rn6_v1_chr13_+_85818427_85818473	0.102437	Hoxd9	ENSRNOT00000077227|Rxrg|ENSRNOG00000004537|retinoid X receptor gamma [Source:RGD Symbol%3BAcc:620046]	ENSRNOT00000006117|Rxrg|ENSRNOG00000004537|retinoid X receptor gamma [Source:RGD Symbol%3BAcc:620046]
rn6_v1_chr7_-_94774569_94774569	0.0933462	Hoxd9	ENSRNOT00000036399|Dscc1|ENSRNOG00000026502|DNA replication and sister chromatid cohesion 1 [Source:RGD Symbol%3BAcc:1561749]
rn6_v1_chr11_+_15081774_15081774	0.0862026	Hoxd9	ENSRNOT00000009911|LOC108348050|ENSRNOG00000050713|ubiquitin carboxyl-terminal hydrolase 25-like [Source:RGD Symbol%3BAcc:11392568]
rn6_v1_chr17_-_51912496_51912496	0.0825783	Hoxd9	ENSRNOT00000019272|Inhba|ENSRNOG00000014320|inhibin beta A subunit [Source:RGD Symbol%3BAcc:62074]
rn6_v1_chr9_+_77320726_77320726	0.0749062	Hoxd9	ENSRNOT00000068450|Spag16|ENSRNOG00000042609|sperm associated antigen 16 [Source:RGD Symbol%3BAcc:1565062]
rn6_v1_chr10_-_97582188_97582188	0.0741649	Hoxd9	ENSRNOT00000005076|Rgs9|ENSRNOG00000003800|regulator of G-protein signaling 9 [Source:RGD Symbol%3BAcc:3572]
rn6_v1_chr1_+_141218095_141218095	0.0740348	Hoxd9	ENSRNOT00000051411|LOC691427|ENSRNOG00000031802|similar to 6.8 kDa mitochondrial proteolipid [Source:RGD Symbol%3BAcc:1583946]
rn6_v1_chr2_-_220838905_220838905	0.0700623	Hoxd9	ENSRNOT00000078914|AABR07013065.1|ENSRNOG00000055846|
rn6_v1_chr18_-_1828606_1828606	0.0678267	Hoxd9	ENSRNOT00000033312|Esco1|ENSRNOG00000014031|establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:RGD Symbol%3BAcc:1596873]
rn6_v1_chr8_-_39190457_39190457	0.0650034	Hoxd9	ENSRNOT00000090161|Stt3a|ENSRNOG00000031896|STT3A%2C catalytic subunit of the oligosaccharyltransferase complex [Source:RGD Symbol%3BAcc:1565793]
rn6_v1_chr16_+_39827749_39827749	0.0641834	Hoxd9	ENSRNOT00000074885|Wdr17|ENSRNOG00000048847|WD repeat domain 17 [Source:RGD Symbol%3BAcc:1590843]
rn6_v1_chr18_+_81821127_81821127	0.0624924	Hoxd9	ENSRNOT00000058199|Fbxo15|ENSRNOG00000038225|F-box protein 15 [Source:RGD Symbol%3BAcc:1310628]
rn6_v1_chr12_-_6078411_6078411	0.0546541	Hoxd9	ENSRNOT00000001197|Rxfp2|ENSRNOG00000000897|relaxin/insulin-like family peptide receptor 2 [Source:RGD Symbol%3BAcc:1309449]
rn6_v1_chrX_+_51286737_51286737	0.0536524	Hoxd9	ENSRNOT00000035692|Dmd|ENSRNOG00000046366|dystrophin [Source:RGD Symbol%3BAcc:2507]
rn6_v1_chr9_+_12114977_12114977	0.0508898	Hoxd9	ENSRNOT00000073673|AABR07066648.1|ENSRNOG00000047075|
rn6_v1_chr15_-_9086282_9086282	0.0500696	Hoxd9	ENSRNOT00000008989|Thrb|ENSRNOG00000006649|thyroid hormone receptor beta [Source:RGD Symbol%3BAcc:3858]
rn6_v1_chr2_-_178612470_178612470	0.0490672	Hoxd9	ENSRNOT00000013499|Tmem144|ENSRNOG00000010081|transmembrane protein 144 [Source:RGD Symbol%3BAcc:1565845]
rn6_v1_chr2_+_216863428_216863428	0.0486512	Hoxd9	ENSRNOT00000068413|Col11a1|ENSRNOG00000023148|collagen type XI alpha 1 chain [Source:RGD Symbol%3BAcc:2372]
rn6_v1_chr14_+_17228856_17228856	0.0471918	Hoxd9	ENSRNOT00000003082|Cxcl9|ENSRNOG00000022242|C-X-C motif chemokine ligand 9 [Source:RGD Symbol%3BAcc:628798]
rn6_v1_chrX_+_14019961_14019961	0.0456738	Hoxd9	ENSRNOT00000004785|Sytl5|ENSRNOG00000003585|synaptotagmin-like 5 [Source:RGD Symbol%3BAcc:631342]
rn6_v1_chrM_+_3904_3904	0.0451879	Hoxd9	ENSRNOT00000040993|Mt-nd2|ENSRNOG00000031033|mitochondrially encoded NADH dehydrogenase 2 [Source:RGD Symbol%3BAcc:620556]
rn6_v1_chr16_-_3762877_3762877	0.045006	Hoxd9	ENSRNOT00000052224|Duxbl1|ENSRNOG00000025408|double homeobox B-like 1 [Source:RGD Symbol%3BAcc:1311053]
rn6_v1_chr15_-_37056892_37056892	0.0439503	Hoxd9	ENSRNOT00000047731|Zmym5|ENSRNOG00000029220|zinc finger MYM-type containing 5 [Source:RGD Symbol%3BAcc:1306353]
rn6_v1_chr13_+_26903052_26903052	0.0437892	Hoxd9	ENSRNOT00000003625|Serpinb5|ENSRNOG00000002640|serpin family B member 5 [Source:RGD Symbol%3BAcc:69342]
rn6_v1_chr9_-_30844199_30844199	0.0434157	Hoxd9	ENSRNOT00000017169|Col19a1|ENSRNOG00000012759|collagen type XIX alpha 1 chain [Source:RGD Symbol%3BAcc:1308920]
rn6_v1_chr10_-_91661558_91661558	0.0432967	Hoxd9	ENSRNOT00000043156|AABR07030521.1|ENSRNOG00000042833|
rn6_v1_chr11_-_43022565_43022565	0.0419737	Hoxd9	ENSRNOT00000002285|Riox2|ENSRNOG00000001680|ribosomal oxygenase 2 [Source:RGD Symbol%3BAcc:708521]
rn6_v1_chr17_+_53965562_53965562	0.0415852	Hoxd9	ENSRNOT00000090387|Ggps1|ENSRNOG00000016767|geranylgeranyl diphosphate synthase 1 [Source:RGD Symbol%3BAcc:1359680]
rn6_v1_chr2_+_197715761_197715761	0.0401543	Hoxd9	ENSRNOT00000083069|Golph3l|ENSRNOG00000047620|golgi phosphoprotein 3-like [Source:RGD Symbol%3BAcc:1359281]
rn6_v1_chr3_+_28627084_28627084	0.0396862	Hoxd9	ENSRNOT00000049884|Arhgap15|ENSRNOG00000031168|Rho GTPase activating protein 15 [Source:RGD Symbol%3BAcc:1359304]
rn6_v1_chr14_+_12218553_12218553	0.0395933	Hoxd9	ENSRNOT00000003237|Prkg2|ENSRNOG00000002361|protein kinase%2C cGMP-dependent%2C type II [Source:RGD Symbol%3BAcc:3401]
rn6_v1_chr4_-_29778039_29778039	0.0391177	Hoxd9	ENSRNOT00000074177|Sgce|ENSRNOG00000046905|sarcoglycan%2C epsilon [Source:RGD Symbol%3BAcc:1303201]
rn6_v1_chr2_-_149333597_149333597	0.0389319	Hoxd9	ENSRNOT00000066948|P2ry14|ENSRNOG00000013872|purinergic receptor P2Y14 [Source:RGD Symbol%3BAcc:70912]
rn6_v1_chr10_-_88019967_88019967	0.0367846	Hoxd9	ENSRNOT00000047580|Krt36|ENSRNOG00000031805|keratin 36 [Source:RGD Symbol%3BAcc:1305792]
rn6_v1_chr17_+_87020089_87020089	0.0355664	Hoxd9	ENSRNOT00000043523|Rpl37-ps1|ENSRNOG00000048958|ribosomal protein L37%2C pseudogene 1 [Source:RGD Symbol%3BAcc:1587113]
rn6_v1_chr11_-_81444375_81444621	0.035486	Hoxd9	ENSRNOT00000058479|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000078131|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000080949|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000080562|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000084867|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]
rn6_v1_chr9_-_92616165_92616165	0.0348326	Hoxd9	ENSRNOT00000056995|Sp110|ENSRNOG00000033747|SP110 nuclear body protein [Source:RGD Symbol%3BAcc:1310173]
rn6_v1_chr9_+_95295701_95295701	0.0348273	Hoxd9	ENSRNOT00000025045|Ugt1a5|ENSRNOG00000018740|UDP glucuronosyltransferase family 1 member A5 [Source:RGD Symbol%3BAcc:1583689]
rn6_v1_chr13_-_56462834_56462834	0.0347582	Hoxd9	ENSRNOT00000032122|Crb1|ENSRNOG00000010903|crumbs 1%2C cell polarity complex component [Source:RGD Symbol%3BAcc:1309947]
rn6_v1_chr8_+_5606592_5606592	0.0338166	Hoxd9	ENSRNOT00000011727|Mmp12|ENSRNOG00000030187|matrix metallopeptidase 12 [Source:RGD Symbol%3BAcc:620195]
rn6_v1_chr18_+_65285318_65285318	0.0327125	Hoxd9	ENSRNOT00000020431|Tcf4|ENSRNOG00000012405|transcription factor 4 [Source:RGD Symbol%3BAcc:69271]
rn6_v1_chr2_+_54466280_54466280	0.0322032	Hoxd9	ENSRNOT00000033112|C6|ENSRNOG00000024115|complement C6 [Source:RGD Symbol%3BAcc:2238]
rn6_v1_chr4_+_33890349_33890349	0.0319895	Hoxd9	ENSRNOT00000078680|C1galt1|ENSRNOG00000007804|core 1 synthase%2C glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase%2C 1 [Source:RGD Symbol%3BAcc:621105]
rn6_v1_chrX_-_158288109_158288109	0.0318465	Hoxd9	ENSRNOT00000072527|LOC103690175|ENSRNOG00000048650|PHD finger protein 6 [Source:RGD Symbol%3BAcc:9471618]
rn6_v1_chrX_-_115073890_115073890	0.031059	Hoxd9	ENSRNOT00000006638|Capn6|ENSRNOG00000004882|calpain 6 [Source:RGD Symbol%3BAcc:70960]
rn6_v1_chr2_+_22910236_22910236	0.030647	Hoxd9	ENSRNOT00000078266|Homer1|ENSRNOG00000047014|homer scaffolding protein 1 [Source:RGD Symbol%3BAcc:628725]
rn6_v1_chr3_-_21904133_21904270	0.0304592	Hoxd9	ENSRNOT00000090576|Strbp|ENSRNOG00000010150|spermatid perinuclear RNA binding protein [Source:RGD Symbol%3BAcc:620673]	ENSRNOT00000087611|Strbp|ENSRNOG00000010150|spermatid perinuclear RNA binding protein [Source:RGD Symbol%3BAcc:620673]	ENSRNOT00000066377|Strbp|ENSRNOG00000010150|spermatid perinuclear RNA binding protein [Source:RGD Symbol%3BAcc:620673]
rn6_v1_chr2_-_252451999_252451999	0.0299881	Hoxd9	ENSRNOT00000021861|Dnase2b|ENSRNOG00000016262|deoxyribonuclease 2 beta [Source:RGD Symbol%3BAcc:70901]
rn6_v1_chr11_+_53140599_53140599	0.0284283	Hoxd9	ENSRNOT00000083438|Bbx|ENSRNOG00000001971|BBX%2C HMG-box containing [Source:RGD Symbol%3BAcc:1309769]
rn6_v1_chr9_+_111233147_111233147	0.0281441	Hoxd9	ENSRNOT00000056439|Ppip5k2|ENSRNOG00000011613|diphosphoinositol pentakisphosphate kinase 2 [Source:RGD Symbol%3BAcc:1590765]
rn6_v1_chr2_-_30458542_30458542	0.0280969	Hoxd9	ENSRNOT00000072926|Naip6|ENSRNOG00000033693|NLR family%2C apoptosis inhibitory protein 6 [Source:RGD Symbol%3BAcc:621281]
rn6_v1_chr1_+_21613148_21613148	0.0279913	Hoxd9	ENSRNOT00000018695|Enpp3|ENSRNOG00000013791|ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:RGD Symbol%3BAcc:708511]
rn6_v1_chr13_-_45040593_45040593	0.0271464	Hoxd9	ENSRNOT00000004908|Lct|ENSRNOG00000003681|lactase [Source:RGD Symbol%3BAcc:620823]
rn6_v1_chr1_-_22404002_22404002	0.0271241	Hoxd9	ENSRNOT00000044098|Taar8a|ENSRNOG00000030414|trace amine-associated receptor 8a [Source:RGD Symbol%3BAcc:631391]
rn6_v1_chr5_+_104698040_104698040	0.0266294	Hoxd9	ENSRNOT00000009127|Adamtsl1|ENSRNOG00000006956|ADAMTS-like 1 [Source:RGD Symbol%3BAcc:1306439]
rn6_v1_chr13_-_32427177_32427177	0.0259828	Hoxd9	ENSRNOT00000044628|Cdh19|ENSRNOG00000029841|cadherin 19 [Source:RGD Symbol%3BAcc:1307169]
rn6_v1_chr16_-_32421005_32421005	0.025795	Hoxd9	ENSRNOT00000082712|Nek1|ENSRNOG00000010418|NIMA-related kinase 1 [Source:RGD Symbol%3BAcc:1309375]
rn6_v1_chr4_-_28437676_28437676	0.025518	Hoxd9	ENSRNOT00000012995|Hepacam2|ENSRNOG00000009711|HEPACAM family member 2 [Source:RGD Symbol%3BAcc:1305697]
rn6_v1_chr6_+_97110158_97110158	0.0242021	Hoxd9	ENSRNOT00000088430|Syt16|ENSRNOG00000056012|synaptotagmin 16 [Source:RGD Symbol%3BAcc:1564654]
rn6_v1_chr3_-_72895740_72895740	0.0239685	Hoxd9	ENSRNOT00000012568|Fads2l1|ENSRNOG00000009399|fatty acid desaturase 2-like 1 [Source:RGD Symbol%3BAcc:1311224]
rn6_v1_chr1_+_22332090_22332090	0.023281	Hoxd9	ENSRNOT00000091252|AABR07000663.1|ENSRNOG00000056705|trace amine-associated receptor 8c (Taar8c)%2C mRNA [Source:RefSeq mRNA%3BAcc:NM_175600]
rn6_v1_chr5_-_147784311_147784311	0.0227049	Hoxd9	ENSRNOT00000074172|Fam167b|ENSRNOG00000049425|family with sequence similarity 167%2C member B [Source:RGD Symbol%3BAcc:1584589]
rn6_v1_chr1_+_22364551_22364551	0.0219532	Hoxd9	ENSRNOT00000043157|LOC108348200|ENSRNOG00000048934|trace amine-associated receptor 8a [Source:RGD Symbol%3BAcc:11501093]
rn6_v1_chr12_+_46042413_46042413	0.0216851	Hoxd9	ENSRNOT00000046882|Ccdc60|ENSRNOG00000032684|coiled-coil domain containing 60 [Source:RGD Symbol%3BAcc:1564283]
rn6_v1_chr3_-_24601063_24601063	0.0196704	Hoxd9	ENSRNOT00000037043|LOC100362366|ENSRNOG00000028690|40S ribosomal protein S17-like [Source:RGD Symbol%3BAcc:2318320]
rn6_v1_chr13_+_90116843_90116843	0.0191566	Hoxd9	ENSRNOT00000006306|Cd48|ENSRNOG00000004737|Cd48 molecule [Source:RGD Symbol%3BAcc:620620]
rn6_v1_chr8_+_36850324_36850324	0.0191523	Hoxd9	ENSRNOT00000060448|Pate2|ENSRNOG00000033981|prostate and testis expressed 2 [Source:RGD Symbol%3BAcc:2320100]
rn6_v1_chr8_-_14880644_14880644	0.0189416	Hoxd9	ENSRNOT00000015977|Fat3|ENSRNOG00000011585|FAT atypical cadherin 3 [Source:RGD Symbol%3BAcc:620657]
rn6_v1_chr4_+_183896303_183896303	0.0187926	Hoxd9	ENSRNOT00000055437|RGD1309621|ENSRNOG00000036913|similar to hypothetical protein FLJ10652 [Source:RGD Symbol%3BAcc:1309621]
rn6_v1_chr5_-_50138475_50138475	0.0185732	Hoxd9	ENSRNOT00000011969|Slc35a1|ENSRNOG00000008908|solute carrier family 35 member A1 [Source:RGD Symbol%3BAcc:1311359]
rn6_v1_chr9_+_93086012_93086012	0.0184294	Hoxd9	ENSRNOT00000089470|Psmd1|ENSRNOG00000017730|proteasome 26S subunit%2C non-ATPase 1 [Source:RGD Symbol%3BAcc:621669]
rn6_v1_chr4_-_13878126_13878126	0.0179952	Hoxd9	ENSRNOT00000007032|Gnat3|ENSRNOG00000005268|G protein subunit alpha transducin 3 [Source:RGD Symbol%3BAcc:727817]
rn6_v1_chr2_-_158156444_158156444	0.0177602	Hoxd9	ENSRNOT00000088559|Veph1|ENSRNOG00000012427|ventricular zone expressed PH domain-containing 1 [Source:RGD Symbol%3BAcc:1308217]
rn6_v1_chr19_+_683484_683484	0.0169163	Hoxd9	ENSRNOT00000090332|Terb1|ENSRNOG00000055097|telomere repeat binding bouquet formation protein 1 [Source:RGD Symbol%3BAcc:1310400]
rn6_v1_chr5_-_164502469_164502469	0.0167835	Hoxd9	ENSRNOT00000051887|RGD1565622|ENSRNOG00000033792|RGD1565622 [Source:RGD Symbol%3BAcc:1565622]
rn6_v1_chr4_-_101393329_101393329	0.0167187	Hoxd9	ENSRNOT00000007636|RGD1562515|ENSRNOG00000024604|similar to RIKEN cDNA 4931417E11 [Source:RGD Symbol%3BAcc:1562515]
rn6_v1_chr10_-_67478848_67478848	0.0163839	Hoxd9	ENSRNOT00000005325|Tefm|ENSRNOG00000004000|transcription elongation factor%2C mitochondrial [Source:RGD Symbol%3BAcc:1306595]
rn6_v1_chr17_+_69960160_69960160	0.0160141	Hoxd9	ENSRNOT00000023887|Ucn3|ENSRNOG00000017759|urocortin 3 [Source:RGD Symbol%3BAcc:1562213]
rn6_v1_chr7_+_35773928_35773928	0.0159931	Hoxd9	ENSRNOT00000034639|Cep83|ENSRNOG00000007859|centrosomal protein 83 [Source:RGD Symbol%3BAcc:1359593]
rn6_v1_chr1_-_90176105_90176105	0.015511	Hoxd9	ENSRNOT00000076419|RGD1308428|ENSRNOG00000021129|similar to RIKEN cDNA 4931406P16 [Source:RGD Symbol%3BAcc:1308428]
rn6_v1_chr10_-_87962846_87962846	0.0153517	Hoxd9	ENSRNOT00000018176|Krt31|ENSRNOG00000030344|keratin 31 [Source:RGD Symbol%3BAcc:1359411]
rn6_v1_chr17_+_81280898_81280898	0.0147469	Hoxd9	ENSRNOT00000057785|Tmem236|ENSRNOG00000037982|transmembrane protein 236 [Source:RGD Symbol%3BAcc:1590637]
rn6_v1_chrX_+_29520263_29520263	0.0140805	Hoxd9	ENSRNOT00000037047|Saxo1|ENSRNOG00000025637|stabilizer of axonemal microtubules 1 [Source:RGD Symbol%3BAcc:1549779]
rn6_v1_chr15_+_42489377_42489377	0.0139027	Hoxd9	ENSRNOT00000064306|Pbk|ENSRNOG00000015308|PDZ binding kinase [Source:RGD Symbol%3BAcc:1309565]
rn6_v1_chr1_+_51619875_51619875	0.0137903	Hoxd9	ENSRNOT00000023319|Pabpc6|ENSRNOG00000017367|poly(A) binding protein%2C cytoplasmic 6 [Source:RGD Symbol%3BAcc:1311201]
rn6_v1_chr7_+_122160171_122160171	0.0137783	Hoxd9	ENSRNOT00000074499|LOC100362980|ENSRNOG00000047506|CG3918-like [Source:RGD Symbol%3BAcc:2323713]
rn6_v1_chr18_+_31574821_31574821	0.0136278	Hoxd9	ENSRNOT00000018499|Ndfip1|ENSRNOG00000013562|Nedd4 family interacting protein 1 [Source:RGD Symbol%3BAcc:1310053]
rn6_v1_chr18_+_40596166_40596166	0.0135645	Hoxd9	ENSRNOT00000087984|Eif1a|ENSRNOG00000031421|eukaryotic translation initiation factor 1A [Source:RGD Symbol%3BAcc:1306331]
rn6_v1_chrX_+_32495809_32495809	0.0117133	Hoxd9	ENSRNOT00000020999|RGD1565844|ENSRNOG00000004120|similar to RIKEN cDNA 1700045I19 [Source:RGD Symbol%3BAcc:1565844]
rn6_v1_chr7_-_140437467_140437467	0.0116728	Hoxd9	ENSRNOT00000087181|Fkbp11|ENSRNOG00000054775|FK506 binding protein 11 [Source:RGD Symbol%3BAcc:1306161]
rn6_v1_chr3_+_121490812_121490812	0.0114832	Hoxd9	ENSRNOT00000023913|AABR07053707.1|ENSRNOG00000017740|
rn6_v1_chr11_-_61698595_61698595	0.0112354	Hoxd9	ENSRNOT00000093445|Ccdc191|ENSRNOG00000057815|coiled-coil domain containing 191 [Source:RGD Symbol%3BAcc:1566314]
rn6_v1_chr2_+_30347000_30347000	0.00971521	Hoxd9	ENSRNOT00000024291|Serf1|ENSRNOG00000017945|small EDRK-rich factor 1 [Source:RGD Symbol%3BAcc:1565105]
rn6_v1_chr3_-_46942966_46942966	0.00959759	Hoxd9	ENSRNOT00000087439|Rbms1|ENSRNOG00000008482|RNA binding motif%2C single stranded interacting protein 1 [Source:RGD Symbol%3BAcc:1307777]
rn6_v1_chr18_-_67224566_67224566	0.0095837	Hoxd9	ENSRNOT00000064947|Dcc|ENSRNOG00000033099|DCC netrin 1 receptor [Source:RGD Symbol%3BAcc:2492]
rn6_v1_chr2_+_252452269_252452269	0.00898617	Hoxd9	ENSRNOT00000021970|Uox|ENSRNOG00000016339|urate oxidase [Source:RGD Symbol%3BAcc:621369]
rn6_v1_chr8_+_59507990_59507990	0.00866182	Hoxd9	ENSRNOT00000018003|Hykk|ENSRNOG00000013419|hydroxylysine kinase [Source:RGD Symbol%3BAcc:1308677]
rn6_v1_chr13_+_78979321_78979321	0.00840925	Hoxd9	ENSRNOT00000003857|Ankrd45|ENSRNOG00000002890|ankyrin repeat domain 45 [Source:RGD Symbol%3BAcc:1311153]
rn6_v1_chr14_-_19132208_19132208	0.00825134	Hoxd9	ENSRNOT00000060535|Afm|ENSRNOG00000002878|afamin [Source:RGD Symbol%3BAcc:628614]
rn6_v1_chr13_-_72744295_72744303	0.00668165	Hoxd9	ENSRNOT00000093366|Ier5|ENSRNOG00000059406|immediate early response 5 [Source:RGD Symbol%3BAcc:69252]	ENSRNOT00000077157|Ier5|ENSRNOG00000059406|immediate early response 5 [Source:RGD Symbol%3BAcc:69252]
rn6_v1_chr8_+_133197032_133197032	0.00638683	Hoxd9	ENSRNOT00000075564|Ccr5|ENSRNOG00000049115|chemokine (C-C motif) receptor 5 [Source:RGD Symbol%3BAcc:620596]
rn6_v1_chr19_-_49448072_49448072	0.00605345	Hoxd9	ENSRNOT00000014997|Cmc2|ENSRNOG00000011279|C-x(9)-C motif containing 2 [Source:RGD Symbol%3BAcc:2324599]
rn6_v1_chr3_-_71845232_71845232	0.0059218	Hoxd9	ENSRNOT00000078645|Calcrl|ENSRNOG00000054695|calcitonin receptor like receptor [Source:RGD Symbol%3BAcc:2255]
rn6_v1_chr11_+_31539016_31539016	0.00560251	Hoxd9	ENSRNOT00000072856|Ifnar2|ENSRNOG00000045668|interferon alpha and beta receptor subunit 2 [Source:RGD Symbol%3BAcc:1583177]
rn6_v1_chr11_-_17684903_17684903	0.00541679	Hoxd9	ENSRNOT00000051213|Tmprss15|ENSRNOG00000001916|transmembrane protease%2C serine 15 [Source:RGD Symbol%3BAcc:1311046]
rn6_v1_chr3_-_15278645_15278645	0.00526221	Hoxd9	ENSRNOT00000032204|Ttll11|ENSRNOG00000019339|tubulin tyrosine ligase like11 [Source:RGD Symbol%3BAcc:1588742]
rn6_v1_chr17_-_14679409_14679409	0.00525311	Hoxd9	ENSRNOT00000020704|Aspn|ENSRNOG00000015410|asporin [Source:RGD Symbol%3BAcc:1549776]
rn6_v1_chr5_-_38923095_38923095	0.00515167	Hoxd9	ENSRNOT00000009146|AABR07047593.1|ENSRNOG00000006971|
rn6_v1_chr11_+_74834050_74834050	0.00476484	Hoxd9	ENSRNOT00000002333|Atp13a4|ENSRNOG00000001714|ATPase 13A4 [Source:RGD Symbol%3BAcc:1306927]
rn6_v1_chr4_-_2201749_2201749	0.00348599	Hoxd9	ENSRNOT00000089327|Lmbr1|ENSRNOG00000059589|limb development membrane protein 1 [Source:RGD Symbol%3BAcc:1563910]
rn6_v1_chr14_-_83412375_83412375	0.00260742	Hoxd9	ENSRNOT00000036848|Sfi1|ENSRNOG00000018412|SFI1 centrin binding protein [Source:RGD Symbol%3BAcc:1560636]
rn6_v1_chr7_+_38900593_38900593	0.00241379	Hoxd9	ENSRNOT00000072166|Epyc|ENSRNOG00000004717|epiphycan [Source:RGD Symbol%3BAcc:1305904]
rn6_v1_chr7_-_140213045_140213050	0.00151747	Hoxd9	ENSRNOT00000086886|LOC103690317|ENSRNOG00000060185|KAT8 regulatory NSL complex subunit 2 [Source:RGD Symbol%3BAcc:9332946]	ENSRNOT00000090730|LOC103690317|ENSRNOG00000060185|KAT8 regulatory NSL complex subunit 2 [Source:RGD Symbol%3BAcc:9332946]
rn6_v1_chr1_-_91588609_91588609	0.000849679	Hoxd9	ENSRNOT00000050931|Snrpg|ENSRNOG00000032232|small nuclear ribonucleoprotein polypeptide G [Source:RGD Symbol%3BAcc:1584713]
rn6_v1_chr3_+_138508899_138508899	0.000226069	Hoxd9	ENSRNOT00000009437|Kat14|ENSRNOG00000007160|lysine acetyltransferase 14 [Source:RGD Symbol%3BAcc:1309538]
