rn6_v1_chr4_+_168752133_168752133	0.117515	Rara	ENSRNOT00000010289|Apold1|ENSRNOG00000007830|apolipoprotein L domain containing 1 [Source:RGD Symbol%3BAcc:1303123]
rn6_v1_chr10_-_82229140_82229140	0.090672	Rara	ENSRNOT00000004400|Epn3|ENSRNOG00000003284|epsin 3 [Source:RGD Symbol%3BAcc:1306416]
rn6_v1_chr16_-_20890949_20890949	0.0905072	Rara	ENSRNOT00000081977|Homer3|ENSRNOG00000020229|homer scaffolding protein 3 [Source:RGD Symbol%3BAcc:620706]
rn6_v1_chr1_+_199449973_199449973	0.0870625	Rara	ENSRNOT00000029994|Trim72|ENSRNOG00000022099|tripartite motif containing 72 [Source:RGD Symbol%3BAcc:1562778]
rn6_v1_chr5_-_152473868_152473868	0.062889	Rara	ENSRNOT00000022130|Fam110d|ENSRNOG00000016491|family with sequence similarity 110%2C member D [Source:RGD Symbol%3BAcc:1564994]
rn6_v1_chr1_+_88182585_88182585	0.0524645	Rara	ENSRNOT00000044145|Yif1b|ENSRNOG00000055286|Yip1 interacting factor homolog B%2C membrane trafficking protein [Source:RGD Symbol%3BAcc:735199]
rn6_v1_chr1_+_88182155_88182155	0.0429267	Rara	ENSRNOT00000083176|Yif1b|ENSRNOG00000055286|Yip1 interacting factor homolog B%2C membrane trafficking protein [Source:RGD Symbol%3BAcc:735199]
rn6_v1_chr7_-_143793774_143793774	0.0415753	Rara	ENSRNOT00000079678|Csad|ENSRNOG00000011573|cysteine sulfinic acid decarboxylase [Source:RGD Symbol%3BAcc:621030]
rn6_v1_chr3_+_149624712_149624712	0.0355691	Rara	ENSRNOT00000018581|Bpifa1|ENSRNOG00000013859|BPI fold containing family A%2C member 1 [Source:RGD Symbol%3BAcc:619818]
rn6_v1_chr1_+_87180624_87180662	0.0329472	Rara	ENSRNOT00000056933|LOC103689986|ENSRNOG00000020616|protein YIF1B [Source:RGD Symbol%3BAcc:9097256]	ENSRNOT00000027987|LOC103689986|ENSRNOG00000020616|protein YIF1B [Source:RGD Symbol%3BAcc:9097256]
rn6_v1_chr7_-_73270308_73270308	0.0297905	Rara	ENSRNOT00000007430|Rida|ENSRNOG00000005437|reactive intermediate imine deaminase A homolog [Source:RGD Symbol%3BAcc:70940]
rn6_v1_chr4_-_145390447_145390497	0.0278144	Rara	ENSRNOT00000091965|Cidec|ENSRNOG00000009153|cell death-inducing DFFA-like effector c [Source:RGD Symbol%3BAcc:1562113]	ENSRNOT00000012136|Cidec|ENSRNOG00000009153|cell death-inducing DFFA-like effector c [Source:RGD Symbol%3BAcc:1562113]
rn6_v1_chr15_-_56970365_56970365	0.0269564	Rara	ENSRNOT00000047192|Lrch1|ENSRNOG00000009412|leucine rich repeats and calponin homology domain containing 1 [Source:RGD Symbol%3BAcc:1595678]
rn6_v1_chr20_-_31956649_31956649	0.0245493	Rara	ENSRNOT00000072429|Hk1|ENSRNOG00000046891|hexokinase 1 [Source:RGD Symbol%3BAcc:2796]
rn6_v1_chr8_+_50559126_50559126	0.0239997	Rara	ENSRNOT00000024918|Apoa5|ENSRNOG00000018436|apolipoprotein A5 [Source:RGD Symbol%3BAcc:70903]
rn6_v1_chr11_-_64968437_64968437	0.0239292	Rara	ENSRNOT00000059541|Cox17|ENSRNOG00000038951|COX17 cytochrome c oxidase copper chaperone [Source:RGD Symbol%3BAcc:620548]
rn6_v1_chr8_-_65587658_65587658	0.0237382	Rara	ENSRNOT00000091982|Lrrc49|ENSRNOG00000012015|leucine rich repeat containing 49 [Source:RGD Symbol%3BAcc:1309466]
rn6_v1_chr5_-_50193571_50193571	0.0227094	Rara	ENSRNOT00000051243|Cfap206|ENSRNOG00000009061|cilia and flagella associated protein 206 [Source:RGD Symbol%3BAcc:1310641]
rn6_v1_chr20_+_3827367_3827367	0.0220372	Rara	ENSRNOT00000079967|Rxrb|ENSRNOG00000000464|retinoid X receptor beta [Source:RGD Symbol%3BAcc:3611]
rn6_v1_chr12_-_22006533_22006533	0.0189153	Rara	ENSRNOT00000059593|LOC100362783|ENSRNOG00000046006|Uncharacterized protein C7orf61 homolog [Source:RGD Symbol%3BAcc:2324075]
rn6_v1_chr13_+_47454591_47454591	0.0178436	Rara	ENSRNOT00000005791|LOC498222|ENSRNOG00000004341|similar to specifically androgen-regulated protein [Source:RGD Symbol%3BAcc:1565034]
rn6_v1_chr1_+_221538104_221538104	0.0177285	Rara	ENSRNOT00000028527|Batf2|ENSRNOG00000021018|basic leucine zipper ATF-like transcription factor 2 [Source:RGD Symbol%3BAcc:1311481]
rn6_v1_chr7_-_139223116_139223116	0.0173009	Rara	ENSRNOT00000086559|Endou|ENSRNOG00000056446|endonuclease%2C poly(U)-specific [Source:RGD Symbol%3BAcc:1593011]
rn6_v1_chr8_-_13420439_13420439	0.0169317	Rara	ENSRNOT00000051471|Izumo1r|ENSRNOG00000019894|IZUMO1 receptor%2C JUNO [Source:RGD Symbol%3BAcc:1585174]
rn6_v1_chr14_+_85230648_85230648	0.0154132	Rara	ENSRNOT00000089866|Ap1b1|ENSRNOG00000008786|adaptor-related protein complex 1%2C beta 1 subunit [Source:RGD Symbol%3BAcc:2064]
rn6_v1_chr8_-_50277797_50277797	0.0142555	Rara	ENSRNOT00000082508|Pafah1b2|ENSRNOG00000057102|platelet-activating factor acetylhydrolase 1b%2C catalytic subunit 2 [Source:RGD Symbol%3BAcc:620332]
rn6_v1_chr13_+_75111778_75111778	0.0138206	Rara	ENSRNOT00000006924|Tp53i3|ENSRNOG00000005177|tumor protein p53 inducible protein 3 [Source:RGD Symbol%3BAcc:1304982]
rn6_v1_chr3_-_122813583_122813583	0.0136595	Rara	ENSRNOT00000009681|Idh3B|ENSRNOG00000007316|isocitrate dehydrogenase 3 (NAD+) beta [Source:RGD Symbol%3BAcc:621881]
rn6_v1_chr6_-_26051229_26051229	0.0122513	Rara	ENSRNOT00000005855|Bre|ENSRNOG00000004364|brain and reproductive organ-expressed (TNFRSF1A modulator) [Source:RGD Symbol%3BAcc:735111]
rn6_v1_chr1_+_162447680_162447680	0.0116953	Rara	ENSRNOT00000016770|Ints4|ENSRNOG00000012552|integrator complex subunit 4 [Source:RGD Symbol%3BAcc:1305036]
rn6_v1_chrX_+_105537602_105537602	0.0115569	Rara	ENSRNOT00000029833|Armcx1|ENSRNOG00000037709|armadillo repeat containing%2C X-linked 1 [Source:RGD Symbol%3BAcc:1561629]
rn6_v1_chr4_-_11610518_11610518	0.0112587	Rara	ENSRNOT00000066643|Magi2|ENSRNOG00000013962|membrane associated guanylate kinase%2C WW and PDZ domain containing 2 [Source:RGD Symbol%3BAcc:621855]
rn6_v1_chr4_+_147514120_147514120	0.0108441	Rara	ENSRNOT00000013146|Mkrn2|ENSRNOG00000009176|makorin%2C ring finger protein%2C 2 [Source:RGD Symbol%3BAcc:1310618]
rn6_v1_chr15_-_4057104_4057157	0.0107074	Rara	ENSRNOT00000084350|Sec24c|ENSRNOG00000009042|SEC24 homolog C%2C COPII coat complex component [Source:RGD Symbol%3BAcc:1597739]	ENSRNOT00000012270|Sec24c|ENSRNOG00000009042|SEC24 homolog C%2C COPII coat complex component [Source:RGD Symbol%3BAcc:1597739]
rn6_v1_chr10_+_14216155_14216155	0.00953632	Rara	ENSRNOT00000020192|Hagh|ENSRNOG00000014743|hydroxyacyl glutathione hydrolase [Source:RGD Symbol%3BAcc:2779]
rn6_v1_chr11_-_84037938_84037938	0.00919558	Rara	ENSRNOT00000002327|Abcf3|ENSRNOG00000001710|ATP binding cassette subfamily F member 3 [Source:RGD Symbol%3BAcc:1310468]
rn6_v1_chr16_+_20432899_20432899	0.00889502	Rara	ENSRNOT00000026271|Mpv17l2|ENSRNOG00000019394|MPV17 mitochondrial inner membrane protein like 2 [Source:RGD Symbol%3BAcc:1308064]
rn6_v1_chr6_-_124429701_124429701	0.00872576	Rara	ENSRNOT00000037902|Ttc7b|ENSRNOG00000027300|tetratricopeptide repeat domain 7B [Source:RGD Symbol%3BAcc:1305920]	ENSRNOT00000080950|Ttc7b|ENSRNOG00000027300|tetratricopeptide repeat domain 7B [Source:RGD Symbol%3BAcc:1305920]
rn6_v1_chr6_+_111049559_111049559	0.00852394	Rara	ENSRNOT00000015571|Tmem63c|ENSRNOG00000011334|transmembrane protein 63c [Source:RGD Symbol%3BAcc:1310207]
rn6_v1_chr19_+_41932221_41932221	0.00744065	Rara	ENSRNOT00000059225|LOC103694328|ENSRNOG00000038766|alanine and glycine-rich protein-like [Source:RGD Symbol%3BAcc:9319286]
rn6_v1_chr8_-_118436894_118436894	0.006972	Rara	ENSRNOT00000073395|LOC100911807|ENSRNOG00000050492|ATR-interacting protein-like [Source:RGD Symbol%3BAcc:6490448]
rn6_v1_chr10_-_56444847_56444847	0.00633733	Rara	ENSRNOT00000056872|Nlgn2|ENSRNOG00000015430|neuroligin 2 [Source:RGD Symbol%3BAcc:621118]	ENSRNOT00000092662|Nlgn2|ENSRNOG00000015430|neuroligin 2 [Source:RGD Symbol%3BAcc:621118]
rn6_v1_chr10_-_77512032_77512032	0.00617127	Rara	ENSRNOT00000003295|Pctp|ENSRNOG00000002425|phosphatidylcholine transfer protein [Source:RGD Symbol%3BAcc:3276]
rn6_v1_chr5_+_159993799_159993799	0.00555178	Rara	ENSRNOT00000014399|Zbtb17|ENSRNOG00000010436|zinc finger and BTB domain containing 17 [Source:RGD Symbol%3BAcc:1307143]
rn6_v1_chr1_+_16819170_16819249	0.00519547	Rara	ENSRNOT00000019734|Hbs1l|ENSRNOG00000014531|HBS1-like translational GTPase [Source:RGD Symbol%3BAcc:1308509]	ENSRNOT00000086756|Hbs1l|ENSRNOG00000014531|HBS1-like translational GTPase [Source:RGD Symbol%3BAcc:1308509]
rn6_v1_chr7_+_73270455_73270455	0.00490285	Rara	ENSRNOT00000007190|Pop1|ENSRNOG00000005243|POP1 homolog%2C ribonuclease P/MRP subunit [Source:RGD Symbol%3BAcc:1308609]
rn6_v1_chr4_-_17594598_17594598	0.00488921	Rara	ENSRNOT00000008936|Sema3e|ENSRNOG00000006631|semaphorin 3E [Source:RGD Symbol%3BAcc:1310973]
rn6_v1_chr17_+_76410585_76410585	0.00482107	Rara	ENSRNOT00000024016|Cdc123|ENSRNOG00000017770|cell division cycle 123 [Source:RGD Symbol%3BAcc:619766]
rn6_v1_chr18_+_48434652_48434652	0.00481392	Rara	ENSRNOT00000047755|Prdm6|ENSRNOG00000030486|PR/SET domain 6 [Source:RGD Symbol%3BAcc:1559594]
rn6_v1_chr7_+_30699476_30699476	0.00466555	Rara	ENSRNOT00000059269|Anks1b|ENSRNOG00000024870|ankyrin repeat and sterile alpha motif domain containing 1B [Source:RGD Symbol%3BAcc:1565556]
rn6_v1_chr13_+_89253617_89253617	0.00450757	Rara	ENSRNOT00000044575|LOC100362384|ENSRNOG00000031540|ferritin light chain 1-like [Source:RGD Symbol%3BAcc:2318303]
rn6_v1_chr12_-_21746236_21746236	0.00384362	Rara	ENSRNOT00000001869|LOC102550456|ENSRNOG00000024616|TSC22 domain family protein 4-like [Source:RGD Symbol%3BAcc:7605479]
rn6_v1_chr10_+_13410899_13410963	0.00353254	Rara	ENSRNOT00000007392|Prss27|ENSRNOG00000005336|protease%2C serine 27 [Source:RGD Symbol%3BAcc:1303256]	ENSRNOT00000070981|Prss27|ENSRNOG00000005336|protease%2C serine 27 [Source:RGD Symbol%3BAcc:1303256]
rn6_v1_chr2_-_123193130_123193130	0.00342343	Rara	ENSRNOT00000019554|Anxa5|ENSRNOG00000014453|annexin A5 [Source:RGD Symbol%3BAcc:2120]
rn6_v1_chr7_-_101138373_101138373	0.00327901	Rara	ENSRNOT00000043257|LOC500877|ENSRNOG00000029292|Ab1-152 [Source:RGD Symbol%3BAcc:1563390]
rn6_v1_chr13_-_52197205_52197205	0.00294519	Rara	ENSRNOT00000009712|Shisa4|ENSRNOG00000007369|shisa family member 4 [Source:RGD Symbol%3BAcc:1312041]
rn6_v1_chr12_+_22142520_22142520	0.00287289	Rara	ENSRNOT00000038397|Fbxo24|ENSRNOG00000024922|F-box protein 24 [Source:RGD Symbol%3BAcc:1305095]
rn6_v1_chr10_-_14215957_14215957	0.0027467	Rara	ENSRNOT00000019767|Fahd1|ENSRNOG00000014727|fumarylacetoacetate hydrolase domain containing 1 [Source:RGD Symbol%3BAcc:1304560]
rn6_v1_chr10_+_10774639_10774639	0.00265279	Rara	ENSRNOT00000061208|Sept12|ENSRNOG00000003137|septin 12 [Source:RGD Symbol%3BAcc:1565511]
rn6_v1_chr2_+_188543137_188543137	0.0025299	Rara	ENSRNOT00000027850|Muc1|ENSRNOG00000020539|mucin 1%2C cell surface associated [Source:RGD Symbol%3BAcc:3122]
rn6_v1_chr10_+_90348299_90348299	0.00227406	Rara	ENSRNOT00000089616|Rundc3a|ENSRNOG00000020970|RUN domain containing 3A [Source:RGD Symbol%3BAcc:735057]
rn6_v1_chr7_+_130532435_130532435	0.0022054	Rara	ENSRNOT00000092672|Shank3|ENSRNOG00000052296|SH3 and multiple ankyrin repeat domains 3 [Source:RGD Symbol%3BAcc:69264]	ENSRNOT00000092535|Shank3|ENSRNOG00000052296|SH3 and multiple ankyrin repeat domains 3 [Source:RGD Symbol%3BAcc:69264]
rn6_v1_chr12_+_2579887_2579887	0.0017916	Rara	ENSRNOT00000068586|Prr36|ENSRNOG00000028892|proline rich 36 [Source:RGD Symbol%3BAcc:1566084]	ENSRNOT00000043197|Prr36|ENSRNOG00000028892|proline rich 36 [Source:RGD Symbol%3BAcc:1566084]
rn6_v1_chr1_-_64350338_64350338	0.00163331	Rara	ENSRNOT00000078444|Cacng8|ENSRNOG00000057848|calcium voltage-gated channel auxiliary subunit gamma 8 [Source:RGD Symbol%3BAcc:628808]
rn6_v1_chr17_-_76410294_76410294	0.00120657	Rara	ENSRNOT00000023892|Nudt5|ENSRNOG00000017741|nudix hydrolase 5 [Source:RGD Symbol%3BAcc:1359284]
rn6_v1_chr1_-_173682226_173682226	0.000492523	Rara	ENSRNOT00000020137|Ric3|ENSRNOG00000014691|RIC3 acetylcholine receptor chaperone [Source:RGD Symbol%3BAcc:1588939]
rn6_v1_chr20_+_6397022_6397022	0.000399296	Rara	ENSRNOT00000002553|Rab44|ENSRNOG00000001869|RAB44%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:1560150]
