rn6_v1_chr2_-_260596777_260596777	0.426428	Nkx3-2	ENSRNOT00000009370|Lhx8|ENSRNOG00000028348|LIM homeobox 8 [Source:RGD Symbol%3BAcc:1308749]
rn6_v1_chr6_+_8886591_8886730	0.408994	Nkx3-2	ENSRNOT00000091510|Six3|ENSRNOG00000057031|SIX homeobox 3 [Source:RGD Symbol%3BAcc:620909]	ENSRNOT00000089174|Six3|ENSRNOG00000057031|SIX homeobox 3 [Source:RGD Symbol%3BAcc:620909]
rn6_v1_chr14_-_37770059_37770059	0.332428	Nkx3-2	ENSRNOT00000029721|Slc10a4|ENSRNOG00000026091|solute carrier family 10%2C member 4 [Source:RGD Symbol%3BAcc:1309536]
rn6_v1_chr10_-_15577977_15577977	0.306641	Nkx3-2	ENSRNOT00000052292|Hba-a3|ENSRNOG00000045989|hemoglobin alpha%2C adult chain 3 [Source:RGD Symbol%3BAcc:1359209]
rn6_v1_chr5_-_17061361_17061361	0.250658	Nkx3-2	ENSRNOT00000089318|Penk|ENSRNOG00000008943|proenkephalin [Source:RGD Symbol%3BAcc:68946]
rn6_v1_chr8_+_48569328_48569328	0.250313	Nkx3-2	ENSRNOT00000084030|Ccdc153|ENSRNOG00000039086|coiled-coil domain containing 153 [Source:RGD Symbol%3BAcc:1305351]
rn6_v1_chr10_+_110138586_110138586	0.239865	Nkx3-2	ENSRNOT00000086096|Slc16a3|ENSRNOG00000036677|solute carrier family 16 member 3 [Source:RGD Symbol%3BAcc:620603]
rn6_v1_chr5_-_17061837_17061837	0.228968	Nkx3-2	ENSRNOT00000011892|Penk|ENSRNOG00000008943|proenkephalin [Source:RGD Symbol%3BAcc:68946]
rn6_v1_chr1_+_79894450_79894450	0.213543	Nkx3-2	ENSRNOT00000057963|Nanos2|ENSRNOG00000038088|nanos C2HC-type zinc finger 2 [Source:RGD Symbol%3BAcc:1562436]
rn6_v1_chr9_+_20004280_20004280	0.211505	Nkx3-2	ENSRNOT00000075670|Ankrd66|ENSRNOG00000046426|ankyrin repeat domain 66 [Source:RGD Symbol%3BAcc:1560151]
rn6_v1_chr10_-_27862868_27862868	0.18225	Nkx3-2	ENSRNOT00000004877|Gabra6|ENSRNOG00000003569|gamma-aminobutyric acid type A receptor alpha 6 subunit [Source:RGD Symbol%3BAcc:61861]
rn6_v1_chr8_-_46694613_46694613	0.182225	Nkx3-2	ENSRNOT00000084514|AC133265.1|ENSRNOG00000059203|
rn6_v1_chr12_-_22472044_22472044	0.151471	Nkx3-2	ENSRNOT00000073356|Ufsp1|ENSRNOG00000051006|UFM1-specific peptidase 1 [Source:RGD Symbol%3BAcc:7536909]
rn6_v1_chr18_+_79406381_79406381	0.137786	Nkx3-2	ENSRNOT00000022303|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]	ENSRNOT00000058295|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]	ENSRNOT00000058296|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]	ENSRNOT00000022280|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]
rn6_v1_chr10_+_74874130_74874138	0.137043	Nkx3-2	ENSRNOT00000076050|Sept4|ENSRNOG00000007367|septin 4 [Source:RGD Symbol%3BAcc:1308781]	ENSRNOT00000044226|Sept4|ENSRNOG00000007367|septin 4 [Source:RGD Symbol%3BAcc:1308781]	ENSRNOT00000085052|Sept4|ENSRNOG00000007367|septin 4 [Source:RGD Symbol%3BAcc:1308781]	ENSRNOT00000076196|Sept4|ENSRNOG00000007367|septin 4 [Source:RGD Symbol%3BAcc:1308781]
rn6_v1_chr9_-_78969013_78969078	0.136802	Nkx3-2	ENSRNOT00000019772|Fn1|ENSRNOG00000014288|fibronectin 1 [Source:RGD Symbol%3BAcc:2624]	ENSRNOT00000057585|Fn1|ENSRNOG00000014288|fibronectin 1 [Source:RGD Symbol%3BAcc:2624]
rn6_v1_chr4_-_30338679_30338679	0.133964	Nkx3-2	ENSRNOT00000012050|Pon3|ENSRNOG00000009096|paraoxonase 3 [Source:RGD Symbol%3BAcc:1302965]
rn6_v1_chr7_+_116632506_116632506	0.133657	Nkx3-2	ENSRNOT00000009811|Gpihbp1|ENSRNOG00000007475|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 [Source:RGD Symbol%3BAcc:1564237]
rn6_v1_chr1_-_7801438_7801438	0.128739	Nkx3-2	ENSRNOT00000022273|AABR07000276.1|ENSRNOG00000016624|
rn6_v1_chr11_-_72109964_72109964	0.125587	Nkx3-2	ENSRNOT00000058917|AABR07034445.1|ENSRNOG00000038610|
rn6_v1_chr7_-_107775712_107775714	0.120446	Nkx3-2	ENSRNOT00000010811|Ndrg1|ENSRNOG00000007393|N-myc downstream regulated 1 [Source:RGD Symbol%3BAcc:1307303]	ENSRNOT00000093459|Ndrg1|ENSRNOG00000007393|N-myc downstream regulated 1 [Source:RGD Symbol%3BAcc:1307303]
rn6_v1_chr5_+_129257429_129257429	0.116401	Nkx3-2	ENSRNOT00000072396|Ttc39a|ENSRNOG00000047573|tetratricopeptide repeat domain 39A [Source:RGD Symbol%3BAcc:1311126]
rn6_v1_chr9_+_67763897_67763897	0.110049	Nkx3-2	ENSRNOT00000071226|Icos|ENSRNOG00000046196|inducible T-cell co-stimulator [Source:RGD Symbol%3BAcc:620123]
rn6_v1_chr8_+_128824508_128824508	0.109456	Nkx3-2	ENSRNOT00000025343|Mobp|ENSRNOG00000018700|myelin-associated oligodendrocyte basic protein [Source:RGD Symbol%3BAcc:3101]
rn6_v1_chr4_-_70996395_70996395	0.104706	Nkx3-2	ENSRNOT00000021485|Kel|ENSRNOG00000015682|Kell blood group%2C metallo-endopeptidase [Source:RGD Symbol%3BAcc:1565470]
rn6_v1_chr1_-_89068348_89068348	0.104092	Nkx3-2	ENSRNOT00000033621|Upk1a|ENSRNOG00000024331|uroplakin 1A [Source:RGD Symbol%3BAcc:1309849]
rn6_v1_chr11_+_70687500_70687500	0.0958436	Nkx3-2	ENSRNOT00000037432|AC110981.1|ENSRNOG00000026991|
rn6_v1_chr15_+_4475051_4475051	0.0957277	Nkx3-2	ENSRNOT00000008461|Kcnk16|ENSRNOG00000006422|potassium two pore domain channel subfamily K member 16 [Source:RGD Symbol%3BAcc:1582911]
rn6_v1_chr1_-_141481315_141481315	0.0917503	Nkx3-2	ENSRNOT00000020229|Pex11a|ENSRNOG00000015003|peroxisomal biogenesis factor 11 alpha [Source:RGD Symbol%3BAcc:619842]
rn6_v1_chr5_-_138222534_138222534	0.0908042	Nkx3-2	ENSRNOT00000009691|Zfp691|ENSRNOG00000007398|zinc finger protein 691 [Source:RGD Symbol%3BAcc:1308150]
rn6_v1_chr10_-_56558487_56558487	0.0903705	Nkx3-2	ENSRNOT00000023256|Slc2a4|ENSRNOG00000017226|solute carrier family 2 member 4 [Source:RGD Symbol%3BAcc:2711]
rn6_v1_chr12_-_13924531_13924531	0.0871775	Nkx3-2	ENSRNOT00000001477|Slc29a4|ENSRNOG00000001115|solute carrier family 29 member 4 [Source:RGD Symbol%3BAcc:1310545]
rn6_v1_chr12_+_37829579_37829579	0.0808042	Nkx3-2	ENSRNOT00000084587|Pitpnm2|ENSRNOG00000029260|phosphatidylinositol transfer protein%2C membrane-associated 2 [Source:RGD Symbol%3BAcc:1310867]
rn6_v1_chr18_+_60745035_60745035	0.0788283	Nkx3-2	ENSRNOT00000045098|LOC502176|ENSRNOG00000030321|hypothetical protein LOC502176 [Source:RGD Symbol%3BAcc:1560919]
rn6_v1_chr1_-_141504111_141504111	0.0754501	Nkx3-2	ENSRNOT00000040164|Snrpep2|ENSRNOG00000034206|small nuclear ribonucleoprotein polypeptide E pseudogene 2 [Source:RGD Symbol%3BAcc:2318883]
rn6_v1_chrX_-_71169865_71169865	0.0745521	Nkx3-2	ENSRNOT00000050415|Il2rg|ENSRNOG00000003954|interleukin 2 receptor subunit gamma [Source:RGD Symbol%3BAcc:621466]
rn6_v1_chr3_+_161018511_161018538	0.0729993	Nkx3-2	ENSRNOT00000019804|Wfdc2|ENSRNOG00000014739|WAP four-disulfide core domain 2 [Source:RGD Symbol%3BAcc:628757]	ENSRNOT00000039664|Wfdc2|ENSRNOG00000014739|WAP four-disulfide core domain 2 [Source:RGD Symbol%3BAcc:628757]
rn6_v1_chr1_+_240908483_240908483	0.0718629	Nkx3-2	ENSRNOT00000019367|Klf9|ENSRNOG00000014215|Kruppel-like factor 9 [Source:RGD Symbol%3BAcc:70934]
rn6_v1_chr5_+_129052043_129052043	0.0711901	Nkx3-2	ENSRNOT00000013459|LOC108348114|ENSRNOG00000009519|tetratricopeptide repeat protein 39A [Source:RGD Symbol%3BAcc:11387498]
rn6_v1_chr3_-_175426395_175426395	0.0706396	Nkx3-2	ENSRNOT00000082686|Psma7|ENSRNOG00000056853|proteasome subunit alpha 7 [Source:RGD Symbol%3BAcc:61851]
rn6_v1_chr3_+_172195844_172195844	0.0698823	Nkx3-2	ENSRNOT00000034915|Npepl1|ENSRNOG00000028384|aminopeptidase-like 1 [Source:RGD Symbol%3BAcc:1311351]
rn6_v1_chrX_-_115426083_115426083	0.0684342	Nkx3-2	ENSRNOT00000014756|AABR07040947.1|ENSRNOG00000011100|
rn6_v1_chrX_-_37353156_37353156	0.0670088	Nkx3-2	ENSRNOT00000086120|AABR07038021.1|ENSRNOG00000056631|
rn6_v1_chr6_+_55085313_55085313	0.0668045	Nkx3-2	ENSRNOT00000005458|AABR07063901.1|ENSRNOG00000004108|
rn6_v1_chr16_+_81665540_81665582	0.0661401	Nkx3-2	ENSRNOT00000026546|Grtp1|ENSRNOG00000061995|growth hormone regulated TBC protein 1 [Source:RGD Symbol%3BAcc:1309210]	ENSRNOT00000092644|Grtp1|ENSRNOG00000061995|growth hormone regulated TBC protein 1 [Source:RGD Symbol%3BAcc:1309210]	ENSRNOT00000073240|Grtp1|ENSRNOG00000061995|growth hormone regulated TBC protein 1 [Source:RGD Symbol%3BAcc:1309210]
rn6_v1_chr12_-_39667849_39667849	0.0648493	Nkx3-2	ENSRNOT00000011499|Arpc3|ENSRNOG00000008673|actin related protein 2/3 complex%2C subunit 3 [Source:RGD Symbol%3BAcc:1311985]
rn6_v1_chr18_+_51523758_51523758	0.06435	Nkx3-2	ENSRNOT00000078518|Gramd3|ENSRNOG00000015225|GRAM domain containing 3 [Source:RGD Symbol%3BAcc:1311016]
rn6_v1_chr17_-_90071408_90071408	0.0642597	Nkx3-2	ENSRNOT00000071978|Pdss1|ENSRNOG00000048849|decaprenyl diphosphate synthase subunit 1 [Source:RGD Symbol%3BAcc:2319976]
rn6_v1_chr15_-_23969011_23969011	0.0618567	Nkx3-2	ENSRNOT00000014821|Gch1|ENSRNOG00000011039|GTP cyclohydrolase 1 [Source:RGD Symbol%3BAcc:61992]
rn6_v1_chr1_-_219369587_219369587	0.0617264	Nkx3-2	ENSRNOT00000000599|Aip|ENSRNOG00000022289|aryl-hydrocarbon receptor-interacting protein [Source:RGD Symbol%3BAcc:628619]
rn6_v1_chr16_+_25773602_25773602	0.061635	Nkx3-2	ENSRNOT00000047750|Gapdh-ps2|ENSRNOG00000033057|glyceraldehyde-3-phosphate dehydrogenase%2C pseudogene 2 [Source:RGD Symbol%3BAcc:1589889]
rn6_v1_chr8_+_132120452_132120452	0.0607081	Nkx3-2	ENSRNOT00000055822|Tgm4|ENSRNOG00000004320|transglutaminase 4 [Source:RGD Symbol%3BAcc:620785]
rn6_v1_chr8_+_45561390_45561390	0.0606141	Nkx3-2	ENSRNOT00000047820|AABR07070043.1|ENSRNOG00000050630|
rn6_v1_chr18_-_63825408_63825408	0.0600809	Nkx3-2	ENSRNOT00000043709|RGD1562758|ENSRNOG00000048704|similar to glyceraldehyde-3-phosphate dehydrogenase [Source:RGD Symbol%3BAcc:1562758]
rn6_v1_chr2_+_244521699_244521699	0.0600603	Nkx3-2	ENSRNOT00000029382|Stpg2|ENSRNOG00000023457|sperm-tail PG-rich repeat containing 2 [Source:RGD Symbol%3BAcc:1591946]
rn6_v1_chr8_-_112648880_112648880	0.0588878	Nkx3-2	ENSRNOT00000015265|Ackr4|ENSRNOG00000011478|atypical chemokine receptor 4 [Source:RGD Symbol%3BAcc:1596453]
rn6_v1_chr7_-_119158173_119158201	0.0584214	Nkx3-2	ENSRNOT00000067483|Txn2|ENSRNOG00000005614|thioredoxin 2 [Source:RGD Symbol%3BAcc:71040]	ENSRNOT00000078528|Txn2|ENSRNOG00000005614|thioredoxin 2 [Source:RGD Symbol%3BAcc:71040]
rn6_v1_chr3_-_95007712_95007712	0.0566042	Nkx3-2	ENSRNOT00000017409|Eif3m|ENSRNOG00000012738|eukaryotic translation initiation factor 3%2C subunit M [Source:RGD Symbol%3BAcc:1565840]
rn6_v1_chr10_-_49196177_49196177	0.0565208	Nkx3-2	ENSRNOT00000084418|Zfp286a|ENSRNOG00000003218|zinc finger protein 286A [Source:RGD Symbol%3BAcc:1561950]
rn6_v1_chr2_-_189903219_189903219	0.0546561	Nkx3-2	ENSRNOT00000017000|S100a1|ENSRNOG00000012410|S100 calcium binding protein A1 [Source:RGD Symbol%3BAcc:3614]
rn6_v1_chr19_+_55300395_55300395	0.0540519	Nkx3-2	ENSRNOT00000092169|Ctu2|ENSRNOG00000051531|cytosolic thiouridylase subunit 2 [Source:RGD Symbol%3BAcc:1562594]
rn6_v1_chr14_-_115352562_115352562	0.052882	Nkx3-2	ENSRNOT00000050321|Erlec1|ENSRNOG00000007283|endoplasmic reticulum lectin 1 [Source:RGD Symbol%3BAcc:1306508]
rn6_v1_chr16_+_16949232_16949232	0.0528504	Nkx3-2	ENSRNOT00000047499|AABR07024795.1|ENSRNOG00000028958|
rn6_v1_chr7_-_29282039_29282039	0.0528339	Nkx3-2	ENSRNOT00000067777|RGD1561102|ENSRNOG00000043412|similar to ribosomal protein S12 [Source:RGD Symbol%3BAcc:1561102]
rn6_v1_chr5_+_156026911_156026911	0.0523672	Nkx3-2	ENSRNOT00000046802|Rap1gap|ENSRNOG00000013825|Rap1 GTPase-activating protein [Source:RGD Symbol%3BAcc:1309908]
rn6_v1_chr5_+_115649046_115649046	0.0520346	Nkx3-2	ENSRNOT00000041328|LOC108351137|ENSRNOG00000030963|glyceraldehyde-3-phosphate dehydrogenase [Source:RGD Symbol%3BAcc:11369796]
rn6_v1_chr6_+_128048099_128048174	0.0509053	Nkx3-2	ENSRNOT00000084685|LOC500712|ENSRNOG00000010478|Ab1-233 [Source:RGD Symbol%3BAcc:1562479]	ENSRNOT00000087017|LOC500712|ENSRNOG00000010478|Ab1-233 [Source:RGD Symbol%3BAcc:1562479]
rn6_v1_chr2_-_187863349_187863349	0.0500687	Nkx3-2	ENSRNOT00000084455|Lmna|ENSRNOG00000019638|lamin A/C [Source:RGD Symbol%3BAcc:620456]
rn6_v1_chr1_+_171592797_171592797	0.0492492	Nkx3-2	ENSRNOT00000026607|Syt9|ENSRNOG00000019613|synaptotagmin 9 [Source:RGD Symbol%3BAcc:621169]
rn6_v1_chr9_+_17784468_17784468	0.0483822	Nkx3-2	ENSRNOT00000026831|Slc29a1|ENSRNOG00000019752|solute carrier family 29 member 1 [Source:RGD Symbol%3BAcc:61899]
rn6_v1_chr2_-_166682325_166682325	0.0482521	Nkx3-2	ENSRNOT00000091198|Sptssb|ENSRNOG00000009388|serine palmitoyltransferase%2C small subunit B [Source:RGD Symbol%3BAcc:2324614]	ENSRNOT00000012422|Sptssb|ENSRNOG00000009388|serine palmitoyltransferase%2C small subunit B [Source:RGD Symbol%3BAcc:2324614]
rn6_v1_chr5_+_57267312_57267312	0.0470857	Nkx3-2	ENSRNOT00000011907|Chmp5|ENSRNOG00000008672|charged multivesicular body protein 5 [Source:RGD Symbol%3BAcc:1305968]
rn6_v1_chr5_-_164747083_164747083	0.0470248	Nkx3-2	ENSRNOT00000010433|Plod1|ENSRNOG00000007763|procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 1 [Source:RGD Symbol%3BAcc:621382]
rn6_v1_chr10_-_102289837_102289837	0.0465459	Nkx3-2	ENSRNOT00000044922|AABR07030729.1|ENSRNOG00000030224|
rn6_v1_chr6_-_78549669_78549669	0.0456403	Nkx3-2	ENSRNOT00000009940|Foxa1|ENSRNOG00000009284|forkhead box A1 [Source:RGD Symbol%3BAcc:2807]
rn6_v1_chr7_+_14643704_14643704	0.0450154	Nkx3-2	ENSRNOT00000044642|AABR07055875.1|ENSRNOG00000050603|
rn6_v1_chr9_+_73528681_73528681	0.0441709	Nkx3-2	ENSRNOT00000084340|Unc80|ENSRNOG00000028362|unc-80 homolog%2C NALCN activator [Source:RGD Symbol%3BAcc:1309976]
rn6_v1_chr9_+_62291809_62291809	0.0437869	Nkx3-2	ENSRNOT00000090621|Plcl1|ENSRNOG00000032659|phospholipase C-like 1 [Source:RGD Symbol%3BAcc:708420]
rn6_v1_chr5_-_135663284_135663299	0.0436988	Nkx3-2	ENSRNOT00000087237|Toe1|ENSRNOG00000017561|target of EGR1%2C member 1 (nuclear) [Source:RGD Symbol%3BAcc:1309094]	ENSRNOT00000066869|Toe1|ENSRNOG00000017561|target of EGR1%2C member 1 (nuclear) [Source:RGD Symbol%3BAcc:1309094]
rn6_v1_chr10_-_95431312_95431312	0.0436965	Nkx3-2	ENSRNOT00000085552|AABR07030603.2|ENSRNOG00000052459|
rn6_v1_chr7_+_59326518_59326518	0.0429377	Nkx3-2	ENSRNOT00000085231|Ptprb|ENSRNOG00000055293|protein tyrosine phosphatase%2C receptor type%2C B [Source:RGD Symbol%3BAcc:1305922]
rn6_v1_chr7_+_71023976_71023976	0.0426959	Nkx3-2	ENSRNOT00000005679|Tac3|ENSRNOG00000004229|tachykinin 3 [Source:RGD Symbol%3BAcc:3809]
rn6_v1_chr1_-_252550394_252550394	0.0423805	Nkx3-2	ENSRNOT00000083468|Acta2|ENSRNOG00000058039|actin%2C alpha 2%2C smooth muscle%2C aorta [Source:RGD Symbol%3BAcc:621676]
rn6_v1_chr1_+_84328114_84328114	0.0422602	Nkx3-2	ENSRNOT00000028266|Hipk4|ENSRNOG00000020835|homeodomain interacting protein kinase 4 [Source:RGD Symbol%3BAcc:1307541]
rn6_v1_chr3_-_105470475_105470475	0.0420311	Nkx3-2	ENSRNOT00000011078|Gjd2|ENSRNOG00000008337|gap junction protein%2C delta 2 [Source:RGD Symbol%3BAcc:2694]
rn6_v1_chr1_+_89220083_89220083	0.0408728	Nkx3-2	ENSRNOT00000093144|Dmkn|ENSRNOG00000055934|dermokine [Source:RGD Symbol%3BAcc:1561521]
rn6_v1_chr14_+_2789650_2789650	0.0405011	Nkx3-2	ENSRNOT00000030479|Fam69a|ENSRNOG00000023533|family with sequence similarity 69%2C member A [Source:RGD Symbol%3BAcc:1308581]
rn6_v1_chr2_+_243656579_243656579	0.0402101	Nkx3-2	ENSRNOT00000036993|Adh1|ENSRNOG00000012436|alcohol dehydrogenase 1 (class I) [Source:RGD Symbol%3BAcc:2044]
rn6_v1_chr9_-_81565416_81565416	0.0401288	Nkx3-2	ENSRNOT00000083582|Aamp|ENSRNOG00000014399|angio-associated%2C migratory cell protein [Source:RGD Symbol%3BAcc:1306281]
rn6_v1_chr3_+_122947913_122947913	0.0398359	Nkx3-2	ENSRNOT00000028821|Vps16|ENSRNOG00000021222|VPS16 CORVET/HOPS core subunit [Source:RGD Symbol%3BAcc:1359414]
rn6_v1_chr10_-_85725429_85725429	0.0396285	Nkx3-2	ENSRNOT00000005471|Rpl23|ENSRNOG00000004107|ribosomal protein L23 [Source:RGD Symbol%3BAcc:62067]
rn6_v1_chr2_+_151314818_151314818	0.0395862	Nkx3-2	ENSRNOT00000019305|P2ry1|ENSRNOG00000014232|purinergic receptor P2Y1 [Source:RGD Symbol%3BAcc:3242]
rn6_v1_chr9_-_81566096_81566096	0.0394796	Nkx3-2	ENSRNOT00000019497|Aamp|ENSRNOG00000014399|angio-associated%2C migratory cell protein [Source:RGD Symbol%3BAcc:1306281]
rn6_v1_chr3_-_102826379_102826379	0.0390674	Nkx3-2	ENSRNOT00000073423|Olr769|ENSRNOG00000050221|olfactory receptor 769 [Source:RGD Symbol%3BAcc:1333526]
rn6_v1_chr4_+_159410799_159410799	0.0388877	Nkx3-2	ENSRNOT00000079225|Akap3|ENSRNOG00000059227|A-kinase anchoring protein 3 [Source:RGD Symbol%3BAcc:1359735]
rn6_v1_chr1_-_64030175_64030175	0.038294	Nkx3-2	ENSRNOT00000089950|Tsen34l1|ENSRNOG00000055179|tRNA splicing endonuclease subunit 34-like 1 [Source:RGD Symbol%3BAcc:6503363]
rn6_v1_chrX_-_123662350_123662350	0.0379507	Nkx3-2	ENSRNOT00000092624|Sept6|ENSRNOG00000043182|septin 6 [Source:RGD Symbol%3BAcc:1585082]
rn6_v1_chr19_-_37912027_37912027	0.0375232	Nkx3-2	ENSRNOT00000026462|Psmb10|ENSRNOG00000019494|proteasome subunit beta 10 [Source:RGD Symbol%3BAcc:1307428]
rn6_v1_chr16_-_21089508_21089508	0.0366666	Nkx3-2	ENSRNOT00000072565|Hapln4|ENSRNOG00000049949|hyaluronan and proteoglycan link protein 4 [Source:RGD Symbol%3BAcc:1308408]
rn6_v1_chrX_-_45522665_45522665	0.0364215	Nkx3-2	ENSRNOT00000030771|RGD1562200|ENSRNOG00000026157|similar to GS2 gene [Source:RGD Symbol%3BAcc:1562200]
rn6_v1_chr10_-_88533171_88533171	0.0363193	Nkx3-2	ENSRNOT00000024321|Dnajc7|ENSRNOG00000017781|DnaJ heat shock protein family (Hsp40) member C7 [Source:RGD Symbol%3BAcc:1303226]
rn6_v1_chr10_-_89918427_89918427	0.0362743	Nkx3-2	ENSRNOT00000084217|Dusp3|ENSRNOG00000036798|dual specificity phosphatase 3 [Source:RGD Symbol%3BAcc:1560049]
rn6_v1_chr8_+_47674321_47674354	0.0358667	Nkx3-2	ENSRNOT00000026170|Trim29|ENSRNOG00000021771|tripartite motif-containing 29 [Source:RGD Symbol%3BAcc:1307858]	ENSRNOT00000078776|Trim29|ENSRNOG00000021771|tripartite motif-containing 29 [Source:RGD Symbol%3BAcc:1307858]
rn6_v1_chr1_+_170147300_170147300	0.0347466	Nkx3-2	ENSRNOT00000048075|Olr200|ENSRNOG00000048852|olfactory receptor 200 [Source:RGD Symbol%3BAcc:1334048]
rn6_v1_chr13_+_90514336_90514362	0.0344366	Nkx3-2	ENSRNOT00000088996|Pex19|ENSRNOG00000057116|peroxisomal biogenesis factor 19 [Source:RGD Symbol%3BAcc:1306913]	ENSRNOT00000085377|Pex19|ENSRNOG00000057116|peroxisomal biogenesis factor 19 [Source:RGD Symbol%3BAcc:1306913]
rn6_v1_chr9_+_98505259_98505259	0.0341106	Nkx3-2	ENSRNOT00000051810|Erfe|ENSRNOG00000024688|erythroferrone [Source:RGD Symbol%3BAcc:1584688]
rn6_v1_chr1_-_196884302_196884302	0.0340796	Nkx3-2	ENSRNOT00000089464|Nsmce1|ENSRNOG00000015218|NSE1 homolog%2C SMC5-SMC6 complex component [Source:RGD Symbol%3BAcc:1307760]
rn6_v1_chr12_-_23624212_23624316	0.0339408	Nkx3-2	ENSRNOT00000064405|Rasa4|ENSRNOG00000001431|RAS p21 protein activator 4 [Source:RGD Symbol%3BAcc:1565457]	ENSRNOT00000001943|Rasa4|ENSRNOG00000001431|RAS p21 protein activator 4 [Source:RGD Symbol%3BAcc:1565457]
rn6_v1_chr1_-_256813711_256813711	0.033902	Nkx3-2	ENSRNOT00000021055|Rbp4|ENSRNOG00000015518|retinol binding protein 4 [Source:RGD Symbol%3BAcc:3546]
rn6_v1_chr3_+_118317761_118317761	0.0319209	Nkx3-2	ENSRNOT00000012700|Fgf7|ENSRNOG00000009425|fibroblast growth factor 7 [Source:RGD Symbol%3BAcc:61805]
rn6_v1_chr3_+_40038336_40038336	0.0315975	Nkx3-2	ENSRNOT00000048804|Galnt13|ENSRNOG00000005335|polypeptide N-acetylgalactosaminyltransferase 13 [Source:RGD Symbol%3BAcc:735044]
rn6_v1_chr7_-_107616038_107616038	0.0314198	Nkx3-2	ENSRNOT00000088752|Sla|ENSRNOG00000056714|src-like adaptor [Source:RGD Symbol%3BAcc:631373]
rn6_v1_chr13_-_111765944_111765944	0.0310618	Nkx3-2	ENSRNOT00000073041|Syt14|ENSRNOG00000046139|synaptotagmin 14 [Source:RGD Symbol%3BAcc:1592654]
rn6_v1_chr1_-_201082727_201082727	0.0301589	Nkx3-2	ENSRNOT00000079342|Ate1|ENSRNOG00000024414|arginyltransferase 1 [Source:RGD Symbol%3BAcc:1309335]
rn6_v1_chr11_-_87081950_87081950	0.0300173	Nkx3-2	ENSRNOT00000002574|Dgcr6|ENSRNOG00000001880|DiGeorge syndrome critical region gene 6 [Source:RGD Symbol%3BAcc:1309390]
rn6_v1_chr16_-_64745207_64745207	0.0298925	Nkx3-2	ENSRNOT00000032467|Tti2|ENSRNOG00000023494|TELO2 interacting protein 2 [Source:RGD Symbol%3BAcc:1310414]
rn6_v1_chr12_-_46845079_46845080	0.0296421	Nkx3-2	ENSRNOT00000047466|Pxn|ENSRNOG00000001149|paxillin [Source:RGD Symbol%3BAcc:1305759]	ENSRNOT00000064115|Pxn|ENSRNOG00000001149|paxillin [Source:RGD Symbol%3BAcc:1305759]
rn6_v1_chr19_+_38669230_38669230	0.0295843	Nkx3-2	ENSRNOT00000027273|Cdh3|ENSRNOG00000020129|cadherin 3 [Source:RGD Symbol%3BAcc:621089]
rn6_v1_chr3_-_161812243_161812291	0.0295185	Nkx3-2	ENSRNOT00000025238|Slc35c2|ENSRNOG00000018649|solute carrier family 35 member C2 [Source:RGD Symbol%3BAcc:1311250]	ENSRNOT00000087646|Slc35c2|ENSRNOG00000018649|solute carrier family 35 member C2 [Source:RGD Symbol%3BAcc:1311250]
rn6_v1_chr5_+_70441123_70441123	0.0294407	Nkx3-2	ENSRNOT00000087517|Fsd1l|ENSRNOG00000059876|fibronectin type III and SPRY domain containing 1-like [Source:RGD Symbol%3BAcc:1564809]
rn6_v1_chr6_-_1319541_1319541	0.0288393	Nkx3-2	ENSRNOT00000006527|Strn|ENSRNOG00000004806|striatin [Source:RGD Symbol%3BAcc:3782]
rn6_v1_chr8_-_55194692_55194692	0.0285066	Nkx3-2	ENSRNOT00000068366|RGD1564937|ENSRNOG00000030962|similar to RIKEN cDNA 1110032A03 [Source:RGD Symbol%3BAcc:1564937]
rn6_v1_chr4_-_120784807_120784807	0.0279756	Nkx3-2	ENSRNOT00000021445|Abtb1|ENSRNOG00000015762|ankyrin repeat and BTB domain containing 1 [Source:RGD Symbol%3BAcc:1359363]
rn6_v1_chr7_+_29282305_29282305	0.0277337	Nkx3-2	ENSRNOT00000007623|Arl1|ENSRNOG00000005763|ADP-ribosylation factor like GTPase 1 [Source:RGD Symbol%3BAcc:621326]
rn6_v1_chr10_+_104368247_104368247	0.0277305	Nkx3-2	ENSRNOT00000006519|Llgl2|ENSRNOG00000004834|LLGL2%2C scribble cell polarity complex component [Source:RGD Symbol%3BAcc:1560307]
rn6_v1_chr10_-_88533829_88533829	0.0276255	Nkx3-2	ENSRNOT00000080521|Dnajc7|ENSRNOG00000017781|DnaJ heat shock protein family (Hsp40) member C7 [Source:RGD Symbol%3BAcc:1303226]
rn6_v1_chrX_+_15295473_15295473	0.0270566	Nkx3-2	ENSRNOT00000009295|LOC108348065|ENSRNOG00000048738|histone deacetylase 6 [Source:RGD Symbol%3BAcc:11442569]
rn6_v1_chr10_+_85646633_85646633	0.0268764	Nkx3-2	ENSRNOT00000086608|Psmb3|ENSRNOG00000052730|proteasome subunit beta 3 [Source:RGD Symbol%3BAcc:61875]
rn6_v1_chr6_+_55648021_55648051	0.026849	Nkx3-2	ENSRNOT00000064822|Ankmy2|ENSRNOG00000005623|ankyrin repeat and MYND domain containing 2 [Source:RGD Symbol%3BAcc:1306017]	ENSRNOT00000091488|Ankmy2|ENSRNOG00000005623|ankyrin repeat and MYND domain containing 2 [Source:RGD Symbol%3BAcc:1306017]
rn6_v1_chr4_+_129574264_129574264	0.0268363	Nkx3-2	ENSRNOT00000010185|Arl6ip5|ENSRNOG00000006818|ADP-ribosylation factor like GTPase 6 interacting protein 5 [Source:RGD Symbol%3BAcc:708572]
rn6_v1_chrX_+_159703578_159703578	0.0263317	Nkx3-2	ENSRNOT00000001162|Cd40lg|ENSRNOG00000000871|CD40 ligand [Source:RGD Symbol%3BAcc:708418]
rn6_v1_chr6_+_128073344_128073344	0.0262894	Nkx3-2	ENSRNOT00000014073|LOC500712|ENSRNOG00000010478|Ab1-233 [Source:RGD Symbol%3BAcc:1562479]
rn6_v1_chr1_-_282251257_282251257	0.0259371	Nkx3-2	ENSRNOT00000015186|Prdx3|ENSRNOG00000010958|peroxiredoxin 3 [Source:RGD Symbol%3BAcc:620040]
rn6_v1_chr2_-_157759819_157759838	0.0257823	Nkx3-2	ENSRNOT00000015763|LOC100909712|ENSRNOG00000011586|cyclin-L1-like [Source:RGD Symbol%3BAcc:6501887]	ENSRNOT00000016016|LOC100909712|ENSRNOG00000011586|cyclin-L1-like [Source:RGD Symbol%3BAcc:6501887]
rn6_v1_chr10_-_18942540_18942540	0.025775	Nkx3-2	ENSRNOT00000007187|Kcnip1|ENSRNOG00000005365|potassium voltage-gated channel interacting protein 1 [Source:RGD Symbol%3BAcc:70886]
rn6_v1_chr5_+_148577332_148577332	0.0257575	Nkx3-2	ENSRNOT00000016325|Snrnp40|ENSRNOG00000012219|small nuclear ribonucleoprotein U5 subunit 40 [Source:RGD Symbol%3BAcc:1309198]
rn6_v1_chr5_+_167288717_167288717	0.0254322	Nkx3-2	ENSRNOT00000024106|Eno1|ENSRNOG00000017895|enolase 1 [Source:RGD Symbol%3BAcc:2553]
rn6_v1_chr2_-_196479770_196479770	0.0244893	Nkx3-2	ENSRNOT00000028693|Anxa9|ENSRNOG00000021134|annexin A9 [Source:RGD Symbol%3BAcc:1587550]
rn6_v1_chr4_+_14039977_14039977	0.0241105	Nkx3-2	ENSRNOT00000091249|Cd36|ENSRNOG00000040108|CD36 molecule [Source:RGD Symbol%3BAcc:2301]	ENSRNOT00000075878|Cd36|ENSRNOG00000040108|CD36 molecule [Source:RGD Symbol%3BAcc:2301]
rn6_v1_chr1_-_57518458_57518458	0.0240344	Nkx3-2	ENSRNOT00000002040|Pdcd2|ENSRNOG00000001490|programmed cell death 2 [Source:RGD Symbol%3BAcc:61887]
rn6_v1_chr5_+_79367663_79367663	0.0238349	Nkx3-2	ENSRNOT00000011508|Atp6v1g1|ENSRNOG00000008163|ATPase H+ transporting V1 subunit G1 [Source:RGD Symbol%3BAcc:1310088]
rn6_v1_chr17_-_21577631_21577631	0.0237869	Nkx3-2	ENSRNOT00000066371|Tmem14c|ENSRNOG00000015437|transmembrane protein 14C [Source:RGD Symbol%3BAcc:621692]
rn6_v1_chr1_+_142060955_142060955	0.0237122	Nkx3-2	ENSRNOT00000017862|Vps33b|ENSRNOG00000013149|VPS33B%2C late endosome and lysosome associated [Source:RGD Symbol%3BAcc:620644]
rn6_v1_chr15_+_7871497_7871497	0.0236086	Nkx3-2	ENSRNOT00000046879|Ube2e2|ENSRNOG00000032690|ubiquitin-conjugating enzyme E2E 2 [Source:RGD Symbol%3BAcc:1305644]
rn6_v1_chr11_+_75434197_75434197	0.0234329	Nkx3-2	ENSRNOT00000032569|Mb21d2|ENSRNOG00000024040|Mab-21 domain containing 2 [Source:RGD Symbol%3BAcc:1559643]
rn6_v1_chr7_+_14743008_14743008	0.0231217	Nkx3-2	ENSRNOT00000055284|AABR07055878.1|ENSRNOG00000046286|
rn6_v1_chr1_-_80809769_80809769	0.0231133	Nkx3-2	ENSRNOT00000045073|Ceacam19|ENSRNOG00000043088|carcinoembryonic antigen-related cell adhesion molecule 19 [Source:RGD Symbol%3BAcc:1589436]
rn6_v1_chrX_+_122724129_122724129	0.0230212	Nkx3-2	ENSRNOT00000017746|LOC100360218|ENSRNOG00000013170|interleukin 13 receptor%2C alpha 1-like [Source:RGD Symbol%3BAcc:2322532]
rn6_v1_chr1_+_42121636_42121636	0.0226571	Nkx3-2	ENSRNOT00000025616|Myct1|ENSRNOG00000018858|myc target 1 [Source:RGD Symbol%3BAcc:1311467]
rn6_v1_chr9_-_70450170_70450170	0.0221985	Nkx3-2	ENSRNOT00000017207|Mdh1b|ENSRNOG00000012891|malate dehydrogenase 1B [Source:RGD Symbol%3BAcc:1307874]
rn6_v1_chr6_-_55647665_55647665	0.0212436	Nkx3-2	ENSRNOT00000007414|Bzw2|ENSRNOG00000005096|basic leucine zipper and W2 domains 2 [Source:RGD Symbol%3BAcc:621507]
rn6_v1_chr1_-_153740905_153740905	0.0211722	Nkx3-2	ENSRNOT00000023239|Prss23|ENSRNOG00000017307|protease%2C serine%2C 23 [Source:RGD Symbol%3BAcc:1359545]
rn6_v1_chr4_-_165026414_165026414	0.0211453	Nkx3-2	ENSRNOT00000071421|Klra1|ENSRNOG00000051489|killer cell lectin-like receptor%2C subfamily A%2C member 1 [Source:RGD Symbol%3BAcc:1359586]
rn6_v1_chr3_+_93968855_93968855	0.0210754	Nkx3-2	ENSRNOT00000014478|Fbxo3|ENSRNOG00000009549|F-box protein 3 [Source:RGD Symbol%3BAcc:1593433]
rn6_v1_chr8_-_90664554_90664554	0.0206264	Nkx3-2	ENSRNOT00000039917|Hmgn3|ENSRNOG00000031032|high mobility group nucleosomal binding domain 3 [Source:RGD Symbol%3BAcc:1359106]	ENSRNOT00000074896|Hmgn3|ENSRNOG00000031032|high mobility group nucleosomal binding domain 3 [Source:RGD Symbol%3BAcc:1359106]	ENSRNOT00000072225|Hmgn3|ENSRNOG00000031032|high mobility group nucleosomal binding domain 3 [Source:RGD Symbol%3BAcc:1359106]
rn6_v1_chr1_-_67065797_67065797	0.0205905	Nkx3-2	ENSRNOT00000048152|Vom1r46|ENSRNOG00000032817|vomeronasal 1 receptor 46 [Source:RGD Symbol%3BAcc:1359306]
rn6_v1_chr13_-_99287887_99287887	0.0198858	Nkx3-2	ENSRNOT00000004780|Ephx1|ENSRNOG00000003515|epoxide hydrolase 1 [Source:RGD Symbol%3BAcc:2557]
rn6_v1_chrX_+_25016401_25016401	0.0196271	Nkx3-2	ENSRNOT00000059270|Clcn4|ENSRNOG00000003533|chloride voltage-gated channel 4 [Source:RGD Symbol%3BAcc:708381]
rn6_v1_chr10_-_78690857_78690857	0.0194031	Nkx3-2	ENSRNOT00000089255|LOC303448|ENSRNOG00000054719|similar to glyceraldehyde-3-phosphate dehydrogenase [Source:RGD Symbol%3BAcc:1566089]
rn6_v1_chr1_+_100832324_100832324	0.0193572	Nkx3-2	ENSRNOT00000056364|Il4i1|ENSRNOG00000020148|interleukin 4 induced 1 [Source:RGD Symbol%3BAcc:1304831]
rn6_v1_chr3_+_79729739_79729739	0.0192582	Nkx3-2	ENSRNOT00000084833|Kbtbd4|ENSRNOG00000009397|kelch repeat and BTB domain containing 4 [Source:RGD Symbol%3BAcc:1310234]
rn6_v1_chrX_+_34623405_34623405	0.0191757	Nkx3-2	ENSRNOT00000041924|Nhs|ENSRNOG00000030759|NHS actin remodeling regulator [Source:RGD Symbol%3BAcc:1561818]
rn6_v1_chr10_+_88326080_88326080	0.0190791	Nkx3-2	ENSRNOT00000076475|Fkbp10|ENSRNOG00000015941|FK506 binding protein 10 [Source:RGD Symbol%3BAcc:1549751]
rn6_v1_chr5_-_75319189_75319189	0.0189468	Nkx3-2	ENSRNOT00000047200|Svep1|ENSRNOG00000033110|sushi%2C von Willebrand factor type A%2C EGF and pentraxin domain containing 1 [Source:RGD Symbol%3BAcc:1588987]
rn6_v1_chr10_-_86355006_86355006	0.0189308	Nkx3-2	ENSRNOT00000075076|Pgap3|ENSRNOG00000046143|post-GPI attachment to proteins 3 [Source:RGD Symbol%3BAcc:1592386]
rn6_v1_chr3_-_82777814_82777814	0.0188063	Nkx3-2	ENSRNOT00000068585|Accsl|ENSRNOG00000042533|1-aminocyclopropane-1-carboxylate synthase-like [Source:RGD Symbol%3BAcc:1596039]
rn6_v1_chr8_-_83693472_83693472	0.0187902	Nkx3-2	ENSRNOT00000015947|Fam83b|ENSRNOG00000011925|family with sequence similarity 83%2C member B [Source:RGD Symbol%3BAcc:1311988]
rn6_v1_chr3_+_132052612_132052612	0.0187862	Nkx3-2	ENSRNOT00000030148|AABR07053879.1|ENSRNOG00000027574|
rn6_v1_chr8_-_107819050_107819050	0.0186891	Nkx3-2	ENSRNOT00000019536|Armc8|ENSRNOG00000014521|armadillo repeat containing 8 [Source:RGD Symbol%3BAcc:1310477]
rn6_v1_chr4_+_62019970_62019970	0.0184656	Nkx3-2	ENSRNOT00000013133|LOC100910708|ENSRNOG00000027433|aldose reductase-related protein 1-like [Source:RGD Symbol%3BAcc:6496873]
rn6_v1_chr3_-_52998650_52998650	0.0181743	Nkx3-2	ENSRNOT00000009988|RGD1560831|ENSRNOG00000007605|similar to 40S ribosomal protein S3 [Source:RGD Symbol%3BAcc:1560831]
rn6_v1_chr8_-_109576353_109576353	0.0180565	Nkx3-2	ENSRNOT00000010320|Ppp2r3a|ENSRNOG00000022999|protein phosphatase 2%2C regulatory subunit B''%2C alpha [Source:RGD Symbol%3BAcc:1306958]
rn6_v1_chr6_+_108167716_108167716	0.0178322	Nkx3-2	ENSRNOT00000064426|Lin52|ENSRNOG00000043441|lin-52 DREAM MuvB core complex component [Source:RGD Symbol%3BAcc:1306798]
rn6_v1_chr7_-_59514939_59514939	0.0172357	Nkx3-2	ENSRNOT00000085579|Kcnmb4|ENSRNOG00000054458|potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:RGD Symbol%3BAcc:620728]
rn6_v1_chr3_+_57770948_57770948	0.0171007	Nkx3-2	ENSRNOT00000038429|AC107446.2|ENSRNOG00000047948|
rn6_v1_chr8_-_109418872_109418872	0.0170315	Nkx3-2	ENSRNOT00000021657|Pccb|ENSRNOG00000015869|propionyl-CoA carboxylase beta subunit [Source:RGD Symbol%3BAcc:3265]
rn6_v1_chr9_+_81566074_81566074	0.0170098	Nkx3-2	ENSRNOT00000074131|Pnkd|ENSRNOG00000014806|paroxysmal nonkinesigenic dyskinesia [Source:RGD Symbol%3BAcc:2300155]	ENSRNOT00000046229|Pnkd|ENSRNOG00000014806|paroxysmal nonkinesigenic dyskinesia [Source:RGD Symbol%3BAcc:2300155]	ENSRNOT00000090383|Pnkd|ENSRNOG00000014806|paroxysmal nonkinesigenic dyskinesia [Source:RGD Symbol%3BAcc:2300155]
rn6_v1_chr2_-_171196395_171196395	0.0168804	Nkx3-2	ENSRNOT00000013279|Bche|ENSRNOG00000009826|butyrylcholinesterase [Source:RGD Symbol%3BAcc:619996]
rn6_v1_chr1_-_220136470_220136470	0.01605	Nkx3-2	ENSRNOT00000026812|Actn3|ENSRNOG00000019745|actinin alpha 3 [Source:RGD Symbol%3BAcc:621792]
rn6_v1_chr4_+_109477920_109477920	0.0159843	Nkx3-2	ENSRNOT00000008468|Reg3a|ENSRNOG00000006360|regenerating islet-derived 3 alpha [Source:RGD Symbol%3BAcc:621401]
rn6_v1_chrX_+_14358224_14358224	0.0159027	Nkx3-2	ENSRNOT00000005042|Lancl3|ENSRNOG00000003756|LanC like 3 [Source:RGD Symbol%3BAcc:1563642]
rn6_v1_chr13_+_82355886_82355886	0.0158682	Nkx3-2	ENSRNOT00000076757|Sele|ENSRNOG00000002723|selectin E [Source:RGD Symbol%3BAcc:3654]
rn6_v1_chr20_-_4935372_4935414	0.0158308	Nkx3-2	ENSRNOT00000050099|RT1-CE3|ENSRNOG00000031607|RT1 class I%2C locus CE3 [Source:RGD Symbol%3BAcc:1598231]	ENSRNOT00000047779|RT1-CE4|ENSRNOG00000039744|RT1 class I%2C locus CE4 [Source:RGD Symbol%3BAcc:1598234]
rn6_v1_chr10_+_70242874_70242874	0.0156269	Nkx3-2	ENSRNOT00000010924|Fndc8|ENSRNOG00000008264|fibronectin type III domain containing 8 [Source:RGD Symbol%3BAcc:1310708]
rn6_v1_chr19_-_41029206_41029206	0.0153049	Nkx3-2	ENSRNOT00000023383|Vac14|ENSRNOG00000017219|Vac14%2C PIKFYVE complex component [Source:RGD Symbol%3BAcc:631410]
rn6_v1_chr14_-_85398532_85398532	0.0146606	Nkx3-2	ENSRNOT00000057361|Emid1|ENSRNOG00000033575|EMI domain containing 1 [Source:RGD Symbol%3BAcc:1593795]
rn6_v1_chr18_+_30574627_30574627	0.0146315	Nkx3-2	ENSRNOT00000060484|Pcdhb19|ENSRNOG00000039469|protocadherin beta 19 [Source:RGD Symbol%3BAcc:1549697]
rn6_v1_chr16_-_52127591_52127591	0.014491	Nkx3-2	ENSRNOT00000033652|Triml2|ENSRNOG00000028299|tripartite motif family-like 2 [Source:RGD Symbol%3BAcc:1565382]
rn6_v1_chr4_+_115713004_115713004	0.01443	Nkx3-2	ENSRNOT00000064536|Dysf|ENSRNOG00000032788|dysferlin [Source:RGD Symbol%3BAcc:1311023]
rn6_v1_chr16_-_49574314_49574390	0.0141234	Nkx3-2	ENSRNOT00000017568|Pdlim3|ENSRNOG00000012658|PDZ and LIM domain 3 [Source:RGD Symbol%3BAcc:620427]	ENSRNOT00000085535|Pdlim3|ENSRNOG00000012658|PDZ and LIM domain 3 [Source:RGD Symbol%3BAcc:620427]	ENSRNOT00000017054|Pdlim3|ENSRNOG00000012658|PDZ and LIM domain 3 [Source:RGD Symbol%3BAcc:620427]
rn6_v1_chr5_-_148577292_148577292	0.0140392	Nkx3-2	ENSRNOT00000017156|Zcchc17|ENSRNOG00000012266|zinc finger CCHC-type containing 17 [Source:RGD Symbol%3BAcc:1565267]
rn6_v1_chr17_+_57075218_57075218	0.0139457	Nkx3-2	ENSRNOT00000089536|Crem|ENSRNOG00000014900|cAMP responsive element modulator [Source:RGD Symbol%3BAcc:2402]
rn6_v1_chr13_+_82355471_82355471	0.0138347	Nkx3-2	ENSRNOT00000030677|Sele|ENSRNOG00000002723|selectin E [Source:RGD Symbol%3BAcc:3654]
rn6_v1_chr6_+_27589657_27589657	0.0137954	Nkx3-2	ENSRNOT00000038649|Hadha|ENSRNOG00000024629|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein)%2C alpha subunit [Source:RGD Symbol%3BAcc:620512]
rn6_v1_chrX_-_135521598_135521598	0.0136853	Nkx3-2	ENSRNOT00000033619|Gpr119|ENSRNOG00000024517|G protein-coupled receptor 119 [Source:RGD Symbol%3BAcc:727808]
rn6_v1_chr4_+_115712850_115712850	0.0134462	Nkx3-2	ENSRNOT00000085765|Dysf|ENSRNOG00000032788|dysferlin [Source:RGD Symbol%3BAcc:1311023]
rn6_v1_chr18_+_86307646_86307646	0.0132938	Nkx3-2	ENSRNOT00000091778|Cd226|ENSRNOG00000038197|CD226 molecule [Source:RGD Symbol%3BAcc:1311513]
rn6_v1_chr4_+_119997268_119997268	0.0131612	Nkx3-2	ENSRNOT00000073429|Rpn1|ENSRNOG00000046345|ribophorin I [Source:RGD Symbol%3BAcc:3594]
rn6_v1_chr18_+_30509393_30509393	0.0131444	Nkx3-2	ENSRNOT00000043846|Pcdhb12|ENSRNOG00000033719|protocadherin beta 12 [Source:RGD Symbol%3BAcc:3266]
rn6_v1_chr3_+_11476883_11476883	0.0130243	Nkx3-2	ENSRNOT00000072241|Naif1|ENSRNOG00000050204|nuclear apoptosis inducing factor 1 [Source:RGD Symbol%3BAcc:1597546]
rn6_v1_chr9_-_10710648_10710648	0.0129262	Nkx3-2	ENSRNOT00000089374|Kdm4b|ENSRNOG00000049221|lysine demethylase 4B [Source:RGD Symbol%3BAcc:1588576]
rn6_v1_chr14_+_22375955_22375978	0.0128476	Nkx3-2	ENSRNOT00000063915|Ugt2b37|ENSRNOG00000046540|UDP-glucuronosyltransferase 2 family%2C member 37 [Source:RGD Symbol%3BAcc:3937]	ENSRNOT00000034784|Ugt2b37|ENSRNOG00000046540|UDP-glucuronosyltransferase 2 family%2C member 37 [Source:RGD Symbol%3BAcc:3937]
rn6_v1_chr10_+_88326337_88326443	0.0127255	Nkx3-2	ENSRNOT00000022029|Fkbp10|ENSRNOG00000015941|FK506 binding protein 10 [Source:RGD Symbol%3BAcc:1549751]	ENSRNOT00000076461|Fkbp10|ENSRNOG00000015941|FK506 binding protein 10 [Source:RGD Symbol%3BAcc:1549751]
rn6_v1_chr10_+_105568091_105568091	0.0126865	Nkx3-2	ENSRNOT00000015221|Aanat|ENSRNOG00000011182|aralkylamine N-acetyltransferase [Source:RGD Symbol%3BAcc:2006]
rn6_v1_chr4_-_27726943_27726943	0.0122628	Nkx3-2	ENSRNOT00000068499|LOC500007|ENSRNOG00000009135|similar to EF hand calcium binding domain 1 [Source:RGD Symbol%3BAcc:1588445]
rn6_v1_chr12_-_52396066_52396066	0.0119785	Nkx3-2	ENSRNOT00000056712|Lrcol1|ENSRNOG00000037466|leucine rich colipase-like 1 [Source:RGD Symbol%3BAcc:2323402]
rn6_v1_chr7_+_98432024_98432024	0.0119387	Nkx3-2	ENSRNOT00000091077|Fer1l6|ENSRNOG00000025300|fer-1-like family member 6 [Source:RGD Symbol%3BAcc:1564703]
rn6_v1_chr11_-_81757813_81757813	0.0117611	Nkx3-2	ENSRNOT00000002462|Dnajb11|ENSRNOG00000001803|DnaJ heat shock protein family (Hsp40) member B11 [Source:RGD Symbol%3BAcc:1307373]
rn6_v1_chr19_+_56243408_56243408	0.0117156	Nkx3-2	ENSRNOT00000000281|Def8|ENSRNOG00000000264|differentially expressed in FDCP 8 homolog [Source:RGD Symbol%3BAcc:1309008]
rn6_v1_chr2_-_200625434_200625434	0.011684	Nkx3-2	ENSRNOT00000079754|Hsd3b5|ENSRNOG00000019417|hydroxy-delta-5-steroid dehydrogenase%2C 3 beta- and steroid delta-isomerase 5 [Source:RGD Symbol%3BAcc:2838]
rn6_v1_chr7_-_15706893_15706893	0.0115744	Nkx3-2	ENSRNOT00000042742|Olr1092|ENSRNOG00000046735|olfactory receptor 1092 [Source:RGD Symbol%3BAcc:1332867]
rn6_v1_chr19_-_55300403_55300403	0.0113142	Nkx3-2	ENSRNOT00000018591|Rnf166|ENSRNOG00000013777|ring finger protein 166 [Source:RGD Symbol%3BAcc:1302950]
rn6_v1_chr1_+_80426918_80426918	0.0104588	Nkx3-2	ENSRNOT00000067272|Nkpd1|ENSRNOG00000043378|NTPase%2C KAP family P-loop domain containing 1 [Source:RGD Symbol%3BAcc:1591760]
rn6_v1_chr2_-_187302691_187302691	0.0101714	Nkx3-2	ENSRNOT00000015793|Rrnad1|ENSRNOG00000011645|ribosomal RNA adenine dimethylase domain containing 1 [Source:RGD Symbol%3BAcc:1311265]
rn6_v1_chr10_-_1744647_1744647	0.00984358	Nkx3-2	ENSRNOT00000081886|AABR07028997.1|ENSRNOG00000057978|
rn6_v1_chr18_+_35121967_35121967	0.00974862	Nkx3-2	ENSRNOT00000017522|Spink5|ENSRNOG00000013116|serine peptidase inhibitor%2C Kazal type 5 [Source:RGD Symbol%3BAcc:1306540]
rn6_v1_chr9_-_10182676_10182676	0.00956823	Nkx3-2	ENSRNOT00000074894|LOC316124|ENSRNOG00000047549|similar to gonadotropin-regulated long chain acyl-CoA synthetase [Source:RGD Symbol%3BAcc:1595856]
rn6_v1_chr11_-_75144903_75144903	0.00919981	Nkx3-2	ENSRNOT00000002329|Hrasls|ENSRNOG00000001711|HRAS-like suppressor [Source:RGD Symbol%3BAcc:1309485]
rn6_v1_chr13_-_76660245_76660245	0.00878386	Nkx3-2	ENSRNOT00000039210|Pappa2|ENSRNOG00000042860|pappalysin 2 [Source:RGD Symbol%3BAcc:1591785]
rn6_v1_chr1_+_229267916_229267944	0.00855113	Nkx3-2	ENSRNOT00000073717|LOC100910851|ENSRNOG00000048953|serine protease inhibitor Kazal-type 5-like [Source:RGD Symbol%3BAcc:6496266]	ENSRNOT00000082670|LOC100910851|ENSRNOG00000048953|serine protease inhibitor Kazal-type 5-like [Source:RGD Symbol%3BAcc:6496266]	ENSRNOT00000076941|LOC100910851|ENSRNOG00000048953|serine protease inhibitor Kazal-type 5-like [Source:RGD Symbol%3BAcc:6496266]
rn6_v1_chr1_+_199225100_199225100	0.00838994	Nkx3-2	ENSRNOT00000088606|Setd1a|ENSRNOG00000055028|SET domain containing 1A [Source:RGD Symbol%3BAcc:1311624]
rn6_v1_chr1_+_59765835_59765835	0.00815461	Nkx3-2	ENSRNOT00000014842|Fpr1|ENSRNOG00000011174|formyl peptide receptor 1 [Source:RGD Symbol%3BAcc:1310883]
rn6_v1_chr5_-_124403195_124403195	0.00809664	Nkx3-2	ENSRNOT00000067850|C8a|ENSRNOG00000007697|complement C8 alpha chain [Source:RGD Symbol%3BAcc:1308355]
rn6_v1_chr7_-_26984400_26984400	0.00780397	Nkx3-2	ENSRNOT00000013613|Txnrd1|ENSRNOG00000009088|thioredoxin reductase 1 [Source:RGD Symbol%3BAcc:61959]
rn6_v1_chr8_+_33514042_33514042	0.00774259	Nkx3-2	ENSRNOT00000081614|Kcnj1|ENSRNOG00000059005|potassium voltage-gated channel subfamily J member 1 [Source:RGD Symbol%3BAcc:2957]	ENSRNOT00000081525|Kcnj1|ENSRNOG00000059005|potassium voltage-gated channel subfamily J member 1 [Source:RGD Symbol%3BAcc:2957]
rn6_v1_chr10_+_65454658_65454658	0.00745525	Nkx3-2	ENSRNOT00000037048|Proca1|ENSRNOG00000023381|protein interacting with cyclin A1 [Source:RGD Symbol%3BAcc:1561727]
rn6_v1_chr11_+_86092468_86092468	0.00719803	Nkx3-2	ENSRNOT00000057971|LOC100361706|ENSRNOG00000050000|lambda-chain C1-region-like [Source:RGD Symbol%3BAcc:2319568]
rn6_v1_chr9_-_86103158_86103158	0.00711914	Nkx3-2	ENSRNOT00000021528|Cul3|ENSRNOG00000015633|cullin 3 [Source:RGD Symbol%3BAcc:1308190]
rn6_v1_chr8_-_130475320_130475320	0.00695184	Nkx3-2	ENSRNOT00000075439|Ccdc13|ENSRNOG00000025643|coiled-coil domain containing 13 [Source:RGD Symbol%3BAcc:1586605]
rn6_v1_chr7_-_14054639_14054639	0.006131	Nkx3-2	ENSRNOT00000039852|Ilvbl|ENSRNOG00000028512|ilvB acetolactate synthase like [Source:RGD Symbol%3BAcc:1307988]
rn6_v1_chr18_+_57654290_57654290	0.0060267	Nkx3-2	ENSRNOT00000025892|Htr4|ENSRNOG00000019134|5-hydroxytryptamine receptor 4 [Source:RGD Symbol%3BAcc:2850]
rn6_v1_chr8_-_21458379_21458379	0.00597696	Nkx3-2	ENSRNOT00000038084|Zfp26|ENSRNOG00000025937|zinc finger protein 26 [Source:RGD Symbol%3BAcc:1565847]
rn6_v1_chr1_+_234183427_234183427	0.00500825	Nkx3-2	ENSRNOT00000050860|AABR07006451.1|ENSRNOG00000029732|
rn6_v1_chr3_+_147358858_147358858	0.00477222	Nkx3-2	ENSRNOT00000012951|Rspo4|ENSRNOG00000009662|R-spondin 4 [Source:RGD Symbol%3BAcc:1563415]
rn6_v1_chr4_+_99449111_99449111	0.004436	Nkx3-2	ENSRNOT00000010253|Chmp3|ENSRNOG00000007356|charged multivesicular body protein 3 [Source:RGD Symbol%3BAcc:708556]
rn6_v1_chr14_-_23002011_23002011	0.00443091	Nkx3-2	ENSRNOT00000002736|Ythdc1|ENSRNOG00000001996|YTH domain containing 1 [Source:RGD Symbol%3BAcc:621706]
rn6_v1_chr4_+_109467272_109467272	0.00435142	Nkx3-2	ENSRNOT00000008212|Reg3b|ENSRNOG00000006151|regenerating family member 3 beta [Source:RGD Symbol%3BAcc:3254]
rn6_v1_chr2_-_96520137_96520137	0.00394164	Nkx3-2	ENSRNOT00000066966|Zc2hc1a|ENSRNOG00000022356|zinc finger%2C C2HC-type containing 1A [Source:RGD Symbol%3BAcc:1311970]
rn6_v1_chr16_-_73670482_73670482	0.0038553	Nkx3-2	ENSRNOT00000024532|Nkx6-3|ENSRNOG00000018147|NK6 homeobox 3 [Source:RGD Symbol%3BAcc:1597780]
rn6_v1_chr3_-_161272460_161272460	0.00377766	Nkx3-2	ENSRNOT00000020740|Acot8|ENSRNOG00000015187|acyl-CoA thioesterase 8 [Source:RGD Symbol%3BAcc:70368]
rn6_v1_chr1_-_81295442_81295442	0.00362599	Nkx3-2	ENSRNOT00000030900|Irgc|ENSRNOG00000024257|immunity related GTPase cinema [Source:RGD Symbol%3BAcc:1311107]
rn6_v1_chr13_+_52645257_52645257	0.00327816	Nkx3-2	ENSRNOT00000012801|Lad1|ENSRNOG00000009144|ladinin 1 [Source:RGD Symbol%3BAcc:1310652]
rn6_v1_chr17_+_45175121_45175121	0.00321213	Nkx3-2	ENSRNOT00000080417|Nkapl|ENSRNOG00000056708|NFKB activating protein-like [Source:RGD Symbol%3BAcc:1311667]
rn6_v1_chr4_-_150434673_150434673	0.00277647	Nkx3-2	ENSRNOT00000076679|Bms1|ENSRNOG00000006576|BMS1 ribosome biogenesis factor [Source:RGD Symbol%3BAcc:1308043]
rn6_v1_chr3_+_114253637_114253637	0.00262809	Nkx3-2	ENSRNOT00000046843|Duox1|ENSRNOG00000033348|dual oxidase 1 [Source:RGD Symbol%3BAcc:628760]
rn6_v1_chr9_+_79944132_79944155	0.00244071	Nkx3-2	ENSRNOT00000071856|Smarcal1|ENSRNOG00000016503|Swi/SNF related matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1 [Source:RGD Symbol%3BAcc:1306134]	ENSRNOT00000022459|Smarcal1|ENSRNOG00000016503|Swi/SNF related matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1 [Source:RGD Symbol%3BAcc:1306134]
rn6_v1_chrX_-_66602458_66602506	0.00231505	Nkx3-2	ENSRNOT00000076510|Eda2r|ENSRNOG00000013018|ectodysplasin A2 receptor [Source:RGD Symbol%3BAcc:1564025]	ENSRNOT00000017429|Eda2r|ENSRNOG00000013018|ectodysplasin A2 receptor [Source:RGD Symbol%3BAcc:1564025]
rn6_v1_chr9_+_62291405_62291405	0.00165925	Nkx3-2	ENSRNOT00000051463|Plcl1|ENSRNOG00000032659|phospholipase C-like 1 [Source:RGD Symbol%3BAcc:708420]
rn6_v1_chr10_-_34333305_34333305	0.00150357	Nkx3-2	ENSRNOT00000071365|Olr1384|ENSRNOG00000047001|olfactory receptor gene Olr1384 [Source:RGD Symbol%3BAcc:1586044]
rn6_v1_chr1_-_102738148_102738148	0.00138847	Nkx3-2	ENSRNOT00000079553|LOC691143|ENSRNOG00000011895|similar to Serum amyloid A-3 protein precursor [Source:RGD Symbol%3BAcc:1587443]
rn6_v1_chr8_+_100260049_100260049	0.000914557	Nkx3-2	ENSRNOT00000011090|AABR07071101.1|ENSRNOG00000008363|
rn6_v1_chr13_-_90832138_90832138	0.000722211	Nkx3-2	ENSRNOT00000010930|Igsf9|ENSRNOG00000008054|immunoglobulin superfamily%2C member 9 [Source:RGD Symbol%3BAcc:1304566]
rn6_v1_chr2_+_58462949_58462949	0.000593133	Nkx3-2	ENSRNOT00000080618|Nadk2|ENSRNOG00000054157|NAD kinase 2%2C mitochondrial [Source:RGD Symbol%3BAcc:1306809]
rn6_v1_chr18_-_27424090_27424090	0.000540361	Nkx3-2	ENSRNOT00000087968|Brd8|ENSRNOG00000020340|bromodomain containing 8 [Source:RGD Symbol%3BAcc:1307003]
rn6_v1_chr15_+_42522108_42522108	0.000463243	Nkx3-2	ENSRNOT00000021621|Ccdc25|ENSRNOG00000015939|coiled-coil domain containing 25 [Source:RGD Symbol%3BAcc:1307689]
rn6_v1_chr8_+_129240528_129240528	0.000249422	Nkx3-2	ENSRNOT00000083427|Rpl14|ENSRNOG00000019007|ribosomal protein L14 [Source:RGD Symbol%3BAcc:621180]
