rn6_v1_chr3_+_123106694_123106694	0.255293	Nanog	ENSRNOT00000028829|Oxt|ENSRNOG00000021225|oxytocin/neurophysin 1 prepropeptide [Source:RGD Symbol%3BAcc:3238]
rn6_v1_chr4_+_171250818_171250818	0.136873	Nanog	ENSRNOT00000040576|Ptpro|ENSRNOG00000006231|protein tyrosine phosphatase%2C receptor type%2C O [Source:RGD Symbol%3BAcc:62068]
rn6_v1_chr1_+_87066289_87066289	0.0999551	Nanog	ENSRNOT00000027645|Capn12|ENSRNOG00000020389|calpain 12 [Source:RGD Symbol%3BAcc:1307341]
rn6_v1_chr8_+_72743426_72743426	0.0947364	Nanog	ENSRNOT00000072573|Rps27l|ENSRNOG00000050473|ribosomal protein S27-like [Source:RGD Symbol%3BAcc:1595396]
rn6_v1_chr2_+_187447501_187447501	0.0912985	Nanog	ENSRNOT00000038589|Iqgap3|ENSRNOG00000027894|IQ motif containing GTPase activating protein 3 [Source:RGD Symbol%3BAcc:1305951]
rn6_v1_chr1_-_168972725_168972725	0.08804	Nanog	ENSRNOT00000090422|Hbb|ENSRNOG00000058105|hemoglobin subunit beta [Source:RGD Symbol%3BAcc:2783]
rn6_v1_chr4_-_178168690_178168690	0.0842978	Nanog	ENSRNOT00000020729|Sox5|ENSRNOG00000027869|SRY box 5 [Source:RGD Symbol%3BAcc:620471]
rn6_v1_chr3_+_44025300_44025300	0.0792133	Nanog	ENSRNOT00000006319|Galnt5|ENSRNOG00000004645|polypeptide N-acetylgalactosaminyltransferase 5 [Source:RGD Symbol%3BAcc:620361]
rn6_v1_chr2_-_138833933_138833933	0.0760636	Nanog	ENSRNOT00000013343|Pcdh18|ENSRNOG00000009949|protocadherin 18 [Source:RGD Symbol%3BAcc:1305870]
rn6_v1_chrX_-_138148967_138148967	0.0753694	Nanog	ENSRNOT00000033968|Frmd7|ENSRNOG00000024762|FERM domain containing 7 [Source:RGD Symbol%3BAcc:1562057]
rn6_v1_chr7_-_143497108_143497108	0.0753358	Nanog	ENSRNOT00000048613|Krt76|ENSRNOG00000031785|keratin 76 [Source:RGD Symbol%3BAcc:1303078]
rn6_v1_chr5_+_144031402_144031402	0.0745953	Nanog	ENSRNOT00000011694|Csf3r|ENSRNOG00000008759|colony stimulating factor 3 receptor [Source:RGD Symbol%3BAcc:1309114]
rn6_v1_chr7_-_28715224_28715224	0.0732688	Nanog	ENSRNOT00000065899|Parpbp|ENSRNOG00000004682|PARP1 binding protein [Source:RGD Symbol%3BAcc:2314264]
rn6_v1_chr19_+_14345993_14345993	0.0730631	Nanog	ENSRNOT00000084913|Gm18025|ENSRNOG00000030174|predicted gene%2C 18025 [Source:MGI Symbol%3BAcc:MGI:5010210]
rn6_v1_chr9_+_20241062_20241062	0.07191	Nanog	ENSRNOT00000071593|LOC100911585|ENSRNOG00000047890|leucine-rich repeat-containing protein 23-like [Source:RGD Symbol%3BAcc:6491966]
rn6_v1_chr5_-_136098013_136098013	0.0708135	Nanog	ENSRNOT00000089166|RGD1563714|ENSRNOG00000031494|RGD1563714 [Source:RGD Symbol%3BAcc:1563714]
rn6_v1_chr9_+_81644355_81644355	0.0623266	Nanog	ENSRNOT00000071700|Catip|ENSRNOG00000037835|ciliogenesis associated TTC17 interacting protein [Source:RGD Symbol%3BAcc:1596071]
rn6_v1_chr17_-_51912496_51912496	0.0602839	Nanog	ENSRNOT00000019272|Inhba|ENSRNOG00000014320|inhibin beta A subunit [Source:RGD Symbol%3BAcc:62074]
rn6_v1_chr2_+_208750356_208750356	0.0583352	Nanog	ENSRNOT00000041562|Chia|ENSRNOG00000033162|chitinase%2C acidic [Source:RGD Symbol%3BAcc:1303058]
rn6_v1_chr18_+_81694808_81694808	0.0581893	Nanog	ENSRNOT00000020446|Cyb5a|ENSRNOG00000015205|cytochrome b5 type A [Source:RGD Symbol%3BAcc:620558]
rn6_v1_chr15_+_12827707_12827707	0.0569985	Nanog	ENSRNOT00000012452|Fezf2|ENSRNOG00000009206|Fez family zinc finger 2 [Source:RGD Symbol%3BAcc:1311068]
rn6_v1_chr8_+_39687269_39687269	0.0569695	Nanog	ENSRNOT00000012060|Tmem218|ENSRNOG00000008757|transmembrane protein 218 [Source:RGD Symbol%3BAcc:1311364]
rn6_v1_chr1_+_91363492_91363492	0.0569547	Nanog	ENSRNOT00000014517|Cebpa|ENSRNOG00000010918|CCAAT/enhancer binding protein alpha [Source:RGD Symbol%3BAcc:2326]
rn6_v1_chr3_+_150761329_150761329	0.0543763	Nanog	ENSRNOT00000067854|Dynlrb1|ENSRNOG00000025715|dynein light chain roadblock-type 1 [Source:RGD Symbol%3BAcc:619910]
rn6_v1_chr4_-_170912629_170912629	0.0507741	Nanog	ENSRNOT00000055691|Erp27|ENSRNOG00000005787|endoplasmic reticulum protein 27 [Source:RGD Symbol%3BAcc:1565381]
rn6_v1_chr2_+_54466280_54466280	0.0506313	Nanog	ENSRNOT00000033112|C6|ENSRNOG00000024115|complement C6 [Source:RGD Symbol%3BAcc:2238]
rn6_v1_chr3_+_100768637_100768637	0.0506197	Nanog	ENSRNOT00000083542|Bdnf|ENSRNOG00000047466|brain-derived neurotrophic factor [Source:RGD Symbol%3BAcc:2202]
rn6_v1_chr10_-_15098791_15098791	0.0499638	Nanog	ENSRNOT00000026139|Chtf18|ENSRNOG00000019174|chromosome transmission fidelity factor 18 [Source:RGD Symbol%3BAcc:1310473]
rn6_v1_chr1_-_216663720_216663721	0.0497904	Nanog	ENSRNOT00000078944|Cdkn1c|ENSRNOG00000059500|cyclin-dependent kinase inhibitor 1C [Source:RGD Symbol%3BAcc:727892]	ENSRNOT00000077409|Cdkn1c|ENSRNOG00000059500|cyclin-dependent kinase inhibitor 1C [Source:RGD Symbol%3BAcc:727892]
rn6_v1_chr7_+_77066955_77066955	0.0491654	Nanog	ENSRNOT00000008700|Odf1|ENSRNOG00000006578|outer dense fiber of sperm tails 1 [Source:RGD Symbol%3BAcc:3228]
rn6_v1_chr17_-_78735324_78735324	0.0488458	Nanog	ENSRNOT00000036299|Cdnf|ENSRNOG00000026493|cerebral dopamine neurotrophic factor [Source:RGD Symbol%3BAcc:1307600]
rn6_v1_chr7_-_54855557_54855557	0.0481576	Nanog	ENSRNOT00000039475|Glipr1l1|ENSRNOG00000026634|GLI pathogenesis-related 1 like 1 [Source:RGD Symbol%3BAcc:1563000]
rn6_v1_chr19_-_10450186_10450186	0.0481386	Nanog	ENSRNOT00000088048|Adgrg1|ENSRNOG00000014963|adhesion G protein-coupled receptor G1 [Source:RGD Symbol%3BAcc:628617]
rn6_v1_chrX_+_13441558_13441558	0.0467022	Nanog	ENSRNOT00000030170|RGD1561661|ENSRNOG00000023094|similar to Ferritin light chain (Ferritin L subunit) [Source:RGD Symbol%3BAcc:1561661]
rn6_v1_chr3_-_161294125_161294125	0.0465958	Nanog	ENSRNOT00000021143|Spata25|ENSRNOG00000015744|spermatogenesis associated 25 [Source:RGD Symbol%3BAcc:1564523]
rn6_v1_chr6_-_47904163_47904163	0.0463907	Nanog	ENSRNOT00000011333|Rps7|ENSRNOG00000008551|ribosomal protein S7 [Source:RGD Symbol%3BAcc:61907]
rn6_v1_chr10_-_89005213_89005213	0.0455239	Nanog	ENSRNOT00000027159|Psmc3ip|ENSRNOG00000020022|PSMC3 interacting protein [Source:RGD Symbol%3BAcc:621885]
rn6_v1_chr17_-_42031265_42031265	0.045223	Nanog	ENSRNOT00000068021|Dcdc2|ENSRNOG00000017511|doublecortin domain containing 2 [Source:RGD Symbol%3BAcc:1310227]
rn6_v1_chr10_+_89635675_89635675	0.0452097	Nanog	ENSRNOT00000028179|RGD1561590|ENSRNOG00000020771|similar to SAP18 [Source:RGD Symbol%3BAcc:1561590]
rn6_v1_chr3_+_138174054_138174054	0.0442313	Nanog	ENSRNOT00000007946|Banf2|ENSRNOG00000006032|barrier to autointegration factor 2 [Source:RGD Symbol%3BAcc:1307909]
rn6_v1_chr7_+_140054592_140054592	0.0412963	Nanog	ENSRNOT00000014337|Olr1108|ENSRNOG00000010804|olfactory receptor 1108 [Source:RGD Symbol%3BAcc:1333018]
rn6_v1_chrX_-_142164220_142164220	0.0411563	Nanog	ENSRNOT00000064780|Fgf13|ENSRNOG00000042753|fibroblast growth factor 13 [Source:RGD Symbol%3BAcc:620164]
rn6_v1_chr2_-_219262901_219262901	0.0408952	Nanog	ENSRNOT00000037068|Gpr88|ENSRNOG00000026953|G-protein coupled receptor 88 [Source:RGD Symbol%3BAcc:61921]
rn6_v1_chrM_+_5323_5323	0.0407174	Nanog	ENSRNOT00000050156|Mt-co1|ENSRNOG00000034234|mitochondrially encoded cytochrome c oxidase 1 [Source:RGD Symbol%3BAcc:621871]
rn6_v1_chr10_+_59566223_59566268	0.040454	Nanog	ENSRNOT00000024068|P2rx1|ENSRNOG00000017606|purinergic receptor P2X 1 [Source:RGD Symbol%3BAcc:3240]	ENSRNOT00000088245|P2rx1|ENSRNOG00000017606|purinergic receptor P2X 1 [Source:RGD Symbol%3BAcc:3240]
rn6_v1_chr20_+_27592379_27592379	0.0403971	Nanog	ENSRNOT00000047000|Trappc3l|ENSRNOG00000031290|trafficking protein particle complex 3-like [Source:RGD Symbol%3BAcc:2318506]
rn6_v1_chr7_-_143228060_143228060	0.0401641	Nanog	ENSRNOT00000088923|Krt75|ENSRNOG00000043203|keratin 75 [Source:RGD Symbol%3BAcc:1359576]	ENSRNOT00000012640|Krt75|ENSRNOG00000043203|keratin 75 [Source:RGD Symbol%3BAcc:1359576]
rn6_v1_chr16_+_2706428_2706428	0.0397748	Nanog	ENSRNOT00000077117|Il17rd|ENSRNOG00000021966|interleukin 17 receptor D [Source:RGD Symbol%3BAcc:1565237]
rn6_v1_chrX_+_123751293_123751293	0.039474	Nanog	ENSRNOT00000089883|Nkap|ENSRNOG00000053813|NFKB activating protein [Source:RGD Symbol%3BAcc:1565955]
rn6_v1_chrX_-_115496045_115496045	0.0392168	Nanog	ENSRNOT00000051134|LOC100361854|ENSRNOG00000029512|ribosomal protein S26-like [Source:RGD Symbol%3BAcc:2319323]
rn6_v1_chr7_+_112057030_112057030	0.0388823	Nanog	ENSRNOT00000035216|AABR07058366.1|ENSRNOG00000025046|
rn6_v1_chr9_-_55673704_55673829	0.0385806	Nanog	ENSRNOT00000066231|Tmeff2|ENSRNOG00000016623|transmembrane protein with EGF-like and two follistatin-like domains 2 [Source:RGD Symbol%3BAcc:1308839]	ENSRNOT00000081677|Tmeff2|ENSRNOG00000016623|transmembrane protein with EGF-like and two follistatin-like domains 2 [Source:RGD Symbol%3BAcc:1308839]
rn6_v1_chr6_+_132551394_132551394	0.0382965	Nanog	ENSRNOT00000019583|Evl|ENSRNOG00000014476|Enah/Vasp-like [Source:RGD Symbol%3BAcc:621150]
rn6_v1_chr2_-_244370983_244370983	0.0382737	Nanog	ENSRNOT00000021458|Rap1gds1|ENSRNOG00000015987|Rap1 GTPase-GDP dissociation stimulator 1 [Source:RGD Symbol%3BAcc:1308558]
rn6_v1_chr10_-_87541851_87541851	0.0381704	Nanog	ENSRNOT00000089610|RGD1561684|ENSRNOG00000061130|similar to keratin associated protein 2-4 [Source:RGD Symbol%3BAcc:1561684]
rn6_v1_chrX_-_106607352_106607352	0.0366908	Nanog	ENSRNOT00000082858|AABR07040624.1|ENSRNOG00000058183|
rn6_v1_chrX_+_105147534_105147534	0.0365658	Nanog	ENSRNOT00000046288|Cenpi|ENSRNOG00000033335|centromere protein I [Source:RGD Symbol%3BAcc:2631]
rn6_v1_chr10_+_105498728_105498728	0.0360592	Nanog	ENSRNOT00000032163|Sphk1|ENSRNOG00000010626|sphingosine kinase 1 [Source:RGD Symbol%3BAcc:620048]
rn6_v1_chr20_+_5374985_5374985	0.0360116	Nanog	ENSRNOT00000052270|RT1-A2|ENSRNOG00000030712|RT1 class Ia%2C locus A2 [Source:RGD Symbol%3BAcc:1595923]
rn6_v1_chr1_+_82473737_82473737	0.0359057	Nanog	ENSRNOT00000028029|B9d2|ENSRNOG00000028753|B9 protein domain 2 [Source:RGD Symbol%3BAcc:1566122]
rn6_v1_chr7_+_24939498_24939498	0.0358438	Nanog	ENSRNOT00000010601|Ckap4|ENSRNOG00000008016|cytoskeleton-associated protein 4 [Source:RGD Symbol%3BAcc:1311989]
rn6_v1_chr10_+_45297937_45297937	0.0354947	Nanog	ENSRNOT00000066367|Trim17|ENSRNOG00000022983|tripartite motif-containing 17 [Source:RGD Symbol%3BAcc:69290]
rn6_v1_chr9_-_82336806_82336806	0.0354596	Nanog	ENSRNOT00000024667|Slc23a3|ENSRNOG00000018266|solute carrier family 23%2C member 3 [Source:RGD Symbol%3BAcc:1307402]
rn6_v1_chr14_-_21709084_21709084	0.0352701	Nanog	ENSRNOT00000087477|Smr3b|ENSRNOG00000001942|submaxillary gland androgen regulated protein 3B [Source:RGD Symbol%3BAcc:3953]
rn6_v1_chrX_+_123751089_123751089	0.0352234	Nanog	ENSRNOT00000092384|Nkap|ENSRNOG00000053813|NFKB activating protein [Source:RGD Symbol%3BAcc:1565955]
rn6_v1_chr2_+_189609800_189609800	0.0349255	Nanog	ENSRNOT00000089016|Slc39a1|ENSRNOG00000059463|solute carrier family 39 member 1 [Source:RGD Symbol%3BAcc:1305241]
rn6_v1_chr8_-_115145810_115145810	0.0346901	Nanog	ENSRNOT00000079470|Abhd14a|ENSRNOG00000011936|abhydrolase domain containing 14A [Source:RGD Symbol%3BAcc:1309721]
rn6_v1_chr1_-_178367828_178367828	0.0346482	Nanog	ENSRNOT00000050823|AABR07071968.1|ENSRNOG00000033924|
rn6_v1_chr2_+_208749996_208749996	0.0344625	Nanog	ENSRNOT00000086321|Chia|ENSRNOG00000033162|chitinase%2C acidic [Source:RGD Symbol%3BAcc:1303058]
rn6_v1_chr1_-_255557055_255557055	0.0341408	Nanog	ENSRNOT00000033780|Fgfbp3|ENSRNOG00000022796|fibroblast growth factor binding protein 3 [Source:RGD Symbol%3BAcc:1560326]
rn6_v1_chr5_+_139038134_139038134	0.0338573	Nanog	ENSRNOT00000078155|Hivep3|ENSRNOG00000009341|human immunodeficiency virus type I enhancer binding protein 3 [Source:RGD Symbol%3BAcc:1311252]
rn6_v1_chr5_-_115387377_115387413	0.0336823	Nanog	ENSRNOT00000036030|RGD1560146|ENSRNOG00000026169|similar to hypothetical protein MGC34837 [Source:RGD Symbol%3BAcc:1560146]	ENSRNOT00000077492|RGD1560146|ENSRNOG00000026169|similar to hypothetical protein MGC34837 [Source:RGD Symbol%3BAcc:1560146]
rn6_v1_chr7_+_34326087_34326087	0.0333223	Nanog	ENSRNOT00000006971|Hal|ENSRNOG00000004502|histidine ammonia lyase [Source:RGD Symbol%3BAcc:68363]
rn6_v1_chr4_-_155401480_155401480	0.0333148	Nanog	ENSRNOT00000020735|Apobec1|ENSRNOG00000015411|apolipoprotein B mRNA editing enzyme catalytic subunit 1 [Source:RGD Symbol%3BAcc:2133]
rn6_v1_chr1_+_247869756_247869756	0.0331686	Nanog	ENSRNOT00000054764|Mlana|ENSRNOG00000036608|melan-A [Source:RGD Symbol%3BAcc:1306525]
rn6_v1_chr14_+_23480462_23480462	0.0329386	Nanog	ENSRNOT00000002755|Gnrhr|ENSRNOG00000002011|gonadotropin releasing hormone receptor [Source:RGD Symbol%3BAcc:70513]
rn6_v1_chr1_+_170147300_170147300	0.0328022	Nanog	ENSRNOT00000048075|Olr200|ENSRNOG00000048852|olfactory receptor 200 [Source:RGD Symbol%3BAcc:1334048]
rn6_v1_chr2_-_250778269_250778323	0.0325207	Nanog	ENSRNOT00000085670|Clca5|ENSRNOG00000013334|chloride channel accessory 5 [Source:RGD Symbol%3BAcc:621100]	ENSRNOT00000083535|Clca5|ENSRNOG00000013334|chloride channel accessory 5 [Source:RGD Symbol%3BAcc:621100]	ENSRNOT00000017824|Clca5|ENSRNOG00000013334|chloride channel accessory 5 [Source:RGD Symbol%3BAcc:621100]
rn6_v1_chr7_+_29435444_29435444	0.0325182	Nanog	ENSRNOT00000008613|Slc5a8|ENSRNOG00000006367|solute carrier family 5 member 8 [Source:RGD Symbol%3BAcc:1564146]
rn6_v1_chr9_+_61552374_61552374	0.0322497	Nanog	ENSRNOT00000050090|Tmem258b|ENSRNOG00000032740|transmembrane protein 258 B [Source:RGD Symbol%3BAcc:1586604]
rn6_v1_chr4_+_110699557_110699686	0.0321616	Nanog	ENSRNOT00000030588|Lrrtm4|ENSRNOG00000021938|leucine rich repeat transmembrane neuronal 4 [Source:RGD Symbol%3BAcc:1560707]	ENSRNOT00000092261|Lrrtm4|ENSRNOG00000021938|leucine rich repeat transmembrane neuronal 4 [Source:RGD Symbol%3BAcc:1560707]
rn6_v1_chr10_+_34402482_34402482	0.0321117	Nanog	ENSRNOT00000072317|Tpcr12|ENSRNOG00000048210|putative olfactory receptor [Source:RGD Symbol%3BAcc:1589570]
rn6_v1_chr14_-_104612597_104612597	0.0318844	Nanog	ENSRNOT00000007002|Slc1a4|ENSRNOG00000005248|solute carrier family 1 member 4 [Source:RGD Symbol%3BAcc:735146]
rn6_v1_chr3_+_67849966_67849966	0.0312716	Nanog	ENSRNOT00000057826|Dusp19|ENSRNOG00000008868|dual specificity phosphatase 19 [Source:RGD Symbol%3BAcc:1307457]
rn6_v1_chr4_+_163174487_163174487	0.0312623	Nanog	ENSRNOT00000088108|Clec9a|ENSRNOG00000051690|C-type lectin domain family 9%2C member A [Source:RGD Symbol%3BAcc:1562513]
rn6_v1_chr20_+_26999795_26999795	0.0310888	Nanog	ENSRNOT00000057872|Mypn|ENSRNOG00000000383|myopalladin [Source:RGD Symbol%3BAcc:1308510]
rn6_v1_chr8_+_48699769_48699769	0.0310158	Nanog	ENSRNOT00000044613|Hyou1|ENSRNOG00000010944|hypoxia up-regulated 1 [Source:RGD Symbol%3BAcc:621146]
rn6_v1_chr7_-_136853957_136853957	0.0308253	Nanog	ENSRNOT00000008985|Nell2|ENSRNOG00000006235|neural EGFL like 2 [Source:RGD Symbol%3BAcc:620999]
rn6_v1_chr9_+_12740885_12740885	0.0304986	Nanog	ENSRNOT00000015210|Rftn1|ENSRNOG00000011321|raftlin lipid raft linker 1 [Source:RGD Symbol%3BAcc:1563347]
rn6_v1_chr19_-_10212050_10212050	0.0304894	Nanog	ENSRNOT00000082822|Tepp|ENSRNOG00000013465|testis%2C prostate and placenta expressed [Source:RGD Symbol%3BAcc:735198]
rn6_v1_chr6_+_8669722_8669722	0.0304254	Nanog	ENSRNOT00000048550|Camkmt|ENSRNOG00000030629|calmodulin-lysine N-methyltransferase [Source:RGD Symbol%3BAcc:1310453]
rn6_v1_chr9_+_27068443_27068443	0.0303415	Nanog	ENSRNOT00000017393|Efhc1|ENSRNOG00000042729|EF-hand domain containing 1 [Source:RGD Symbol%3BAcc:1587365]
rn6_v1_chr5_-_155709215_155709215	0.030319	Nanog	ENSRNOT00000018118|Cdc42|ENSRNOG00000013536|cell division cycle 42 [Source:RGD Symbol%3BAcc:71043]
rn6_v1_chr2_+_216863428_216863428	0.0302237	Nanog	ENSRNOT00000068413|Col11a1|ENSRNOG00000023148|collagen type XI alpha 1 chain [Source:RGD Symbol%3BAcc:2372]
rn6_v1_chr9_+_74124016_74124016	0.0302059	Nanog	ENSRNOT00000019023|Cps1|ENSRNOG00000013704|carbamoyl-phosphate synthase 1 [Source:RGD Symbol%3BAcc:2395]
rn6_v1_chr6_+_22696397_22696397	0.0301387	Nanog	ENSRNOT00000011630|Alk|ENSRNOG00000008683|anaplastic lymphoma receptor tyrosine kinase [Source:RGD Symbol%3BAcc:628622]
rn6_v1_chr3_+_72080630_72080630	0.030108	Nanog	ENSRNOT00000008911|Med19|ENSRNOG00000006050|mediator complex subunit 19 [Source:RGD Symbol%3BAcc:1311926]
rn6_v1_chrX_+_136466779_136466825	0.0297585	Nanog	ENSRNOT00000093268|Arhgap36|ENSRNOG00000007552|Rho GTPase activating protein 36 [Source:RGD Symbol%3BAcc:1565967]	ENSRNOT00000068717|Arhgap36|ENSRNOG00000007552|Rho GTPase activating protein 36 [Source:RGD Symbol%3BAcc:1565967]
rn6_v1_chr2_+_60461551_60461551	0.0297063	Nanog	ENSRNOT00000024557|Rad1|ENSRNOG00000018063|RAD1 checkpoint DNA exonuclease [Source:RGD Symbol%3BAcc:1306496]
rn6_v1_chr3_-_23020441_23020441	0.0297054	Nanog	ENSRNOT00000017651|Nr5a1|ENSRNOG00000012682|nuclear receptor subfamily 5%2C group A%2C member 1 [Source:RGD Symbol%3BAcc:68350]
rn6_v1_chr2_-_112831476_112831476	0.0296745	Nanog	ENSRNOT00000018055|Ect2|ENSRNOG00000024365|epithelial cell transforming 2 [Source:RGD Symbol%3BAcc:1308524]
rn6_v1_chr8_-_116391158_116391307	0.0296436	Nanog	ENSRNOT00000078720|Gnai2|ENSRNOG00000016592|G protein subunit alpha i2 [Source:RGD Symbol%3BAcc:620243]	ENSRNOT00000022550|Gnai2|ENSRNOG00000016592|G protein subunit alpha i2 [Source:RGD Symbol%3BAcc:620243]
rn6_v1_chr5_+_172364421_172364421	0.0295542	Nanog	ENSRNOT00000018769|Hes5|ENSRNOG00000013850|hes family bHLH transcription factor 5 [Source:RGD Symbol%3BAcc:621340]
rn6_v1_chr3_+_147511563_147511563	0.0290758	Nanog	ENSRNOT00000006828|Slc52a3|ENSRNOG00000005132|solute carrier family 52 member 3 [Source:RGD Symbol%3BAcc:1304644]
rn6_v1_chr20_+_4178686_4178686	0.0288073	Nanog	ENSRNOT00000080641|Tesb|ENSRNOG00000039398|testis specific basic protein [Source:RGD Symbol%3BAcc:1597063]
rn6_v1_chr19_-_27535792_27535792	0.0283595	Nanog	ENSRNOT00000024040|Olr1666|ENSRNOG00000017868|olfactory receptor 1666 [Source:RGD Symbol%3BAcc:1333226]
rn6_v1_chr1_-_1889236_1889236	0.028107	Nanog	ENSRNOT00000087944|AABR07000159.2|ENSRNOG00000053710|
rn6_v1_chr19_-_28645488_28645488	0.028029	Nanog	ENSRNOT00000044160|AABR07043449.1|ENSRNOG00000049468|
rn6_v1_chr9_+_43259709_43259709	0.0277289	Nanog	ENSRNOT00000022487|Cox5b|ENSRNOG00000016660|cytochrome c oxidase subunit 5B [Source:RGD Symbol%3BAcc:620608]
rn6_v1_chr3_+_114918648_114918648	0.0276231	Nanog	ENSRNOT00000089204|Sqrdl|ENSRNOG00000000172|sulfide quinone reductase-like (yeast) [Source:RGD Symbol%3BAcc:1564504]
rn6_v1_chr7_-_60294796_60294796	0.0274722	Nanog	ENSRNOT00000007580|Yeats4|ENSRNOG00000005689|YEATS domain containing 4 [Source:RGD Symbol%3BAcc:1305741]
rn6_v1_chrX_-_123708211_123708211	0.027419	Nanog	ENSRNOT00000092456|Rpl39|ENSRNOG00000043348|ribosomal protein L39 [Source:RGD Symbol%3BAcc:3593]
rn6_v1_chr3_-_127500709_127500709	0.0273271	Nanog	ENSRNOT00000006330|Hao1|ENSRNOG00000004601|hydroxyacid oxidase 1 [Source:RGD Symbol%3BAcc:1589750]
rn6_v1_chr1_+_215610368_215610426	0.0271474	Nanog	ENSRNOT00000078903|Tnni2|ENSRNOG00000020276|troponin I2%2C fast skeletal type [Source:RGD Symbol%3BAcc:62050]	ENSRNOT00000087781|Tnni2|ENSRNOG00000020276|troponin I2%2C fast skeletal type [Source:RGD Symbol%3BAcc:62050]
rn6_v1_chr1_-_64021321_64021321	0.0270669	Nanog	ENSRNOT00000090819|Rps9|ENSRNOG00000058909|ribosomal protein S9 [Source:RGD Symbol%3BAcc:619889]
rn6_v1_chr1_-_100231460_100231460	0.0267574	Nanog	ENSRNOT00000032200|Acpt|ENSRNOG00000021659|acid phosphatase%2C testicular [Source:RGD Symbol%3BAcc:1308270]
rn6_v1_chr1_+_64162672_64162672	0.026557	Nanog	ENSRNOT00000089713|Tfpt|ENSRNOG00000056098|TCF3 (E2A) fusion partner [Source:RGD Symbol%3BAcc:620839]
rn6_v1_chr5_+_98387291_98387291	0.0258153	Nanog	ENSRNOT00000046503|Tyrp1|ENSRNOG00000029318|tyrosinase-related protein 1 [Source:RGD Symbol%3BAcc:1593266]
rn6_v1_chr13_+_47935163_47935163	0.0257768	Nanog	ENSRNOT00000006768|Eif2d|ENSRNOG00000004910|eukaryotic translation initiation factor 2D [Source:RGD Symbol%3BAcc:1561765]
rn6_v1_chr8_-_128711221_128711221	0.0256183	Nanog	ENSRNOT00000055888|Xirp1|ENSRNOG00000037085|xin actin-binding repeat containing 1 [Source:RGD Symbol%3BAcc:1304776]
rn6_v1_chr19_-_25378974_25378974	0.0256071	Nanog	ENSRNOT00000011150|Ccdc130|ENSRNOG00000008319|coiled-coil domain containing 130 [Source:RGD Symbol%3BAcc:1307598]
rn6_v1_chr8_+_55504857_55504857	0.0254085	Nanog	ENSRNOT00000088320|Btg4|ENSRNOG00000011277|BTG anti-proliferation factor 4 [Source:RGD Symbol%3BAcc:1308809]
rn6_v1_chr3_-_46601409_46601409	0.0253555	Nanog	ENSRNOT00000079261|Pla2r1|ENSRNOG00000008129|phospholipase A2 receptor 1 [Source:RGD Symbol%3BAcc:1309777]
rn6_v1_chr8_+_55037750_55037750	0.0252544	Nanog	ENSRNOT00000013188|Timm8b|ENSRNOG00000009888|translocase of inner mitochondrial membrane 8 homolog B [Source:RGD Symbol%3BAcc:619840]
rn6_v1_chrX_+_77065397_77065397	0.0250621	Nanog	ENSRNOT00000090007|Cox7b|ENSRNOG00000054689|cytochrome c oxidase subunit 7B [Source:RGD Symbol%3BAcc:727789]
rn6_v1_chr2_-_118882562_118882562	0.0248184	Nanog	ENSRNOT00000058860|Kcnmb3|ENSRNOG00000027836|potassium calcium-activated channel subfamily M regulatory beta subunit 3 [Source:RGD Symbol%3BAcc:1311852]
rn6_v1_chr5_-_154332940_154332940	0.0245815	Nanog	ENSRNOT00000014458|Pithd1|ENSRNOG00000010873|PITH domain containing 1 [Source:RGD Symbol%3BAcc:1308048]
rn6_v1_chr8_-_72204730_72204730	0.0240769	Nanog	ENSRNOT00000023810|Fbxl22|ENSRNOG00000017684|F-box and leucine-rich repeat protein 22 [Source:RGD Symbol%3BAcc:1311830]
rn6_v1_chr9_-_23493081_23493081	0.0238278	Nanog	ENSRNOT00000072144|Rhag|ENSRNOG00000050121|Rh-associated glycoprotein [Source:RGD Symbol%3BAcc:61871]
rn6_v1_chr10_+_45966926_45966926	0.0237956	Nanog	ENSRNOT00000067584|Olfr225|ENSRNOG00000021988|olfactory receptor 225 [Source:MGI Symbol%3BAcc:MGI:3030059]
rn6_v1_chr5_-_141430659_141430659	0.023795	Nanog	ENSRNOT00000034944|Akirin1|ENSRNOG00000026610|akirin 1 [Source:RGD Symbol%3BAcc:1585989]
rn6_v1_chr10_-_34333305_34333305	0.0236456	Nanog	ENSRNOT00000071365|Olr1384|ENSRNOG00000047001|olfactory receptor gene Olr1384 [Source:RGD Symbol%3BAcc:1586044]
rn6_v1_chr4_-_34282351_34282351	0.0234619	Nanog	ENSRNOT00000011123|Rpa3|ENSRNOG00000008309|replication protein A3 [Source:RGD Symbol%3BAcc:1306810]
rn6_v1_chrM_+_9451_9451	0.0233707	Nanog	ENSRNOT00000041241|Mt-nd3|ENSRNOG00000033615|mitochondrially encoded NADH dehydrogenase 3 [Source:RGD Symbol%3BAcc:620557]
rn6_v1_chr5_-_24631679_24631698	0.0232428	Nanog	ENSRNOT00000010846|Esrp1|ENSRNOG00000008184|epithelial splicing regulatory protein 1 [Source:RGD Symbol%3BAcc:1560481]	ENSRNOT00000067129|Esrp1|ENSRNOG00000008184|epithelial splicing regulatory protein 1 [Source:RGD Symbol%3BAcc:1560481]
rn6_v1_chr15_-_52320385_52320385	0.0231545	Nanog	ENSRNOT00000067776|Dmtn|ENSRNOG00000012273|dematin actin binding protein [Source:RGD Symbol%3BAcc:1311419]
rn6_v1_chr8_-_132919110_132919110	0.0231258	Nanog	ENSRNOT00000008747|Xcr1|ENSRNOG00000006620|X-C motif chemokine receptor 1 [Source:RGD Symbol%3BAcc:1311480]
rn6_v1_chr1_+_101214593_101214593	0.0231145	Nanog	ENSRNOT00000028086|Tead2|ENSRNOG00000020695|TEA domain transcription factor 2 [Source:RGD Symbol%3BAcc:1593252]
rn6_v1_chr17_-_62299655_62299655	0.023054	Nanog	ENSRNOT00000024855|Gjd4|ENSRNOG00000018407|gap junction protein%2C delta 4 [Source:RGD Symbol%3BAcc:628621]
rn6_v1_chr8_+_117455262_117455262	0.0230493	Nanog	ENSRNOT00000027520|Slc25a20|ENSRNOG00000020288|solute carrier family 25 member 20 [Source:RGD Symbol%3BAcc:621443]
rn6_v1_chr1_+_222844144_222844144	0.0230459	Nanog	ENSRNOT00000032879|Pla2g16|ENSRNOG00000021206|phospholipase A2%2C group XVI [Source:RGD Symbol%3BAcc:2829]
rn6_v1_chr10_+_43851950_43851950	0.0228749	Nanog	ENSRNOT00000085666|LOC691277|ENSRNOG00000053179|similar to Robo-1 [Source:RGD Symbol%3BAcc:1586234]
rn6_v1_chr4_+_153805993_153805993	0.0226774	Nanog	ENSRNOT00000056174|Usp18|ENSRNOG00000037198|ubiquitin specific peptidase 18 [Source:RGD Symbol%3BAcc:1359153]
rn6_v1_chr5_-_101166651_101166651	0.0226534	Nanog	ENSRNOT00000078862|Frem1|ENSRNOG00000022309|Fras1 related extracellular matrix 1 [Source:RGD Symbol%3BAcc:1306981]
rn6_v1_chr10_-_90151042_90151042	0.0224322	Nanog	ENSRNOT00000055187|Hdac5|ENSRNOG00000020905|histone deacetylase 5 [Source:RGD Symbol%3BAcc:619980]
rn6_v1_chr1_-_19376301_19376301	0.0221814	Nanog	ENSRNOT00000015547|Arhgap18|ENSRNOG00000011245|Rho GTPase activating protein 18 [Source:RGD Symbol%3BAcc:1305053]
rn6_v1_chr11_-_32550539_32550539	0.0221261	Nanog	ENSRNOT00000002715|Rcan1|ENSRNOG00000001979|regulator of calcineurin 1 [Source:RGD Symbol%3BAcc:631338]
rn6_v1_chr1_+_177569618_177569618	0.0217184	Nanog	ENSRNOT00000090042|Tead1|ENSRNOG00000015488|TEA domain transcription factor 1 [Source:RGD Symbol%3BAcc:1549742]
rn6_v1_chr5_+_59008933_59008933	0.0214893	Nanog	ENSRNOT00000023060|Car9|ENSRNOG00000017073|carbonic anhydrase 9 [Source:RGD Symbol%3BAcc:1306426]
rn6_v1_chr13_-_90977734_90977734	0.0214865	Nanog	ENSRNOT00000011869|Slamf8|ENSRNOG00000008736|SLAM family member 8 [Source:RGD Symbol%3BAcc:1306263]
rn6_v1_chr16_+_71738718_71738718	0.0214607	Nanog	ENSRNOT00000022097|Plekha2|ENSRNOG00000038365|pleckstrin homology domain containing A2 [Source:RGD Symbol%3BAcc:1586710]
rn6_v1_chr14_-_19072677_19072677	0.0213201	Nanog	ENSRNOT00000060548|LOC360919|ENSRNOG00000039504|similar to alpha-fetoprotein [Source:RGD Symbol%3BAcc:1561929]
rn6_v1_chr1_-_89014189_89014189	0.0212491	Nanog	ENSRNOT00000028413|Lin37|ENSRNOG00000020929|lin-37 DREAM MuvB core complex component [Source:RGD Symbol%3BAcc:1308901]
rn6_v1_chr9_-_99299715_99299715	0.0212364	Nanog	ENSRNOT00000027622|Hdac4|ENSRNOG00000020372|histone deacetylase 4 [Source:RGD Symbol%3BAcc:619979]
rn6_v1_chr11_+_87549059_87549059	0.0212322	Nanog	ENSRNOT00000002567|Ccdc74a|ENSRNOG00000001876|coiled-coil domain containing 74A [Source:RGD Symbol%3BAcc:1588214]
rn6_v1_chr10_+_68588789_68588789	0.0212164	Nanog	ENSRNOT00000049614|AABR07030122.1|ENSRNOG00000030217|
rn6_v1_chr2_-_195279218_195279218	0.0209859	Nanog	ENSRNOT00000085565|RGD1559714|ENSRNOG00000061251|similar to TDPOZ3 [Source:RGD Symbol%3BAcc:1559714]
rn6_v1_chr5_+_33097654_33097654	0.0206922	Nanog	ENSRNOT00000008087|Cngb3|ENSRNOG00000006084|cyclic nucleotide gated channel beta 3 [Source:RGD Symbol%3BAcc:1565364]
rn6_v1_chr13_-_48927483_48927483	0.0205898	Nanog	ENSRNOT00000010976|Cdk18|ENSRNOG00000008137|cyclin-dependent kinase 18 [Source:RGD Symbol%3BAcc:1309523]
rn6_v1_chr19_-_29134876_29134876	0.0205302	Nanog	ENSRNOT00000040545|AABR07043523.1|ENSRNOG00000047845|
rn6_v1_chr3_-_147263275_147263275	0.0204201	Nanog	ENSRNOT00000029620|Psmf1|ENSRNOG00000009640|proteasome inhibitor subunit 1 [Source:RGD Symbol%3BAcc:1587528]
rn6_v1_chr7_+_78649875_78649875	0.0204189	Nanog	ENSRNOT00000006243|Dcstamp|ENSRNOG00000004704|dendrocyte expressed seven transmembrane protein [Source:RGD Symbol%3BAcc:1310435]
rn6_v1_chr7_-_134722215_134722215	0.0204096	Nanog	ENSRNOT00000036750|Prickle1|ENSRNOG00000022772|prickle planar cell polarity protein 1 [Source:RGD Symbol%3BAcc:735090]
rn6_v1_chrX_-_1346181_1346181	0.0199828	Nanog	ENSRNOT00000042736|LOC102555453|ENSRNOG00000028993|60S ribosomal protein L12-like [Source:RGD Symbol%3BAcc:7600399]
rn6_v1_chr4_-_170740274_170740274	0.0198634	Nanog	ENSRNOT00000012212|Gucy2c|ENSRNOG00000009031|guanylate cyclase 2C [Source:RGD Symbol%3BAcc:2771]
rn6_v1_chr10_+_49231730_49231730	0.0197664	Nanog	ENSRNOT00000065335|Trim16|ENSRNOG00000003219|tripartite motif-containing 16 [Source:RGD Symbol%3BAcc:1309749]
rn6_v1_chr1_+_60717386_60717386	0.0195743	Nanog	ENSRNOT00000015019|Ppp2r1a|ENSRNOG00000011282|protein phosphatase 2 scaffold subunit A alpha [Source:RGD Symbol%3BAcc:620907]
rn6_v1_chr10_+_62303662_62303662	0.0194755	Nanog	ENSRNOT00000056355|Tlcd2|ENSRNOG00000037275|TLC domain containing 2 [Source:RGD Symbol%3BAcc:1562631]
rn6_v1_chr8_-_49502647_49502647	0.019451	Nanog	ENSRNOT00000040313|Tmprss4|ENSRNOG00000026650|transmembrane protease%2C serine 4 [Source:RGD Symbol%3BAcc:1305033]
rn6_v1_chr11_+_76147205_76147205	0.0192715	Nanog	ENSRNOT00000071586|Fgf12|ENSRNOG00000001931|fibroblast growth factor 12 [Source:RGD Symbol%3BAcc:620163]
rn6_v1_chr1_-_100234040_100234040	0.0192317	Nanog	ENSRNOT00000079199|Acpt|ENSRNOG00000021659|acid phosphatase%2C testicular [Source:RGD Symbol%3BAcc:1308270]
rn6_v1_chr5_+_33784715_33784715	0.0188514	Nanog	ENSRNOT00000035685|Slc7a13|ENSRNOG00000024903|solute carrier family 7 member 13 [Source:RGD Symbol%3BAcc:1311633]
rn6_v1_chrX_-_23139694_23139694	0.0188292	Nanog	ENSRNOT00000033656|Pfkfb1|ENSRNOG00000000165|6-phosphofructo-2-kinase/fructose-2%2C6-biphosphatase 1 [Source:RGD Symbol%3BAcc:3307]
rn6_v1_chr16_-_47535358_47535358	0.0187235	Nanog	ENSRNOT00000040731|Cldn22|ENSRNOG00000030889|claudin 22 [Source:RGD Symbol%3BAcc:1305271]
rn6_v1_chr4_-_138830117_138830117	0.0185779	Nanog	ENSRNOT00000008403|Il5ra|ENSRNOG00000005954|interleukin 5 receptor subunit alpha [Source:RGD Symbol%3BAcc:70938]
rn6_v1_chr14_+_45062662_45062662	0.0184995	Nanog	ENSRNOT00000059124|Tlr10|ENSRNOG00000038722|toll-like receptor 10 [Source:RGD Symbol%3BAcc:1311569]
rn6_v1_chr20_+_26534535_26534535	0.018439	Nanog	ENSRNOT00000000423|Tmem167b|ENSRNOG00000000376|transmembrane protein 167B [Source:RGD Symbol%3BAcc:1564454]
rn6_v1_chr3_-_147481073_147481073	0.0183436	Nanog	ENSRNOT00000084722|Fam110a|ENSRNOG00000050946|family with sequence similarity 110%2C member A [Source:RGD Symbol%3BAcc:1308904]
rn6_v1_chr10_+_31324512_31324512	0.0182447	Nanog	ENSRNOT00000008559|Fndc9|ENSRNOG00000006549|fibronectin type III domain containing 9 [Source:RGD Symbol%3BAcc:2318580]
rn6_v1_chr5_+_154668179_154668179	0.0180554	Nanog	ENSRNOT00000015971|Hnrnpr|ENSRNOG00000011910|heterogeneous nuclear ribonucleoprotein R [Source:RGD Symbol%3BAcc:631348]
rn6_v1_chr4_+_118167294_118167294	0.0179197	Nanog	ENSRNOT00000022367|LOC687679|ENSRNOG00000016507|similar to small nuclear ribonucleoprotein polypeptide G [Source:RGD Symbol%3BAcc:1583028]
rn6_v1_chr2_-_179704629_179704629	0.01785	Nanog	ENSRNOT00000083361|Gria2|ENSRNOG00000054204|glutamate ionotropic receptor AMPA type subunit 2 [Source:RGD Symbol%3BAcc:61862]	ENSRNOT00000077941|Gria2|ENSRNOG00000054204|glutamate ionotropic receptor AMPA type subunit 2 [Source:RGD Symbol%3BAcc:61862]
rn6_v1_chr5_-_151768123_151768123	0.0178353	Nanog	ENSRNOT00000079380|Nudc|ENSRNOG00000051720|nuclear distribution C%2C dynein complex regulator [Source:RGD Symbol%3BAcc:3215]
rn6_v1_chr19_+_54314865_54314865	0.0177933	Nanog	ENSRNOT00000024069|Irf8|ENSRNOG00000017869|interferon regulatory factor 8 [Source:RGD Symbol%3BAcc:1312024]
rn6_v1_chr19_-_14945302_14945302	0.0176184	Nanog	ENSRNOT00000079391|AABR07042936.2|ENSRNOG00000057497|
rn6_v1_chr7_+_60015998_60015998	0.0172572	Nanog	ENSRNOT00000007309|Best3|ENSRNOG00000005491|bestrophin 3 [Source:RGD Symbol%3BAcc:1305439]
rn6_v1_chr17_+_2690062_2690062	0.0171167	Nanog	ENSRNOT00000024937|Olr1653|ENSRNOG00000018489|olfactory receptor 1653 [Source:RGD Symbol%3BAcc:1334058]
rn6_v1_chr8_-_48672732_48672732	0.0170776	Nanog	ENSRNOT00000079275|Hmbs|ENSRNOG00000010390|hydroxymethylbilane synthase [Source:RGD Symbol%3BAcc:2801]
rn6_v1_chr7_-_58343137_58343145	0.0167248	Nanog	ENSRNOT00000005310|Tmem19|ENSRNOG00000003985|transmembrane protein 19 [Source:RGD Symbol%3BAcc:735209]	ENSRNOT00000090560|Tmem19|ENSRNOG00000003985|transmembrane protein 19 [Source:RGD Symbol%3BAcc:735209]
rn6_v1_chr16_-_31972507_31972507	0.0167068	Nanog	ENSRNOT00000032199|Cbr4|ENSRNOG00000024411|carbonyl reductase 4 [Source:RGD Symbol%3BAcc:727826]
rn6_v1_chr18_-_69944632_69944632	0.0165609	Nanog	ENSRNOT00000047271|Mapk4|ENSRNOG00000015401|mitogen-activated protein kinase 4 [Source:RGD Symbol%3BAcc:3047]
rn6_v1_chr15_-_9086282_9086282	0.0165423	Nanog	ENSRNOT00000008989|Thrb|ENSRNOG00000006649|thyroid hormone receptor beta [Source:RGD Symbol%3BAcc:3858]
rn6_v1_chr13_+_99335020_99335020	0.0163408	Nanog	ENSRNOT00000029787|AABR07021930.1|ENSRNOG00000037928|
rn6_v1_chrX_-_152932953_152932953	0.0161072	Nanog	ENSRNOT00000078929|Cetn2|ENSRNOG00000059593|centrin 2 [Source:RGD Symbol%3BAcc:620247]
rn6_v1_chr8_+_115069095_115069095	0.0156976	Nanog	ENSRNOT00000014770|Dusp7|ENSRNOG00000010789|dual specificity phosphatase 7 [Source:RGD Symbol%3BAcc:735026]
rn6_v1_chr3_+_117421604_117421673	0.0156503	Nanog	ENSRNOT00000008860|Slc12a1|ENSRNOG00000005367|solute carrier family 12 member 1 [Source:RGD Symbol%3BAcc:3685]	ENSRNOT00000008857|Slc12a1|ENSRNOG00000005367|solute carrier family 12 member 1 [Source:RGD Symbol%3BAcc:3685]
rn6_v1_chr20_-_157665_157677	0.0152821	Nanog	ENSRNOT00000048858|RT1-CE10|ENSRNOG00000050210|RT1 class I%2C locus CE10 [Source:RGD Symbol%3BAcc:1359292]	ENSRNOT00000079494|RT1-CE10|ENSRNOG00000050210|RT1 class I%2C locus CE10 [Source:RGD Symbol%3BAcc:1359292]
rn6_v1_chr1_-_214511529_214511529	0.0151491	Nanog	ENSRNOT00000026390|Chid1|ENSRNOG00000050181|chitinase domain containing 1 [Source:RGD Symbol%3BAcc:1308955]
rn6_v1_chr2_+_178679041_178679041	0.0150611	Nanog	ENSRNOT00000013524|Fam198b|ENSRNOG00000010183|family with sequence similarity 198%2C member B [Source:RGD Symbol%3BAcc:735075]
rn6_v1_chr1_+_189432604_189432604	0.0150453	Nanog	ENSRNOT00000034610|Acsm4|ENSRNOG00000014726|acyl-CoA synthetase medium-chain family member 4 [Source:RGD Symbol%3BAcc:727928]
rn6_v1_chr6_+_43829945_43829945	0.0147216	Nanog	ENSRNOT00000086548|Klf11|ENSRNOG00000054259|Kruppel-like factor 11 [Source:RGD Symbol%3BAcc:1306646]
rn6_v1_chr10_+_85628491_85628611	0.0145956	Nanog	ENSRNOT00000085000|Cisd3|ENSRNOG00000036894|CDGSH iron sulfur domain 3 [Source:RGD Symbol%3BAcc:1559720]	ENSRNOT00000066899|Cisd3|ENSRNOG00000036894|CDGSH iron sulfur domain 3 [Source:RGD Symbol%3BAcc:1559720]
rn6_v1_chr10_-_48038647_48038647	0.0145094	Nanog	ENSRNOT00000078448|Prpsap2|ENSRNOG00000002724|phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:RGD Symbol%3BAcc:620207]
rn6_v1_chr8_+_55504359_55504359	0.0144808	Nanog	ENSRNOT00000059086|Btg4|ENSRNOG00000011277|BTG anti-proliferation factor 4 [Source:RGD Symbol%3BAcc:1308809]
rn6_v1_chr7_+_123531682_123531682	0.014409	Nanog	ENSRNOT00000010606|Wbp2nl|ENSRNOG00000008038|WBP2 N-terminal like [Source:RGD Symbol%3BAcc:1586458]
rn6_v1_chr7_-_8060373_8060373	0.0143513	Nanog	ENSRNOT00000071699|Olfr798|ENSRNOG00000043382|olfactory receptor 798 [Source:MGI Symbol%3BAcc:MGI:3030632]
rn6_v1_chrX_-_159206949_159206949	0.0142018	Nanog	ENSRNOT00000071516|Map7d3|ENSRNOG00000027831|MAP7 domain containing 3 [Source:RGD Symbol%3BAcc:1565514]
rn6_v1_chr5_-_106207126_106207126	0.0141891	Nanog	ENSRNOT00000015094|Mllt3|ENSRNOG00000011280|MLLT3%2C super elongation complex subunit [Source:RGD Symbol%3BAcc:620940]
rn6_v1_chr10_+_57606650_57606650	0.0139956	Nanog	ENSRNOT00000044363|Rpain|ENSRNOG00000006913|RPA interacting protein [Source:RGD Symbol%3BAcc:1308492]	ENSRNOT00000009082|Rpain|ENSRNOG00000006913|RPA interacting protein [Source:RGD Symbol%3BAcc:1308492]
rn6_v1_chrX_+_159703578_159703578	0.0135965	Nanog	ENSRNOT00000001162|Cd40lg|ENSRNOG00000000871|CD40 ligand [Source:RGD Symbol%3BAcc:708418]
rn6_v1_chr14_-_44845218_44845218	0.0135864	Nanog	ENSRNOT00000004003|Klhl5|ENSRNOG00000008421|kelch-like family member 5 [Source:RGD Symbol%3BAcc:1309661]
rn6_v1_chr4_+_68849033_68849033	0.0134467	Nanog	ENSRNOT00000016912|Mgam|ENSRNOG00000026177|maltase-glucoamylase [Source:MGI Symbol%3BAcc:MGI:1203495]
rn6_v1_chr10_-_6870011_6870011	0.0133822	Nanog	ENSRNOT00000003439|RGD1309748|ENSRNOG00000002545|similar to CG4768-PA [Source:RGD Symbol%3BAcc:1309748]
rn6_v1_chr10_-_91661558_91661558	0.01321	Nanog	ENSRNOT00000043156|AABR07030521.1|ENSRNOG00000042833|
rn6_v1_chr19_-_24732024_24732024	0.0131861	Nanog	ENSRNOT00000037608|Tecr|ENSRNOG00000021808|trans-2%2C3-enoyl-CoA reductase [Source:RGD Symbol%3BAcc:620376]
rn6_v1_chr8_+_117126692_117126692	0.0129486	Nanog	ENSRNOT00000083046|Usp4|ENSRNOG00000054863|ubiquitin specific peptidase 4 [Source:RGD Symbol%3BAcc:1587387]	ENSRNOT00000085609|Usp4|ENSRNOG00000054863|ubiquitin specific peptidase 4 [Source:RGD Symbol%3BAcc:1587387]
rn6_v1_chr12_+_47218969_47219089	0.0129351	Nanog	ENSRNOT00000081343|Unc119b|ENSRNOG00000021725|unc-119 lipid binding chaperone B [Source:RGD Symbol%3BAcc:1309359]	ENSRNOT00000038395|Unc119b|ENSRNOG00000021725|unc-119 lipid binding chaperone B [Source:RGD Symbol%3BAcc:1309359]
rn6_v1_chr5_+_18901039_18901039	0.0129222	Nanog	ENSRNOT00000012066|Fam110b|ENSRNOG00000009114|family with sequence similarity 110%2C member B [Source:RGD Symbol%3BAcc:1563403]
rn6_v1_chr8_+_62779875_62779875	0.012807	Nanog	ENSRNOT00000010831|Cyp11a1|ENSRNOG00000008074|cytochrome P450%2C family 11%2C subfamily a%2C polypeptide 1 [Source:RGD Symbol%3BAcc:69325]
rn6_v1_chr5_+_64476317_64476317	0.0127792	Nanog	ENSRNOT00000017217|LOC108348074|ENSRNOG00000039197|collagen alpha-1(XV) chain-like [Source:RGD Symbol%3BAcc:11464459]
rn6_v1_chrX_+_78372257_78372257	0.0127402	Nanog	ENSRNOT00000046164|Gpr174|ENSRNOG00000032970|G protein-coupled receptor 174 [Source:RGD Symbol%3BAcc:1564689]
rn6_v1_chr19_+_387374_387374	0.0125041	Nanog	ENSRNOT00000075433|LOC102547811|ENSRNOG00000046212|uncharacterized LOC102547811 [Source:RGD Symbol%3BAcc:7551408]
rn6_v1_chr4_+_96562725_96562725	0.0124569	Nanog	ENSRNOT00000009094|Ndnf|ENSRNOG00000006857|neuron-derived neurotrophic factor [Source:RGD Symbol%3BAcc:1311080]
rn6_v1_chr10_+_12980674_12980674	0.0120821	Nanog	ENSRNOT00000004638|Bicdl2|ENSRNOG00000003457|BICD family like cargo adaptor 2 [Source:RGD Symbol%3BAcc:1306729]
rn6_v1_chr4_-_57983236_57983236	0.0118414	Nanog	ENSRNOT00000014621|Cep41|ENSRNOG00000010950|centrosomal protein 41 [Source:RGD Symbol%3BAcc:1562034]
rn6_v1_chr20_-_157861_157861	0.011828	Nanog	ENSRNOT00000084461|RT1-CE10|ENSRNOG00000050210|RT1 class I%2C locus CE10 [Source:RGD Symbol%3BAcc:1359292]
rn6_v1_chr10_-_82027119_82027119	0.0116773	Nanog	ENSRNOT00000003914|Luc7l3|ENSRNOG00000002835|LUC7-like 3 pre-mRNA splicing factor [Source:RGD Symbol%3BAcc:1307981]
rn6_v1_chr12_+_47992091_47992091	0.0115113	Nanog	ENSRNOT00000073019|Kctd10|ENSRNOG00000047896|potassium channel tetramerization domain containing 10 [Source:RGD Symbol%3BAcc:1591979]
rn6_v1_chr12_+_12738812_12738820	0.0114233	Nanog	ENSRNOT00000092233|Aimp2|ENSRNOG00000001044|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 [Source:RGD Symbol%3BAcc:1560787]	ENSRNOT00000001379|Aimp2|ENSRNOG00000001044|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 [Source:RGD Symbol%3BAcc:1560787]
rn6_v1_chr1_-_214074663_214074663	0.0113885	Nanog	ENSRNOT00000026215|LOC100911881|ENSRNOG00000019351|chitinase domain-containing protein 1-like [Source:RGD Symbol%3BAcc:6490147]
rn6_v1_chr2_-_250981623_250981623	0.0113873	Nanog	ENSRNOT00000018435|Clca2|ENSRNOG00000013771|chloride channel accessory 2 [Source:RGD Symbol%3BAcc:1304894]
rn6_v1_chr1_-_206394346_206394346	0.0111781	Nanog	ENSRNOT00000038122|LOC100302465|ENSRNOG00000027542|hypothetical LOC100302465 [Source:RGD Symbol%3BAcc:2311471]
rn6_v1_chr9_-_94192813_94192813	0.0111494	Nanog	ENSRNOT00000025978|Alpp|ENSRNOG00000033672|alkaline phosphatase%2C placental [Source:RGD Symbol%3BAcc:2325055]
rn6_v1_chr1_-_189238776_189238776	0.0111261	Nanog	ENSRNOT00000020817|Pdilt|ENSRNOG00000015368|protein disulfide isomerase-like%2C testis expressed [Source:RGD Symbol%3BAcc:1307822]
rn6_v1_chrX_+_152933069_152933069	0.011101	Nanog	ENSRNOT00000091154|Nsdhl|ENSRNOG00000057814|NAD(P) dependent steroid dehydrogenase-like [Source:RGD Symbol%3BAcc:1359337]
rn6_v1_chr7_-_57816621_57816621	0.0110324	Nanog	ENSRNOT00000090748|AABR07057150.1|ENSRNOG00000058424|
rn6_v1_chr17_+_43460782_43460782	0.0109673	Nanog	ENSRNOT00000059494|Slc17a4|ENSRNOG00000022505|solute carrier family 17%2C member 4 [Source:RGD Symbol%3BAcc:1584758]
rn6_v1_chr3_-_60023913_60023913	0.0109546	Nanog	ENSRNOT00000064662|Cir1|ENSRNOG00000018719|corepressor interacting with RBPJ%2C 1 [Source:RGD Symbol%3BAcc:1309199]
rn6_v1_chr1_-_224533219_224533219	0.0108272	Nanog	ENSRNOT00000051289|Ust5r|ENSRNOG00000061890|integral membrane transport protein UST5r [Source:RGD Symbol%3BAcc:620985]
rn6_v1_chr10_+_56605140_56605140	0.0107922	Nanog	ENSRNOT00000024079|Phf23|ENSRNOG00000017657|PHD finger protein 23 [Source:RGD Symbol%3BAcc:1302969]
rn6_v1_chr4_-_113886994_113886994	0.0107518	Nanog	ENSRNOT00000037333|Htra2|ENSRNOG00000022448|HtrA serine peptidase 2 [Source:RGD Symbol%3BAcc:1308906]
rn6_v1_chr3_+_107142762_107142762	0.0107418	Nanog	ENSRNOT00000006177|RGD1563680|ENSRNOG00000004571|similar to CDNA sequence BC052040 [Source:RGD Symbol%3BAcc:1563680]
rn6_v1_chr7_+_139762614_139762614	0.0106078	Nanog	ENSRNOT00000031157|Ccdc184|ENSRNOG00000021945|coiled-coil domain containing 184 [Source:RGD Symbol%3BAcc:1593153]
rn6_v1_chr2_-_224723112_224723112	0.0103205	Nanog	ENSRNOT00000040080|Rwdd3|ENSRNOG00000029893|RWD domain containing 3 [Source:RGD Symbol%3BAcc:620472]
rn6_v1_chr7_+_38900593_38900593	0.0102798	Nanog	ENSRNOT00000072166|Epyc|ENSRNOG00000004717|epiphycan [Source:RGD Symbol%3BAcc:1305904]
rn6_v1_chr14_+_7618022_7618022	0.010194	Nanog	ENSRNOT00000088508|Slc10a6|ENSRNOG00000002057|solute carrier family 10 member 6 [Source:RGD Symbol%3BAcc:727800]	ENSRNOT00000002819|Slc10a6|ENSRNOG00000002057|solute carrier family 10 member 6 [Source:RGD Symbol%3BAcc:727800]
rn6_v1_chr7_-_3386522_3386522	0.0101097	Nanog	ENSRNOT00000010760|Mettl7b|ENSRNOG00000007927|methyltransferase like 7B [Source:RGD Symbol%3BAcc:1305205]
rn6_v1_chr9_-_71778188_71778323	0.010032	Nanog	ENSRNOT00000064562|Crygd|ENSRNOG00000032219|crystallin%2C gamma D [Source:RGD Symbol%3BAcc:2422]	ENSRNOT00000050886|Crygd|ENSRNOG00000032219|crystallin%2C gamma D [Source:RGD Symbol%3BAcc:2422]
rn6_v1_chr1_+_64480929_64480929	0.00993909	Nanog	ENSRNOT00000087016|Olr1l|ENSRNOG00000053124|olfactory receptor 1-like [Source:RGD Symbol%3BAcc:1333287]
rn6_v1_chr6_-_114488880_114488880	0.00982959	Nanog	ENSRNOT00000087560|AC118957.1|ENSRNOG00000057724|
rn6_v1_chr12_-_21720094_21720094	0.0098244	Nanog	ENSRNOT00000032838|LOC100910636|ENSRNOG00000024425|zinc finger CW-type PWWP domain protein 1-like [Source:RGD Symbol%3BAcc:6497217]
rn6_v1_chr3_+_111160205_111160205	0.00948751	Nanog	ENSRNOT00000019392|Chac1|ENSRNOG00000014387|ChaC glutathione-specific gamma-glutamylcyclotransferase 1 [Source:RGD Symbol%3BAcc:1307153]
rn6_v1_chr8_-_22929294_22929294	0.00947002	Nanog	ENSRNOT00000015609|Rab3d|ENSRNOG00000011582|RAB3D%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620924]
rn6_v1_chr10_+_31508512_31508512	0.00942904	Nanog	ENSRNOT00000031580|Fam71b|ENSRNOG00000021425|family with sequence similarity 71%2C member B [Source:RGD Symbol%3BAcc:1563555]
rn6_v1_chr8_-_55194692_55194692	0.00934745	Nanog	ENSRNOT00000068366|RGD1564937|ENSRNOG00000030962|similar to RIKEN cDNA 1110032A03 [Source:RGD Symbol%3BAcc:1564937]
rn6_v1_chrX_+_158350347_158350347	0.00933566	Nanog	ENSRNOT00000066874|LOC100909732|ENSRNOG00000050146|protein FAM122B-like [Source:RGD Symbol%3BAcc:6501955]
rn6_v1_chr20_+_41266566_41266566	0.00933547	Nanog	ENSRNOT00000000653|Frk|ENSRNOG00000000543|fyn-related Src family tyrosine kinase [Source:RGD Symbol%3BAcc:621423]
rn6_v1_chr15_-_49467174_49467174	0.009312	Nanog	ENSRNOT00000019209|Adam7|ENSRNOG00000014054|ADAM metallopeptidase domain 7 [Source:RGD Symbol%3BAcc:62032]
rn6_v1_chr16_-_49453394_49453394	0.00916853	Nanog	ENSRNOT00000041617|Lrp2bp|ENSRNOG00000011178|Lrp2 binding protein [Source:RGD Symbol%3BAcc:1305896]
rn6_v1_chr1_-_169534896_169534896	0.00890145	Nanog	ENSRNOT00000082645|Trim30c|ENSRNOG00000017191|tripartite motif-containing 30C [Source:RGD Symbol%3BAcc:1566132]
rn6_v1_chr7_+_119647375_119647375	0.00884875	Nanog	ENSRNOT00000046563|Kctd17|ENSRNOG00000000231|potassium channel tetramerization domain containing 17 [Source:RGD Symbol%3BAcc:1311154]
rn6_v1_chr2_-_79078258_79078258	0.00883372	Nanog	ENSRNOT00000031170|Fbxl7|ENSRNOG00000024433|F-box and leucine-rich repeat protein 7 [Source:RGD Symbol%3BAcc:1305813]
rn6_v1_chr1_+_196996581_196996581	0.00880787	Nanog	ENSRNOT00000021690|Il21r|ENSRNOG00000015773|interleukin 21 receptor [Source:RGD Symbol%3BAcc:1304950]
rn6_v1_chr3_+_147511406_147511406	0.00880666	Nanog	ENSRNOT00000082438|Slc52a3|ENSRNOG00000005132|solute carrier family 52 member 3 [Source:RGD Symbol%3BAcc:1304644]
rn6_v1_chr1_+_224998172_224998172	0.00872232	Nanog	ENSRNOT00000026321|Zbtb3|ENSRNOG00000019461|zinc finger and BTB domain containing 3 [Source:RGD Symbol%3BAcc:1561140]
rn6_v1_chrX_+_121612952_121612952	0.0087206	Nanog	ENSRNOT00000022122|AABR07041179.1|ENSRNOG00000016400|
rn6_v1_chr1_+_257970345_257970345	0.0086443	Nanog	ENSRNOT00000088853|Cyp2c11|ENSRNOG00000052810|cytochrome P450%2C subfamily 2%2C polypeptide 11 [Source:RGD Symbol%3BAcc:2469]
rn6_v1_chr12_-_22726982_22726982	0.00863023	Nanog	ENSRNOT00000001921|Plod3|ENSRNOG00000001417|procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3 [Source:RGD Symbol%3BAcc:631339]
rn6_v1_chr2_-_250805445_250805445	0.00822624	Nanog	ENSRNOT00000055362|Clca4l|ENSRNOG00000036877|chloride channel calcium activated 4-like [Source:RGD Symbol%3BAcc:1591945]
rn6_v1_chr1_-_215858034_215858034	0.00819528	Nanog	ENSRNOT00000027656|Ins2|ENSRNOG00000020405|insulin 2 [Source:RGD Symbol%3BAcc:2916]
rn6_v1_chr1_+_198284473_198284473	0.00816765	Nanog	ENSRNOT00000027022|Doc2a|ENSRNOG00000019920|double C2 domain alpha [Source:RGD Symbol%3BAcc:620518]
rn6_v1_chr4_-_42188289_42188289	0.00783207	Nanog	ENSRNOT00000081688|Rbmxl1b|ENSRNOG00000059347|RNA binding motif protein%2C X-linked-like 1B [Source:RGD Symbol%3BAcc:1585845]
rn6_v1_chr3_+_97256881_97256881	0.0073018	Nanog	ENSRNOT00000041494|Dcdc5|ENSRNOG00000022178|doublecortin domain containing 5 [Source:RGD Symbol%3BAcc:1562221]
rn6_v1_chr4_+_2053712_2053712	0.00723798	Nanog	ENSRNOT00000045086|Rnf32|ENSRNOG00000005691|ring finger protein 32 [Source:RGD Symbol%3BAcc:1308287]
rn6_v1_chrX_+_110789269_110789269	0.0069288	Nanog	ENSRNOT00000086014|Rnf128|ENSRNOG00000055721|ring finger protein 128%2C E3 ubiquitin protein ligase [Source:RGD Symbol%3BAcc:1566282]
rn6_v1_chr18_+_36829062_36829090	0.0068714	Nanog	ENSRNOT00000025467|Tcerg1|ENSRNOG00000018849|transcription elongation regulator 1 [Source:RGD Symbol%3BAcc:1311748]	ENSRNOT00000086979|Tcerg1|ENSRNOG00000018849|transcription elongation regulator 1 [Source:RGD Symbol%3BAcc:1311748]
rn6_v1_chr10_+_92018562_92018562	0.0068594	Nanog	ENSRNOT00000006483|Arf2|ENSRNOG00000004807|ADP-ribosylation factor 2 [Source:RGD Symbol%3BAcc:621271]
rn6_v1_chr6_-_92121351_92121351	0.00675738	Nanog	ENSRNOT00000006374|Cdkl1|ENSRNOG00000038720|cyclin dependent kinase like 1 [Source:RGD Symbol%3BAcc:1305080]
rn6_v1_chr12_+_12859661_12859661	0.00669299	Nanog	ENSRNOT00000001404|Usp42|ENSRNOG00000001059|ubiquitin specific peptidase 42 [Source:RGD Symbol%3BAcc:1305231]
rn6_v1_chr14_-_21299068_21299068	0.0061554	Nanog	ENSRNOT00000065778|Amtn|ENSRNOG00000003776|amelotin [Source:RGD Symbol%3BAcc:1592356]
rn6_v1_chr8_+_119160731_119160731	0.00601684	Nanog	ENSRNOT00000046745|Als2cl|ENSRNOG00000033921|ALS2 C-terminal like [Source:RGD Symbol%3BAcc:1305208]
rn6_v1_chr10_-_66858598_66858598	0.00585361	Nanog	ENSRNOT00000018898|Evi2b|ENSRNOG00000014125|ecotropic viral integration site 2B [Source:RGD Symbol%3BAcc:6495961]
rn6_v1_chr19_-_25345790_25345790	0.00585348	Nanog	ENSRNOT00000010050|Zswim4|ENSRNOG00000007582|zinc finger%2C SWIM-type containing 4 [Source:RGD Symbol%3BAcc:1308020]
rn6_v1_chr5_-_144274981_144274981	0.00563684	Nanog	ENSRNOT00000065871|Map7d1|ENSRNOG00000010237|MAP7 domain containing 1 [Source:RGD Symbol%3BAcc:1597986]
rn6_v1_chr14_+_34389991_34389991	0.00543944	Nanog	ENSRNOT00000002953|Pdcl2|ENSRNOG00000002169|phosducin-like 2 [Source:RGD Symbol%3BAcc:1559712]
rn6_v1_chr1_+_207887209_207887209	0.00511568	Nanog	ENSRNOT00000021359|Ptpre|ENSRNOG00000015717|protein tyrosine phosphatase%2C receptor type%2C E [Source:RGD Symbol%3BAcc:620771]
rn6_v1_chr3_-_164388281_164388281	0.00509067	Nanog	ENSRNOT00000089040|Tmem189|ENSRNOG00000060571|transmembrane protein 189 [Source:RGD Symbol%3BAcc:1309093]
rn6_v1_chr1_-_247821728_247821728	0.00504361	Nanog	ENSRNOT00000021958|Ermp1|ENSRNOG00000010915|endoplasmic reticulum metallopeptidase 1 [Source:RGD Symbol%3BAcc:727831]
rn6_v1_chr7_+_79138925_79138925	0.00498692	Nanog	ENSRNOT00000047511|AABR07057586.1|ENSRNOG00000029130|
rn6_v1_chr16_-_48981980_48981980	0.00482706	Nanog	ENSRNOT00000014235|Acsl1|ENSRNOG00000010633|acyl-CoA synthetase long-chain family member 1 [Source:RGD Symbol%3BAcc:2015]
rn6_v1_chr2_+_222021103_222021103	0.00475465	Nanog	ENSRNOT00000086125|Dpyd|ENSRNOG00000017105|dihydropyrimidine dehydrogenase [Source:RGD Symbol%3BAcc:621218]
rn6_v1_chr11_-_54344615_54344615	0.00437242	Nanog	ENSRNOT00000090307|Myh15|ENSRNOG00000061038|myosin%2C heavy chain 15 [Source:RGD Symbol%3BAcc:1565858]
rn6_v1_chr3_-_57104030_57104030	0.00436551	Nanog	ENSRNOT00000064203|Tlk1|ENSRNOG00000060572|tousled-like kinase 1 [Source:RGD Symbol%3BAcc:1310370]
rn6_v1_chr14_-_33580566_33580566	0.00403653	Nanog	ENSRNOT00000063942|Paics|ENSRNOG00000002101|phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:RGD Symbol%3BAcc:620066]
rn6_v1_chrX_+_65796787_65796787	0.00403229	Nanog	ENSRNOT00000076029|Gpr165|ENSRNOG00000012995|G protein-coupled receptor 165 [Source:RGD Symbol%3BAcc:1564566]
rn6_v1_chr3_-_164388492_164388492	0.0039877	Nanog	ENSRNOT00000090493|Tmem189|ENSRNOG00000060571|transmembrane protein 189 [Source:RGD Symbol%3BAcc:1309093]
rn6_v1_chr8_+_70447040_70447040	0.00390563	Nanog	ENSRNOT00000016798|Ints14|ENSRNOG00000012469|integrator complex subunit 14 [Source:RGD Symbol%3BAcc:1359616]
rn6_v1_chr1_-_127292090_127292090	0.00384627	Nanog	ENSRNOT00000016959|Lrrk1|ENSRNOG00000012730|leucine-rich repeat kinase 1 [Source:RGD Symbol%3BAcc:1308000]
rn6_v1_chr7_-_98197087_98197114	0.00383382	Nanog	ENSRNOT00000010484|Klhl38|ENSRNOG00000007896|kelch-like family member 38 [Source:RGD Symbol%3BAcc:1564169]	ENSRNOT00000079961|Klhl38|ENSRNOG00000007896|kelch-like family member 38 [Source:RGD Symbol%3BAcc:1564169]
rn6_v1_chr2_-_260115577_260115577	0.00381752	Nanog	ENSRNOT00000065997|Rabggtb|ENSRNOG00000009992|Rab geranylgeranyltransferase%2C beta subunit [Source:RGD Symbol%3BAcc:3530]
rn6_v1_chr17_+_16455026_16455026	0.0037843	Nanog	ENSRNOT00000022932|Zfp169|ENSRNOG00000017092|zinc finger protein 169 [Source:RGD Symbol%3BAcc:1304631]
rn6_v1_chr1_+_177048655_177048655	0.00356448	Nanog	ENSRNOT00000081595|Mical2|ENSRNOG00000016244|microtubule associated monooxygenase%2C calponin and LIM domain containing 2 [Source:RGD Symbol%3BAcc:1311773]
rn6_v1_chr20_+_44680449_44680449	0.0035391	Nanog	ENSRNOT00000000728|Traf3ip2|ENSRNOG00000000595|Traf3 interacting protein 2 [Source:RGD Symbol%3BAcc:1593240]
rn6_v1_chr12_-_38504774_38504774	0.00346628	Nanog	ENSRNOT00000011286|B3gnt4|ENSRNOG00000008544|UDP-GlcNAc:betaGal beta-1%2C3-N-acetylglucosaminyltransferase 4 [Source:RGD Symbol%3BAcc:1309612]
rn6_v1_chr4_-_21920651_21920651	0.00342031	Nanog	ENSRNOT00000066211|Tmem243|ENSRNOG00000042758|transmembrane protein 243 [Source:RGD Symbol%3BAcc:1562351]
rn6_v1_chr1_-_266142538_266142538	0.00334346	Nanog	ENSRNOT00000026792|Actr1a|ENSRNOG00000019725|ARP1 actin-related protein 1 homolog A%2C centractin alpha [Source:RGD Symbol%3BAcc:1307025]
rn6_v1_chr13_+_44424689_44424689	0.00317904	Nanog	ENSRNOT00000005206|Acmsd|ENSRNOG00000003884|aminocarboxymuconate semialdehyde decarboxylase [Source:RGD Symbol%3BAcc:620868]
rn6_v1_chr10_-_11942885_11942885	0.00310845	Nanog	ENSRNOT00000061019|Olr1356|ENSRNOG00000039773|olfactory receptor 1356 [Source:RGD Symbol%3BAcc:1334376]
rn6_v1_chr20_+_1749716_1749716	0.00290413	Nanog	ENSRNOT00000048856|Olr1735|ENSRNOG00000050043|olfactory receptor 1735 [Source:RGD Symbol%3BAcc:1334001]
rn6_v1_chr11_-_31238026_31238026	0.00288852	Nanog	ENSRNOT00000032366|RGD1562726|ENSRNOG00000028670|similar to Putative protein C21orf62 homolog [Source:RGD Symbol%3BAcc:1562726]
rn6_v1_chr8_+_60117729_60117729	0.00288087	Nanog	ENSRNOT00000021074|Isl2|ENSRNOG00000015336|ISL LIM homeobox 2 [Source:RGD Symbol%3BAcc:621849]
rn6_v1_chr6_-_52401853_52401853	0.00282683	Nanog	ENSRNOT00000075513|Cdhr3|ENSRNOG00000047455|cadherin-related family member 3 [Source:MGI Symbol%3BAcc:MGI:1916014]
rn6_v1_chr17_+_90696019_90696019	0.00268211	Nanog	ENSRNOT00000003438|Gpr137b|ENSRNOG00000002480|G protein-coupled receptor 137B [Source:RGD Symbol%3BAcc:1307342]
rn6_v1_chr19_-_914880_914880	0.00261251	Nanog	ENSRNOT00000017127|Cklf|ENSRNOG00000012752|chemokine-like factor [Source:RGD Symbol%3BAcc:620708]
rn6_v1_chr9_+_111649631_111649631	0.00258176	Nanog	ENSRNOT00000056430|Fer|ENSRNOG00000015898|FER tyrosine kinase [Source:RGD Symbol%3BAcc:1306273]
rn6_v1_chr5_+_58505500_58505500	0.00217206	Nanog	ENSRNOT00000043216|Unc13b|ENSRNOG00000008237|unc-13 homolog B [Source:RGD Symbol%3BAcc:619723]
rn6_v1_chr4_+_10748745_10748745	0.00215819	Nanog	ENSRNOT00000046142|Rsbn1l|ENSRNOG00000013431|round spermatid basic protein 1-like [Source:RGD Symbol%3BAcc:1308748]
rn6_v1_chr8_+_44061894_44061894	0.00212822	Nanog	ENSRNOT00000084416|Zfp202|ENSRNOG00000058932|zinc finger protein 202 [Source:RGD Symbol%3BAcc:1562294]
rn6_v1_chr6_+_8220228_8220228	0.0021053	Nanog	ENSRNOT00000079279|Ppm1b|ENSRNOG00000030667|protein phosphatase%2C Mg2+/Mn2+ dependent%2C 1B [Source:RGD Symbol%3BAcc:3374]	ENSRNOT00000048656|Ppm1b|ENSRNOG00000030667|protein phosphatase%2C Mg2+/Mn2+ dependent%2C 1B [Source:RGD Symbol%3BAcc:3374]
rn6_v1_chr10_+_53466870_53466870	0.00204845	Nanog	ENSRNOT00000057503|Pirt|ENSRNOG00000037852|phosphoinositide-interacting regulator of transient receptor potential channels [Source:RGD Symbol%3BAcc:1565284]
rn6_v1_chr15_-_60743064_60743064	0.00172347	Nanog	ENSRNOT00000013333|Akap11|ENSRNOG00000009987|A-kinase anchoring protein 11 [Source:RGD Symbol%3BAcc:2079]
rn6_v1_chr10_-_46206135_46206135	0.00155421	Nanog	ENSRNOT00000091471|Cops3|ENSRNOG00000053943|COP9 signalosome subunit 3 [Source:RGD Symbol%3BAcc:1303002]
rn6_v1_chr9_-_105693357_105693357	0.0011936	Nanog	ENSRNOT00000066968|Nudt12|ENSRNOG00000022576|nudix hydrolase 12 [Source:RGD Symbol%3BAcc:1310902]
rn6_v1_chr1_-_141504111_141504111	0.000868683	Nanog	ENSRNOT00000040164|Snrpep2|ENSRNOG00000034206|small nuclear ribonucleoprotein polypeptide E pseudogene 2 [Source:RGD Symbol%3BAcc:2318883]
rn6_v1_chr17_-_29360822_29360822	0.000649743	Nanog	ENSRNOT00000080031|Fars2|ENSRNOG00000016135|phenylalanyl-tRNA synthetase 2%2C mitochondrial [Source:RGD Symbol%3BAcc:1309416]
rn6_v1_chr6_+_76349362_76349362	0.000629509	Nanog	ENSRNOT00000043224|Aldoart2|ENSRNOG00000030869|aldolase 1 A retrogene 2 [Source:RGD Symbol%3BAcc:1359133]
rn6_v1_chr2_-_149432106_149432106	0.000505749	Nanog	ENSRNOT00000051027|P2ry13|ENSRNOG00000029756|purinergic receptor P2Y13 [Source:RGD Symbol%3BAcc:1302941]
rn6_v1_chr9_-_15700235_15700312	0.000492774	Nanog	ENSRNOT00000088713|Trerf1|ENSRNOG00000022598|transcriptional regulating factor 1 [Source:RGD Symbol%3BAcc:1307167]	ENSRNOT00000035907|Trerf1|ENSRNOG00000022598|transcriptional regulating factor 1 [Source:RGD Symbol%3BAcc:1307167]
rn6_v1_chr4_+_57925323_57925323	0.000486711	Nanog	ENSRNOT00000085798|Cpa5|ENSRNOG00000010467|carboxypeptidase A5 [Source:RGD Symbol%3BAcc:1303098]
rn6_v1_chr3_-_4872632_4872632	0.000196094	Nanog	ENSRNOT00000061242|Surf1|ENSRNOG00000005247|surfeit 1 [Source:RGD Symbol%3BAcc:620527]
