rn6_v1_chr1_-_145931583_145931583	0.170405	Mafa	ENSRNOT00000016433|Cfap161|ENSRNOG00000012301|cilia and flagella associated protein 161 [Source:RGD Symbol%3BAcc:1310371]
rn6_v1_chr10_+_14828597_14828597	0.159094	Mafa	ENSRNOT00000025434|Tekt4|ENSRNOG00000018792|tektin 4 [Source:RGD Symbol%3BAcc:1308075]
rn6_v1_chr15_+_50891127_50891127	0.132487	Mafa	ENSRNOT00000020728|Stc1|ENSRNOG00000015075|stanniocalcin 1 [Source:RGD Symbol%3BAcc:621776]
rn6_v1_chrX_-_111102464_111102464	0.128582	Mafa	ENSRNOT00000084176|Ripply1|ENSRNOG00000061101|ripply transcriptional repressor 1 [Source:RGD Symbol%3BAcc:1588264]
rn6_v1_chr10_-_46145548_46145548	0.124846	Mafa	ENSRNOT00000033483|Pld6|ENSRNOG00000021657|phospholipase D family%2C member 6 [Source:RGD Symbol%3BAcc:1311987]
rn6_v1_chr20_-_12938891_12938891	0.124821	Mafa	ENSRNOT00000017141|RGD1564149|ENSRNOG00000012714|similar to Protein C21orf58 [Source:RGD Symbol%3BAcc:1564149]
rn6_v1_chr2_-_187160373_187160373	0.0964689	Mafa	ENSRNOT00000018961|Ntrk1|ENSRNOG00000013953|neurotrophic receptor tyrosine kinase 1 [Source:RGD Symbol%3BAcc:620144]
rn6_v1_chr15_-_61873406_61873406	0.0932682	Mafa	ENSRNOT00000045115|LOC100360244|ENSRNOG00000029808|LRRGT00053-like [Source:RGD Symbol%3BAcc:2324592]
rn6_v1_chr6_+_102392828_102392828	0.0912906	Mafa	ENSRNOT00000089162|Rdh12|ENSRNOG00000056553|retinol dehydrogenase 12 (all-trans/9-cis/11-cis) [Source:RGD Symbol%3BAcc:1310462]
rn6_v1_chr1_-_254735548_254735548	0.090821	Mafa	ENSRNOT00000025258|Ankrd1|ENSRNOG00000018598|ankyrin repeat domain 1 [Source:RGD Symbol%3BAcc:61989]
rn6_v1_chr1_-_215858034_215858034	0.077218	Mafa	ENSRNOT00000027656|Ins2|ENSRNOG00000020405|insulin 2 [Source:RGD Symbol%3BAcc:2916]
rn6_v1_chr8_-_48774898_48774898	0.0756589	Mafa	ENSRNOT00000016303|Upk2|ENSRNOG00000043324|uroplakin 2 [Source:RGD Symbol%3BAcc:1597393]
rn6_v1_chr10_+_94170766_94170766	0.0728036	Mafa	ENSRNOT00000010627|Ace|ENSRNOG00000062101|angiotensin I converting enzyme [Source:RGD Symbol%3BAcc:2493]
rn6_v1_chr5_+_3955227_3955227	0.0662175	Mafa	ENSRNOT00000009908|Msc|ENSRNOG00000007540|musculin [Source:RGD Symbol%3BAcc:1305496]
rn6_v1_chr1_-_197770669_197770669	0.0653528	Mafa	ENSRNOT00000023563|Lat|ENSRNOG00000017429|linker for activation of T cells [Source:RGD Symbol%3BAcc:620802]
rn6_v1_chr1_+_245237736_245237736	0.0623062	Mafa	ENSRNOT00000035814|Vldlr|ENSRNOG00000027491|very low density lipoprotein receptor [Source:RGD Symbol%3BAcc:3963]
rn6_v1_chr8_+_32018560_32018560	0.0608312	Mafa	ENSRNOT00000007358|Adamts8|ENSRNOG00000005574|ADAM metallopeptidase with thrombospondin type 1 motif%2C 8 [Source:RGD Symbol%3BAcc:1308511]
rn6_v1_chr20_+_10438444_10438489	0.0586972	Mafa	ENSRNOT00000071248|Cryaa|ENSRNOG00000047175|crystallin%2C alpha A [Source:RGD Symbol%3BAcc:2413]	ENSRNOT00000075545|Cryaa|ENSRNOG00000047175|crystallin%2C alpha A [Source:RGD Symbol%3BAcc:2413]
rn6_v1_chr8_-_58542844_58542844	0.0578544	Mafa	ENSRNOT00000012041|Elmod1|ENSRNOG00000009054|ELMO domain containing 1 [Source:RGD Symbol%3BAcc:1564186]
rn6_v1_chr20_-_7930929_7930929	0.0575911	Mafa	ENSRNOT00000000607|Tead3|ENSRNOG00000000506|TEA domain transcription factor 3 [Source:RGD Symbol%3BAcc:1311583]
rn6_v1_chr2_-_26870421_26870421	0.0545879	Mafa	ENSRNOT00000088791|AABR07007744.2|ENSRNOG00000060714|
rn6_v1_chr1_-_224974203_224974203	0.0503857	Mafa	ENSRNOT00000065694|Tmem179b|ENSRNOG00000019341|transmembrane protein 179B [Source:RGD Symbol%3BAcc:1582850]
rn6_v1_chr2_-_27949066_27949089	0.0498469	Mafa	ENSRNOT00000081472|Nsa2|ENSRNOG00000016530|NSA2 ribosome biogenesis homolog [Source:RGD Symbol%3BAcc:621335]	ENSRNOT00000022138|Nsa2|ENSRNOG00000016530|NSA2 ribosome biogenesis homolog [Source:RGD Symbol%3BAcc:621335]
rn6_v1_chr10_+_83081168_83081168	0.0490005	Mafa	ENSRNOT00000035023|Tac4|ENSRNOG00000004404|tachykinin 4 (hemokinin) [Source:RGD Symbol%3BAcc:628842]
rn6_v1_chr3_-_60813869_60813869	0.0487866	Mafa	ENSRNOT00000058234|Atp5g3|ENSRNOG00000001596|ATP synthase%2C H+ transporting%2C mitochondrial Fo complex%2C subunit C3 (subunit 9) [Source:RGD Symbol%3BAcc:620052]
rn6_v1_chr11_+_17538063_17538115	0.0473518	Mafa	ENSRNOT00000031889|Chodl|ENSRNOG00000001915|chondrolectin [Source:RGD Symbol%3BAcc:1309885]	ENSRNOT00000090878|Chodl|ENSRNOG00000001915|chondrolectin [Source:RGD Symbol%3BAcc:1309885]
rn6_v1_chr15_+_45834302_45834302	0.0466701	Mafa	ENSRNOT00000051307|Serpine3|ENSRNOG00000009814|serpin family E member 3 [Source:RGD Symbol%3BAcc:1585042]
rn6_v1_chr8_-_107602263_107602263	0.0443411	Mafa	ENSRNOT00000017658|Esyt3|ENSRNOG00000022704|extended synaptotagmin 3 [Source:RGD Symbol%3BAcc:1561304]
rn6_v1_chrX_+_123913072_123913072	0.0401766	Mafa	ENSRNOT00000071376|Rhox5|ENSRNOG00000046548|reproductive homeobox 5 [Source:RGD Symbol%3BAcc:3295]
rn6_v1_chr5_+_26493212_26493212	0.0393956	Mafa	ENSRNOT00000061328|Triqk|ENSRNOG00000039924|triple QxxK/R motif containing [Source:RGD Symbol%3BAcc:1561260]
rn6_v1_chr1_-_87221826_87221892	0.0382749	Mafa	ENSRNOT00000046611|Spint2|ENSRNOG00000020636|serine peptidase inhibitor%2C Kunitz type%2C 2 [Source:RGD Symbol%3BAcc:735123]	ENSRNOT00000028006|Spint2|ENSRNOG00000020636|serine peptidase inhibitor%2C Kunitz type%2C 2 [Source:RGD Symbol%3BAcc:735123]
rn6_v1_chr10_+_73333119_73333119	0.0377075	Mafa	ENSRNOT00000004736|Tbx4|ENSRNOG00000003544|T-box 4 [Source:RGD Symbol%3BAcc:1309057]
rn6_v1_chr3_-_117766120_117766120	0.0367852	Mafa	ENSRNOT00000056022|Fbn1|ENSRNOG00000007302|fibrillin 1 [Source:RGD Symbol%3BAcc:620908]
rn6_v1_chrX_+_17823554_17823554	0.0360199	Mafa	ENSRNOT00000004118|Mycs|ENSRNOG00000003085|myc-like oncogene%2C s-myc protein [Source:RGD Symbol%3BAcc:3133]
rn6_v1_chr19_-_37525762_37525762	0.0356564	Mafa	ENSRNOT00000023606|Atp6v0d1|ENSRNOG00000017235|ATPase H+ transporting V0 subunit D1 [Source:RGD Symbol%3BAcc:1306159]
rn6_v1_chr19_-_11341863_11341863	0.031893	Mafa	ENSRNOT00000025694|Mt4|ENSRNOG00000019004|metallothionein 4 [Source:RGD Symbol%3BAcc:1565500]
rn6_v1_chr4_+_7282948_7282948	0.0312735	Mafa	ENSRNOT00000011052|Cdk5|ENSRNOG00000008017|cyclin-dependent kinase 5 [Source:RGD Symbol%3BAcc:70514]
rn6_v1_chr18_+_65814026_65814026	0.0306288	Mafa	ENSRNOT00000016112|Mbd2|ENSRNOG00000011853|methyl-CpG binding domain protein 2 [Source:RGD Symbol%3BAcc:1595452]
rn6_v1_chr3_-_7203420_7203420	0.0297933	Mafa	ENSRNOT00000015236|Gfi1b|ENSRNOG00000011353|growth factor independent 1B transcriptional repressor [Source:RGD Symbol%3BAcc:1311727]
rn6_v1_chr6_-_12554439_12554439	0.02928	Mafa	ENSRNOT00000022481|Lhcgr|ENSRNOG00000016712|luteinizing hormone/choriogonadotropin receptor [Source:RGD Symbol%3BAcc:3007]
rn6_v1_chr20_-_11556312_11556312	0.0281754	Mafa	ENSRNOT00000091856|RGD1561557|ENSRNOG00000060674|similar to chromosome 21 open reading frame 29 [Source:RGD Symbol%3BAcc:1561557]
rn6_v1_chr15_+_61873056_61873056	0.0280015	Mafa	ENSRNOT00000017086|Sugt1|ENSRNOG00000012594|SGT1 homolog%2C MIS12 kinetochore complex assembly cochaperone [Source:RGD Symbol%3BAcc:1307550]
rn6_v1_chr1_-_101741441_101741441	0.0276636	Mafa	ENSRNOT00000028570|Sult2b1|ENSRNOG00000021046|sulfotransferase family 2B member 1 [Source:RGD Symbol%3BAcc:1308882]
rn6_v1_chrX_-_10413984_10413995	0.0274564	Mafa	ENSRNOT00000039551|Ddx3x|ENSRNOG00000023383|DEAD-box helicase 3%2C X-linked [Source:RGD Symbol%3BAcc:1564771]	ENSRNOT00000091448|Ddx3x|ENSRNOG00000023383|DEAD-box helicase 3%2C X-linked [Source:RGD Symbol%3BAcc:1564771]
rn6_v1_chr17_-_15478343_15478343	0.0262496	Mafa	ENSRNOT00000078029|Omd|ENSRNOG00000039560|osteomodulin [Source:RGD Symbol%3BAcc:621818]
rn6_v1_chrX_-_115908693_115908693	0.0259708	Mafa	ENSRNOT00000091423|Trpc5|ENSRNOG00000027233|transient receptor potential cation channel%2C subfamily C%2C member 5 [Source:RGD Symbol%3BAcc:619787]
rn6_v1_chr20_-_21689553_21689553	0.0257513	Mafa	ENSRNOT00000038095|Tmem26|ENSRNOG00000027859|transmembrane protein 26 [Source:RGD Symbol%3BAcc:1309273]
rn6_v1_chr17_-_14637832_14637832	0.0251076	Mafa	ENSRNOT00000074323|LOC103690116|ENSRNOG00000046658|osteomodulin [Source:RGD Symbol%3BAcc:9400356]
rn6_v1_chr8_+_132828091_132828091	0.0242347	Mafa	ENSRNOT00000008269|Ccr9|ENSRNOG00000006311|C-C motif chemokine receptor 9 [Source:RGD Symbol%3BAcc:628750]
rn6_v1_chr7_+_4951747_4951747	0.0242166	Mafa	ENSRNOT00000061482|AABR07055527.1|ENSRNOG00000039997|
rn6_v1_chr13_-_74276964_74276964	0.0241375	Mafa	ENSRNOT00000005726|Tor3a|ENSRNOG00000004307|torsin family 3%2C member A [Source:RGD Symbol%3BAcc:1310101]
rn6_v1_chr1_-_52495582_52495582	0.0219155	Mafa	ENSRNOT00000067142|Pde10a|ENSRNOG00000011310|phosphodiesterase 10A [Source:RGD Symbol%3BAcc:68434]
rn6_v1_chrX_+_156911345_156911345	0.0209008	Mafa	ENSRNOT00000080945|L1cam|ENSRNOG00000061230|L1 cell adhesion molecule [Source:RGD Symbol%3BAcc:619777]
rn6_v1_chrX_-_62903530_62903554	0.0200876	Mafa	ENSRNOT00000076652|Pdk3|ENSRNOG00000012513|pyruvate dehydrogenase kinase 3 [Source:RGD Symbol%3BAcc:1593276]	ENSRNOT00000017370|Pdk3|ENSRNOG00000012513|pyruvate dehydrogenase kinase 3 [Source:RGD Symbol%3BAcc:1593276]
rn6_v1_chr9_-_65693822_65693822	0.0171733	Mafa	ENSRNOT00000038431|Als2cr12|ENSRNOG00000024917|amyotrophic lateral sclerosis 2 chromosome region%2C candidate 12 [Source:RGD Symbol%3BAcc:1359362]
rn6_v1_chr4_-_144318580_144318580	0.0171166	Mafa	ENSRNOT00000007591|Ssuh2|ENSRNOG00000005734|ssu-2 homolog [Source:RGD Symbol%3BAcc:1562010]
rn6_v1_chr13_-_25262469_25262469	0.0158759	Mafa	ENSRNOT00000019921|Rnf152|ENSRNOG00000014859|ring finger protein 152 [Source:RGD Symbol%3BAcc:1305251]
rn6_v1_chr18_+_30172740_30172740	0.015484	Mafa	ENSRNOT00000027340|Pcdha4|ENSRNOG00000020119|protocadherin alpha 4 [Source:RGD Symbol%3BAcc:620337]
rn6_v1_chr18_+_44810388_44810472	0.0152558	Mafa	ENSRNOT00000021646|Hsd17b4|ENSRNOG00000015840|hydroxysteroid (17-beta) dehydrogenase 4 [Source:RGD Symbol%3BAcc:621806]	ENSRNOT00000089750|Hsd17b4|ENSRNOG00000015840|hydroxysteroid (17-beta) dehydrogenase 4 [Source:RGD Symbol%3BAcc:621806]
rn6_v1_chr1_-_167210919_167210919	0.0147119	Mafa	ENSRNOT00000027507|Chrna10|ENSRNOG00000020293|cholinergic receptor nicotinic alpha 10 subunit [Source:RGD Symbol%3BAcc:620142]
rn6_v1_chr13_+_63526486_63526486	0.0140364	Mafa	ENSRNOT00000003788|Brinp3|ENSRNOG00000002811|BMP/retinoic acid inducible neural specific 3 [Source:RGD Symbol%3BAcc:708421]
rn6_v1_chr10_+_53818818_53818818	0.0134921	Mafa	ENSRNOT00000057260|Myh8|ENSRNOG00000050042|myosin heavy chain 8 [Source:RGD Symbol%3BAcc:620356]
rn6_v1_chr10_+_89174684_89174684	0.0130989	Mafa	ENSRNOT00000043754|Vps25|ENSRNOG00000051179|vacuolar protein sorting 25 [Source:RGD Symbol%3BAcc:1584685]
rn6_v1_chr9_+_16543688_16543688	0.0128793	Mafa	ENSRNOT00000021868|Cnpy3|ENSRNOG00000016315|canopy FGF signaling regulator 3 [Source:RGD Symbol%3BAcc:1597709]
rn6_v1_chr5_-_13097341_13097341	0.0127568	Mafa	ENSRNOT00000061884|Rb1cc1|ENSRNOG00000006833|RB1-inducible coiled-coil 1 [Source:RGD Symbol%3BAcc:1309346]
rn6_v1_chrX_+_105134498_105134498	0.0122341	Mafa	ENSRNOT00000002058|Tmem35|ENSRNOG00000001506|transmembrane protein 35 [Source:RGD Symbol%3BAcc:1303093]
rn6_v1_chr12_+_11215886_11215893	0.0107346	Mafa	ENSRNOT00000076896|Ptcd1|ENSRNOG00000000987|pentatricopeptide repeat domain 1 [Source:RGD Symbol%3BAcc:1311473]	ENSRNOT00000060924|Ptcd1|ENSRNOG00000000987|pentatricopeptide repeat domain 1 [Source:RGD Symbol%3BAcc:1311473]
rn6_v1_chr9_-_45505767_45505767	0.0104197	Mafa	ENSRNOT00000033964|Lonrf2|ENSRNOG00000023312|LON peptidase N-terminal domain and ring finger 2 [Source:RGD Symbol%3BAcc:1562137]
rn6_v1_chr3_+_171213936_171213936	0.0103932	Mafa	ENSRNOT00000031586|Pck1|ENSRNOG00000028616|phosphoenolpyruvate carboxykinase 1 [Source:RGD Symbol%3BAcc:3267]
rn6_v1_chr14_+_114126943_114127025	0.0100839	Mafa	ENSRNOT00000041638|Rtn4|ENSRNOG00000004621|reticulon 4 [Source:RGD Symbol%3BAcc:620989]	ENSRNOT00000006443|Rtn4|ENSRNOG00000004621|reticulon 4 [Source:RGD Symbol%3BAcc:620989]	ENSRNOT00000006957|Rtn4|ENSRNOG00000004621|reticulon 4 [Source:RGD Symbol%3BAcc:620989]
rn6_v1_chr1_-_213987053_213987053	0.0099074	Mafa	ENSRNOT00000072774|LOC100911519|ENSRNOG00000049179|p53-induced protein with a death domain-like [Source:RGD Symbol%3BAcc:6492303]
rn6_v1_chr12_-_22726982_22726982	0.00789388	Mafa	ENSRNOT00000001921|Plod3|ENSRNOG00000001417|procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3 [Source:RGD Symbol%3BAcc:631339]
rn6_v1_chr7_-_124423832_124423832	0.00676741	Mafa	ENSRNOT00000013994|Mcat|ENSRNOG00000010539|malonyl-CoA-acyl carrier protein transacylase [Source:RGD Symbol%3BAcc:1306698]
rn6_v1_chr4_+_57715946_57716048	0.00292226	Mafa	ENSRNOT00000079059|Klhdc10|ENSRNOG00000010267|kelch domain containing 10 [Source:RGD Symbol%3BAcc:1309792]	ENSRNOT00000034429|Klhdc10|ENSRNOG00000010267|kelch domain containing 10 [Source:RGD Symbol%3BAcc:1309792]
rn6_v1_chr1_+_199225100_199225100	0.00204605	Mafa	ENSRNOT00000088606|Setd1a|ENSRNOG00000055028|SET domain containing 1A [Source:RGD Symbol%3BAcc:1311624]
rn6_v1_chr10_+_89181180_89181253	0.000602219	Mafa	ENSRNOT00000078931|Wnk4|ENSRNOG00000020441|WNK lysine deficient protein kinase 4 [Source:RGD Symbol%3BAcc:631401]	ENSRNOT00000027770|Wnk4|ENSRNOG00000020441|WNK lysine deficient protein kinase 4 [Source:RGD Symbol%3BAcc:631401]
rn6_v1_chr1_-_225128740_225128740	0.000516312	Mafa	ENSRNOT00000026897|Rom1|ENSRNOG00000019858|retinal outer segment membrane protein 1 [Source:RGD Symbol%3BAcc:1306070]
rn6_v1_chr12_+_46615649_46615704	0.000512094	Mafa	ENSRNOT00000086531|Bicdl1|ENSRNOG00000056955|BICD family like cargo adaptor 1 [Source:RGD Symbol%3BAcc:1310292]	ENSRNOT00000089494|Bicdl1|ENSRNOG00000056955|BICD family like cargo adaptor 1 [Source:RGD Symbol%3BAcc:1310292]
rn6_v1_chr5_-_58113553_58113553	0.000187065	Mafa	ENSRNOT00000046589|Arid3c|ENSRNOG00000013416|AT-rich interaction domain 3C [Source:RGD Symbol%3BAcc:1560943]
rn6_v1_chr10_-_88677055_88677055	0.000107152	Mafa	ENSRNOT00000025590|Ghdc|ENSRNOG00000018906|GH3 domain containing [Source:RGD Symbol%3BAcc:1308881]
