rn6_v1_chr8_+_48438259_48438259	0.891918	Pitx1	ENSRNOT00000059813|Mfrp|ENSRNOG00000039107|membrane frizzled-related protein [Source:RGD Symbol%3BAcc:1307477]
rn6_v1_chr8_+_48437918_48437918	0.669721	Pitx1	ENSRNOT00000085578|Mfrp|ENSRNOG00000039107|membrane frizzled-related protein [Source:RGD Symbol%3BAcc:1307477]
rn6_v1_chr2_-_48501436_48501436	0.483147	Pitx1	ENSRNOT00000017305|Isl1|ENSRNOG00000012556|ISL LIM homeobox 1 [Source:RGD Symbol%3BAcc:61957]
rn6_v1_chr1_-_166943592_166943592	0.448588	Pitx1	ENSRNOT00000026962|Folr1|ENSRNOG00000019902|folate receptor 1 [Source:RGD Symbol%3BAcc:71032]
rn6_v1_chr10_-_63176463_63176463	0.308803	Pitx1	ENSRNOT00000004717|Slc6a4|ENSRNOG00000003476|solute carrier family 6 member 4 [Source:RGD Symbol%3BAcc:3714]
rn6_v1_chr1_-_24191908_24191908	0.296744	Pitx1	ENSRNOT00000061157|Sgk1|ENSRNOG00000011815|serum/glucocorticoid regulated kinase 1 [Source:RGD Symbol%3BAcc:3668]
rn6_v1_chr8_-_108109801_108109801	0.271601	Pitx1	ENSRNOT00000034277|Sox14|ENSRNOG00000022084|SRY box 14 [Source:RGD Symbol%3BAcc:1309654]
rn6_v1_chr2_+_145174876_145174876	0.266078	Pitx1	ENSRNOT00000040631|Mab21l1|ENSRNOG00000032941|mab-21 like 1 [Source:RGD Symbol%3BAcc:1589984]
rn6_v1_chr9_-_121972055_121972055	0.238495	Pitx1	ENSRNOT00000089735|AABR07068851.1|ENSRNOG00000059237|clusterin-like protein 1  [Source:RefSeq peptide%3BAcc:NP_001028243]
rn6_v1_chr10_-_87407634_87407634	0.227362	Pitx1	ENSRNOT00000016657|Krt23|ENSRNOG00000011907|keratin 23 [Source:RGD Symbol%3BAcc:1308838]
rn6_v1_chr4_-_30276372_30276372	0.216155	Pitx1	ENSRNOT00000011823|Pon1|ENSRNOG00000008902|paraoxonase 1 [Source:RGD Symbol%3BAcc:620062]
rn6_v1_chr12_+_25264400_25264400	0.200938	Pitx1	ENSRNOT00000087656|Gtf2ird1|ENSRNOG00000001478|GTF2I repeat domain containing 1 [Source:RGD Symbol%3BAcc:620856]
rn6_v1_chr8_+_55050284_55050284	0.199606	Pitx1	ENSRNOT00000013242|Pih1d2|ENSRNOG00000009965|PIH1 domain containing 2 [Source:RGD Symbol%3BAcc:1310503]
rn6_v1_chr4_+_28972434_28972434	0.192811	Pitx1	ENSRNOT00000014219|Gngt1|ENSRNOG00000010546|G protein subunit gamma transducin 1 [Source:RGD Symbol%3BAcc:1595475]
rn6_v1_chr7_-_120490061_120490061	0.191833	Pitx1	ENSRNOT00000016247|Slc16a8|ENSRNOG00000012090|solute carrier family 16 member 8 [Source:RGD Symbol%3BAcc:69282]
rn6_v1_chr4_+_30313102_30313102	0.179618	Pitx1	ENSRNOT00000012657|Asb4|ENSRNOG00000009197|ankyrin repeat and SOCS box-containing 4 [Source:RGD Symbol%3BAcc:1563114]
rn6_v1_chr10_-_87195075_87195075	0.173003	Pitx1	ENSRNOT00000014851|Krt24|ENSRNOG00000010970|keratin 24 [Source:RGD Symbol%3BAcc:1303157]
rn6_v1_chr5_+_135997052_135997052	0.164668	Pitx1	ENSRNOT00000024921|Tctex1d4|ENSRNOG00000018463|Tctex1 domain containing 4 [Source:RGD Symbol%3BAcc:1565942]
rn6_v1_chr5_+_138300107_138300107	0.164197	Pitx1	ENSRNOT00000047151|Cldn19|ENSRNOG00000007922|claudin 19 [Source:RGD Symbol%3BAcc:1305000]
rn6_v1_chr15_+_44441856_44441856	0.162844	Pitx1	ENSRNOT00000018006|Gnrh1|ENSRNOG00000013441|gonadotropin releasing hormone 1 [Source:RGD Symbol%3BAcc:2720]
rn6_v1_chrX_+_105402867_105402867	0.151946	Pitx1	ENSRNOT00000057222|Rpl36a|ENSRNOG00000011494|ribosomal protein L36a [Source:RGD Symbol%3BAcc:1306640]
rn6_v1_chr8_+_94686938_94686938	0.151422	Pitx1	ENSRNOT00000013285|Ripply2|ENSRNOG00000010004|ripply transcriptional repressor 2 [Source:RGD Symbol%3BAcc:1308746]
rn6_v1_chr8_+_117953444_117953444	0.144983	Pitx1	ENSRNOT00000028141|Cdc25a|ENSRNOG00000020737|cell division cycle 25A [Source:RGD Symbol%3BAcc:621498]
rn6_v1_chr10_+_105630810_105630810	0.14494	Pitx1	ENSRNOT00000064904|Prcd|ENSRNOG00000043417|photoreceptor disc component [Source:MGI Symbol%3BAcc:MGI:3649529]
rn6_v1_chr3_+_112242270_112242326	0.144338	Pitx1	ENSRNOT00000080533|Capn3|ENSRNOG00000008609|calpain 3 [Source:RGD Symbol%3BAcc:2269]	ENSRNOT00000082876|Capn3|ENSRNOG00000008609|calpain 3 [Source:RGD Symbol%3BAcc:2269]
rn6_v1_chr5_+_29538380_29538380	0.141197	Pitx1	ENSRNOT00000010845|Calb1|ENSRNOG00000007456|calbindin 1 [Source:RGD Symbol%3BAcc:69340]
rn6_v1_chr10_-_48038647_48038647	0.13893	Pitx1	ENSRNOT00000078448|Prpsap2|ENSRNOG00000002724|phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:RGD Symbol%3BAcc:620207]
rn6_v1_chr5_-_135025084_135025084	0.130642	Pitx1	ENSRNOT00000018766|Tspan1|ENSRNOG00000023320|tetraspanin 1 [Source:RGD Symbol%3BAcc:1303308]
rn6_v1_chr3_+_91870208_91870208	0.129954	Pitx1	ENSRNOT00000040249|Rpl21|ENSRNOG00000049848|ribosomal protein L21 [Source:RGD Symbol%3BAcc:68390]
rn6_v1_chr18_-_59819113_59819113	0.127464	Pitx1	ENSRNOT00000065939|RGD1562699|ENSRNOG00000042716|RGD1562699 [Source:RGD Symbol%3BAcc:1562699]
rn6_v1_chr4_+_136512201_136512201	0.127211	Pitx1	ENSRNOT00000051645|Cntn6|ENSRNOG00000032517|contactin 6 [Source:RGD Symbol%3BAcc:62008]
rn6_v1_chr10_+_104368247_104368247	0.124343	Pitx1	ENSRNOT00000006519|Llgl2|ENSRNOG00000004834|LLGL2%2C scribble cell polarity complex component [Source:RGD Symbol%3BAcc:1560307]
rn6_v1_chr12_-_22126858_22126858	0.115528	Pitx1	ENSRNOT00000084480|Sap25|ENSRNOG00000051023|Sin3A-associated protein 25 [Source:RGD Symbol%3BAcc:1562406]
rn6_v1_chr5_+_21830882_21830882	0.11427	Pitx1	ENSRNOT00000008901|Chd7|ENSRNOG00000006689|chromodomain helicase DNA binding protein 7 [Source:RGD Symbol%3BAcc:1311921]
rn6_v1_chr19_-_46167950_46167950	0.114045	Pitx1	ENSRNOT00000071024|AABR07043892.1|ENSRNOG00000050326|
rn6_v1_chr12_+_25264192_25264192	0.109944	Pitx1	ENSRNOT00000079392|Gtf2ird1|ENSRNOG00000001478|GTF2I repeat domain containing 1 [Source:RGD Symbol%3BAcc:620856]
rn6_v1_chr2_+_225645568_225645568	0.10924	Pitx1	ENSRNOT00000017878|Abca4|ENSRNOG00000012892|ATP binding cassette subfamily A member 4 [Source:RGD Symbol%3BAcc:1309445]
rn6_v1_chr11_-_43099412_43099412	0.102847	Pitx1	ENSRNOT00000002281|Gabrr3|ENSRNOG00000001679|gamma-aminobutyric acid type A receptor rho3 subunit [Source:RGD Symbol%3BAcc:621564]
rn6_v1_chr10_+_69737328_69737422	0.102592	Pitx1	ENSRNOT00000055999|Tmem132e|ENSRNOG00000007455|transmembrane protein 132E [Source:RGD Symbol%3BAcc:1565522]	ENSRNOT00000076773|Tmem132e|ENSRNOG00000007455|transmembrane protein 132E [Source:RGD Symbol%3BAcc:1565522]
rn6_v1_chr8_-_117353672_117353672	0.100979	Pitx1	ENSRNOT00000027262|Ndufaf3|ENSRNOG00000020068|NADH:ubiquinone oxidoreductase complex assembly factor 3 [Source:RGD Symbol%3BAcc:708545]
rn6_v1_chr4_+_94696965_94696965	0.100126	Pitx1	ENSRNOT00000064696|Grid2|ENSRNOG00000006174|glutamate ionotropic receptor delta type subunit 2 [Source:RGD Symbol%3BAcc:68368]
rn6_v1_chr1_+_89008117_89008117	0.0996994	Pitx1	ENSRNOT00000028401|Hspb6|ENSRNOG00000020922|heat shock protein family B (small) member 6 [Source:RGD Symbol%3BAcc:621554]
rn6_v1_chr3_-_44086006_44086022	0.0989407	Pitx1	ENSRNOT00000034449|Ermn|ENSRNOG00000021472|ermin [Source:RGD Symbol%3BAcc:1308367]	ENSRNOT00000082604|Ermn|ENSRNOG00000021472|ermin [Source:RGD Symbol%3BAcc:1308367]
rn6_v1_chr7_+_60015998_60015998	0.0962155	Pitx1	ENSRNOT00000007309|Best3|ENSRNOG00000005491|bestrophin 3 [Source:RGD Symbol%3BAcc:1305439]
rn6_v1_chr4_+_151298548_151298548	0.093966	Pitx1	ENSRNOT00000010746|Cacna2d4|ENSRNOG00000008031|calcium voltage-gated channel auxiliary subunit alpha2delta 4 [Source:RGD Symbol%3BAcc:1562038]
rn6_v1_chr4_-_51199570_51199570	0.0930603	Pitx1	ENSRNOT00000010788|Slc13a1|ENSRNOG00000008121|solute carrier family 13 member 1 [Source:RGD Symbol%3BAcc:61919]
rn6_v1_chr13_+_85818427_85818473	0.092471	Pitx1	ENSRNOT00000077227|Rxrg|ENSRNOG00000004537|retinoid X receptor gamma [Source:RGD Symbol%3BAcc:620046]	ENSRNOT00000006117|Rxrg|ENSRNOG00000004537|retinoid X receptor gamma [Source:RGD Symbol%3BAcc:620046]
rn6_v1_chr3_-_113423149_113423149	0.0846969	Pitx1	ENSRNOT00000021008|Serinc4|ENSRNOG00000015499|serine incorporator 4 [Source:RGD Symbol%3BAcc:1566077]
rn6_v1_chr7_+_143874734_143874734	0.0846838	Pitx1	ENSRNOT00000093277|Gm9918|ENSRNOG00000062295|predicted gene 9918 [Source:MGI Symbol%3BAcc:MGI:3646315]
rn6_v1_chr2_+_95008311_95008311	0.0846178	Pitx1	ENSRNOT00000077270|Tpd52|ENSRNOG00000011441|tumor protein D52 [Source:RGD Symbol%3BAcc:1306767]
rn6_v1_chr9_+_81816872_81816872	0.0840645	Pitx1	ENSRNOT00000041407|Plcd4|ENSRNOG00000016361|phospholipase C%2C delta 4 [Source:RGD Symbol%3BAcc:621025]
rn6_v1_chr5_-_115387377_115387413	0.0830153	Pitx1	ENSRNOT00000036030|RGD1560146|ENSRNOG00000026169|similar to hypothetical protein MGC34837 [Source:RGD Symbol%3BAcc:1560146]	ENSRNOT00000077492|RGD1560146|ENSRNOG00000026169|similar to hypothetical protein MGC34837 [Source:RGD Symbol%3BAcc:1560146]
rn6_v1_chr16_+_23317953_23317953	0.0795787	Pitx1	ENSRNOT00000075287|AABR07024972.1|ENSRNOG00000049177|
rn6_v1_chr5_+_133864798_133864798	0.0794843	Pitx1	ENSRNOT00000091977|Tal1|ENSRNOG00000025051|TAL bHLH transcription factor 1%2C erythroid differentiation factor [Source:RGD Symbol%3BAcc:1306748]
rn6_v1_chr7_+_94795214_94795214	0.0789632	Pitx1	ENSRNOT00000005722|Deptor|ENSRNOG00000004328|DEP domain containing MTOR-interacting protein [Source:RGD Symbol%3BAcc:1561030]
rn6_v1_chr18_+_36713869_36713869	0.0768177	Pitx1	ENSRNOT00000025465|Pou4f3|ENSRNOG00000018842|POU class 4 homeobox 3 [Source:RGD Symbol%3BAcc:1310459]
rn6_v1_chr8_-_68525911_68525924	0.0754622	Pitx1	ENSRNOT00000080588|Iqch|ENSRNOG00000008353|IQ motif containing H [Source:RGD Symbol%3BAcc:1310670]	ENSRNOT00000011109|Iqch|ENSRNOG00000008353|IQ motif containing H [Source:RGD Symbol%3BAcc:1310670]
rn6_v1_chr2_+_241909832_241909832	0.0749975	Pitx1	ENSRNOT00000047975|Ppp3ca|ENSRNOG00000009882|protein phosphatase 3 catalytic subunit alpha [Source:RGD Symbol%3BAcc:3382]
rn6_v1_chr3_+_113318563_113318563	0.0734039	Pitx1	ENSRNOT00000089230|Ckmt1|ENSRNOG00000014573|creatine kinase%2C mitochondrial 1 [Source:RGD Symbol%3BAcc:61976]
rn6_v1_chr5_+_128190708_128190708	0.0725426	Pitx1	ENSRNOT00000012492|Orc1|ENSRNOG00000008841|origin recognition complex%2C subunit 1 [Source:RGD Symbol%3BAcc:631435]
rn6_v1_chr10_-_56000225_56000225	0.0713004	Pitx1	ENSRNOT00000013439|Tmem88|ENSRNOG00000009870|transmembrane protein 88 [Source:RGD Symbol%3BAcc:1561781]
rn6_v1_chr5_+_98387291_98387291	0.0691161	Pitx1	ENSRNOT00000046503|Tyrp1|ENSRNOG00000029318|tyrosinase-related protein 1 [Source:RGD Symbol%3BAcc:1593266]
rn6_v1_chr18_-_24929091_24929091	0.0683054	Pitx1	ENSRNOT00000019596|Proc|ENSRNOG00000014376|protein C [Source:RGD Symbol%3BAcc:3411]
rn6_v1_chr1_+_107344904_107344904	0.067561	Pitx1	ENSRNOT00000082582|Gas2|ENSRNOG00000016717|growth arrest-specific 2 [Source:RGD Symbol%3BAcc:1563167]
rn6_v1_chr20_-_5806097_5806097	0.067322	Pitx1	ENSRNOT00000000611|Clps|ENSRNOG00000000510|colipase [Source:RGD Symbol%3BAcc:2363]
rn6_v1_chr7_-_49741540_49741540	0.0659826	Pitx1	ENSRNOT00000006523|Myf6|ENSRNOG00000004878|myogenic factor 6 [Source:RGD Symbol%3BAcc:3134]
rn6_v1_chr20_-_7943575_7943575	0.0657121	Pitx1	ENSRNOT00000066897|Tulp1|ENSRNOG00000000507|tubby like protein 1 [Source:RGD Symbol%3BAcc:1311062]
rn6_v1_chr4_+_147832136_147832136	0.0651955	Pitx1	ENSRNOT00000064603|Rho|ENSRNOG00000011144|rhodopsin [Source:RGD Symbol%3BAcc:3573]
rn6_v1_chr7_-_44771458_44771458	0.0635918	Pitx1	ENSRNOT00000006007|Alx1|ENSRNOG00000004390|ALX homeobox 1 [Source:RGD Symbol%3BAcc:2273]
rn6_v1_chr2_+_60966789_60966789	0.0633215	Pitx1	ENSRNOT00000025490|Slc45a2|ENSRNOG00000018759|solute carrier family 45%2C member 2 [Source:RGD Symbol%3BAcc:1306690]
rn6_v1_chr4_+_117962319_117962319	0.0630077	Pitx1	ENSRNOT00000057441|Tgfa|ENSRNOG00000016182|transforming growth factor alpha [Source:RGD Symbol%3BAcc:3849]
rn6_v1_chr14_+_23480462_23480462	0.0609533	Pitx1	ENSRNOT00000002755|Gnrhr|ENSRNOG00000002011|gonadotropin releasing hormone receptor [Source:RGD Symbol%3BAcc:70513]
rn6_v1_chr3_-_91195981_91195981	0.0606786	Pitx1	ENSRNOT00000056935|RGD1309730|ENSRNOG00000037567|similar to RIKEN cDNA B230118H07 [Source:RGD Symbol%3BAcc:1309730]
rn6_v1_chr2_+_45104305_45104305	0.060675	Pitx1	ENSRNOT00000014559|Esm1|ENSRNOG00000010797|endothelial cell-specific molecule 1 [Source:RGD Symbol%3BAcc:71013]
rn6_v1_chr2_-_259382765_259382765	0.0605135	Pitx1	ENSRNOT00000091407|St6galnac3|ENSRNOG00000056894|ST6 N-acetylgalactosaminide alpha-2%2C6-sialyltransferase 3 [Source:RGD Symbol%3BAcc:3677]
rn6_v1_chr2_+_24449485_24449485	0.0602241	Pitx1	ENSRNOT00000073688|Tbca|ENSRNOG00000048342|tubulin folding cofactor A [Source:RGD Symbol%3BAcc:1311538]
rn6_v1_chr3_-_104018861_104018861	0.0592962	Pitx1	ENSRNOT00000008387|Chrm5|ENSRNOG00000006397|cholinergic receptor%2C muscarinic 5 [Source:RGD Symbol%3BAcc:620027]
rn6_v1_chr11_+_87220618_87220618	0.0573893	Pitx1	ENSRNOT00000041975|Gsc2|ENSRNOG00000000282|goosecoid homeobox 2 [Source:RGD Symbol%3BAcc:1305333]
rn6_v1_chr7_-_117732339_117732387	0.0572531	Pitx1	ENSRNOT00000092917|Foxh1|ENSRNOG00000015371|forkhead box H1 [Source:RGD Symbol%3BAcc:1311275]	ENSRNOT00000020696|Foxh1|ENSRNOG00000015371|forkhead box H1 [Source:RGD Symbol%3BAcc:1311275]
rn6_v1_chr8_-_107490093_107490093	0.0571993	Pitx1	ENSRNOT00000046832|LOC684466|ENSRNOG00000048802|similar to Fas apoptotic inhibitory molecule 1 (rFAIM) [Source:RGD Symbol%3BAcc:1590301]
rn6_v1_chr9_-_93125014_93125014	0.0567033	Pitx1	ENSRNOT00000023829|Htr2b|ENSRNOG00000017625|5-hydroxytryptamine receptor 2B [Source:RGD Symbol%3BAcc:61801]
rn6_v1_chr15_+_3938075_3938075	0.0565155	Pitx1	ENSRNOT00000065644|Camk2g|ENSRNOG00000009783|calcium/calmodulin-dependent protein kinase II gamma [Source:RGD Symbol%3BAcc:621802]
rn6_v1_chr19_-_38120578_38120578	0.0558952	Pitx1	ENSRNOT00000026873|Esrp2|ENSRNOG00000023177|epithelial splicing regulatory protein 2 [Source:RGD Symbol%3BAcc:1310855]
rn6_v1_chrX_+_70461718_70461776	0.0552498	Pitx1	ENSRNOT00000078233|Kif4a|ENSRNOG00000038035|kinesin family member 4A [Source:RGD Symbol%3BAcc:620526]	ENSRNOT00000003789|Kif4a|ENSRNOG00000038035|kinesin family member 4A [Source:RGD Symbol%3BAcc:620526]
rn6_v1_chr1_+_137799185_137799185	0.0543214	Pitx1	ENSRNOT00000083590|Agbl1|ENSRNOG00000022610|ATP/GTP binding protein-like 1 [Source:RGD Symbol%3BAcc:1560280]	ENSRNOT00000092778|Agbl1|ENSRNOG00000022610|ATP/GTP binding protein-like 1 [Source:RGD Symbol%3BAcc:1560280]
rn6_v1_chr16_+_10277775_10277775	0.0526489	Pitx1	ENSRNOT00000090679|Rbp3|ENSRNOG00000051911|retinol binding protein 3 [Source:RGD Symbol%3BAcc:3545]
rn6_v1_chr3_-_50120392_50120392	0.0518459	Pitx1	ENSRNOT00000006175|Fign|ENSRNOG00000004679|fidgetin%2C microtubule severing factor [Source:RGD Symbol%3BAcc:1308174]
rn6_v1_chr4_-_56656980_56656980	0.0501809	Pitx1	ENSRNOT00000009278|Opn1sw|ENSRNOG00000006874|opsin 1 (cone pigments)%2C short-wave-sensitive [Source:RGD Symbol%3BAcc:621033]
rn6_v1_chr4_+_14001761_14001761	0.0494056	Pitx1	ENSRNOT00000076519|Cd36|ENSRNOG00000040108|CD36 molecule [Source:RGD Symbol%3BAcc:2301]
rn6_v1_chrY_-_1305026_1305026	0.0490266	Pitx1	ENSRNOT00000092901|Usp9y|ENSRNOG00000058664|ubiquitin specific peptidase 9%2C Y-linked [Source:RGD Symbol%3BAcc:9087771]
rn6_v1_chr2_-_206222248_206222248	0.0474967	Pitx1	ENSRNOT00000026075|Olfml3|ENSRNOG00000019211|olfactomedin-like 3 [Source:RGD Symbol%3BAcc:1311106]
rn6_v1_chr9_+_47185443_47185443	0.0474502	Pitx1	ENSRNOT00000020194|Il18r1|ENSRNOG00000015027|interleukin 18 receptor 1 [Source:RGD Symbol%3BAcc:1308589]
rn6_v1_chr3_+_80075991_80075991	0.0472925	Pitx1	ENSRNOT00000080266|Pacsin3|ENSRNOG00000014204|protein kinase C and casein kinase substrate in neurons 3 [Source:RGD Symbol%3BAcc:1307327]
rn6_v1_chr4_-_170740274_170740274	0.0462847	Pitx1	ENSRNOT00000012212|Gucy2c|ENSRNOG00000009031|guanylate cyclase 2C [Source:RGD Symbol%3BAcc:2771]
rn6_v1_chr5_+_15043955_15043955	0.0462324	Pitx1	ENSRNOT00000047093|Rp1|ENSRNOG00000008807|retinitis pigmentosa 1 [Source:RGD Symbol%3BAcc:1596713]
rn6_v1_chr8_-_68275720_68275720	0.0437053	Pitx1	ENSRNOT00000079122|Map2k5|ENSRNOG00000007926|mitogen activated protein kinase kinase 5 [Source:RGD Symbol%3BAcc:61890]
rn6_v1_chr10_+_34578356_34578356	0.0431956	Pitx1	ENSRNOT00000047454|Olr1389|ENSRNOG00000050601|olfactory receptor 1389 [Source:RGD Symbol%3BAcc:1332792]
rn6_v1_chr10_-_85289777_85289777	0.0429982	Pitx1	ENSRNOT00000055427|Gpr179|ENSRNOG00000029245|G protein-coupled receptor 179 [Source:RGD Symbol%3BAcc:1560033]	ENSRNOT00000014863|Gpr179|ENSRNOG00000029245|G protein-coupled receptor 179 [Source:RGD Symbol%3BAcc:1560033]
rn6_v1_chr2_+_3662763_3662763	0.0416229	Pitx1	ENSRNOT00000017828|Mctp1|ENSRNOG00000013282|multiple C2 and transmembrane domain containing 1 [Source:RGD Symbol%3BAcc:1305199]
rn6_v1_chrM_+_8599_8599	0.0404998	Pitx1	ENSRNOT00000049683|Mt-cox3|ENSRNOG00000030700|mitochondrially encoded cytochrome C oxidase III [Source:RGD Symbol%3BAcc:621873]
rn6_v1_chr3_+_117421604_117421673	0.0401196	Pitx1	ENSRNOT00000008860|Slc12a1|ENSRNOG00000005367|solute carrier family 12 member 1 [Source:RGD Symbol%3BAcc:3685]	ENSRNOT00000008857|Slc12a1|ENSRNOG00000005367|solute carrier family 12 member 1 [Source:RGD Symbol%3BAcc:3685]
rn6_v1_chr2_-_203680083_203680083	0.0400071	Pitx1	ENSRNOT00000021268|Cd2|ENSRNOG00000015821|Cd2 molecule [Source:RGD Symbol%3BAcc:2297]
rn6_v1_chr16_+_49185560_49185560	0.0398199	Pitx1	ENSRNOT00000014360|Helt|ENSRNOG00000010785|helt bHLH transcription factor [Source:RGD Symbol%3BAcc:1564073]
rn6_v1_chr8_+_33514042_33514042	0.0396319	Pitx1	ENSRNOT00000081614|Kcnj1|ENSRNOG00000059005|potassium voltage-gated channel subfamily J member 1 [Source:RGD Symbol%3BAcc:2957]	ENSRNOT00000081525|Kcnj1|ENSRNOG00000059005|potassium voltage-gated channel subfamily J member 1 [Source:RGD Symbol%3BAcc:2957]
rn6_v1_chr20_+_28989491_28989491	0.0380435	Pitx1	ENSRNOT00000074524|Pla2g12b|ENSRNOG00000046619|phospholipase A2%2C group XIIB [Source:RGD Symbol%3BAcc:1588484]
rn6_v1_chr5_+_48303366_48303366	0.037647	Pitx1	ENSRNOT00000009973|Gabrr2|ENSRNOG00000007490|gamma-aminobutyric acid type A receptor rho 2 subunit [Source:RGD Symbol%3BAcc:61902]
rn6_v1_chr11_+_43521054_43521054	0.036662	Pitx1	ENSRNOT00000041679|Olr1551|ENSRNOG00000046134|olfactory receptor 1551 [Source:RGD Symbol%3BAcc:1333073]
rn6_v1_chr8_+_42511520_42511520	0.036175	Pitx1	ENSRNOT00000042974|Olr1259|ENSRNOG00000032383|olfactory receptor 1259 [Source:RGD Symbol%3BAcc:1334332]
rn6_v1_chrX_-_15741103_15741103	0.0357829	Pitx1	ENSRNOT00000066489|Cacna1f|ENSRNOG00000010348|calcium voltage-gated channel subunit alpha1 F [Source:RGD Symbol%3BAcc:621535]
rn6_v1_chr6_+_56625650_56625650	0.0355941	Pitx1	ENSRNOT00000008803|Meox2|ENSRNOG00000006588|mesenchyme homeobox 2 [Source:RGD Symbol%3BAcc:3079]
rn6_v1_chr2_+_54191538_54191538	0.0352849	Pitx1	ENSRNOT00000019524|Plcxd3|ENSRNOG00000014550|phosphatidylinositol-specific phospholipase C%2C X domain containing 3 [Source:RGD Symbol%3BAcc:1308448]
rn6_v1_chr19_+_10142496_10142496	0.0352452	Pitx1	ENSRNOT00000088645|Cngb1|ENSRNOG00000031773|cyclic nucleotide gated channel beta 1 [Source:RGD Symbol%3BAcc:621809]	ENSRNOT00000060351|Cngb1|ENSRNOG00000031773|cyclic nucleotide gated channel beta 1 [Source:RGD Symbol%3BAcc:621809]
rn6_v1_chr3_+_138715570_138715570	0.0349983	Pitx1	ENSRNOT00000064723|Sec23b|ENSRNOG00000008411|Sec23 homolog B%2C coat complex II component [Source:RGD Symbol%3BAcc:1310699]
rn6_v1_chr4_+_8066737_8066737	0.0349	Pitx1	ENSRNOT00000063994|Srpk2|ENSRNOG00000010601|SRSF protein kinase 2 [Source:RGD Symbol%3BAcc:1305107]
rn6_v1_chr12_+_13097269_13097269	0.0347063	Pitx1	ENSRNOT00000087094|Rac1|ENSRNOG00000001068|ras-related C3 botulinum toxin substrate 1 [Source:RGD Symbol%3BAcc:619755]
rn6_v1_chr1_+_277261681_277261681	0.0339277	Pitx1	ENSRNOT00000022724|Plekhs1|ENSRNOG00000016926|pleckstrin homology domain containing S1 [Source:RGD Symbol%3BAcc:1559884]
rn6_v1_chr12_-_39697465_39697465	0.0335591	Pitx1	ENSRNOT00000078683|Vps29|ENSRNOG00000001274|VPS29 retromer complex component [Source:RGD Symbol%3BAcc:1308332]
rn6_v1_chr19_-_43215281_43215281	0.0328963	Pitx1	ENSRNOT00000025052|Aars|ENSRNOG00000018404|alanyl-tRNA synthetase [Source:RGD Symbol%3BAcc:1304832]
rn6_v1_chr18_+_56544652_56544652	0.0314822	Pitx1	ENSRNOT00000024171|Pde6a|ENSRNOG00000017816|phosphodiesterase 6A [Source:RGD Symbol%3BAcc:1306835]
rn6_v1_chrX_-_25628272_25628272	0.0311469	Pitx1	ENSRNOT00000086414|Mid1|ENSRNOG00000003613|midline 1 [Source:RGD Symbol%3BAcc:2640]
rn6_v1_chr1_-_134871167_134871167	0.0311412	Pitx1	ENSRNOT00000076300|Chd2|ENSRNOG00000012716|chromodomain helicase DNA binding protein 2 [Source:RGD Symbol%3BAcc:1310056]
rn6_v1_chr16_+_14306804_14306804	0.0310984	Pitx1	ENSRNOT00000017773|Lrit1|ENSRNOG00000012790|leucine-rich repeat%2C Ig-like and transmembrane domains 1 [Source:RGD Symbol%3BAcc:628607]
rn6_v1_chr5_+_104362971_104362971	0.0309461	Pitx1	ENSRNOT00000058520|Adamtsl1|ENSRNOG00000006956|ADAMTS-like 1 [Source:RGD Symbol%3BAcc:1306439]
rn6_v1_chr2_+_46066780_46066780	0.0307894	Pitx1	ENSRNOT00000073226|LOC108350225|ENSRNOG00000048474|olfactory receptor 8B8-like [Source:RGD Symbol%3BAcc:11457032]
rn6_v1_chr10_-_55851235_55851235	0.0293186	Pitx1	ENSRNOT00000010790|Gucy2d|ENSRNOG00000007931|guanylate cyclase 2D%2C retinal [Source:RGD Symbol%3BAcc:620438]
rn6_v1_chrX_+_159158194_159158195	0.0287165	Pitx1	ENSRNOT00000043820|Fhl1|ENSRNOG00000000875|four and a half LIM domains 1 [Source:RGD Symbol%3BAcc:2615]	ENSRNOT00000001169|Fhl1|ENSRNOG00000000875|four and a half LIM domains 1 [Source:RGD Symbol%3BAcc:2615]	ENSRNOT00000083502|Fhl1|ENSRNOG00000000875|four and a half LIM domains 1 [Source:RGD Symbol%3BAcc:2615]
rn6_v1_chr8_-_55171718_55171718	0.0284144	Pitx1	ENSRNOT00000080736|LOC689959|ENSRNOG00000051792|hypothetical protein LOC689959 [Source:RGD Symbol%3BAcc:1586341]
rn6_v1_chr16_+_39353283_39353283	0.0283751	Pitx1	ENSRNOT00000080125|LOC108348202|ENSRNOG00000057340|disintegrin and metalloproteinase domain-containing protein 21-like [Source:RGD Symbol%3BAcc:11439298]
rn6_v1_chr1_-_8885967_8885967	0.0283074	Pitx1	ENSRNOT00000016102|Gje1|ENSRNOG00000012092|gap junction protein%2C epsilon 1 [Source:RGD Symbol%3BAcc:1598009]
rn6_v1_chr18_-_74542077_74542077	0.0278459	Pitx1	ENSRNOT00000078519|Slc14a2|ENSRNOG00000056021|solute carrier family 14 member 2 [Source:RGD Symbol%3BAcc:3689]
rn6_v1_chr15_-_34647421_34647421	0.0275189	Pitx1	ENSRNOT00000072426|Mcpt8|ENSRNOG00000049991|mast cell protease 8 [Source:RGD Symbol%3BAcc:3067]
rn6_v1_chr20_+_20378861_20378861	0.0268667	Pitx1	ENSRNOT00000091044|Ank3|ENSRNOG00000053288|ankyrin 3 [Source:RGD Symbol%3BAcc:620157]
rn6_v1_chr10_-_88036040_88036040	0.026779	Pitx1	ENSRNOT00000018851|Krt13|ENSRNOG00000014070|keratin 13 [Source:RGD Symbol%3BAcc:1302937]
rn6_v1_chr1_+_124983452_124983452	0.026487	Pitx1	ENSRNOT00000021262|Trpm1|ENSRNOG00000015829|transient receptor potential cation channel%2C subfamily M%2C member 1 [Source:RGD Symbol%3BAcc:1597140]
rn6_v1_chr18_-_37096132_37096132	0.0219959	Pitx1	ENSRNOT00000041188|Ppp2r2b|ENSRNOG00000018851|protein phosphatase 2%2C regulatory subunit B%2C beta [Source:RGD Symbol%3BAcc:631441]
rn6_v1_chrX_-_156589907_156589907	0.0216204	Pitx1	ENSRNOT00000083147|Opn1mw|ENSRNOG00000051529|opsin 1 (cone pigments)%2C medium-wave-sensitive [Source:RGD Symbol%3BAcc:620978]
rn6_v1_chrX_-_10218583_10218583	0.0197768	Pitx1	ENSRNOT00000013382|Nyx|ENSRNOG00000009646|nyctalopin [Source:RGD Symbol%3BAcc:1561300]
rn6_v1_chr4_+_8066907_8066907	0.0196041	Pitx1	ENSRNOT00000080811|Srpk2|ENSRNOG00000010601|SRSF protein kinase 2 [Source:RGD Symbol%3BAcc:1305107]
rn6_v1_chr14_+_19319299_19319299	0.0177685	Pitx1	ENSRNOT00000086542|Ankrd17|ENSRNOG00000002940|ankyrin repeat domain 17 [Source:RGD Symbol%3BAcc:1562348]
rn6_v1_chr2_-_250805445_250805445	0.0170771	Pitx1	ENSRNOT00000055362|Clca4l|ENSRNOG00000036877|chloride channel calcium activated 4-like [Source:RGD Symbol%3BAcc:1591945]
rn6_v1_chr3_+_113423693_113423693	0.0169736	Pitx1	ENSRNOT00000021091|Hypk|ENSRNOG00000015703|Huntingtin interacting protein K [Source:RGD Symbol%3BAcc:1311457]
rn6_v1_chr2_+_128461224_128461224	0.0166179	Pitx1	ENSRNOT00000018872|Jade1|ENSRNOG00000014066|jade family PHD finger 1 [Source:RGD Symbol%3BAcc:1306920]
rn6_v1_chr16_+_2670618_2670618	0.0162829	Pitx1	ENSRNOT00000030102|Il17rd|ENSRNOG00000021966|interleukin 17 receptor D [Source:RGD Symbol%3BAcc:1565237]
rn6_v1_chr8_-_114617466_114617466	0.0145791	Pitx1	ENSRNOT00000082992|Col6a5|ENSRNOG00000010663|collagen type VI alpha 5 chain [Source:RGD Symbol%3BAcc:1565804]	ENSRNOT00000038160|Col6a5|ENSRNOG00000010663|collagen type VI alpha 5 chain [Source:RGD Symbol%3BAcc:1565804]
rn6_v1_chr19_-_43215077_43215077	0.0126265	Pitx1	ENSRNOT00000082151|Aars|ENSRNOG00000018404|alanyl-tRNA synthetase [Source:RGD Symbol%3BAcc:1304832]
rn6_v1_chr18_+_71395830_71395830	0.0124426	Pitx1	ENSRNOT00000024831|Smad7|ENSRNOG00000018359|SMAD family member 7 [Source:RGD Symbol%3BAcc:69314]
rn6_v1_chr20_-_5123073_5123073	0.0120343	Pitx1	ENSRNOT00000001126|Apom|ENSRNOG00000000850|apolipoprotein M [Source:RGD Symbol%3BAcc:620773]
rn6_v1_chr10_-_55560422_55560422	0.0117124	Pitx1	ENSRNOT00000006883|Rangrf|ENSRNOG00000004980|RAN guanine nucleotide release factor [Source:RGD Symbol%3BAcc:1563195]
rn6_v1_chr3_-_147849875_147849875	0.0114219	Pitx1	ENSRNOT00000081153|Nrsn2|ENSRNOG00000023935|neurensin 2 [Source:RGD Symbol%3BAcc:1586322]
rn6_v1_chr7_-_70476340_70476340	0.0110154	Pitx1	ENSRNOT00000006800|Arhgef25|ENSRNOG00000005034|Rho guanine nucleotide exchange factor 25 [Source:RGD Symbol%3BAcc:735210]
rn6_v1_chr10_+_53818818_53818818	0.00783971	Pitx1	ENSRNOT00000057260|Myh8|ENSRNOG00000050042|myosin heavy chain 8 [Source:RGD Symbol%3BAcc:620356]
rn6_v1_chr18_-_11858744_11858754	0.00696468	Pitx1	ENSRNOT00000061417|Dsc2|ENSRNOG00000039969|desmocollin 2 [Source:RGD Symbol%3BAcc:1309426]	ENSRNOT00000082891|Dsc2|ENSRNOG00000039969|desmocollin 2 [Source:RGD Symbol%3BAcc:1309426]
rn6_v1_chr3_+_56355431_56355431	0.0069492	Pitx1	ENSRNOT00000037188|Myo3b|ENSRNOG00000030022|myosin IIIB [Source:RGD Symbol%3BAcc:1560313]
rn6_v1_chr2_-_45480798_45480798	0.00553277	Pitx1	ENSRNOT00000066764|Snx18|ENSRNOG00000010971|sorting nexin 18 [Source:RGD Symbol%3BAcc:1310367]
rn6_v1_chr14_+_108007724_108007724	0.00426608	Pitx1	ENSRNOT00000014062|Xpo1|ENSRNOG00000009935|exportin 1 [Source:RGD Symbol%3BAcc:620517]
rn6_v1_chr14_-_113644779_113644779	0.00230352	Pitx1	ENSRNOT00000005306|Cfap36|ENSRNOG00000003901|cilia and flagella associated protein 36 [Source:RGD Symbol%3BAcc:1311732]
rn6_v1_chr4_+_155531906_155531906	0.00102749	Pitx1	ENSRNOT00000060937|Nanog|ENSRNOG00000008368|Nanog homeobox [Source:RGD Symbol%3BAcc:1303178]
rn6_v1_chr6_+_23337571_23337571	0.00085117	Pitx1	ENSRNOT00000011832|RGD1304963|ENSRNOG00000008942|similar to hypothetical protein MGC38716 [Source:RGD Symbol%3BAcc:1304963]
rn6_v1_chr20_-_3401273_3401315	0.00083528	Pitx1	ENSRNOT00000089257|Nrm|ENSRNOG00000000818|nurim (nuclear envelope membrane protein) [Source:RGD Symbol%3BAcc:1302966]	ENSRNOT00000078451|Nrm|ENSRNOG00000000818|nurim (nuclear envelope membrane protein) [Source:RGD Symbol%3BAcc:1302966]	ENSRNOT00000001085|Nrm|ENSRNOG00000000818|nurim (nuclear envelope membrane protein) [Source:RGD Symbol%3BAcc:1302966]
