Rtl1|ENSRNOG00000048751|retrotransposon-like 1 [Source:MGI Symbol%3BAcc:MGI:2656842]
rn6_v1_chr5_+_27312928_27312928	0.0660732	Hoxa2	ENSRNOT00000078102|Runx1t1|ENSRNOG00000005673|RUNX1 translocation partner 1 [Source:RGD Symbol%3BAcc:1305490]
rn6_v1_chr1_+_255801694_255801694	0.0660308	Hoxa2	ENSRNOT00000018878|AC103056.1|ENSRNOG00000014105|
rn6_v1_chr7_-_125465848_125465848	0.0660121	Hoxa2	ENSRNOT00000039588|Ldoc1l|ENSRNOG00000021671|leucine zipper%2C down-regulated in cancer 1-like [Source:RGD Symbol%3BAcc:1306472]
rn6_v1_chr1_-_101664436_101664436	0.065977	Hoxa2	ENSRNOT00000028522|Sec1|ENSRNOG00000021014|secretory blood group 1 [Source:RGD Symbol%3BAcc:1562499]
rn6_v1_chr11_-_80650802_80650802	0.0659553	Hoxa2	ENSRNOT00000043660|Rtp4|ENSRNOG00000028895|receptor (chemosensory) transporter protein 4 [Source:RGD Symbol%3BAcc:1306974]
rn6_v1_chr19_-_44211208_44211208	0.0659072	Hoxa2	ENSRNOT00000026309|Adat1|ENSRNOG00000019434|adenosine deaminase%2C tRNA-specific 1 [Source:RGD Symbol%3BAcc:1591020]
rn6_v1_chr4_+_61814974_61814974	0.0654857	Hoxa2	ENSRNOT00000074951|Akr1b10|ENSRNOG00000009734|aldo-keto reductase family 1 member B10 [Source:RGD Symbol%3BAcc:1308277]
rn6_v1_chr1_-_37741709_37741709	0.064745	Hoxa2	ENSRNOT00000079186|Fastkd3|ENSRNOG00000027422|FAST kinase domains 3 [Source:RGD Symbol%3BAcc:1309729]
rn6_v1_chr8_-_120446455_120446507	0.064565	Hoxa2	ENSRNOT00000085161|Arpp21|ENSRNOG00000008919|cAMP regulated phosphoprotein 21 [Source:RGD Symbol%3BAcc:1593239]	ENSRNOT00000042854|Arpp21|ENSRNOG00000008919|cAMP regulated phosphoprotein 21 [Source:RGD Symbol%3BAcc:1593239]	ENSRNOT00000037199|Arpp21|ENSRNOG00000008919|cAMP regulated phosphoprotein 21 [Source:RGD Symbol%3BAcc:1593239]
rn6_v1_chr2_+_147496229_147496229	0.0640654	Hoxa2	ENSRNOT00000022105|Tm4sf4|ENSRNOG00000016437|transmembrane 4 L six family member 4 [Source:RGD Symbol%3BAcc:621784]
rn6_v1_chr1_-_259484569_259484569	0.0639752	Hoxa2	ENSRNOT00000021289|Sorbs1|ENSRNOG00000015658|sorbin and SH3 domain containing 1 [Source:RGD Symbol%3BAcc:1586598]	ENSRNOT00000021114|Sorbs1|ENSRNOG00000015658|sorbin and SH3 domain containing 1 [Source:RGD Symbol%3BAcc:1586598]	ENSRNOT00000021229|Sorbs1|ENSRNOG00000015658|sorbin and SH3 domain containing 1 [Source:RGD Symbol%3BAcc:1586598]	ENSRNOT00000021347|Sorbs1|ENSRNOG00000015658|sorbin and SH3 domain containing 1 [Source:RGD Symbol%3BAcc:1586598]	ENSRNOT00000021226|Sorbs1|ENSRNOG00000015658|sorbin and SH3 domain containing 1 [Source:RGD Symbol%3BAcc:1586598]
rn6_v1_chr11_-_83483513_83483513	0.0638329	Hoxa2	ENSRNOT00000084380|AABR07034673.1|ENSRNOG00000059680|
rn6_v1_chr7_-_124929025_124929025	0.0636971	Hoxa2	ENSRNOT00000015447|Efcab6|ENSRNOG00000011094|EF-hand calcium binding domain 6 [Source:RGD Symbol%3BAcc:1309065]
rn6_v1_chr2_-_234296145_234296145	0.0633788	Hoxa2	ENSRNOT00000014155|Elovl6|ENSRNOG00000010468|ELOVL fatty acid elongase 6 [Source:RGD Symbol%3BAcc:620585]
rn6_v1_chr18_-_86878142_86878142	0.0628394	Hoxa2	ENSRNOT00000058139|Dok6|ENSRNOG00000038190|docking protein 6 [Source:RGD Symbol%3BAcc:1564376]
rn6_v1_chr12_-_37688743_37688743	0.0623657	Hoxa2	ENSRNOT00000030251|RGD1563482|ENSRNOG00000001073|similar to hypothetical protein FLJ38663 [Source:RGD Symbol%3BAcc:1563482]
rn6_v1_chr2_+_57276919_57276919	0.0620447	Hoxa2	ENSRNOT00000063899|RGD1310081|ENSRNOG00000042118|similar to hypothetical protein FLJ13231 [Source:RGD Symbol%3BAcc:1310081]
rn6_v1_chr9_+_12475006_12475006	0.0617315	Hoxa2	ENSRNOT00000079703|LOC100912293|ENSRNOG00000047581|uncharacterized LOC100912293 [Source:RGD Symbol%3BAcc:6487593]
rn6_v1_chrM_+_11736_11736	0.0617228	Hoxa2	ENSRNOT00000048767|Mt-nd5|ENSRNOG00000029971|mitochondrially encoded NADH dehydrogenase 5 [Source:RGD Symbol%3BAcc:620560]
rn6_v1_chr8_-_36374673_36374673	0.0610948	Hoxa2	ENSRNOT00000013763|Dcps|ENSRNOG00000009993|decapping enzyme%2C scavenger [Source:RGD Symbol%3BAcc:628887]
rn6_v1_chr8_+_72029489_72029489	0.060818	Hoxa2	ENSRNOT00000089336|Herc1|ENSRNOG00000051671|HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 [Source:RGD Symbol%3BAcc:1306366]
rn6_v1_chrX_-_142248369_142248369	0.0606504	Hoxa2	ENSRNOT00000091330|Fgf13|ENSRNOG00000042753|fibroblast growth factor 13 [Source:RGD Symbol%3BAcc:620164]
rn6_v1_chrX_+_70438617_70438617	0.0605781	Hoxa2	ENSRNOT00000076671|Arr3|ENSRNOG00000002904|arrestin 3 [Source:RGD Symbol%3BAcc:621385]
rn6_v1_chr12_-_16027881_16027881	0.0605506	Hoxa2	ENSRNOT00000064726|Brat1|ENSRNOG00000001236|BRCA1-associated ATM activator 1 [Source:RGD Symbol%3BAcc:1565146]
rn6_v1_chrX_+_51286737_51286737	0.0601862	Hoxa2	ENSRNOT00000035692|Dmd|ENSRNOG00000046366|dystrophin [Source:RGD Symbol%3BAcc:2507]
rn6_v1_chr16_-_32439421_32439421	0.0593933	Hoxa2	ENSRNOT00000043100|Nek1|ENSRNOG00000010418|NIMA-related kinase 1 [Source:RGD Symbol%3BAcc:1309375]
rn6_v1_chr7_+_123482255_123482255	0.0593636	Hoxa2	ENSRNOT00000064487|LOC688613|ENSRNOG00000043197|hypothetical protein LOC688613 [Source:RGD Symbol%3BAcc:1586487]
rn6_v1_chr9_+_8399632_8399632	0.0592137	Hoxa2	ENSRNOT00000092165|LOC100360856|ENSRNOG00000048686|hypothetical protein LOC100360856 [Source:RGD Symbol%3BAcc:2321302]
rn6_v1_chr1_+_72956026_72956026	0.0587995	Hoxa2	ENSRNOT00000031462|Rdh13|ENSRNOG00000027919|retinol dehydrogenase 13 [Source:RGD Symbol%3BAcc:1304959]
rn6_v1_chr3_+_69549673_69549673	0.0586916	Hoxa2	ENSRNOT00000043974|Zfp804a|ENSRNOG00000038004|zinc finger protein 804A [Source:RGD Symbol%3BAcc:1305239]
rn6_v1_chr3_+_163664136_163664136	0.0582275	Hoxa2	ENSRNOT00000010210|Cse1l|ENSRNOG00000007665|chromosome segregation 1 like [Source:RGD Symbol%3BAcc:1307536]
rn6_v1_chr1_+_164706276_164706276	0.0581912	Hoxa2	ENSRNOT00000024311|Olr36|ENSRNOG00000030788|olfactory receptor 36 [Source:RGD Symbol%3BAcc:1333325]
rn6_v1_chr13_-_81698833_81698833	0.0575882	Hoxa2	ENSRNOT00000005148|Gorab|ENSRNOG00000003861|golgin%2C RAB6-interacting [Source:RGD Symbol%3BAcc:1564990]
rn6_v1_chr18_-_81682206_81682206	0.0575468	Hoxa2	ENSRNOT00000058219|LOC100359752|ENSRNOG00000038241|hypothetical protein LOC100359752 [Source:RGD Symbol%3BAcc:2323488]
rn6_v1_chr2_-_20152884_20152884	0.0568956	Hoxa2	ENSRNOT00000021941|Atg10|ENSRNOG00000016342|autophagy related 10 [Source:RGD Symbol%3BAcc:1587624]
rn6_v1_chr16_-_9658484_9658484	0.0568391	Hoxa2	ENSRNOT00000065216|Mapk8|ENSRNOG00000020155|mitogen-activated protein kinase 8 [Source:RGD Symbol%3BAcc:621506]
rn6_v1_chr7_-_130827152_130827152	0.0562374	Hoxa2	ENSRNOT00000019406|Syt10|ENSRNOG00000014296|synaptotagmin 10 [Source:RGD Symbol%3BAcc:62041]
rn6_v1_chr6_+_64297888_64297896	0.0555845	Hoxa2	ENSRNOT00000050222|Nrcam|ENSRNOG00000004067|neuronal cell adhesion molecule [Source:RGD Symbol%3BAcc:3209]	ENSRNOT00000083088|Nrcam|ENSRNOG00000004067|neuronal cell adhesion molecule [Source:RGD Symbol%3BAcc:3209]	ENSRNOT00000093147|Nrcam|ENSRNOG00000004067|neuronal cell adhesion molecule [Source:RGD Symbol%3BAcc:3209]
rn6_v1_chr10_-_95262024_95262024	0.054243	Hoxa2	ENSRNOT00000066487|Bptf|ENSRNOG00000047296|bromodomain PHD finger transcription factor [Source:RGD Symbol%3BAcc:1307039]
rn6_v1_chr4_-_129515435_129515435	0.0538567	Hoxa2	ENSRNOT00000039353|Eogt|ENSRNOG00000024533|EGF domain specific O-linked N-acetylglucosamine transferase [Source:RGD Symbol%3BAcc:1359357]
rn6_v1_chr8_-_39201588_39201588	0.0535314	Hoxa2	ENSRNOT00000011226|Stt3a|ENSRNOG00000031896|STT3A%2C catalytic subunit of the oligosaccharyltransferase complex [Source:RGD Symbol%3BAcc:1565793]
rn6_v1_chr17_+_9746485_9746485	0.0532494	Hoxa2	ENSRNOT00000072298|Pfn3|ENSRNOG00000047752|profilin 3 [Source:RGD Symbol%3BAcc:1587838]
rn6_v1_chr6_+_47916188_47916188	0.0531379	Hoxa2	ENSRNOT00000011819|Rnaseh1|ENSRNOG00000008584|ribonuclease H1 [Source:RGD Symbol%3BAcc:1309012]
rn6_v1_chr8_-_13906355_13906355	0.0529506	Hoxa2	ENSRNOT00000029634|Cep295|ENSRNOG00000010999|centrosomal protein 295 [Source:RGD Symbol%3BAcc:1311723]
rn6_v1_chr9_+_8349033_8349033	0.0529042	Hoxa2	ENSRNOT00000073775|LOC100360856|ENSRNOG00000048686|hypothetical protein LOC100360856 [Source:RGD Symbol%3BAcc:2321302]
rn6_v1_chr6_-_1454480_1454480	0.0525911	Hoxa2	ENSRNOT00000072810|Eif2ak2|ENSRNOG00000048315|eukaryotic translation initiation factor 2-alpha kinase 2 [Source:RGD Symbol%3BAcc:3402]
rn6_v1_chr8_-_49271834_49271834	0.0524538	Hoxa2	ENSRNOT00000085022|Ube4a|ENSRNOG00000026833|ubiquitination factor E4A [Source:RGD Symbol%3BAcc:1303173]
rn6_v1_chr16_-_32299542_32299542	0.0521111	Hoxa2	ENSRNOT00000072321|AABR07025299.1|ENSRNOG00000047664|
rn6_v1_chr1_-_140535934_140535934	0.0515163	Hoxa2	ENSRNOT00000065457|Det1|ENSRNOG00000018515|de-etiolated homolog 1 (Arabidopsis) [Source:RGD Symbol%3BAcc:1309793]
rn6_v1_chr4_-_155275161_155275161	0.0509577	Hoxa2	ENSRNOT00000032690|Rimklb|ENSRNOG00000023814|ribosomal modification protein rimK-like family member B [Source:RGD Symbol%3BAcc:1560851]
rn6_v1_chr1_-_247985497_247985497	0.0508624	Hoxa2	ENSRNOT00000078998|Ranbp6|ENSRNOG00000053859|RAN binding protein 6 [Source:RGD Symbol%3BAcc:1305165]
rn6_v1_chr15_+_41448064_41448064	0.05082	Hoxa2	ENSRNOT00000019551|Sacs|ENSRNOG00000014509|sacsin molecular chaperone [Source:RGD Symbol%3BAcc:1307281]
rn6_v1_chr7_+_132378273_132378273	0.0506863	Hoxa2	ENSRNOT00000010990|LOC690142|ENSRNOG00000025898|hypothetical protein LOC690142 [Source:RGD Symbol%3BAcc:1584027]
rn6_v1_chr2_-_91497091_91497091	0.0505197	Hoxa2	ENSRNOT00000015185|Pcsk1|ENSRNOG00000011107|proprotein convertase subtilisin/kexin type 1 [Source:RGD Symbol%3BAcc:3272]
rn6_v1_chr16_+_48120864_48120864	0.050215	Hoxa2	ENSRNOT00000068562|Stox2|ENSRNOG00000009590|storkhead box 2 [Source:RGD Symbol%3BAcc:708477]
rn6_v1_chr16_-_81583374_81583374	0.0502055	Hoxa2	ENSRNOT00000092501|LOC103693999|ENSRNOG00000019346|transmembrane and coiled-coil domain-containing protein 3 [Source:RGD Symbol%3BAcc:9333008]
rn6_v1_chr6_+_49968473_49968473	0.0501276	Hoxa2	ENSRNOT00000007466|Fam110c|ENSRNOG00000005660|family with sequence similarity 110%2C member C [Source:RGD Symbol%3BAcc:1564713]
rn6_v1_chr5_-_164648328_164648328	0.049969	Hoxa2	ENSRNOT00000090811|Zfp933|ENSRNOG00000056374|zinc finger protein 933 [Source:MGI Symbol%3BAcc:MGI:1922865]
rn6_v1_chr4_-_81968832_81968832	0.0499461	Hoxa2	ENSRNOT00000016608|Skap2|ENSRNOG00000012228|src kinase associated phosphoprotein 2 [Source:RGD Symbol%3BAcc:620159]
rn6_v1_chr8_-_92942076_92942076	0.049372	Hoxa2	ENSRNOT00000056937|Fam46a|ENSRNOG00000010240|family with sequence similarity 46%2C member A [Source:RGD Symbol%3BAcc:1311381]
rn6_v1_chr14_-_8600512_8600512	0.0492313	Hoxa2	ENSRNOT00000092537|Arhgap24|ENSRNOG00000056944|Rho GTPase activating protein 24 [Source:RGD Symbol%3BAcc:1306669]
rn6_v1_chrX_-_915953_915953	0.0491363	Hoxa2	ENSRNOT00000075264|Spaca5|ENSRNOG00000045622|sperm acrosome associated 5 [Source:RGD Symbol%3BAcc:1584964]
rn6_v1_chr1_-_16687817_16687817	0.0486225	Hoxa2	ENSRNOT00000091376|Myb|ENSRNOG00000055858|MYB proto-oncogene%2C transcription factor [Source:RGD Symbol%3BAcc:1560020]	ENSRNOT00000081620|Myb|ENSRNOG00000055858|MYB proto-oncogene%2C transcription factor [Source:RGD Symbol%3BAcc:1560020]
rn6_v1_chr6_+_97168453_97168453	0.0483879	Hoxa2	ENSRNOT00000085790|Syt16|ENSRNOG00000056012|synaptotagmin 16 [Source:RGD Symbol%3BAcc:1564654]
rn6_v1_chr13_+_51384389_51384389	0.0483309	Hoxa2	ENSRNOT00000087025|Kdm5b|ENSRNOG00000060544|lysine demethylase 5B [Source:RGD Symbol%3BAcc:1565602]
rn6_v1_chr9_+_43889473_43889473	0.0482441	Hoxa2	ENSRNOT00000024330|Inpp4a|ENSRNOG00000017660|inositol polyphosphate-4-phosphatase type I A [Source:RGD Symbol%3BAcc:68386]
rn6_v1_chr10_+_76343847_76343847	0.0475971	Hoxa2	ENSRNOT00000055674|Trim25|ENSRNOG00000002341|tripartite motif-containing 25 [Source:RGD Symbol%3BAcc:1594396]
rn6_v1_chr5_+_156615886_156615886	0.0475275	Hoxa2	ENSRNOT00000076439|Sh2d5|ENSRNOG00000014909|SH2 domain containing 5 [Source:RGD Symbol%3BAcc:1305952]
rn6_v1_chr9_+_73319710_73319710	0.047213	Hoxa2	ENSRNOT00000092485|Map2|ENSRNOG00000011841|microtubule-associated protein 2 [Source:RGD Symbol%3BAcc:3044]
rn6_v1_chr2_+_187447501_187447501	0.0471719	Hoxa2	ENSRNOT00000038589|Iqgap3|ENSRNOG00000027894|IQ motif containing GTPase activating protein 3 [Source:RGD Symbol%3BAcc:1305951]
rn6_v1_chrX_-_1076850_1076850	0.0465246	Hoxa2	ENSRNOT00000090671|LOC100363372|ENSRNOG00000057227|zinc finger protein 81 (HFZ20)-like [Source:RGD Symbol%3BAcc:2323171]
rn6_v1_chr18_+_17091310_17091310	0.0462815	Hoxa2	ENSRNOT00000093285|Fhod3|ENSRNOG00000027230|formin homology 2 domain containing 3 [Source:RGD Symbol%3BAcc:2322319]
rn6_v1_chrX_-_156891213_156891213	0.045758	Hoxa2	ENSRNOT00000082899|Avpr2|ENSRNOG00000059862|arginine vasopressin receptor 2 [Source:RGD Symbol%3BAcc:2186]
rn6_v1_chr10_+_36589181_36589181	0.0457283	Hoxa2	ENSRNOT00000045596|Zfp354a|ENSRNOG00000003634|zinc finger protein 354A [Source:RGD Symbol%3BAcc:2967]
rn6_v1_chr5_-_145123861_145123861	0.0456115	Hoxa2	ENSRNOT00000064015|Zmym1|ENSRNOG00000013855|zinc finger MYM-type containing 1 [Source:RGD Symbol%3BAcc:1307027]
rn6_v1_chr10_-_49149479_49149479	0.0451026	Hoxa2	ENSRNOT00000004291|Zfp287|ENSRNOG00000003215|zinc finger protein 287 [Source:RGD Symbol%3BAcc:1308617]
rn6_v1_chr7_-_107223047_107223047	0.045016	Hoxa2	ENSRNOT00000007250|Lrrc6|ENSRNOG00000005233|leucine rich repeat containing 6 [Source:RGD Symbol%3BAcc:1559937]	ENSRNOT00000084875|Lrrc6|ENSRNOG00000005233|leucine rich repeat containing 6 [Source:RGD Symbol%3BAcc:1559937]
rn6_v1_chrX_+_123751293_123751293	0.0449726	Hoxa2	ENSRNOT00000089883|Nkap|ENSRNOG00000053813|NFKB activating protein [Source:RGD Symbol%3BAcc:1565955]
rn6_v1_chr19_+_25043680_25043680	0.0448533	Hoxa2	ENSRNOT00000043971|Adgrl1|ENSRNOG00000029134|adhesion G protein-coupled receptor L1 [Source:RGD Symbol%3BAcc:620768]
rn6_v1_chr4_+_170820594_170820594	0.0447193	Hoxa2	ENSRNOT00000032568|LOC500354|ENSRNOG00000027979|similar to C030030A07Rik protein [Source:RGD Symbol%3BAcc:1563896]
rn6_v1_chr7_-_139675245_139675245	0.0444977	Hoxa2	ENSRNOT00000030943|Senp1|ENSRNOG00000022260|SUMO1/sentrin specific peptidase 1 [Source:RGD Symbol%3BAcc:1310275]
rn6_v1_chr19_-_50220455_50220455	0.0443776	Hoxa2	ENSRNOT00000079760|Sdr42e1|ENSRNOG00000051819|short chain dehydrogenase/reductase family 42E%2C member 1 [Source:RGD Symbol%3BAcc:1308481]
rn6_v1_chr1_-_38538987_38538987	0.0441254	Hoxa2	ENSRNOT00000090406|LOC102551340|ENSRNOG00000047145|zinc finger protein 728-like [Source:RGD Symbol%3BAcc:7697243]	ENSRNOT00000071275|LOC102551340|ENSRNOG00000047145|zinc finger protein 728-like [Source:RGD Symbol%3BAcc:7697243]
rn6_v1_chr2_-_187822997_187822997	0.0438531	Hoxa2	ENSRNOT00000092932|Sema4a|ENSRNOG00000019737|semaphorin 4A [Source:RGD Symbol%3BAcc:1304636]
rn6_v1_chr3_+_121408146_121408146	0.0438014	Hoxa2	ENSRNOT00000023708|Fbln7|ENSRNOG00000017550|fibulin 7 [Source:RGD Symbol%3BAcc:1310131]
rn6_v1_chr17_+_34704616_34704664	0.0436785	Hoxa2	ENSRNOT00000090706|Exoc2|ENSRNOG00000060266|exocyst complex component 2 [Source:RGD Symbol%3BAcc:619961]	ENSRNOT00000083674|Exoc2|ENSRNOG00000060266|exocyst complex component 2 [Source:RGD Symbol%3BAcc:619961]	ENSRNOT00000077110|Exoc2|ENSRNOG00000060266|exocyst complex component 2 [Source:RGD Symbol%3BAcc:619961]
rn6_v1_chr10_+_67532030_67532030	0.0433604	Hoxa2	ENSRNOT00000005428|Rhot1|ENSRNOG00000004093|ras homolog family member T1 [Source:RGD Symbol%3BAcc:1307023]
rn6_v1_chr7_+_20462081_20462081	0.0433231	Hoxa2	ENSRNOT00000088383|AABR07056131.1|ENSRNOG00000051596|
rn6_v1_chr12_-_12546111_12546111	0.0432043	Hoxa2	ENSRNOT00000046381|Lmtk2|ENSRNOG00000025155|lemur tyrosine kinase 2 [Source:RGD Symbol%3BAcc:1598332]
rn6_v1_chr9_-_50868238_50868238	0.0431032	Hoxa2	ENSRNOT00000015600|Tex30|ENSRNOG00000011658|testis expressed 30 [Source:RGD Symbol%3BAcc:1309095]
rn6_v1_chr4_+_157524423_157524423	0.0430693	Hoxa2	ENSRNOT00000036654|Zfp384|ENSRNOG00000017066|zinc finger protein 384 [Source:RGD Symbol%3BAcc:708346]
rn6_v1_chr19_-_37210412_37210412	0.0429634	Hoxa2	ENSRNOT00000083097|B3gnt9|ENSRNOG00000053895|UDP-GlcNAc:betaGal beta-1%2C3-N-acetylglucosaminyltransferase 9 [Source:RGD Symbol%3BAcc:1310170]
rn6_v1_chr18_+_27576129_27576129	0.0429493	Hoxa2	ENSRNOT00000070930|Kdm3b|ENSRNOG00000050200|lysine demethylase 3B [Source:RGD Symbol%3BAcc:1583423]
rn6_v1_chr19_+_25983169_25983169	0.0429287	Hoxa2	ENSRNOT00000004404|Syce2|ENSRNOG00000003279|synaptonemal complex central element protein 2 [Source:RGD Symbol%3BAcc:1311867]
rn6_v1_chrX_+_112358748_112358748	0.0427044	Hoxa2	ENSRNOT00000074776|Atg4a|ENSRNOG00000050960|autophagy related 4A%2C cysteine peptidase [Source:RGD Symbol%3BAcc:1596915]
rn6_v1_chr8_-_55402711_55402711	0.042685	Hoxa2	ENSRNOT00000091732|Sik2|ENSRNOG00000043498|salt-inducible kinase 2 [Source:RGD Symbol%3BAcc:1559698]
rn6_v1_chr9_+_43093138_43093138	0.0426418	Hoxa2	ENSRNOT00000021592|Cnnm3|ENSRNOG00000016032|cyclin and CBS domain divalent metal cation transport mediator 3 [Source:RGD Symbol%3BAcc:1307926]
rn6_v1_chr4_-_22192474_22192474	0.042589	Hoxa2	ENSRNOT00000043822|Abcb1a|ENSRNOG00000008012|ATP binding cassette subfamily B member 1A [Source:RGD Symbol%3BAcc:619951]
rn6_v1_chrX_-_74706214_74706214	0.0424477	Hoxa2	ENSRNOT00000040637|Slc16a2|ENSRNOG00000002832|solute carrier family 16 member 2 [Source:RGD Symbol%3BAcc:628608]
rn6_v1_chr1_-_212354273_212354273	0.0418432	Hoxa2	ENSRNOT00000024573|Tubgcp2|ENSRNOG00000018137|tubulin%2C gamma complex associated protein 2 [Source:RGD Symbol%3BAcc:1309597]
rn6_v1_chr4_+_117594805_117594805	0.0417148	Hoxa2	ENSRNOT00000074924|LOC103690067|ENSRNOG00000050645|EKC/KEOPS complex subunit Tprkb [Source:RGD Symbol%3BAcc:9395731]
rn6_v1_chr5_-_113578928_113578928	0.0415893	Hoxa2	ENSRNOT00000010621|Plaa|ENSRNOG00000007753|phospholipase A2%2C activating protein [Source:RGD Symbol%3BAcc:621245]
rn6_v1_chrX_-_14910727_14910778	0.0415068	Hoxa2	ENSRNOT00000085079|Ssx1|ENSRNOG00000027850|SSX family member 1 [Source:RGD Symbol%3BAcc:1593374]	ENSRNOT00000030146|Ssx1|ENSRNOG00000027850|SSX family member 1 [Source:RGD Symbol%3BAcc:1593374]
rn6_v1_chr17_+_81798756_81798756	0.0411615	Hoxa2	ENSRNOT00000066826|Cacnb2|ENSRNOG00000018378|calcium voltage-gated channel auxiliary subunit beta 2 [Source:RGD Symbol%3BAcc:67385]
rn6_v1_chr6_+_137959171_137959171	0.0411149	Hoxa2	ENSRNOT00000006835|Crip1|ENSRNOG00000027990|cysteine rich protein 1 [Source:RGD Symbol%3BAcc:1597237]
rn6_v1_chr9_-_81864202_81864202	0.0410274	Hoxa2	ENSRNOT00000084964|Zfp142|ENSRNOG00000022414|zinc finger protein 142 [Source:RGD Symbol%3BAcc:1309648]
rn6_v1_chr20_-_54517709_54517709	0.0409904	Hoxa2	ENSRNOT00000076234|Grik2|ENSRNOG00000000368|glutamate ionotropic receptor kainate type subunit 2 [Source:RGD Symbol%3BAcc:2733]
rn6_v1_chr1_+_25173242_25173242	0.0409035	Hoxa2	ENSRNOT00000016518|Clvs2|ENSRNOG00000012122|clavesin 2 [Source:RGD Symbol%3BAcc:1306801]
rn6_v1_chr3_+_79498179_79498179	0.0409002	Hoxa2	ENSRNOT00000030750|Nup160|ENSRNOG00000028215|nucleoporin 160 [Source:RGD Symbol%3BAcc:1311052]
rn6_v1_chr19_+_43338166_43338171	0.0408443	Hoxa2	ENSRNOT00000091720|Fuk|ENSRNOG00000059453|fucokinase [Source:RGD Symbol%3BAcc:1307000]	ENSRNOT00000084739|Fuk|ENSRNOG00000059453|fucokinase [Source:RGD Symbol%3BAcc:1307000]
rn6_v1_chr20_+_47395014_47395014	0.0408403	Hoxa2	ENSRNOT00000057116|Ostm1|ENSRNOG00000037647|osteopetrosis associated transmembrane protein 1 [Source:RGD Symbol%3BAcc:1564976]
rn6_v1_chr3_-_2853272_2853272	0.0406457	Hoxa2	ENSRNOT00000023022|Fcna|ENSRNOG00000017063|ficolin A [Source:RGD Symbol%3BAcc:621221]
rn6_v1_chr5_-_50068706_50068706	0.0405924	Hoxa2	ENSRNOT00000084643|Orc3|ENSRNOG00000008314|origin recognition complex%2C subunit 3 [Source:RGD Symbol%3BAcc:1308457]
rn6_v1_chrX_-_72034099_72034099	0.0405904	Hoxa2	ENSRNOT00000004310|Ercc6l|ENSRNOG00000003208|ERCC excision repair 6 like%2C spindle assembly checkpoint helicase [Source:RGD Symbol%3BAcc:1565734]
rn6_v1_chr8_-_8524643_8524643	0.0405239	Hoxa2	ENSRNOT00000009418|Cntn5|ENSRNOG00000007038|contactin 5 [Source:RGD Symbol%3BAcc:621302]
rn6_v1_chrX_+_21499934_21499934	0.0403032	Hoxa2	ENSRNOT00000090890|Huwe1|ENSRNOG00000061262|HECT%2C UBA and WWE domain containing 1%2C E3 ubiquitin protein ligase [Source:RGD Symbol%3BAcc:1561763]	ENSRNOT00000081037|Huwe1|ENSRNOG00000061262|HECT%2C UBA and WWE domain containing 1%2C E3 ubiquitin protein ligase [Source:RGD Symbol%3BAcc:1561763]
rn6_v1_chr5_-_164348713_164348713	0.0401822	Hoxa2	ENSRNOT00000087044|LOC500584|ENSRNOG00000054488|similar to casein kinase 1%2C gamma 3 isoform 2 [Source:RGD Symbol%3BAcc:1598209]
rn6_v1_chr4_+_78371121_78371121	0.0401288	Hoxa2	ENSRNOT00000059157|Gimap1|ENSRNOG00000042229|GTPase%2C IMAP family member 1 [Source:RGD Symbol%3BAcc:1306777]
rn6_v1_chr8_+_36766977_36766977	0.0400816	Hoxa2	ENSRNOT00000017648|Pus3|ENSRNOG00000012994|pseudouridylate synthase 3 [Source:RGD Symbol%3BAcc:1310757]
rn6_v1_chr12_+_12649861_12649861	0.040046	Hoxa2	ENSRNOT00000092402|Ccz1b|ENSRNOG00000001032|CCZ1 homolog B%2C vacuolar protein trafficking and biogenesis associated [Source:RGD Symbol%3BAcc:1306410]
rn6_v1_chr4_-_124338176_124338176	0.039968	Hoxa2	ENSRNOT00000016628|Prickle2|ENSRNOG00000012364|prickle planar cell polarity protein 2 [Source:RGD Symbol%3BAcc:1306723]
rn6_v1_chr4_-_9060554_9060554	0.0397527	Hoxa2	ENSRNOT00000046248|AABR07059215.1|ENSRNOG00000031486|
rn6_v1_chr3_-_146764015_146764015	0.0396708	Hoxa2	ENSRNOT00000068689|Ninl|ENSRNOG00000027747|ninein-like [Source:RGD Symbol%3BAcc:1306152]
rn6_v1_chr1_-_167884690_167884690	0.0396077	Hoxa2	ENSRNOT00000091372|Olr61|ENSRNOG00000061614|olfactory receptor 61 [Source:RGD Symbol%3BAcc:1333377]
rn6_v1_chr1_+_91746486_91746486	0.0393011	Hoxa2	ENSRNOT00000047772|AC136661.1|ENSRNOG00000037380|
rn6_v1_chr1_-_62558033_62558033	0.0386834	Hoxa2	ENSRNOT00000015520|Zfp40|ENSRNOG00000011675|zinc finger protein 40 [Source:RGD Symbol%3BAcc:1593410]
rn6_v1_chr2_-_33841499_33841499	0.0384825	Hoxa2	ENSRNOT00000040533|Srek1|ENSRNOG00000032735|splicing regulatory glutamic acid and lysine rich protein 1 [Source:RGD Symbol%3BAcc:621696]
rn6_v1_chr17_-_6660536_6660536	0.037766	Hoxa2	ENSRNOT00000025812|Rmi1|ENSRNOG00000019108|RecQ mediated genome instability 1 [Source:RGD Symbol%3BAcc:1310671]
rn6_v1_chr17_-_43422846_43422846	0.0373051	Hoxa2	ENSRNOT00000050526|Hist1h2aa|ENSRNOG00000048122|histone cluster 1 H2A family member a [Source:RGD Symbol%3BAcc:3854]
rn6_v1_chr10_-_25910298_25910325	0.0371343	Hoxa2	ENSRNOT00000065633|Ccng1|ENSRNOG00000003256|cyclin G1 [Source:RGD Symbol%3BAcc:2295]	ENSRNOT00000079646|Ccng1|ENSRNOG00000003256|cyclin G1 [Source:RGD Symbol%3BAcc:2295]
rn6_v1_chr3_-_133122691_133122691	0.0370991	Hoxa2	ENSRNOT00000083637|Tasp1|ENSRNOG00000004493|taspase 1 [Source:RGD Symbol%3BAcc:1308591]
rn6_v1_chr2_+_234375315_234375315	0.0370917	Hoxa2	ENSRNOT00000071270|LOC102549542|ENSRNOG00000048949|elongation of very long chain fatty acids protein 6-like [Source:RGD Symbol%3BAcc:7527008]
rn6_v1_chr10_-_8498422_8498422	0.0369732	Hoxa2	ENSRNOT00000082332|Rbfox1|ENSRNOG00000002827|RNA binding protein%2C fox-1 homolog 1 [Source:RGD Symbol%3BAcc:1311210]
rn6_v1_chrX_+_11050121_11050121	0.0367861	Hoxa2	ENSRNOT00000093665|Med14|ENSRNOG00000003792|mediator complex subunit 14 [Source:RGD Symbol%3BAcc:1560170]
rn6_v1_chrM_+_7919_7919	0.0365615	Hoxa2	ENSRNOT00000046108|Mt-atp6|ENSRNOG00000031979|mitochondrially encoded ATP synthase 6 [Source:RGD Symbol%3BAcc:621239]
rn6_v1_chr3_-_119405453_119405453	0.0365184	Hoxa2	ENSRNOT00000090355|Sppl2a|ENSRNOG00000011652|signal peptide peptidase-like 2A [Source:RGD Symbol%3BAcc:1563001]
rn6_v1_chr14_-_45863877_45863877	0.0359031	Hoxa2	ENSRNOT00000002977|Pgm2|ENSRNOG00000002185|phosphoglucomutase 2 [Source:RGD Symbol%3BAcc:1306061]
rn6_v1_chr7_+_126756151_126756179	0.0358937	Hoxa2	ENSRNOT00000022511|Trmu|ENSRNOG00000016465|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:RGD Symbol%3BAcc:1311229]	ENSRNOT00000065283|Trmu|ENSRNOG00000016465|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:RGD Symbol%3BAcc:1311229]
rn6_v1_chr3_-_104502471_104502471	0.0357746	Hoxa2	ENSRNOT00000040306|Ryr3|ENSRNOG00000006645|ryanodine receptor 3 [Source:RGD Symbol%3BAcc:68952]
rn6_v1_chr4_+_138269142_138269142	0.0356675	Hoxa2	ENSRNOT00000007788|Cntn4|ENSRNOG00000005652|contactin 4 [Source:RGD Symbol%3BAcc:621361]
rn6_v1_chr9_+_10061978_10061978	0.0356035	Hoxa2	ENSRNOT00000075180|Acer1|ENSRNOG00000047368|alkaline ceramidase 1 [Source:RGD Symbol%3BAcc:1588582]
rn6_v1_chr8_+_26652121_26652121	0.0353776	Hoxa2	ENSRNOT00000009342|Eepd1|ENSRNOG00000006931|endonuclease/exonuclease/phosphatase family domain containing 1 [Source:RGD Symbol%3BAcc:1307401]
rn6_v1_chr8_+_5606592_5606592	0.0353473	Hoxa2	ENSRNOT00000011727|Mmp12|ENSRNOG00000030187|matrix metallopeptidase 12 [Source:RGD Symbol%3BAcc:620195]
rn6_v1_chr2_+_92549479_92549479	0.0352659	Hoxa2	ENSRNOT00000082912|tGap1|ENSRNOG00000022511|GTPase activating protein testicular GAP1 [Source:RGD Symbol%3BAcc:1359558]
rn6_v1_chr13_-_70625842_70625842	0.0351184	Hoxa2	ENSRNOT00000092499|Lamc2|ENSRNOG00000002667|laminin subunit gamma 2 [Source:RGD Symbol%3BAcc:621053]
rn6_v1_chr20_+_7431355_7431355	0.0349801	Hoxa2	ENSRNOT00000049592|Uhrf1bp1|ENSRNOG00000000495|UHRF1 binding protein 1 [Source:RGD Symbol%3BAcc:1307264]
rn6_v1_chr10_+_46018659_46018659	0.034977	Hoxa2	ENSRNOT00000040865|Mprip|ENSRNOG00000003226|myosin phosphatase Rho interacting protein [Source:RGD Symbol%3BAcc:619947]	ENSRNOT00000004357|Mprip|ENSRNOG00000003226|myosin phosphatase Rho interacting protein [Source:RGD Symbol%3BAcc:619947]
rn6_v1_chr15_+_25294425_25294425	0.0349499	Hoxa2	ENSRNOT00000017871|Tmem260|ENSRNOG00000013353|transmembrane protein 260 [Source:RGD Symbol%3BAcc:1562018]
rn6_v1_chrX_+_153064028_153064028	0.0349368	Hoxa2	ENSRNOT00000079424|Pnma3|ENSRNOG00000052022|paraneoplastic Ma antigen 3 [Source:RGD Symbol%3BAcc:1563752]
rn6_v1_chr12_-_17522534_17522534	0.034877	Hoxa2	ENSRNOT00000047287|Sun1|ENSRNOG00000001299|Sad1 and UNC84 domain containing 1 [Source:RGD Symbol%3BAcc:1359142]
rn6_v1_chr7_+_131330913_131330913	0.0347271	Hoxa2	ENSRNOT00000019672|Alg10|ENSRNOG00000014511|ALG10%2C alpha-1%2C2-glucosyltransferase [Source:RGD Symbol%3BAcc:708500]
rn6_v1_chr1_-_67302751_67302751	0.0347159	Hoxa2	ENSRNOT00000041518|Vom1r42|ENSRNOG00000028877|vomeronasal 1 receptor 42 [Source:RGD Symbol%3BAcc:1549734]
rn6_v1_chr9_-_10290035_10290035	0.034635	Hoxa2	ENSRNOT00000075201|Prr22|ENSRNOG00000047295|proline rich 22 [Source:RGD Symbol%3BAcc:1595447]
rn6_v1_chr6_+_144071914_144071914	0.0343185	Hoxa2	ENSRNOT00000056743|LOC102547216|ENSRNOG00000037486|uncharacterized LOC102547216 [Source:RGD Symbol%3BAcc:7627810]
rn6_v1_chr8_+_32452885_32452885	0.0343013	Hoxa2	ENSRNOT00000010423|Prdm10|ENSRNOG00000007853|PR/SET domain 10 [Source:RGD Symbol%3BAcc:1560384]
rn6_v1_chr1_+_114046478_114046478	0.0341581	Hoxa2	ENSRNOT00000032254|Siglech|ENSRNOG00000021499|sialic acid binding Ig-like lectin H [Source:RGD Symbol%3BAcc:1310401]
rn6_v1_chr9_-_38196273_38196273	0.0339346	Hoxa2	ENSRNOT00000044452|Dst|ENSRNOG00000012207|dystonin [Source:RGD Symbol%3BAcc:1306566]
rn6_v1_chr4_+_70828894_70828894	0.033928	Hoxa2	ENSRNOT00000064892|Trbc2|ENSRNOG00000014312|T cell receptor beta%2C constant 2 [Source:MGI Symbol%3BAcc:MGI:4835227]
rn6_v1_chr10_-_17415251_17415251	0.033807	Hoxa2	ENSRNOT00000005509|Efcab9|ENSRNOG00000004142|EF-hand calcium binding domain 9 [Source:RGD Symbol%3BAcc:1588807]
rn6_v1_chr12_-_38869346_38869346	0.0335804	Hoxa2	ENSRNOT00000001807|Setd1b|ENSRNOG00000001337|SET domain containing 1B [Source:MGI Symbol%3BAcc:MGI:2652820]
rn6_v1_chr9_-_30844199_30844199	0.0335226	Hoxa2	ENSRNOT00000017169|Col19a1|ENSRNOG00000012759|collagen type XIX alpha 1 chain [Source:RGD Symbol%3BAcc:1308920]
rn6_v1_chr2_+_92573004_92573004	0.0333371	Hoxa2	ENSRNOT00000065774|tGap1|ENSRNOG00000022511|GTPase activating protein testicular GAP1 [Source:RGD Symbol%3BAcc:1359558]
rn6_v1_chr3_+_177164359_177164359	0.033148	Hoxa2	ENSRNOT00000066837|RGD1561282|ENSRNOG00000043071|RGD1561282 [Source:RGD Symbol%3BAcc:1561282]
rn6_v1_chr2_+_252090669_252090669	0.0329118	Hoxa2	ENSRNOT00000020656|Lpar3|ENSRNOG00000015260|lysophosphatidic acid receptor 3 [Source:RGD Symbol%3BAcc:620565]
rn6_v1_chr4_-_147505838_147505838	0.0328631	Hoxa2	ENSRNOT00000086570|Mkrn2os|ENSRNOG00000052003|MKRN2 opposite strand [Source:RGD Symbol%3BAcc:2320714]
rn6_v1_chr17_+_5382034_5382034	0.0324206	Hoxa2	ENSRNOT00000037597|Golm1|ENSRNOG00000018400|golgi membrane protein 1 [Source:RGD Symbol%3BAcc:1589384]
rn6_v1_chr4_-_159192526_159192526	0.0320396	Hoxa2	ENSRNOT00000026731|Kcna1|ENSRNOG00000019750|potassium voltage-gated channel subfamily A member 1 [Source:RGD Symbol%3BAcc:2949]
rn6_v1_chrX_+_35869538_35869538	0.0317794	Hoxa2	ENSRNOT00000058947|Ppef1|ENSRNOG00000027331|protein phosphatase with EF-hand domain 1 [Source:RGD Symbol%3BAcc:1562772]
rn6_v1_chr14_+_3506339_3506339	0.0316683	Hoxa2	ENSRNOT00000002867|Tgfbr3|ENSRNOG00000002093|transforming growth factor beta receptor 3 [Source:RGD Symbol%3BAcc:61821]
rn6_v1_chr13_-_26811904_26811904	0.0315338	Hoxa2	ENSRNOT00000090097|Kdsr|ENSRNOG00000002781|3-ketodihydrosphingosine reductase [Source:RGD Symbol%3BAcc:1307775]
rn6_v1_chr8_+_58431407_58431407	0.031487	Hoxa2	ENSRNOT00000011974|Sln|ENSRNOG00000009047|sarcolipin [Source:RGD Symbol%3BAcc:1305224]
rn6_v1_chr3_+_7279340_7279340	0.0314714	Hoxa2	ENSRNOT00000017029|Ak8|ENSRNOG00000012761|adenylate kinase 8 [Source:RGD Symbol%3BAcc:1303144]
rn6_v1_chr1_+_101161252_101161375	0.0314643	Hoxa2	ENSRNOT00000028064|Slc17a7|ENSRNOG00000020650|solute carrier family 17 member 7 [Source:RGD Symbol%3BAcc:620101]	ENSRNOT00000064184|Slc17a7|ENSRNOG00000020650|solute carrier family 17 member 7 [Source:RGD Symbol%3BAcc:620101]
rn6_v1_chr1_+_219964429_219964429	0.0314366	Hoxa2	ENSRNOT00000088288|Sptbn2|ENSRNOG00000058842|spectrin%2C beta%2C non-erythrocytic 2 [Source:RGD Symbol%3BAcc:3751]
rn6_v1_chr14_+_19319299_19319299	0.0314313	Hoxa2	ENSRNOT00000086542|Ankrd17|ENSRNOG00000002940|ankyrin repeat domain 17 [Source:RGD Symbol%3BAcc:1562348]
rn6_v1_chr4_+_7144669_7144674	0.0311215	Hoxa2	ENSRNOT00000077682|Iqca1l|ENSRNOG00000011092|IQ motif containing with AAA domain 1 like [Source:RGD Symbol%3BAcc:1564789]	ENSRNOT00000014998|Iqca1l|ENSRNOG00000011092|IQ motif containing with AAA domain 1 like [Source:RGD Symbol%3BAcc:1564789]
rn6_v1_chr10_+_86340940_86340940	0.0310519	Hoxa2	ENSRNOT00000073486|Pnmt|ENSRNOG00000046057|phenylethanolamine-N-methyltransferase [Source:RGD Symbol%3BAcc:3361]
rn6_v1_chr3_-_162035614_162035614	0.0310352	Hoxa2	ENSRNOT00000047890|Zfp663|ENSRNOG00000031478|zinc finger protein 663 [Source:RGD Symbol%3BAcc:2318893]
rn6_v1_chr1_-_226887156_226887156	0.0305027	Hoxa2	ENSRNOT00000054809|Cd6|ENSRNOG00000020884|Cd6 molecule [Source:RGD Symbol%3BAcc:2312]	ENSRNOT00000028347|Cd6|ENSRNOG00000020884|Cd6 molecule [Source:RGD Symbol%3BAcc:2312]
rn6_v1_chr7_-_117268300_117268300	0.0304641	Hoxa2	ENSRNOT00000091840|Plec|ENSRNOG00000023781|plectin [Source:RGD Symbol%3BAcc:621649]
rn6_v1_chrX_+_40258493_40258493	0.0302201	Hoxa2	ENSRNOT00000033010|Mbtps2|ENSRNOG00000007644|membrane-bound transcription factor peptidase%2C site 2 [Source:RGD Symbol%3BAcc:1566171]
rn6_v1_chr4_-_161278293_161278293	0.0301568	Hoxa2	ENSRNOT00000050332|AABR07062108.1|ENSRNOG00000031180|
rn6_v1_chr18_+_57727187_57727187	0.0300669	Hoxa2	ENSRNOT00000065483|Htr4|ENSRNOG00000019134|5-hydroxytryptamine receptor 4 [Source:RGD Symbol%3BAcc:2850]	ENSRNOT00000025871|Htr4|ENSRNOG00000019134|5-hydroxytryptamine receptor 4 [Source:RGD Symbol%3BAcc:2850]
rn6_v1_chr15_+_344685_344710	0.0300593	Hoxa2	ENSRNOT00000065542|Kcnma1|ENSRNOG00000005985|potassium calcium-activated channel subfamily M alpha 1 [Source:RGD Symbol%3BAcc:620715]	ENSRNOT00000066928|Kcnma1|ENSRNOG00000005985|potassium calcium-activated channel subfamily M alpha 1 [Source:RGD Symbol%3BAcc:620715]
rn6_v1_chr14_+_2050483_2050483	0.0300278	Hoxa2	ENSRNOT00000000047|Slc26a1|ENSRNOG00000000041|solute carrier family 26 member 1 [Source:RGD Symbol%3BAcc:620136]
rn6_v1_chr13_-_42263024_42263024	0.0299421	Hoxa2	ENSRNOT00000004741|Lypd1|ENSRNOG00000003453|Ly6/Plaur domain containing 1 [Source:RGD Symbol%3BAcc:1549754]
rn6_v1_chr1_+_257615088_257615088	0.0299079	Hoxa2	ENSRNOT00000083183|LOC100911660|ENSRNOG00000047692|lymphocyte-specific helicase-like [Source:RGD Symbol%3BAcc:6491699]
rn6_v1_chr2_+_209661244_209661244	0.0298087	Hoxa2	ENSRNOT00000091973|AABR07012826.1|ENSRNOG00000055404|
rn6_v1_chr10_-_87521514_87521572	0.0294231	Hoxa2	ENSRNOT00000084668|Krtap2-4l|ENSRNOG00000056967|keratin associated protein 2-4-like [Source:RGD Symbol%3BAcc:1595488]	ENSRNOT00000071705|Krtap2-4l|ENSRNOG00000056967|keratin associated protein 2-4-like [Source:RGD Symbol%3BAcc:1595488]
rn6_v1_chr9_+_82632230_82632230	0.0293586	Hoxa2	ENSRNOT00000085165|Gmppa|ENSRNOG00000019946|GDP-mannose pyrophosphorylase A [Source:RGD Symbol%3BAcc:1560644]
rn6_v1_chr10_+_68173369_68173369	0.0290552	Hoxa2	ENSRNOT00000037072|Tmem98|ENSRNOG00000021316|transmembrane protein 98 [Source:RGD Symbol%3BAcc:1359736]
rn6_v1_chr19_+_34616768_34616768	0.0286221	Hoxa2	ENSRNOT00000051194|Rps27a-ps6|ENSRNOG00000029317|ribosomal protein S27a%2C pseudogene 6 [Source:RGD Symbol%3BAcc:1588826]
rn6_v1_chr9_+_23298307_23298307	0.0285231	Hoxa2	ENSRNOT00000071724|LOC102548541|ENSRNOG00000049135|uncharacterized LOC102548541 [Source:RGD Symbol%3BAcc:7527318]
rn6_v1_chr2_+_153830586_153830586	0.0282797	Hoxa2	ENSRNOT00000042576|Mme|ENSRNOG00000009514|membrane metallo-endopeptidase [Source:RGD Symbol%3BAcc:3098]
rn6_v1_chr17_+_20619324_20619324	0.028269	Hoxa2	ENSRNOT00000079788|AABR07027235.1|ENSRNOG00000051931|
rn6_v1_chr19_+_46455761_46455859	0.0277928	Hoxa2	ENSRNOT00000034012|Nudt7|ENSRNOG00000011976|nudix hydrolase 7 [Source:RGD Symbol%3BAcc:1306719]	ENSRNOT00000093392|Nudt7|ENSRNOG00000011976|nudix hydrolase 7 [Source:RGD Symbol%3BAcc:1306719]
rn6_v1_chr13_+_48644604_48644668	0.0277171	Hoxa2	ENSRNOT00000084259|Rab29|ENSRNOG00000049641|RAB29%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620892]	ENSRNOT00000073669|Rab29|ENSRNOG00000049641|RAB29%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620892]
rn6_v1_chr4_+_173732248_173732248	0.0275603	Hoxa2	ENSRNOT00000041499|Pik3c2g|ENSRNOG00000034228|phosphatidylinositol-4-phosphate 3-kinase%2C catalytic subunit type 2 gamma [Source:RGD Symbol%3BAcc:620231]
rn6_v1_chr2_-_39007976_39007976	0.0274213	Hoxa2	ENSRNOT00000064292|Zswim6|ENSRNOG00000014528|zinc finger%2C SWIM-type containing 6 [Source:RGD Symbol%3BAcc:1306624]
rn6_v1_chr8_-_71728654_71728685	0.0273811	Hoxa2	ENSRNOT00000031207|Snx22|ENSRNOG00000022852|sorting nexin 22 [Source:RGD Symbol%3BAcc:1305042]	ENSRNOT00000091751|Snx22|ENSRNOG00000022852|sorting nexin 22 [Source:RGD Symbol%3BAcc:1305042]
rn6_v1_chr4_+_155437675_155437675	0.0273515	Hoxa2	ENSRNOT00000031353|Dppa3|ENSRNOG00000022950|developmental pluripotency-associated 3 [Source:RGD Symbol%3BAcc:1310932]
rn6_v1_chr1_+_266143818_266143818	0.0272781	Hoxa2	ENSRNOT00000026987|Sufu|ENSRNOG00000019807|SUFU negative regulator of hedgehog signaling [Source:RGD Symbol%3BAcc:1559462]
rn6_v1_chr20_+_50172618_50172618	0.0271063	Hoxa2	ENSRNOT00000091456|Prep|ENSRNOG00000051061|prolyl endopeptidase [Source:RGD Symbol%3BAcc:620841]
rn6_v1_chr13_+_77485113_77485113	0.0270161	Hoxa2	ENSRNOT00000080254|Tnr|ENSRNOG00000002468|tenascin R [Source:RGD Symbol%3BAcc:3886]
rn6_v1_chr4_-_62860446_62860446	0.0269358	Hoxa2	ENSRNOT00000015752|Fam180a|ENSRNOG00000011750|family with sequence similarity 180%2C member A [Source:RGD Symbol%3BAcc:1308013]
rn6_v1_chr9_-_13311924_13311924	0.0267118	Hoxa2	ENSRNOT00000015584|Kif6|ENSRNOG00000011453|kinesin family member 6 [Source:RGD Symbol%3BAcc:621070]
rn6_v1_chr1_+_178039063_178039063	0.0266865	Hoxa2	ENSRNOT00000046313|Arntl|ENSRNOG00000014448|aryl hydrocarbon receptor nuclear translocator-like [Source:RGD Symbol%3BAcc:62003]
rn6_v1_chr2_-_30458542_30458542	0.0266595	Hoxa2	ENSRNOT00000072926|Naip6|ENSRNOG00000033693|NLR family%2C apoptosis inhibitory protein 6 [Source:RGD Symbol%3BAcc:621281]
rn6_v1_chr4_-_150485781_150485781	0.026639	Hoxa2	ENSRNOT00000008763|Zfp248|ENSRNOG00000037251|zinc finger protein 248 [Source:RGD Symbol%3BAcc:1561270]
rn6_v1_chr10_-_85974644_85974651	0.0266282	Hoxa2	ENSRNOT00000006098|Cacnb1|ENSRNOG00000004518|calcium voltage-gated channel auxiliary subunit beta 1 [Source:RGD Symbol%3BAcc:68382]	ENSRNOT00000082974|Cacnb1|ENSRNOG00000004518|calcium voltage-gated channel auxiliary subunit beta 1 [Source:RGD Symbol%3BAcc:68382]
rn6_v1_chr6_-_144123596_144123729	0.0264616	Hoxa2	ENSRNOT00000006144|Wdr60|ENSRNOG00000004520|WD repeat domain 60 [Source:RGD Symbol%3BAcc:1306493]	ENSRNOT00000087845|Wdr60|ENSRNOG00000004520|WD repeat domain 60 [Source:RGD Symbol%3BAcc:1306493]
rn6_v1_chr5_+_48006823_48006823	0.0263636	Hoxa2	ENSRNOT00000076388|Mdn1|ENSRNOG00000047513|midasin AAA ATPase 1 [Source:RGD Symbol%3BAcc:1306394]
rn6_v1_chr16_-_20994379_20994379	0.0262987	Hoxa2	ENSRNOT00000027639|Tmem161a|ENSRNOG00000020390|transmembrane protein 161A [Source:RGD Symbol%3BAcc:1307703]
rn6_v1_chr7_+_27248115_27248115	0.0262353	Hoxa2	ENSRNOT00000031946|LOC362863|ENSRNOG00000026807|first gene upstream of Nt5dc3 [Source:RGD Symbol%3BAcc:1302940]	ENSRNOT00000059545|LOC362863|ENSRNOG00000026807|first gene upstream of Nt5dc3 [Source:RGD Symbol%3BAcc:1302940]
rn6_v1_chr11_-_14160697_14160697	0.0260399	Hoxa2	ENSRNOT00000081096|Hspa13|ENSRNOG00000060979|heat shock protein 70 family%2C member 13 [Source:RGD Symbol%3BAcc:3775]
rn6_v1_chr10_+_59566223_59566268	0.025538	Hoxa2	ENSRNOT00000024068|P2rx1|ENSRNOG00000017606|purinergic receptor P2X 1 [Source:RGD Symbol%3BAcc:3240]	ENSRNOT00000088245|P2rx1|ENSRNOG00000017606|purinergic receptor P2X 1 [Source:RGD Symbol%3BAcc:3240]
rn6_v1_chr17_+_45508683_45508683	0.0255259	Hoxa2	ENSRNOT00000084180|Gpx5|ENSRNOG00000057180|glutathione peroxidase 5 [Source:RGD Symbol%3BAcc:69227]
rn6_v1_chr20_-_20680675_20680675	0.0254058	Hoxa2	ENSRNOT00000087085|Rhobtb1|ENSRNOG00000000633|Rho-related BTB domain containing 1 [Source:RGD Symbol%3BAcc:1306871]
rn6_v1_chr17_-_30714410_30714495	0.0253663	Hoxa2	ENSRNOT00000022902|Prpf4b|ENSRNOG00000016705|pre-mRNA processing factor 4B [Source:RGD Symbol%3BAcc:1307784]	ENSRNOT00000081993|Prpf4b|ENSRNOG00000016705|pre-mRNA processing factor 4B [Source:RGD Symbol%3BAcc:1307784]
rn6_v1_chrX_+_123751089_123751089	0.0252156	Hoxa2	ENSRNOT00000092384|Nkap|ENSRNOG00000053813|NFKB activating protein [Source:RGD Symbol%3BAcc:1565955]
rn6_v1_chr11_+_43521054_43521054	0.0251178	Hoxa2	ENSRNOT00000041679|Olr1551|ENSRNOG00000046134|olfactory receptor 1551 [Source:RGD Symbol%3BAcc:1333073]
rn6_v1_chrX_+_31984612_31984612	0.0248992	Hoxa2	ENSRNOT00000005181|Bmx|ENSRNOG00000003705|BMX non-receptor tyrosine kinase [Source:RGD Symbol%3BAcc:1565643]
rn6_v1_chr5_+_4373626_4373626	0.0248842	Hoxa2	ENSRNOT00000064946|Eya1|ENSRNOG00000007590|EYA transcriptional coactivator and phosphatase 1 [Source:RGD Symbol%3BAcc:1584849]
rn6_v1_chr6_+_102311116_102311116	0.0248817	Hoxa2	ENSRNOT00000083433|Arg2|ENSRNOG00000053811|arginase 2 [Source:RGD Symbol%3BAcc:2151]
rn6_v1_chr8_+_132828091_132828091	0.0246606	Hoxa2	ENSRNOT00000008269|Ccr9|ENSRNOG00000006311|C-C motif chemokine receptor 9 [Source:RGD Symbol%3BAcc:628750]
rn6_v1_chr12_-_38525432_38525432	0.0246106	Hoxa2	ENSRNOT00000011240|Lrrc43|ENSRNOG00000008470|leucine rich repeat containing 43 [Source:RGD Symbol%3BAcc:1561461]
rn6_v1_chr13_-_100405339_100405339	0.0245591	Hoxa2	ENSRNOT00000039974|Enah|ENSRNOG00000031934|enabled homolog (Drosophila) [Source:RGD Symbol%3BAcc:1307666]
rn6_v1_chr17_+_18358712_18358712	0.0245028	Hoxa2	ENSRNOT00000001979|Nup153|ENSRNOG00000001456|nucleoporin 153 [Source:RGD Symbol%3BAcc:3216]
rn6_v1_chr1_-_171979757_171979757	0.0244963	Hoxa2	ENSRNOT00000079844|Cyb5r2|ENSRNOG00000019751|cytochrome b5 reductase 2 [Source:RGD Symbol%3BAcc:1308421]
rn6_v1_chr17_+_35435079_35435079	0.0243865	Hoxa2	ENSRNOT00000074800|Exoc2|ENSRNOG00000045721|exocyst complex component 2 [Source:RGD Symbol%3BAcc:619961]
rn6_v1_chr3_+_9792899_9792899	0.0241335	Hoxa2	ENSRNOT00000066618|Tor1b|ENSRNOG00000006435|torsin family 1%2C member B [Source:RGD Symbol%3BAcc:1308431]
rn6_v1_chr6_-_9459188_9459188	0.0240607	Hoxa2	ENSRNOT00000019894|Srbd1|ENSRNOG00000014720|S1 RNA binding domain 1 [Source:RGD Symbol%3BAcc:1562788]
rn6_v1_chr5_-_128839433_128839433	0.0239887	Hoxa2	ENSRNOT00000065280|Osbpl9|ENSRNOG00000033593|oxysterol binding protein-like 9 [Source:RGD Symbol%3BAcc:1311508]
rn6_v1_chrX_-_112473822_112473822	0.0239845	Hoxa2	ENSRNOT00000079180|Col4a6|ENSRNOG00000056772|collagen type IV alpha 6 chain [Source:RGD Symbol%3BAcc:1589724]
rn6_v1_chr7_-_116424570_116424570	0.0237437	Hoxa2	ENSRNOT00000009395|Ly6i|ENSRNOG00000007137|lymphocyte antigen 6 complex%2C locus I [Source:RGD Symbol%3BAcc:628818]
rn6_v1_chr9_+_37462693_37462693	0.0235137	Hoxa2	ENSRNOT00000016316|Lgsn|ENSRNOG00000012205|lengsin%2C lens protein with glutamine synthetase domain [Source:RGD Symbol%3BAcc:727925]
rn6_v1_chr4_-_145678066_145678066	0.0233023	Hoxa2	ENSRNOT00000014103|Ghrl|ENSRNOG00000010349|ghrelin and obestatin prepropeptide [Source:RGD Symbol%3BAcc:632283]
rn6_v1_chr16_+_8207223_8207223	0.0232963	Hoxa2	ENSRNOT00000026751|Oxnad1|ENSRNOG00000019760|oxidoreductase NAD-binding domain containing 1 [Source:RGD Symbol%3BAcc:1311534]
rn6_v1_chr6_+_64252020_64252111	0.0232294	Hoxa2	ENSRNOT00000047296|Pnpla8|ENSRNOG00000039091|patatin-like phospholipase domain containing 8 [Source:RGD Symbol%3BAcc:1311444]	ENSRNOT00000082105|Pnpla8|ENSRNOG00000039091|patatin-like phospholipase domain containing 8 [Source:RGD Symbol%3BAcc:1311444]
rn6_v1_chr1_+_114453275_114453275	0.0231398	Hoxa2	ENSRNOT00000019245|Herc2|ENSRNOG00000013718|HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:RGD Symbol%3BAcc:1307989]
rn6_v1_chr13_-_108178609_108178609	0.0230948	Hoxa2	ENSRNOT00000004525|Cenpf|ENSRNOG00000003388|centromere protein F [Source:RGD Symbol%3BAcc:628667]
rn6_v1_chr17_-_42276797_42276797	0.0229898	Hoxa2	ENSRNOT00000083996|LOC100911664|ENSRNOG00000018456|uncharacterized LOC100911664 [Source:RGD Symbol%3BAcc:6491729]
rn6_v1_chr6_+_96171756_96171756	0.0228234	Hoxa2	ENSRNOT00000029328|Slc38a6|ENSRNOG00000022622|solute carrier family 38%2C member 6 [Source:RGD Symbol%3BAcc:1310330]
rn6_v1_chr16_-_14210449_14210449	0.0227974	Hoxa2	ENSRNOT00000016494|Ccser2|ENSRNOG00000022781|coiled-coil serine-rich protein 2 [Source:RGD Symbol%3BAcc:1304626]
rn6_v1_chrX_-_81866370_81866370	0.0227583	Hoxa2	ENSRNOT00000042570|AABR07039651.1|ENSRNOG00000045666|
rn6_v1_chr2_-_88660449_88660449	0.0226148	Hoxa2	ENSRNOT00000051741|Slc7a12|ENSRNOG00000033830|solute carrier family 7 (cationic amino acid transporter%2C y+ system)%2C member 12 [Source:RGD Symbol%3BAcc:1309208]
rn6_v1_chr12_-_11780078_11780078	0.0225644	Hoxa2	ENSRNOT00000076796|Zfp498|ENSRNOG00000042213|zinc finger protein 498 [Source:RGD Symbol%3BAcc:1308619]
rn6_v1_chr18_+_79773608_79773608	0.0223685	Hoxa2	ENSRNOT00000088484|Zfp516|ENSRNOG00000016258|zinc finger protein 516 [Source:RGD Symbol%3BAcc:1306817]
rn6_v1_chr14_+_37919233_37919233	0.0223259	Hoxa2	ENSRNOT00000003125|Tec|ENSRNOG00000002278|tec protein tyrosine kinase [Source:RGD Symbol%3BAcc:620973]
rn6_v1_chr19_+_37852833_37852833	0.0220193	Hoxa2	ENSRNOT00000006345|Nrn1l|ENSRNOG00000024025|neuritin 1-like [Source:RGD Symbol%3BAcc:2301010]
rn6_v1_chr3_-_113231790_113231790	0.0219411	Hoxa2	ENSRNOT00000019025|Tp53bp1|ENSRNOG00000013837|tumor protein p53 binding protein 1 [Source:RGD Symbol%3BAcc:1308039]
rn6_v1_chr11_+_80358211_80358211	0.0218774	Hoxa2	ENSRNOT00000002519|Sst|ENSRNOG00000001837|somatostatin [Source:RGD Symbol%3BAcc:3761]
rn6_v1_chr9_+_82632384_82632384	0.0217233	Hoxa2	ENSRNOT00000027064|Gmppa|ENSRNOG00000019946|GDP-mannose pyrophosphorylase A [Source:RGD Symbol%3BAcc:1560644]
rn6_v1_chr2_-_120316600_120316600	0.021409	Hoxa2	ENSRNOT00000084521|Ccdc39|ENSRNOG00000011440|coiled-coil domain containing 39 [Source:RGD Symbol%3BAcc:1306277]
rn6_v1_chr1_-_67134827_67134827	0.0209236	Hoxa2	ENSRNOT00000045214|Vom1r45|ENSRNOG00000028882|vomeronasal 1 receptor 45 [Source:RGD Symbol%3BAcc:1359121]
rn6_v1_chr5_-_159962218_159962218	0.0208791	Hoxa2	ENSRNOT00000050729|Clcnkb|ENSRNOG00000009897|chloride voltage-gated channel Kb [Source:RGD Symbol%3BAcc:628639]
rn6_v1_chr12_-_43576754_43576804	0.0208152	Hoxa2	ENSRNOT00000042331|Med13l|ENSRNOG00000001120|mediator complex subunit 13-like [Source:RGD Symbol%3BAcc:1305884]	ENSRNOT00000081780|Med13l|ENSRNOG00000001120|mediator complex subunit 13-like [Source:RGD Symbol%3BAcc:1305884]
rn6_v1_chr10_+_46092754_46092754	0.0207868	Hoxa2	ENSRNOT00000080666|Mprip|ENSRNOG00000003226|myosin phosphatase Rho interacting protein [Source:RGD Symbol%3BAcc:619947]
rn6_v1_chr2_-_2814690_2814690	0.0205717	Hoxa2	ENSRNOT00000029265|Gpr150|ENSRNOG00000026944|G protein-coupled receptor 150 [Source:RGD Symbol%3BAcc:1564729]
rn6_v1_chrX_-_115175299_115175299	0.0205513	Hoxa2	ENSRNOT00000074322|Dcx|ENSRNOG00000047712|doublecortin [Source:RGD Symbol%3BAcc:620670]
rn6_v1_chr1_+_225195802_225195802	0.0205008	Hoxa2	ENSRNOT00000088387|Ahnak|ENSRNOG00000057569|AHNAK nucleoprotein [Source:RGD Symbol%3BAcc:619779]
rn6_v1_chr2_-_247446882_247446882	0.0204514	Hoxa2	ENSRNOT00000021963|Bmpr1b|ENSRNOG00000016289|bone morphogenetic protein receptor type 1B [Source:RGD Symbol%3BAcc:1595863]
rn6_v1_chr14_-_45797887_45797887	0.0204093	Hoxa2	ENSRNOT00000029209|Tbc1d1|ENSRNOG00000002180|TBC1 domain family member 1 [Source:RGD Symbol%3BAcc:1304562]
rn6_v1_chr4_+_34237762_34237762	0.0203122	Hoxa2	ENSRNOT00000084163|Mios|ENSRNOG00000007924|meiosis regulator for oocyte development [Source:RGD Symbol%3BAcc:1308432]
rn6_v1_chr2_+_211381036_211381036	0.0202565	Hoxa2	ENSRNOT00000055862|Wdr47|ENSRNOG00000020330|WD repeat domain 47 [Source:RGD Symbol%3BAcc:1309181]
rn6_v1_chr12_+_49419582_49419582	0.0202086	Hoxa2	ENSRNOT00000082998|RGD1306556|ENSRNOG00000052424|similar to hypothetical protein A530094D01 [Source:RGD Symbol%3BAcc:1306556]
rn6_v1_chr18_+_15883182_15883182	0.0201692	Hoxa2	ENSRNOT00000088353|Zfp35|ENSRNOG00000049137|zinc finger protein 35 [Source:RGD Symbol%3BAcc:1312031]	ENSRNOT00000076137|Zfp35|ENSRNOG00000049137|zinc finger protein 35 [Source:RGD Symbol%3BAcc:1312031]
rn6_v1_chr18_+_30398113_30398113	0.0201138	Hoxa2	ENSRNOT00000027206|Pcdhb5|ENSRNOG00000020084|protocadherin beta 5 [Source:RGD Symbol%3BAcc:1304665]
rn6_v1_chr20_-_4817146_4817146	0.020106	Hoxa2	ENSRNOT00000080174|Ddx39b|ENSRNOG00000000841|DExD-box helicase 39B [Source:RGD Symbol%3BAcc:70923]
rn6_v1_chr17_-_71897972_71897972	0.020043	Hoxa2	ENSRNOT00000065942|Sfmbt2|ENSRNOG00000029235|Scm-like with four mbt domains 2 [Source:RGD Symbol%3BAcc:1305027]
rn6_v1_chr14_+_22724399_22724399	0.0197612	Hoxa2	ENSRNOT00000002724|Ugt2b10|ENSRNOG00000001990|UDP glucuronosyltransferase 2 family%2C polypeptide B10 [Source:RGD Symbol%3BAcc:1309989]
rn6_v1_chr9_-_91100482_91100482	0.019594	Hoxa2	ENSRNOT00000064642|LOC100911860|ENSRNOG00000049962|ubiquitin carboxyl-terminal hydrolase 40-like [Source:RGD Symbol%3BAcc:6490066]
rn6_v1_chr10_-_43512287_43512287	0.0195458	Hoxa2	ENSRNOT00000036481|Faxdc2|ENSRNOG00000027259|fatty acid hydroxylase domain containing 2 [Source:RGD Symbol%3BAcc:1586284]
rn6_v1_chr1_+_69615434_69615434	0.0194033	Hoxa2	ENSRNOT00000020751|Zfp418|ENSRNOG00000015271|zinc finger protein 418 [Source:RGD Symbol%3BAcc:1311663]
rn6_v1_chr6_-_49089855_49089855	0.0193968	Hoxa2	ENSRNOT00000006526|Tpo|ENSRNOG00000004646|thyroid peroxidase [Source:RGD Symbol%3BAcc:3900]
rn6_v1_chr2_+_119112513_119112513	0.0192959	Hoxa2	ENSRNOT00000015460|Actl6a|ENSRNOG00000011553|actin-like 6A [Source:RGD Symbol%3BAcc:1307747]
rn6_v1_chr11_+_57430166_57430166	0.0191832	Hoxa2	ENSRNOT00000093201|Phldb2|ENSRNOG00000002171|pleckstrin homology-like domain%2C family B%2C member 2 [Source:RGD Symbol%3BAcc:1591402]
rn6_v1_chr10_-_107324355_107324355	0.0191051	Hoxa2	ENSRNOT00000064450|Usp36|ENSRNOG00000028255|ubiquitin specific peptidase 36 [Source:RGD Symbol%3BAcc:1309937]
rn6_v1_chr2_+_189609800_189609800	0.0186303	Hoxa2	ENSRNOT00000089016|Slc39a1|ENSRNOG00000059463|solute carrier family 39 member 1 [Source:RGD Symbol%3BAcc:1305241]
rn6_v1_chr3_-_107760550_107760589	0.01857	Hoxa2	ENSRNOT00000077091|Meis2|ENSRNOG00000004730|Meis homeobox 2 [Source:RGD Symbol%3BAcc:1305198]	ENSRNOT00000051638|Meis2|ENSRNOG00000004730|Meis homeobox 2 [Source:RGD Symbol%3BAcc:1305198]
rn6_v1_chr1_-_99632845_99632845	0.0185441	Hoxa2	ENSRNOT00000049123|LOC103691107|ENSRNOG00000030089|NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene [Source:RGD Symbol%3BAcc:9202400]
rn6_v1_chr6_-_26445787_26445787	0.0185304	Hoxa2	ENSRNOT00000084242|LOC103692570|ENSRNOG00000054165|dihydropyrimidinase-related protein 5-like [Source:RGD Symbol%3BAcc:9135001]
rn6_v1_chr5_+_124021366_124021366	0.0183928	Hoxa2	ENSRNOT00000009977|Dab1|ENSRNOG00000007410|DAB1%2C reelin adaptor protein [Source:RGD Symbol%3BAcc:628770]
rn6_v1_chr1_+_199323628_199323628	0.0183057	Hoxa2	ENSRNOT00000036187|Zfp646|ENSRNOG00000026115|zinc finger protein 646 [Source:RGD Symbol%3BAcc:1561579]
rn6_v1_chr4_-_73174179_73174179	0.0182782	Hoxa2	ENSRNOT00000048203|Tpk1|ENSRNOG00000029922|thiamin pyrophosphokinase 1 [Source:RGD Symbol%3BAcc:1589408]
rn6_v1_chr2_-_181531978_181531978	0.018266	Hoxa2	ENSRNOT00000072029|Npy2r|ENSRNOG00000049213|neuropeptide Y receptor Y2 [Source:RGD Symbol%3BAcc:620475]
rn6_v1_chr16_-_755990_755990	0.0182626	Hoxa2	ENSRNOT00000013501|Polr3a|ENSRNOG00000010008|RNA polymerase III subunit A [Source:RGD Symbol%3BAcc:1305574]
rn6_v1_chr4_+_150199627_150199627	0.0180859	Hoxa2	ENSRNOT00000052259|AABR07061871.1|ENSRNOG00000030647|
rn6_v1_chr2_-_236431596_236431683	0.0179752	Hoxa2	ENSRNOT00000055570|Cyp2u1|ENSRNOG00000011053|cytochrome P450%2C family 2%2C subfamily u%2C polypeptide 1 [Source:RGD Symbol%3BAcc:1309433]	ENSRNOT00000089674|Cyp2u1|ENSRNOG00000011053|cytochrome P450%2C family 2%2C subfamily u%2C polypeptide 1 [Source:RGD Symbol%3BAcc:1309433]
rn6_v1_chr3_-_152159749_152159749	0.0179153	Hoxa2	ENSRNOT00000067490|Cpne1|ENSRNOG00000046990|copine 1 [Source:RGD Symbol%3BAcc:1311148]
rn6_v1_chr9_+_111028824_111028874	0.017717	Hoxa2	ENSRNOT00000041418|Pam|ENSRNOG00000033280|peptidylglycine alpha-amidating monooxygenase [Source:RGD Symbol%3BAcc:3252]	ENSRNOT00000056457|Pam|ENSRNOG00000033280|peptidylglycine alpha-amidating monooxygenase [Source:RGD Symbol%3BAcc:3252]
rn6_v1_chr5_-_166116516_166116516	0.0174378	Hoxa2	ENSRNOT00000079919|Kif1b|ENSRNOG00000057626|kinesin family member 1B [Source:RGD Symbol%3BAcc:621520]	ENSRNOT00000080888|Kif1b|ENSRNOG00000057626|kinesin family member 1B [Source:RGD Symbol%3BAcc:621520]
rn6_v1_chr18_+_65285318_65285318	0.0171218	Hoxa2	ENSRNOT00000020431|Tcf4|ENSRNOG00000012405|transcription factor 4 [Source:RGD Symbol%3BAcc:69271]
rn6_v1_chr1_-_81550598_81550598	0.0168944	Hoxa2	ENSRNOT00000051671|RGD1564380|ENSRNOG00000033358|similar to BC049730 protein [Source:RGD Symbol%3BAcc:1564380]
rn6_v1_chr2_+_188139730_188139778	0.0167875	Hoxa2	ENSRNOT00000056789|Gon4l|ENSRNOG00000020297|gon-4 like [Source:RGD Symbol%3BAcc:1564691]	ENSRNOT00000077698|Gon4l|ENSRNOG00000020297|gon-4 like [Source:RGD Symbol%3BAcc:1564691]
rn6_v1_chr10_+_103737162_103737162	0.0167664	Hoxa2	ENSRNOT00000055037|Tmem104|ENSRNOG00000025669|transmembrane protein 104 [Source:RGD Symbol%3BAcc:1307953]
rn6_v1_chr10_-_56368360_56368360	0.0167058	Hoxa2	ENSRNOT00000019674|Slc35g3|ENSRNOG00000014519|solute carrier family 35%2C member G3 [Source:RGD Symbol%3BAcc:1308025]
rn6_v1_chrX_-_156891038_156891038	0.0166534	Hoxa2	ENSRNOT00000091495|Avpr2|ENSRNOG00000059862|arginine vasopressin receptor 2 [Source:RGD Symbol%3BAcc:2186]
rn6_v1_chr10_-_103736973_103736973	0.0166512	Hoxa2	ENSRNOT00000004372|Nat9|ENSRNOG00000003264|N-acetyltransferase 9 [Source:RGD Symbol%3BAcc:1307096]
rn6_v1_chr6_+_113898420_113898420	0.0165068	Hoxa2	ENSRNOT00000064872|Nrxn3|ENSRNOG00000047574|neurexin 3 [Source:RGD Symbol%3BAcc:620212]
rn6_v1_chr10_+_55626741_55626741	0.0164927	Hoxa2	ENSRNOT00000008492|Aurkb|ENSRNOG00000005659|aurora kinase B [Source:RGD Symbol%3BAcc:621625]
rn6_v1_chr4_-_181348799_181348799	0.016472	Hoxa2	ENSRNOT00000033743|LOC690784|ENSRNOG00000026864|hypothetical protein LOC690783 [Source:RGD Symbol%3BAcc:1592184]
rn6_v1_chr1_-_102826965_102826965	0.0164203	Hoxa2	ENSRNOT00000078692|Saa4|ENSRNOG00000055531|serum amyloid A4 [Source:RGD Symbol%3BAcc:1307371]
rn6_v1_chr17_+_42133076_42133076	0.0164025	Hoxa2	ENSRNOT00000031384|Aldh5a1|ENSRNOG00000023538|aldehyde dehydrogenase 5 family%2C member A1 [Source:RGD Symbol%3BAcc:621422]
rn6_v1_chr13_+_34610684_34610689	0.016358	Hoxa2	ENSRNOT00000093019|Tfcp2l1|ENSRNOG00000002414|transcription factor CP2-like 1 [Source:RGD Symbol%3BAcc:1305456]	ENSRNOT00000003280|Tfcp2l1|ENSRNOG00000002414|transcription factor CP2-like 1 [Source:RGD Symbol%3BAcc:1305456]
rn6_v1_chr4_+_146598413_146598413	0.0160617	Hoxa2	ENSRNOT00000067532|Atg7|ENSRNOG00000007486|autophagy related 7 [Source:RGD Symbol%3BAcc:1304817]
rn6_v1_chr12_-_5685448_5685448	0.0160061	Hoxa2	ENSRNOT00000077167|Fry|ENSRNOG00000000894|FRY microtubule binding protein [Source:RGD Symbol%3BAcc:1307034]
rn6_v1_chr12_-_52558606_52558606	0.0159155	Hoxa2	ENSRNOT00000056656|Golga3|ENSRNOG00000037437|golgin A3 [Source:RGD Symbol%3BAcc:1305262]
rn6_v1_chr6_-_103187275_103187275	0.0158203	Hoxa2	ENSRNOT00000083272|LOC100359616|ENSRNOG00000055777|ribosomal protein L36-like [Source:RGD Symbol%3BAcc:2325111]
rn6_v1_chr3_+_80670140_80670140	0.0157368	Hoxa2	ENSRNOT00000085614|Ambra1|ENSRNOG00000017422|autophagy and beclin 1 regulator 1 [Source:RGD Symbol%3BAcc:621330]
rn6_v1_chr9_-_4879755_4879755	0.0157281	Hoxa2	ENSRNOT00000047615|RGD1559960|ENSRNOG00000040195|similar to Sulfotransferase K1 (rSULT1C2) [Source:RGD Symbol%3BAcc:1559960]
rn6_v1_chr18_+_55505993_55505993	0.0157112	Hoxa2	ENSRNOT00000043736|RGD1309362|ENSRNOG00000038960|similar to interferon-inducible GTPase [Source:RGD Symbol%3BAcc:1309362]
rn6_v1_chrX_+_124894466_124894466	0.0156944	Hoxa2	ENSRNOT00000080894|Mcts1|ENSRNOG00000002563|MCTS1%2C re-initiation and release factor [Source:RGD Symbol%3BAcc:1566390]
rn6_v1_chr16_-_28166296_28166296	0.0156888	Hoxa2	ENSRNOT00000049187|LOC364556|ENSRNOG00000032995|similar to Ab1-351 [Source:RGD Symbol%3BAcc:1359166]
rn6_v1_chr1_-_174289647_174289647	0.0155509	Hoxa2	ENSRNOT00000064902|St5|ENSRNOG00000013934|suppression of tumorigenicity 5 [Source:RGD Symbol%3BAcc:1308995]
rn6_v1_chrX_+_9956370_9956370	0.015515	Hoxa2	ENSRNOT00000082316|LOC100910506|ENSRNOG00000060946|peripheral plasma membrane protein CASK-like [Source:RGD Symbol%3BAcc:6498449]
rn6_v1_chr14_-_114583122_114583122	0.0154862	Hoxa2	ENSRNOT00000084595|Sptbn1|ENSRNOG00000005434|spectrin%2C beta%2C non-erythrocytic 1 [Source:RGD Symbol%3BAcc:727922]
rn6_v1_chr12_+_17277635_17277635	0.0154272	Hoxa2	ENSRNOT00000001734|LOC498154|ENSRNOG00000001289|hypothetical protein LOC498154 [Source:RGD Symbol%3BAcc:1566418]
rn6_v1_chr6_+_96007805_96007805	0.0154001	Hoxa2	ENSRNOT00000010163|Mnat1|ENSRNOG00000007267|MNAT CDK-activating kinase assembly factor 1 [Source:RGD Symbol%3BAcc:628874]
rn6_v1_chr1_+_140601791_140601791	0.0153742	Hoxa2	ENSRNOT00000091588|Isg20|ENSRNOG00000054561|interferon stimulated exonuclease gene 20 [Source:RGD Symbol%3BAcc:1306407]
rn6_v1_chr19_+_6046665_6046665	0.015374	Hoxa2	ENSRNOT00000084126|Cdh8|ENSRNOG00000056643|cadherin 8 [Source:RGD Symbol%3BAcc:69286]
rn6_v1_chr17_+_55065621_55065621	0.0152936	Hoxa2	ENSRNOT00000086342|Zfp438|ENSRNOG00000028329|zinc finger protein 438 [Source:RGD Symbol%3BAcc:1307214]
rn6_v1_chrX_-_1952111_1952111	0.0152207	Hoxa2	ENSRNOT00000061140|Jade3|ENSRNOG00000039837|jade family PHD finger 3 [Source:RGD Symbol%3BAcc:1563945]
rn6_v1_chr10_-_87153982_87153982	0.0151386	Hoxa2	ENSRNOT00000014414|Krt222|ENSRNOG00000010839|keratin 222 [Source:RGD Symbol%3BAcc:1560383]
rn6_v1_chr5_+_122019301_122019301	0.015123	Hoxa2	ENSRNOT00000068158|Pde4b|ENSRNOG00000005905|phosphodiesterase 4B [Source:RGD Symbol%3BAcc:3280]
rn6_v1_chr2_+_60180215_60180215	0.0151103	Hoxa2	ENSRNOT00000084624|Prlr|ENSRNOG00000057557|prolactin receptor [Source:RGD Symbol%3BAcc:3407]
rn6_v1_chr10_+_1920529_1920529	0.0150814	Hoxa2	ENSRNOT00000072296|A630010A05Rik|ENSRNOG00000050955|RIKEN cDNA A630010A05 gene [Source:MGI Symbol%3BAcc:MGI:3584518]
rn6_v1_chr3_+_101156212_101156212	0.0150409	Hoxa2	ENSRNOT00000065333|Ccdc34|ENSRNOG00000005902|coiled-coil domain containing 34 [Source:RGD Symbol%3BAcc:1560583]
rn6_v1_chr9_+_118849302_118849302	0.0150279	Hoxa2	ENSRNOT00000087592|Dlgap1|ENSRNOG00000016196|DLG associated protein 1 [Source:RGD Symbol%3BAcc:620223]
rn6_v1_chr3_+_122544788_122544788	0.0149331	Hoxa2	ENSRNOT00000063828|Tgm3|ENSRNOG00000006753|transglutaminase 3 [Source:RGD Symbol%3BAcc:1561831]
rn6_v1_chr13_-_99468775_99468778	0.0148496	Hoxa2	ENSRNOT00000086888|Nvl|ENSRNOG00000003629|nuclear VCP-like [Source:RGD Symbol%3BAcc:1311270]	ENSRNOT00000004927|Nvl|ENSRNOG00000003629|nuclear VCP-like [Source:RGD Symbol%3BAcc:1311270]
rn6_v1_chr10_+_66732390_66732390	0.014696	Hoxa2	ENSRNOT00000089538|Nf1|ENSRNOG00000013780|neurofibromin 1 [Source:RGD Symbol%3BAcc:3168]
rn6_v1_chr16_-_38063821_38063821	0.0146901	Hoxa2	ENSRNOT00000077452|Glra3|ENSRNOG00000049792|glycine receptor%2C alpha 3 [Source:RGD Symbol%3BAcc:621229]	ENSRNOT00000089533|Glra3|ENSRNOG00000049792|glycine receptor%2C alpha 3 [Source:RGD Symbol%3BAcc:621229]
rn6_v1_chr1_-_53563032_53563032	0.0144584	Hoxa2	ENSRNOT00000044831|Ttll2|ENSRNOG00000033901|tubulin tyrosine ligase like 2 [Source:RGD Symbol%3BAcc:1305200]
rn6_v1_chr5_-_135561914_135561914	0.014295	Hoxa2	ENSRNOT00000023178|Mmachc|ENSRNOG00000017233|methylmalonic aciduria (cobalamin deficiency) cblC type%2C with homocystinuria [Source:RGD Symbol%3BAcc:1310806]
rn6_v1_chr19_+_683484_683484	0.0142511	Hoxa2	ENSRNOT00000090332|Terb1|ENSRNOG00000055097|telomere repeat binding bouquet formation protein 1 [Source:RGD Symbol%3BAcc:1310400]
rn6_v1_chr1_-_7726401_7726401	0.0142243	Hoxa2	ENSRNOT00000021524|Pex3|ENSRNOG00000015660|peroxisomal biogenesis factor 3 [Source:RGD Symbol%3BAcc:621636]
rn6_v1_chr2_-_196526886_196526886	0.0140276	Hoxa2	ENSRNOT00000077325|Setdb1|ENSRNOG00000021143|SET domain%2C bifurcated 1 [Source:RGD Symbol%3BAcc:1308370]
rn6_v1_chr10_+_99437436_99437436	0.0140004	Hoxa2	ENSRNOT00000006254|Kcnj2|ENSRNOG00000004720|potassium voltage-gated channel subfamily J member 2 [Source:RGD Symbol%3BAcc:61968]
rn6_v1_chr7_+_28762417_28762417	0.0136996	Hoxa2	ENSRNOT00000006903|Washc3|ENSRNOG00000005102|WASH complex subunit 3 [Source:RGD Symbol%3BAcc:1563761]
rn6_v1_chr8_-_54990604_54990604	0.0135537	Hoxa2	ENSRNOT00000059192|Tex12|ENSRNOG00000038746|testis expressed 12 [Source:RGD Symbol%3BAcc:1597300]
rn6_v1_chr2_+_211359623_211359623	0.0134787	Hoxa2	ENSRNOT00000027530|Taf13|ENSRNOG00000020315|TATA-box binding protein associated factor 13 [Source:RGD Symbol%3BAcc:1305398]
rn6_v1_chr1_-_197821936_197821936	0.0134224	Hoxa2	ENSRNOT00000055027|Cd19|ENSRNOG00000018311|CD19 molecule [Source:RGD Symbol%3BAcc:1309086]
rn6_v1_chr19_-_33424955_33424972	0.0132615	Hoxa2	ENSRNOT00000016558|Ttc29|ENSRNOG00000012342|tetratricopeptide repeat domain 29 [Source:RGD Symbol%3BAcc:1589777]	ENSRNOT00000089569|Ttc29|ENSRNOG00000012342|tetratricopeptide repeat domain 29 [Source:RGD Symbol%3BAcc:1589777]
rn6_v1_chr17_-_48562838_48562905	0.0131737	Hoxa2	ENSRNOT00000017102|Amph|ENSRNOG00000012490|amphiphysin [Source:RGD Symbol%3BAcc:620274]	ENSRNOT00000084702|Amph|ENSRNOG00000012490|amphiphysin [Source:RGD Symbol%3BAcc:620274]
rn6_v1_chr9_+_10760113_10760113	0.0131713	Hoxa2	ENSRNOT00000073054|Arrdc5|ENSRNOG00000047223|arrestin domain containing 5 [Source:RGD Symbol%3BAcc:1591748]
rn6_v1_chrX_-_14642424_14642424	0.0131484	Hoxa2	ENSRNOT00000004808|Dynlt3|ENSRNOG00000003611|dynein light chain Tctex-type 3 [Source:RGD Symbol%3BAcc:1549755]
rn6_v1_chr19_+_52258947_52258947	0.0126602	Hoxa2	ENSRNOT00000021072|Adad2|ENSRNOG00000015690|adenosine deaminase domain containing 2 [Source:RGD Symbol%3BAcc:1586236]
rn6_v1_chr7_-_3229167_3229167	0.0126551	Hoxa2	ENSRNOT00000008929|Tmem198b|ENSRNOG00000006827|transmembrane protein 198b [Source:RGD Symbol%3BAcc:1562342]
rn6_v1_chr5_-_146446227_146446227	0.0126423	Hoxa2	ENSRNOT00000044868|Hmgb4|ENSRNOG00000032889|high-mobility group box 4 [Source:RGD Symbol%3BAcc:1596426]
rn6_v1_chr19_+_17290178_17290178	0.0124074	Hoxa2	ENSRNOT00000060865|Aktip|ENSRNOG00000011956|AKT interacting protein [Source:RGD Symbol%3BAcc:1311170]
rn6_v1_chr13_+_24823488_24823488	0.0123368	Hoxa2	ENSRNOT00000019907|Cdh20|ENSRNOG00000014556|cadherin 20 [Source:RGD Symbol%3BAcc:1305438]
rn6_v1_chr7_-_136853957_136853957	0.0121981	Hoxa2	ENSRNOT00000008985|Nell2|ENSRNOG00000006235|neural EGFL like 2 [Source:RGD Symbol%3BAcc:620999]
rn6_v1_chrX_-_77295426_77295426	0.0120851	Hoxa2	ENSRNOT00000090833|Taf9b|ENSRNOG00000061102|TATA-box binding protein associated factor 9b [Source:RGD Symbol%3BAcc:621116]
rn6_v1_chr5_-_2803855_2803855	0.0120458	Hoxa2	ENSRNOT00000009490|LOC297756|ENSRNOG00000007238|ribosomal protein S8-like [Source:RGD Symbol%3BAcc:1359575]
rn6_v1_chr1_-_123100464_123100464	0.0120007	Hoxa2	ENSRNOT00000031973|Peg12|ENSRNOG00000024429|paternally expressed 12 [Source:RGD Symbol%3BAcc:1307664]
rn6_v1_chr14_+_22417206_22417206	0.0118476	Hoxa2	ENSRNOT00000052369|Ugt2b37|ENSRNOG00000046540|UDP-glucuronosyltransferase 2 family%2C member 37 [Source:RGD Symbol%3BAcc:3937]
rn6_v1_chrX_+_44907521_44907521	0.0117018	Hoxa2	ENSRNOT00000004901|Tbl1x|ENSRNOG00000003686|transducin (beta)-like 1 X-linked [Source:RGD Symbol%3BAcc:1563868]
rn6_v1_chr13_+_79269973_79269973	0.0116042	Hoxa2	ENSRNOT00000003969|Tnfsf4|ENSRNOG00000002968|tumor necrosis factor superfamily member 4 [Source:RGD Symbol%3BAcc:619816]
rn6_v1_chr11_+_61761613_61761616	0.0115983	Hoxa2	ENSRNOT00000089340|Qtrt2|ENSRNOG00000060729|queuine tRNA-ribosyltransferase accessory subunit 2 [Source:RGD Symbol%3BAcc:1310054]	ENSRNOT00000091598|Qtrt2|ENSRNOG00000060729|queuine tRNA-ribosyltransferase accessory subunit 2 [Source:RGD Symbol%3BAcc:1310054]
rn6_v1_chr1_-_171979933_171979933	0.0115006	Hoxa2	ENSRNOT00000026744|Cyb5r2|ENSRNOG00000019751|cytochrome b5 reductase 2 [Source:RGD Symbol%3BAcc:1308421]
rn6_v1_chr3_+_40038336_40038336	0.0114154	Hoxa2	ENSRNOT00000048804|Galnt13|ENSRNOG00000005335|polypeptide N-acetylgalactosaminyltransferase 13 [Source:RGD Symbol%3BAcc:735044]
rn6_v1_chr3_-_66279155_66279155	0.0111891	Hoxa2	ENSRNOT00000079887|Cerkl|ENSRNOG00000030212|ceramide kinase-like [Source:RGD Symbol%3BAcc:1561057]
rn6_v1_chr6_+_64808238_64808238	0.0111606	Hoxa2	ENSRNOT00000093195|Nrcam|ENSRNOG00000004067|neuronal cell adhesion molecule [Source:RGD Symbol%3BAcc:3209]
rn6_v1_chr2_+_149315189_149315189	0.0110221	Hoxa2	ENSRNOT00000082464|Med12l|ENSRNOG00000010680|mediator complex subunit 12-like [Source:RGD Symbol%3BAcc:1592212]
rn6_v1_chr1_-_164101578_164101578	0.0108513	Hoxa2	ENSRNOT00000022176|Uvrag|ENSRNOG00000016206|UV radiation resistance associated [Source:RGD Symbol%3BAcc:1589754]
rn6_v1_chr20_+_8312792_8312792	0.010733	Hoxa2	ENSRNOT00000083108|Cmtr1|ENSRNOG00000000532|cap methyltransferase 1 [Source:RGD Symbol%3BAcc:1307801]
rn6_v1_chrX_+_65800059_65800059	0.010688	Hoxa2	ENSRNOT00000076428|Gpr165|ENSRNOG00000012995|G protein-coupled receptor 165 [Source:RGD Symbol%3BAcc:1564566]
rn6_v1_chr7_+_11660934_11660934	0.0106624	Hoxa2	ENSRNOT00000022336|Lmnb2|ENSRNOG00000025742|lamin B2 [Source:RGD Symbol%3BAcc:1563803]
rn6_v1_chr2_+_208373154_208373154	0.0105324	Hoxa2	ENSRNOT00000082943|LOC100911796|ENSRNOG00000050743|adenosine receptor A3-like [Source:RGD Symbol%3BAcc:6491091]	ENSRNOT00000050538|LOC100911796|ENSRNOG00000050743|adenosine receptor A3-like [Source:RGD Symbol%3BAcc:6491091]
rn6_v1_chr3_+_112346627_112346627	0.0105009	Hoxa2	ENSRNOT00000074392|Snap23|ENSRNOG00000050552|synaptosomal-associated protein 23 [Source:MGI Symbol%3BAcc:MGI:109356]
rn6_v1_chr7_-_144778339_144778339	0.0104402	Hoxa2	ENSRNOT00000082149|Smug1|ENSRNOG00000036842|single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:RGD Symbol%3BAcc:631403]
rn6_v1_chr20_-_5166252_5166252	0.0103588	Hoxa2	ENSRNOT00000001138|Aif1|ENSRNOG00000000853|allograft inflammatory factor 1 [Source:RGD Symbol%3BAcc:61924]
rn6_v1_chr10_+_47412582_47412582	0.0101266	Hoxa2	ENSRNOT00000003139|Tnfrsf13b|ENSRNOG00000002304|TNF receptor superfamily member 13B [Source:RGD Symbol%3BAcc:1595998]
rn6_v1_chr1_+_1702696_1702696	0.0100896	Hoxa2	ENSRNOT00000019181|Lrp11|ENSRNOG00000014303|LDL receptor related protein 11 [Source:RGD Symbol%3BAcc:1308602]
rn6_v1_chr15_-_33285779_33285779	0.0100318	Hoxa2	ENSRNOT00000036150|Cdh24|ENSRNOG00000013503|cadherin 24 [Source:RGD Symbol%3BAcc:1560161]
rn6_v1_chr1_+_142951094_142951094	0.00997023	Hoxa2	ENSRNOT00000077441|Slc28a1|ENSRNOG00000018940|solute carrier family 28 member 1 [Source:RGD Symbol%3BAcc:621223]
rn6_v1_chr12_+_19262977_19262977	0.0098084	Hoxa2	ENSRNOT00000001810|Zscan21|ENSRNOG00000039234|zinc finger and SCAN domain containing 21 [Source:RGD Symbol%3BAcc:1309981]
rn6_v1_chr3_-_47025128_47025128	0.00976582	Hoxa2	ENSRNOT00000011682|Rbms1|ENSRNOG00000008482|RNA binding motif%2C single stranded interacting protein 1 [Source:RGD Symbol%3BAcc:1307777]
rn6_v1_chr5_+_71742911_71742911	0.00947856	Hoxa2	ENSRNOT00000047225|Zfp462|ENSRNOG00000032048|zinc finger protein 462 [Source:RGD Symbol%3BAcc:1562123]
rn6_v1_chr4_+_99753500_99753553	0.00935033	Hoxa2	ENSRNOT00000086291|Immt|ENSRNOG00000009097|inner membrane mitochondrial protein [Source:RGD Symbol%3BAcc:1310684]	ENSRNOT00000043199|Immt|ENSRNOG00000009097|inner membrane mitochondrial protein [Source:RGD Symbol%3BAcc:1310684]
rn6_v1_chr17_+_53988541_53988541	0.00934255	Hoxa2	ENSRNOT00000079433|Tbce|ENSRNOG00000029667|tubulin folding cofactor E [Source:RGD Symbol%3BAcc:1305533]
rn6_v1_chr9_+_95309759_95309759	0.0093266	Hoxa2	ENSRNOT00000051438|Mroh2a|ENSRNOG00000042182|maestro heat-like repeat family member 2A [Source:RGD Symbol%3BAcc:1565687]
rn6_v1_chrX_-_15467875_15467875	0.00932212	Hoxa2	ENSRNOT00000011207|Pim2|ENSRNOG00000008177|Pim-2 proto-oncogene%2C serine/threonine kinase [Source:RGD Symbol%3BAcc:1560759]
rn6_v1_chr8_-_27973980_27973980	0.00906066	Hoxa2	ENSRNOT00000037757|Bin2a|ENSRNOG00000032461|beta-galactosidase-like protein [Source:RGD Symbol%3BAcc:1359233]
rn6_v1_chr1_-_82580761_82580761	0.00905826	Hoxa2	ENSRNOT00000028131|Axl|ENSRNOG00000020716|Axl receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620028]	ENSRNOT00000028132|Axl|ENSRNOG00000020716|Axl receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620028]
rn6_v1_chr13_+_108642156_108642156	0.00900966	Hoxa2	ENSRNOT00000004783|Smyd2|ENSRNOG00000003583|SET and MYND domain containing 2 [Source:RGD Symbol%3BAcc:727785]
rn6_v1_chr19_-_43841795_43841795	0.00899393	Hoxa2	ENSRNOT00000079539|Ldhd|ENSRNOG00000019036|lactate dehydrogenase D [Source:RGD Symbol%3BAcc:1308107]
rn6_v1_chr4_+_2527434_2527434	0.00896165	Hoxa2	ENSRNOT00000015232|Ube3c|ENSRNOG00000010702|ubiquitin protein ligase E3C [Source:RGD Symbol%3BAcc:1559986]
rn6_v1_chr12_-_18120476_18120476	0.00896158	Hoxa2	ENSRNOT00000080364|RGD1566386|ENSRNOG00000028651|similar to Hypothetical protein A430033K04 [Source:RGD Symbol%3BAcc:1566386]
rn6_v1_chr9_-_89195273_89195273	0.00881643	Hoxa2	ENSRNOT00000022281|Sphkap|ENSRNOG00000016388|SPHK1 interactor%2C AKAP domain containing [Source:RGD Symbol%3BAcc:1311951]
rn6_v1_chr16_-_48921242_48921242	0.00879121	Hoxa2	ENSRNOT00000041596|Cenpu|ENSRNOG00000022261|centromere protein U [Source:RGD Symbol%3BAcc:1562566]
rn6_v1_chr1_+_169410115_169410115	0.00838766	Hoxa2	ENSRNOT00000023043|Trim6|ENSRNOG00000017147|tripartite motif containing 6 [Source:RGD Symbol%3BAcc:1310896]
rn6_v1_chr2_-_149564113_149564113	0.008379	Hoxa2	ENSRNOT00000018628|Igsf10|ENSRNOG00000013917|immunoglobulin superfamily%2C member 10 [Source:RGD Symbol%3BAcc:735030]
rn6_v1_chr2_+_62198562_62198562	0.00823027	Hoxa2	ENSRNOT00000087636|Zfr|ENSRNOG00000011627|zinc finger RNA binding protein [Source:RGD Symbol%3BAcc:1311890]
rn6_v1_chr11_-_14160892_14160892	0.00822727	Hoxa2	ENSRNOT00000091864|Hspa13|ENSRNOG00000060979|heat shock protein 70 family%2C member 13 [Source:RGD Symbol%3BAcc:3775]
rn6_v1_chr16_-_22561496_22561496	0.00821525	Hoxa2	ENSRNOT00000016543|Lpl|ENSRNOG00000012181|lipoprotein lipase [Source:RGD Symbol%3BAcc:3017]
rn6_v1_chr7_+_42304534_42304534	0.00820953	Hoxa2	ENSRNOT00000085097|Kitlg|ENSRNOG00000005386|KIT ligand [Source:RGD Symbol%3BAcc:3086]
rn6_v1_chr13_+_82626685_82626685	0.00815736	Hoxa2	ENSRNOT00000058897|Nme7|ENSRNOG00000002898|NME/NM23 family member 7 [Source:RGD Symbol%3BAcc:619880]
rn6_v1_chr1_+_89202527_89202527	0.00801031	Hoxa2	ENSRNOT00000028526|Sbsn|ENSRNOG00000021015|suprabasin [Source:RGD Symbol%3BAcc:1562305]
rn6_v1_chr11_+_53140599_53140599	0.00793965	Hoxa2	ENSRNOT00000083438|Bbx|ENSRNOG00000001971|BBX%2C HMG-box containing [Source:RGD Symbol%3BAcc:1309769]
rn6_v1_chr15_+_4400991_4400991	0.0078915	Hoxa2	ENSRNOT00000008553|Ecd|ENSRNOG00000042253|ecdysoneless cell cycle regulator [Source:RGD Symbol%3BAcc:1565023]
rn6_v1_chr8_+_130973201_130973201	0.00787366	Hoxa2	ENSRNOT00000000239|Abhd5|ENSRNOG00000000221|abhydrolase domain containing 5 [Source:RGD Symbol%3BAcc:1303237]
rn6_v1_chr2_+_118910587_118910587	0.00782557	Hoxa2	ENSRNOT00000065518|Zfp639|ENSRNOG00000043053|zinc finger protein 639 [Source:RGD Symbol%3BAcc:1585689]
rn6_v1_chr2_+_200187179_200187184	0.0077599	Hoxa2	ENSRNOT00000093564|Notch2|ENSRNOG00000018835|notch 2 [Source:RGD Symbol%3BAcc:3188]	ENSRNOT00000025718|Notch2|ENSRNOG00000018835|notch 2 [Source:RGD Symbol%3BAcc:3188]
rn6_v1_chrX_-_123486814_123486814	0.00771436	Hoxa2	ENSRNOT00000016993|RGD1564541|ENSRNOG00000012564|similar to hypothetical protein FLJ22965 [Source:RGD Symbol%3BAcc:1564541]
rn6_v1_chr7_-_116920507_116920507	0.00763871	Hoxa2	ENSRNOT00000048363|Mroh6|ENSRNOG00000032231|maestro heat-like repeat family member 6 [Source:RGD Symbol%3BAcc:2323632]
rn6_v1_chr19_+_24545318_24545318	0.00762696	Hoxa2	ENSRNOT00000005071|Clgn|ENSRNOG00000003755|calmegin [Source:RGD Symbol%3BAcc:1592643]
rn6_v1_chr10_+_18906010_18906010	0.00752422	Hoxa2	ENSRNOT00000090659|Kcnmb1|ENSRNOG00000005465|potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:RGD Symbol%3BAcc:2961]
rn6_v1_chr5_+_159612762_159612762	0.00738916	Hoxa2	ENSRNOT00000012147|Spata21|ENSRNOG00000009058|spermatogenesis associated 21 [Source:RGD Symbol%3BAcc:1302954]
rn6_v1_chr7_+_60087429_60087429	0.0073563	Hoxa2	ENSRNOT00000073117|Lrrc10|ENSRNOG00000049607|leucine-rich repeat-containing 10 [Source:RGD Symbol%3BAcc:1307358]
rn6_v1_chrX_+_112311251_112311251	0.00707605	Hoxa2	ENSRNOT00000086698|AABR07040855.1|ENSRNOG00000051669|
rn6_v1_chr10_+_53818818_53818818	0.00703211	Hoxa2	ENSRNOT00000057260|Myh8|ENSRNOG00000050042|myosin heavy chain 8 [Source:RGD Symbol%3BAcc:620356]
rn6_v1_chr6_-_75670135_75670135	0.00697185	Hoxa2	ENSRNOT00000007300|Snx6|ENSRNOG00000005249|sorting nexin 6 [Source:RGD Symbol%3BAcc:1304647]
rn6_v1_chr5_+_73496027_73496027	0.00686589	Hoxa2	ENSRNOT00000022395|Actl7a|ENSRNOG00000016641|actin-like 7a [Source:RGD Symbol%3BAcc:1304697]
rn6_v1_chr2_+_186899324_186899324	0.00674552	Hoxa2	ENSRNOT00000057490|Etv3l|ENSRNOG00000043511|ets variant 3-like [Source:RGD Symbol%3BAcc:1562620]
rn6_v1_chrX_+_45213228_45213228	0.006617	Hoxa2	ENSRNOT00000088538|LOC103690319|ENSRNOG00000058697|odorant-binding protein [Source:RGD Symbol%3BAcc:9122946]
rn6_v1_chr2_-_196527127_196527127	0.0064617	Hoxa2	ENSRNOT00000028709|Setdb1|ENSRNOG00000021143|SET domain%2C bifurcated 1 [Source:RGD Symbol%3BAcc:1308370]
rn6_v1_chr8_-_114449956_114449956	0.00635646	Hoxa2	ENSRNOT00000056414|Col6a6|ENSRNOG00000023007|collagen type VI alpha 6 chain [Source:RGD Symbol%3BAcc:1309172]
rn6_v1_chr5_+_122390522_122390522	0.00635145	Hoxa2	ENSRNOT00000064567|Sgip1|ENSRNOG00000006357|SH3-domain GRB2-like (endophilin) interacting protein 1 [Source:RGD Symbol%3BAcc:1564957]
rn6_v1_chr17_-_54678710_54678710	0.00631599	Hoxa2	ENSRNOT00000046013|Zeb1|ENSRNOG00000017863|zinc finger E-box binding homeobox 1 [Source:RGD Symbol%3BAcc:3831]
rn6_v1_chr8_-_130338325_130338325	0.00591451	Hoxa2	ENSRNOT00000071697|Sec22c|ENSRNOG00000047873|SEC22 homolog C%2C vesicle trafficking protein [Source:RGD Symbol%3BAcc:1590146]
rn6_v1_chr2_+_124054282_124054282	0.00575364	Hoxa2	ENSRNOT00000009898|Bbs12|ENSRNOG00000007510|Bardet-Biedl syndrome 12 [Source:RGD Symbol%3BAcc:1561608]
rn6_v1_chr6_-_23404368_23404368	0.00575134	Hoxa2	ENSRNOT00000036374|Fam179a|ENSRNOG00000026344|family with sequence similarity 179%2C member A [Source:RGD Symbol%3BAcc:1310677]
rn6_v1_chr3_-_63535991_63535991	0.00571816	Hoxa2	ENSRNOT00000015722|Fkbp7|ENSRNOG00000011758|FK506 binding protein 7 [Source:RGD Symbol%3BAcc:1305293]
rn6_v1_chr16_+_2706428_2706428	0.00554486	Hoxa2	ENSRNOT00000077117|Il17rd|ENSRNOG00000021966|interleukin 17 receptor D [Source:RGD Symbol%3BAcc:1565237]
rn6_v1_chr20_+_18780605_18780605	0.00549954	Hoxa2	ENSRNOT00000000754|Bicc1|ENSRNOG00000000614|BicC family RNA binding protein 1 [Source:RGD Symbol%3BAcc:1307459]
rn6_v1_chr16_-_37908173_37908173	0.00541969	Hoxa2	ENSRNOT00000075026|Glra3|ENSRNOG00000049792|glycine receptor%2C alpha 3 [Source:RGD Symbol%3BAcc:621229]
rn6_v1_chr5_-_28317887_28317943	0.00530641	Hoxa2	ENSRNOT00000093515|Lrrc69|ENSRNOG00000006498|leucine rich repeat containing 69 [Source:RGD Symbol%3BAcc:1583733]	ENSRNOT00000093302|Lrrc69|ENSRNOG00000006498|leucine rich repeat containing 69 [Source:RGD Symbol%3BAcc:1583733]	ENSRNOT00000093691|Lrrc69|ENSRNOG00000006498|leucine rich repeat containing 69 [Source:RGD Symbol%3BAcc:1583733]	ENSRNOT00000008656|Lrrc69|ENSRNOG00000006498|leucine rich repeat containing 69 [Source:RGD Symbol%3BAcc:1583733]
rn6_v1_chr5_+_139385429_139385429	0.00529702	Hoxa2	ENSRNOT00000078622|Scmh1|ENSRNOG00000032183|sex comb on midleg homolog 1 (Drosophila) [Source:RGD Symbol%3BAcc:1305788]
rn6_v1_chr17_-_69827112_69827112	0.00526766	Hoxa2	ENSRNOT00000023835|Akr1c14|ENSRNOG00000017672|aldo-keto reductase family 1%2C member C14 [Source:RGD Symbol%3BAcc:708361]
rn6_v1_chr7_-_140172448_140172448	0.00522379	Hoxa2	ENSRNOT00000077672|LOC103692976|ENSRNOG00000055738|cyclin-T1-like [Source:RGD Symbol%3BAcc:9297474]
rn6_v1_chr18_+_86299463_86299463	0.00519395	Hoxa2	ENSRNOT00000058152|Cd226|ENSRNOG00000038197|CD226 molecule [Source:RGD Symbol%3BAcc:1311513]
rn6_v1_chrM_+_10160_10160	0.00511015	Hoxa2	ENSRNOT00000042928|Mt-nd4|ENSRNOG00000029707|mitochondrially encoded NADH dehydrogenase 4 [Source:RGD Symbol%3BAcc:620559]
rn6_v1_chr1_-_71373605_71373605	0.0050621	Hoxa2	ENSRNOT00000034854|Galp|ENSRNOG00000022129|galanin-like peptide [Source:RGD Symbol%3BAcc:620187]
rn6_v1_chr5_+_47894530_47894663	0.00504513	Hoxa2	ENSRNOT00000076035|Mdn1|ENSRNOG00000047513|midasin AAA ATPase 1 [Source:RGD Symbol%3BAcc:1306394]	ENSRNOT00000090799|Mdn1|ENSRNOG00000047513|midasin AAA ATPase 1 [Source:RGD Symbol%3BAcc:1306394]
rn6_v1_chr9_+_4817854_4817854	0.00503706	Hoxa2	ENSRNOT00000040879|LOC100910526|ENSRNOG00000050885|sulfotransferase 1C2-like [Source:RGD Symbol%3BAcc:6497849]
rn6_v1_chrX_-_83864150_83864150	0.00500869	Hoxa2	ENSRNOT00000073734|Obp1f|ENSRNOG00000049515|odorant binding protein I f [Source:RGD Symbol%3BAcc:621639]
rn6_v1_chr7_-_12601674_12601674	0.0049503	Hoxa2	ENSRNOT00000093489|Arid3a|ENSRNOG00000026435|AT-rich interaction domain 3A [Source:RGD Symbol%3BAcc:1305299]
rn6_v1_chrX_+_16050780_16050780	0.00491715	Hoxa2	ENSRNOT00000079054|Clcn5|ENSRNOG00000002862|chloride voltage-gated channel 5 [Source:RGD Symbol%3BAcc:2362]
rn6_v1_chr14_-_7325645_7325645	0.00478525	Hoxa2	ENSRNOT00000066071|Aff1|ENSRNOG00000002232|AF4/FMR2 family%2C member 1 [Source:RGD Symbol%3BAcc:1307940]
rn6_v1_chr15_-_52712995_52712995	0.00452459	Hoxa2	ENSRNOT00000039731|LOC100359986|ENSRNOG00000025536|ribosomal protein L31-like [Source:RGD Symbol%3BAcc:2323059]
rn6_v1_chr1_-_32429917_32429917	0.00435722	Hoxa2	ENSRNOT00000024111|Lpcat1|ENSRNOG00000017930|lysophosphatidylcholine acyltransferase 1 [Source:RGD Symbol%3BAcc:1311599]
rn6_v1_chr17_+_43458553_43458553	0.00424649	Hoxa2	ENSRNOT00000088939|Slc17a4|ENSRNOG00000022505|solute carrier family 17%2C member 4 [Source:RGD Symbol%3BAcc:1584758]
rn6_v1_chr14_-_5033941_5033942	0.00422224	Hoxa2	ENSRNOT00000072818|Zfp326|ENSRNOG00000047761|zinc finger protein 326 [Source:RGD Symbol%3BAcc:1592829]	ENSRNOT00000082331|Zfp326|ENSRNOG00000047761|zinc finger protein 326 [Source:RGD Symbol%3BAcc:1592829]
rn6_v1_chr1_+_85058548_85058548	0.00406579	Hoxa2	ENSRNOT00000057120|Fcgbpl1|ENSRNOG00000042899|Fc fragment of IgG binding protein-like 1 [Source:RGD Symbol%3BAcc:1311906]
rn6_v1_chr11_+_66713888_66713888	0.0040247	Hoxa2	ENSRNOT00000003340|Fbxo40|ENSRNOG00000002459|F-box protein 40 [Source:RGD Symbol%3BAcc:1309781]
rn6_v1_chrX_+_124894706_124894706	0.00402043	Hoxa2	ENSRNOT00000066677|Mcts1|ENSRNOG00000002563|MCTS1%2C re-initiation and release factor [Source:RGD Symbol%3BAcc:1566390]
rn6_v1_chr14_-_33977277_33977277	0.00369986	Hoxa2	ENSRNOT00000002890|LOC100910308|ENSRNOG00000046308|multifunctional protein ADE2-like [Source:RGD Symbol%3BAcc:6499293]
rn6_v1_chr1_-_277355075_277355075	0.00369692	Hoxa2	ENSRNOT00000036321|Dclre1a|ENSRNOG00000026204|DNA cross-link repair 1A [Source:RGD Symbol%3BAcc:1306156]
rn6_v1_chr1_+_282568287_282568287	0.00366483	Hoxa2	ENSRNOT00000015997|Ces2i|ENSRNOG00000012034|carboxylesterase 2I [Source:RGD Symbol%3BAcc:1565045]
rn6_v1_chr18_-_76653056_76653056	0.00363799	Hoxa2	ENSRNOT00000078496|Adnp2|ENSRNOG00000053370|ADNP homeobox 2 [Source:RGD Symbol%3BAcc:1308279]
rn6_v1_chr12_+_38345456_38345456	0.00362866	Hoxa2	ENSRNOT00000001685|Clip1|ENSRNOG00000001247|CAP-GLY domain containing linker protein 1 [Source:RGD Symbol%3BAcc:67404]
rn6_v1_chr5_-_135663284_135663299	0.00354614	Hoxa2	ENSRNOT00000087237|Toe1|ENSRNOG00000017561|target of EGR1%2C member 1 (nuclear) [Source:RGD Symbol%3BAcc:1309094]	ENSRNOT00000066869|Toe1|ENSRNOG00000017561|target of EGR1%2C member 1 (nuclear) [Source:RGD Symbol%3BAcc:1309094]
rn6_v1_chr9_-_82008620_82008620	0.00349347	Hoxa2	ENSRNOT00000023365|Prkag3|ENSRNOG00000017248|protein kinase AMP-activated non-catalytic subunit gamma 3 [Source:RGD Symbol%3BAcc:1308698]
rn6_v1_chr14_+_76866135_76866135	0.00334112	Hoxa2	ENSRNOT00000037291|Zfp518b|ENSRNOG00000028534|zinc finger protein 518B [Source:RGD Symbol%3BAcc:1564150]
rn6_v1_chr1_+_7726529_7726529	0.00317598	Hoxa2	ENSRNOT00000073460|Adat2|ENSRNOG00000046983|adenosine deaminase%2C tRNA-specific 2 [Source:RGD Symbol%3BAcc:1309642]
rn6_v1_chr10_-_87351030_87351045	0.00316442	Hoxa2	ENSRNOT00000034889|Krt20|ENSRNOG00000027139|keratin 20 [Source:RGD Symbol%3BAcc:628646]	ENSRNOT00000091152|Krt20|ENSRNOG00000027139|keratin 20 [Source:RGD Symbol%3BAcc:628646]
rn6_v1_chr14_+_86673775_86673817	0.00315188	Hoxa2	ENSRNOT00000091873|Ppia|ENSRNOG00000027864|peptidylprolyl isomerase A [Source:RGD Symbol%3BAcc:3372]	ENSRNOT00000079015|Ppia|ENSRNOG00000027864|peptidylprolyl isomerase A [Source:RGD Symbol%3BAcc:3372]
rn6_v1_chr1_-_23556241_23556241	0.00312558	Hoxa2	ENSRNOT00000072943|LOC100910446|ENSRNOG00000048248|syntaxin-7-like [Source:RGD Symbol%3BAcc:6498726]
rn6_v1_chr10_+_18912865_18912865	0.00304034	Hoxa2	ENSRNOT00000007393|Kcnmb1|ENSRNOG00000005465|potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:RGD Symbol%3BAcc:2961]
rn6_v1_chr7_-_93502571_93502591	0.00303803	Hoxa2	ENSRNOT00000077033|Samd12|ENSRNOG00000043390|sterile alpha motif domain containing 12 [Source:RGD Symbol%3BAcc:1561402]	ENSRNOT00000076080|Samd12|ENSRNOG00000043390|sterile alpha motif domain containing 12 [Source:RGD Symbol%3BAcc:1561402]
rn6_v1_chr13_+_49250301_49250301	0.00301856	Hoxa2	ENSRNOT00000036110|Rbbp5|ENSRNOG00000021289|RB binding protein 5%2C histone lysine methyltransferase complex subunit [Source:RGD Symbol%3BAcc:1305532]
rn6_v1_chr7_-_121058029_121058029	0.00301347	Hoxa2	ENSRNOT00000068033|Cbx6|ENSRNOG00000046955|chromobox 6 [Source:RGD Symbol%3BAcc:1307314]
rn6_v1_chr9_-_99659425_99659425	0.00288731	Hoxa2	ENSRNOT00000051686|Olr1343|ENSRNOG00000047906|olfactory receptor 1343 [Source:RGD Symbol%3BAcc:1332746]
rn6_v1_chr12_-_30151415_30151415	0.00284456	Hoxa2	ENSRNOT00000079176|Crcp|ENSRNOG00000000901|CGRP receptor component [Source:RGD Symbol%3BAcc:620753]
rn6_v1_chr17_+_49714294_49714294	0.00282708	Hoxa2	ENSRNOT00000018190|Rala|ENSRNOG00000013454|RAS like proto-oncogene A [Source:RGD Symbol%3BAcc:619851]
rn6_v1_chr17_+_10586043_10586043	0.00281095	Hoxa2	ENSRNOT00000023125|LOC306766|ENSRNOG00000017133|hypothetical LOC306766 [Source:RGD Symbol%3BAcc:1359256]
rn6_v1_chr6_+_126623015_126623015	0.00266254	Hoxa2	ENSRNOT00000010672|Tmem251|ENSRNOG00000008101|transmembrane protein 251 [Source:RGD Symbol%3BAcc:1566396]
rn6_v1_chr9_+_79944132_79944155	0.00263078	Hoxa2	ENSRNOT00000071856|Smarcal1|ENSRNOG00000016503|Swi/SNF related matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1 [Source:RGD Symbol%3BAcc:1306134]	ENSRNOT00000022459|Smarcal1|ENSRNOG00000016503|Swi/SNF related matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1 [Source:RGD Symbol%3BAcc:1306134]
rn6_v1_chr12_-_29919320_29919320	0.00261358	Hoxa2	ENSRNOT00000038092|Tyw1|ENSRNOG00000024352|tRNA-yW synthesizing protein 1 homolog [Source:RGD Symbol%3BAcc:1310420]
rn6_v1_chr17_-_42422053_42422053	0.002532	Hoxa2	ENSRNOT00000048298|Fam65b|ENSRNOG00000018804|family with sequence similarity 65%2C member B [Source:RGD Symbol%3BAcc:1306939]
rn6_v1_chr13_+_101381510_101381510	0.00240536	Hoxa2	ENSRNOT00000004821|Tlr5|ENSRNOG00000022067|toll-like receptor 5 [Source:RGD Symbol%3BAcc:631351]
rn6_v1_chr12_+_30450316_30450316	0.00206582	Hoxa2	ENSRNOT00000001222|Phkg1|ENSRNOG00000000920|phosphorylase kinase%2C gamma 1 [Source:RGD Symbol%3BAcc:3325]
rn6_v1_chr2_-_259382765_259382765	0.00175958	Hoxa2	ENSRNOT00000091407|St6galnac3|ENSRNOG00000056894|ST6 N-acetylgalactosaminide alpha-2%2C6-sialyltransferase 3 [Source:RGD Symbol%3BAcc:3677]
rn6_v1_chr16_-_52127591_52127591	0.00171867	Hoxa2	ENSRNOT00000033652|Triml2|ENSRNOG00000028299|tripartite motif family-like 2 [Source:RGD Symbol%3BAcc:1565382]
rn6_v1_chr9_-_100445158_100445158	0.00164494	Hoxa2	ENSRNOT00000056558|Mterf4|ENSRNOG00000037376|mitochondrial transcription termination factor 4 [Source:RGD Symbol%3BAcc:1562440]
rn6_v1_chr4_-_181348038_181348038	0.00156539	Hoxa2	ENSRNOT00000082879|LOC690784|ENSRNOG00000026864|hypothetical protein LOC690783 [Source:RGD Symbol%3BAcc:1592184]
rn6_v1_chr13_+_71331052_71331052	0.00150232	Hoxa2	ENSRNOT00000075480|Glul|ENSRNOG00000049560|glutamate-ammonia ligase [Source:RGD Symbol%3BAcc:2710]
rn6_v1_chr4_-_120041238_120041238	0.00149346	Hoxa2	ENSRNOT00000073799|LOC100911337|ENSRNOG00000059069|40S ribosomal protein S25-like [Source:RGD Symbol%3BAcc:6493463]
rn6_v1_chrX_-_71169865_71169865	0.0014619	Hoxa2	ENSRNOT00000050415|Il2rg|ENSRNOG00000003954|interleukin 2 receptor subunit gamma [Source:RGD Symbol%3BAcc:621466]
rn6_v1_chr8_-_69593223_69593223	0.00140651	Hoxa2	ENSRNOT00000066919|Tmem185a|ENSRNOG00000011047|transmembrane protein 185A [Source:RGD Symbol%3BAcc:1563037]
rn6_v1_chr1_-_266142538_266142538	0.00139733	Hoxa2	ENSRNOT00000026792|Actr1a|ENSRNOG00000019725|ARP1 actin-related protein 1 homolog A%2C centractin alpha [Source:RGD Symbol%3BAcc:1307025]
rn6_v1_chr10_+_67810810_67810810	0.00136425	Hoxa2	ENSRNOT00000079156|Psmd11|ENSRNOG00000005538|proteasome 26S subunit%2C non-ATPase 11 [Source:RGD Symbol%3BAcc:1306450]
rn6_v1_chr12_+_9846398_9846398	0.0013453	Hoxa2	ENSRNOT00000075162|Mtif3|ENSRNOG00000047329|mitochondrial translational initiation factor 3 [Source:RGD Symbol%3BAcc:1592673]
rn6_v1_chr8_-_126390801_126390801	0.00133613	Hoxa2	ENSRNOT00000089732|AABR07071661.1|ENSRNOG00000053820|
rn6_v1_chr3_+_161149935_161149935	0.00126939	Hoxa2	ENSRNOT00000073626|Wfdc13|ENSRNOG00000045656|WAP four-disulfide core domain 13 [Source:RGD Symbol%3BAcc:2319575]
rn6_v1_chr9_+_8052210_8052210	0.00126263	Hoxa2	ENSRNOT00000073659|Adgre4|ENSRNOG00000050325|adhesion G protein-coupled receptor E4 [Source:RGD Symbol%3BAcc:1359641]
rn6_v1_chr17_+_78911581_78911581	0.00117349	Hoxa2	ENSRNOT00000085104|AC128960.2|ENSRNOG00000057958|
rn6_v1_chr2_-_188645196_188645196	0.00106699	Hoxa2	ENSRNOT00000083793|Efna3|ENSRNOG00000057322|ephrin A3 [Source:RGD Symbol%3BAcc:620390]
rn6_v1_chr19_+_30936703_30936703	0.00099937	Hoxa2	ENSRNOT00000024568|Smarca5|ENSRNOG00000018149|SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5 [Source:RGD Symbol%3BAcc:1308832]
rn6_v1_chr10_-_18506337_18506337	0.00099817	Hoxa2	ENSRNOT00000043036|Gabrp|ENSRNOG00000032417|gamma-aminobutyric acid type A receptor pi subunit [Source:RGD Symbol%3BAcc:620532]
rn6_v1_chr20_-_28263037_28263037	0.00095089	Hoxa2	ENSRNOT00000030348|Edar|ENSRNOG00000028598|ectodysplasin-A receptor [Source:RGD Symbol%3BAcc:1561714]
rn6_v1_chr5_-_58987760_58987760	0.000891242	Hoxa2	ENSRNOT00000035040|Sit1|ENSRNOG00000021546|signaling threshold regulating transmembrane adaptor 1 [Source:RGD Symbol%3BAcc:1559919]
rn6_v1_chr4_+_45120576_45120576	0.000890729	Hoxa2	ENSRNOT00000077961|ST7|ENSRNOG00000056243|suppression of tumorigenicity 7 [Source:RGD Symbol%3BAcc:1303148]
rn6_v1_chrX_-_107542510_107542510	0.000844516	Hoxa2	ENSRNOT00000074140|Rab9b|ENSRNOG00000047960|RAB9B%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:1562951]
rn6_v1_chr16_+_6434468_6434468	0.000750349	Hoxa2	ENSRNOT00000012906|LOC108348453|ENSRNOG00000009738|calsequestrin-1-like [Source:RGD Symbol%3BAcc:11399163]
rn6_v1_chr6_-_42312915_42312935	0.000705072	Hoxa2	ENSRNOT00000033550|LOC690276|ENSRNOG00000024338|hypothetical protein LOC690276 [Source:RGD Symbol%3BAcc:1582838]	ENSRNOT00000081004|LOC690276|ENSRNOG00000024338|hypothetical protein LOC690276 [Source:RGD Symbol%3BAcc:1582838]
rn6_v1_chr3_-_2453933_2453933	0.000690865	Hoxa2	ENSRNOT00000014060|Slc34a3|ENSRNOG00000010451|solute carrier family 34 member 3 [Source:RGD Symbol%3BAcc:708551]
rn6_v1_chr10_+_86819472_86819472	0.000686176	Hoxa2	ENSRNOT00000081424|Cdc6|ENSRNOG00000027787|cell division cycle 6 [Source:RGD Symbol%3BAcc:1309157]
rn6_v1_chr1_-_37863756_37863756	0.000667424	Hoxa2	ENSRNOT00000077781|Zfp874b|ENSRNOG00000051377|zinc finger protein 874b [Source:RGD Symbol%3BAcc:1594209]
rn6_v1_chr2_-_183210799_183210799	0.000522873	Hoxa2	ENSRNOT00000085382|Trim2|ENSRNOG00000010124|tripartite motif-containing 2 [Source:RGD Symbol%3BAcc:1310981]
rn6_v1_chr9_-_81880105_81880105	0.000435545	Hoxa2	ENSRNOT00000022677|Rnf25|ENSRNOG00000016886|ring finger protein 25 [Source:RGD Symbol%3BAcc:1311557]
rn6_v1_chr8_-_62458301_62458301	0.000366652	Hoxa2	ENSRNOT00000021653|Cyp1a2|ENSRNOG00000016173|cytochrome P450%2C family 1%2C subfamily a%2C polypeptide 2 [Source:RGD Symbol%3BAcc:2459]
rn6_v1_chr4_-_58881045_58881045	0.000343774	Hoxa2	ENSRNOT00000087241|Podxl|ENSRNOG00000012495|podocalyxin-like [Source:RGD Symbol%3BAcc:621878]
rn6_v1_chr8_-_77398156_77398248	0.000300227	Hoxa2	ENSRNOT00000091858|Lipc|ENSRNOG00000060338|lipase C%2C hepatic type [Source:RGD Symbol%3BAcc:3009]	ENSRNOT00000085349|Lipc|ENSRNOG00000060338|lipase C%2C hepatic type [Source:RGD Symbol%3BAcc:3009]	ENSRNOT00000082763|Lipc|ENSRNOG00000060338|lipase C%2C hepatic type [Source:RGD Symbol%3BAcc:3009]
