rn6_v1_chr20_-_14573519_14573519	0.938235	Rfx3_Rfx1_Rfx4	ENSRNOT00000001772|Rab36|ENSRNOG00000001311|RAB36%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:1596098]
rn6_v1_chr6_+_8886591_8886730	0.916225	Rfx3_Rfx1_Rfx4	ENSRNOT00000091510|Six3|ENSRNOG00000057031|SIX homeobox 3 [Source:RGD Symbol%3BAcc:620909]	ENSRNOT00000089174|Six3|ENSRNOG00000057031|SIX homeobox 3 [Source:RGD Symbol%3BAcc:620909]
rn6_v1_chr11_+_88424414_88424414	0.912319	Rfx3_Rfx1_Rfx4	ENSRNOT00000022328|Spag6l|ENSRNOG00000025787|sperm associated antigen 6-like [Source:RGD Symbol%3BAcc:1310892]
rn6_v1_chr17_-_88095729_88095729	0.898718	Rfx3_Rfx1_Rfx4	ENSRNOT00000025140|Enkur|ENSRNOG00000018631|enkurin%2C TRPC channel interacting protein [Source:RGD Symbol%3BAcc:1309839]
rn6_v1_chr2_+_164549455_164549455	0.782068	Rfx3_Rfx1_Rfx4	ENSRNOT00000017151|Mlf1|ENSRNOG00000012827|myeloid leukemia factor 1 [Source:RGD Symbol%3BAcc:1306854]
rn6_v1_chr2_-_195712461_195712461	0.779579	Rfx3_Rfx1_Rfx4	ENSRNOT00000056449|Riiad1|ENSRNOG00000037310|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 [Source:RGD Symbol%3BAcc:2303311]
rn6_v1_chr12_+_22665112_22665112	0.777443	Rfx3_Rfx1_Rfx4	ENSRNOT00000001918|Ap1s1|ENSRNOG00000001415|adaptor-related protein complex 1%2C sigma 1 subunit [Source:RGD Symbol%3BAcc:1305911]
rn6_v1_chr10_+_96663740_96663740	0.755069	Rfx3_Rfx1_Rfx4	ENSRNOT00000037067|Cep112|ENSRNOG00000024557|centrosomal protein 112 [Source:RGD Symbol%3BAcc:1564168]
rn6_v1_chr2_-_208623314_208623314	0.746787	Rfx3_Rfx1_Rfx4	ENSRNOT00000022731|Pifo|ENSRNOG00000016842|primary cilia formation [Source:RGD Symbol%3BAcc:1586282]
rn6_v1_chr7_-_18577325_18577368	0.735041	Rfx3_Rfx1_Rfx4	ENSRNOT00000084308|March2|ENSRNOG00000007769|membrane associated ring-CH-type finger 2 [Source:RGD Symbol%3BAcc:1306395]	ENSRNOT00000090849|March2|ENSRNOG00000007769|membrane associated ring-CH-type finger 2 [Source:RGD Symbol%3BAcc:1306395]
rn6_v1_chr1_-_199037267_199037267	0.733987	Rfx3_Rfx1_Rfx4	ENSRNOT00000078779|Ccdc189|ENSRNOG00000053015|coiled-coil domain containing 189 [Source:RGD Symbol%3BAcc:1593368]
rn6_v1_chr2_-_211322719_211322719	0.727623	Rfx3_Rfx1_Rfx4	ENSRNOT00000027493|RGD1310209|ENSRNOG00000020272|similar to KIAA1324 protein [Source:RGD Symbol%3BAcc:1310209]
rn6_v1_chr1_-_226501920_226501920	0.657401	Rfx3_Rfx1_Rfx4	ENSRNOT00000050716|Lrrc10b|ENSRNOG00000030180|leucine rich repeat containing 10B [Source:RGD Symbol%3BAcc:1564983]
rn6_v1_chr1_+_188571953_188571953	0.611598	Rfx3_Rfx1_Rfx4	ENSRNOT00000055096|Iqck|ENSRNOG00000036758|IQ motif containing K [Source:RGD Symbol%3BAcc:6502881]
rn6_v1_chr12_+_2534212_2534212	0.593775	Rfx3_Rfx1_Rfx4	ENSRNOT00000001399|Ctxn1|ENSRNOG00000001057|cortexin 1 [Source:RGD Symbol%3BAcc:2449]
rn6_v1_chr16_-_21338771_21338771	0.593718	Rfx3_Rfx1_Rfx4	ENSRNOT00000014265|Pbx4|ENSRNOG00000010736|PBX homeobox 4 [Source:RGD Symbol%3BAcc:1305100]
rn6_v1_chr4_-_157304653_157304653	0.587724	Rfx3_Rfx1_Rfx4	ENSRNOT00000051613|Lrrc23|ENSRNOG00000026309|leucine rich repeat containing 23 [Source:RGD Symbol%3BAcc:1304779]
rn6_v1_chr1_+_78893271_78893271	0.586567	Rfx3_Rfx1_Rfx4	ENSRNOT00000029825|Pnmal1|ENSRNOG00000027944|paraneoplastic Ma antigen family-like 1 [Source:RGD Symbol%3BAcc:1310803]
rn6_v1_chr12_+_47074200_47074200	0.569156	Rfx3_Rfx1_Rfx4	ENSRNOT00000014910|Dynll1|ENSRNOG00000011222|dynein light chain LC8-type 1 [Source:RGD Symbol%3BAcc:619866]
rn6_v1_chr9_-_94601852_94601852	0.54854	Rfx3_Rfx1_Rfx4	ENSRNOT00000022485|Ngef|ENSRNOG00000016653|neuronal guanine nucleotide exchange factor [Source:RGD Symbol%3BAcc:1309055]
rn6_v1_chr3_-_7632345_7632345	0.544443	Rfx3_Rfx1_Rfx4	ENSRNOT00000049889|Cfap77|ENSRNOG00000028805|cilia and flagella associated protein 77 [Source:RGD Symbol%3BAcc:1564114]
rn6_v1_chr10_+_57185347_57185401	0.536752	Rfx3_Rfx1_Rfx4	ENSRNOT00000040488|Mink1|ENSRNOG00000033508|misshapen-like kinase 1 [Source:RGD Symbol%3BAcc:1359135]	ENSRNOT00000086374|Mink1|ENSRNOG00000033508|misshapen-like kinase 1 [Source:RGD Symbol%3BAcc:1359135]
rn6_v1_chr9_+_20241062_20241062	0.518204	Rfx3_Rfx1_Rfx4	ENSRNOT00000071593|LOC100911585|ENSRNOG00000047890|leucine-rich repeat-containing protein 23-like [Source:RGD Symbol%3BAcc:6491966]
rn6_v1_chr1_-_145931583_145931583	0.51057	Rfx3_Rfx1_Rfx4	ENSRNOT00000016433|Cfap161|ENSRNOG00000012301|cilia and flagella associated protein 161 [Source:RGD Symbol%3BAcc:1310371]
rn6_v1_chr3_-_102151489_102151489	0.508734	Rfx3_Rfx1_Rfx4	ENSRNOT00000006349|Ano3|ENSRNOG00000004731|anoctamin 3 [Source:RGD Symbol%3BAcc:1308873]
rn6_v1_chr1_+_205842489_205842489	0.503622	Rfx3_Rfx1_Rfx4	ENSRNOT00000081610|Fank1|ENSRNOG00000018327|fibronectin type 3 and ankyrin repeat domains 1 [Source:RGD Symbol%3BAcc:1304756]
rn6_v1_chr7_-_120744602_120744602	0.490181	Rfx3_Rfx1_Rfx4	ENSRNOT00000018564|Kcnj4|ENSRNOG00000013869|potassium voltage-gated channel subfamily J member 4 [Source:RGD Symbol%3BAcc:621436]
rn6_v1_chr15_+_27875911_27875911	0.490171	Rfx3_Rfx1_Rfx4	ENSRNOT00000013582|Pnp|ENSRNOG00000009982|purine nucleoside phosphorylase [Source:RGD Symbol%3BAcc:1597189]
rn6_v1_chr2_-_144467912_144467912	0.488171	Rfx3_Rfx1_Rfx4	ENSRNOT00000040002|Ccna1|ENSRNOG00000014052|cyclin A1 [Source:RGD Symbol%3BAcc:1310639]
rn6_v1_chr5_-_143062226_143062226	0.487058	Rfx3_Rfx1_Rfx4	ENSRNOT00000029388|Dnali1|ENSRNOG00000024957|dynein%2C axonemal%2C light intermediate chain 1 [Source:RGD Symbol%3BAcc:1309260]
rn6_v1_chr3_-_123702732_123702732	0.485948	Rfx3_Rfx1_Rfx4	ENSRNOT00000028859|RGD1311739|ENSRNOG00000021245|similar to RIKEN cDNA 1700037H04 [Source:RGD Symbol%3BAcc:1311739]
rn6_v1_chr5_+_61474000_61474000	0.472151	Rfx3_Rfx1_Rfx4	ENSRNOT00000013930|Ccdc180|ENSRNOG00000010412|coiled-coil domain containing 180 [Source:RGD Symbol%3BAcc:6498132]
rn6_v1_chr8_-_6235967_6235967	0.469923	Rfx3_Rfx1_Rfx4	ENSRNOT00000068290|LOC654482|ENSRNOG00000043410|hypothetical protein LOC654482 [Source:RGD Symbol%3BAcc:1591894]
rn6_v1_chr6_+_137953545_137953545	0.458178	Rfx3_Rfx1_Rfx4	ENSRNOT00000006804|Crip2|ENSRNOG00000005041|cysteine-rich protein 2 [Source:RGD Symbol%3BAcc:1302959]
rn6_v1_chr12_-_6703979_6703979	0.457149	Rfx3_Rfx1_Rfx4	ENSRNOT00000061246|Tex26|ENSRNOG00000000905|testis expressed 26 [Source:RGD Symbol%3BAcc:1560846]
rn6_v1_chr12_+_24803686_24803686	0.454184	Rfx3_Rfx1_Rfx4	ENSRNOT00000033499|Wbscr28|ENSRNOG00000001474|Williams-Beuren syndrome chromosome region 28 [Source:RGD Symbol%3BAcc:1561903]
rn6_v1_chr8_-_55491152_55491152	0.450886	Rfx3_Rfx1_Rfx4	ENSRNOT00000014965|LOC100359479|ENSRNOG00000043383|rCG58364-like [Source:RGD Symbol%3BAcc:2323814]
rn6_v1_chr7_+_139762614_139762614	0.446706	Rfx3_Rfx1_Rfx4	ENSRNOT00000031157|Ccdc184|ENSRNOG00000021945|coiled-coil domain containing 184 [Source:RGD Symbol%3BAcc:1593153]
rn6_v1_chr11_-_90234286_90234286	0.428459	Rfx3_Rfx1_Rfx4	ENSRNOT00000071986|Efcab1|ENSRNOG00000050091|EF hand calcium binding domain 1 [Source:RGD Symbol%3BAcc:1594548]
rn6_v1_chr10_-_57671080_57671080	0.42386	Rfx3_Rfx1_Rfx4	ENSRNOT00000082511|LOC691995|ENSRNOG00000059827|hypothetical protein LOC691995 [Source:RGD Symbol%3BAcc:1593297]
rn6_v1_chr20_-_10680283_10680283	0.415822	Rfx3_Rfx1_Rfx4	ENSRNOT00000001579|Sik1|ENSRNOG00000001189|salt-inducible kinase 1 [Source:RGD Symbol%3BAcc:69407]
rn6_v1_chr1_+_265298868_265298868	0.41473	Rfx3_Rfx1_Rfx4	ENSRNOT00000023278|Dpcd|ENSRNOG00000017241|deleted in primary ciliary dyskinesia [Source:RGD Symbol%3BAcc:1307648]
rn6_v1_chr8_-_13290773_13290773	0.409925	Rfx3_Rfx1_Rfx4	ENSRNOT00000012217|RGD1561795|ENSRNOG00000009203|similar to RIKEN cDNA 1700012B09 [Source:RGD Symbol%3BAcc:1561795]
rn6_v1_chr10_-_54512169_54512169	0.409676	Rfx3_Rfx1_Rfx4	ENSRNOT00000005066|Cfap52|ENSRNOG00000037718|cilia and flagella associated protein 52 [Source:RGD Symbol%3BAcc:1308151]
rn6_v1_chr5_-_135994848_135994848	0.408421	Rfx3_Rfx1_Rfx4	ENSRNOT00000067675|Btbd19|ENSRNOG00000042163|BTB domain containing 19 [Source:RGD Symbol%3BAcc:2320529]
rn6_v1_chr7_+_12652415_12652415	0.401446	Rfx3_Rfx1_Rfx4	ENSRNOT00000031315|Plppr3|ENSRNOG00000027940|phospholipid phosphatase related 3 [Source:RGD Symbol%3BAcc:727823]
rn6_v1_chr14_-_43584343_43584343	0.401258	Rfx3_Rfx1_Rfx4	ENSRNOT00000039835|Nsun7|ENSRNOG00000025494|NOP2/Sun RNA methyltransferase family member 7 [Source:RGD Symbol%3BAcc:1310137]
rn6_v1_chr7_-_144837583_144837583	0.391439	Rfx3_Rfx1_Rfx4	ENSRNOT00000055289|Cbx5|ENSRNOG00000036841|chromobox 5 [Source:RGD Symbol%3BAcc:1306619]
rn6_v1_chr19_-_10380809_10380809	0.391378	Rfx3_Rfx1_Rfx4	ENSRNOT00000031064|Drc7|ENSRNOG00000025860|dynein regulatory complex subunit 7 [Source:RGD Symbol%3BAcc:1565601]
rn6_v1_chr1_+_78739930_78739930	0.387852	Rfx3_Rfx1_Rfx4	ENSRNOT00000021976|Strn4|ENSRNOG00000016145|striatin 4 [Source:RGD Symbol%3BAcc:1307030]
rn6_v1_chr1_+_72874404_72874404	0.384613	Rfx3_Rfx1_Rfx4	ENSRNOT00000058900|Dnaaf3|ENSRNOG00000038600|dynein%2C axonemal%2C assembly factor 3 [Source:RGD Symbol%3BAcc:2323487]
rn6_v1_chr3_+_160047296_160047296	0.377514	Rfx3_Rfx1_Rfx4	ENSRNOT00000051590|Pkig|ENSRNOG00000010235|cAMP-dependent protein kinase inhibitor gamma [Source:RGD Symbol%3BAcc:628775]
rn6_v1_chr1_-_266074181_266074181	0.376048	Rfx3_Rfx1_Rfx4	ENSRNOT00000026378|Psd|ENSRNOG00000019435|pleckstrin and Sec7 domain containing [Source:RGD Symbol%3BAcc:620297]
rn6_v1_chr19_-_10653800_10653800	0.352544	Rfx3_Rfx1_Rfx4	ENSRNOT00000022128|Cx3cl1|ENSRNOG00000016326|C-X3-C motif chemokine ligand 1 [Source:RGD Symbol%3BAcc:620458]
rn6_v1_chr10_-_61744976_61745097	0.349778	Rfx3_Rfx1_Rfx4	ENSRNOT00000079926|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]	ENSRNOT00000092314|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]	ENSRNOT00000034298|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]
rn6_v1_chr12_-_6341902_6341902	0.344723	Rfx3_Rfx1_Rfx4	ENSRNOT00000001201|Hsph1|ENSRNOG00000000902|heat shock protein family H (Hsp110) member 1 [Source:RGD Symbol%3BAcc:1311609]
rn6_v1_chr19_+_52225582_52225582	0.343884	Rfx3_Rfx1_Rfx4	ENSRNOT00000020917|Dnaaf1|ENSRNOG00000015590|dynein%2C axonemal%2C assembly factor 1 [Source:RGD Symbol%3BAcc:1310542]
rn6_v1_chr4_+_2053712_2053712	0.343711	Rfx3_Rfx1_Rfx4	ENSRNOT00000045086|Rnf32|ENSRNOG00000005691|ring finger protein 32 [Source:RGD Symbol%3BAcc:1308287]
rn6_v1_chr10_+_14062331_14062331	0.342512	Rfx3_Rfx1_Rfx4	ENSRNOT00000029652|Noxo1|ENSRNOG00000025117|NADPH oxidase organizer 1 [Source:RGD Symbol%3BAcc:1307802]
rn6_v1_chr1_+_220335254_220335254	0.341431	Rfx3_Rfx1_Rfx4	ENSRNOT00000072261|Rin1|ENSRNOG00000050223|Ras and Rab interactor 1 [Source:RGD Symbol%3BAcc:620006]
rn6_v1_chr5_+_140712583_140712583	0.340662	Rfx3_Rfx1_Rfx4	ENSRNOT00000019587|Trit1|ENSRNOG00000014274|tRNA isopentenyltransferase 1 [Source:RGD Symbol%3BAcc:1304781]
rn6_v1_chr9_-_17114177_17114177	0.338303	Rfx3_Rfx1_Rfx4	ENSRNOT00000061185|Lrrc73|ENSRNOG00000039856|leucine rich repeat containing 73 [Source:RGD Symbol%3BAcc:1561390]
rn6_v1_chrX_+_135470915_135470915	0.330994	Rfx3_Rfx1_Rfx4	ENSRNOT00000009637|Slc25a14|ENSRNOG00000006871|solute carrier family 25 member 14 [Source:RGD Symbol%3BAcc:621433]
rn6_v1_chr16_-_49820235_49820235	0.327969	Rfx3_Rfx1_Rfx4	ENSRNOT00000029628|Sorbs2|ENSRNOG00000013391|sorbin and SH3 domain containing 2 [Source:RGD Symbol%3BAcc:620061]
rn6_v1_chr7_+_27240876_27240876	0.324796	Rfx3_Rfx1_Rfx4	ENSRNOT00000091725|LOC362863|ENSRNOG00000026807|first gene upstream of Nt5dc3 [Source:RGD Symbol%3BAcc:1302940]
rn6_v1_chr9_+_81644355_81644355	0.323466	Rfx3_Rfx1_Rfx4	ENSRNOT00000071700|Catip|ENSRNOG00000037835|ciliogenesis associated TTC17 interacting protein [Source:RGD Symbol%3BAcc:1596071]
rn6_v1_chr15_-_8914501_8914501	0.321006	Rfx3_Rfx1_Rfx4	ENSRNOT00000008752|Thrb|ENSRNOG00000006649|thyroid hormone receptor beta [Source:RGD Symbol%3BAcc:3858]
rn6_v1_chr8_+_64364741_64364741	0.320849	Rfx3_Rfx1_Rfx4	ENSRNOT00000082840|Celf6|ENSRNOG00000052224|CUGBP%2C Elav-like family member 6 [Source:RGD Symbol%3BAcc:1310451]
rn6_v1_chr13_-_105684374_105684374	0.311992	Rfx3_Rfx1_Rfx4	ENSRNOT00000073142|Spata17|ENSRNOG00000002504|spermatogenesis associated 17 [Source:RGD Symbol%3BAcc:1565282]
rn6_v1_chr4_+_114854458_114854458	0.307477	Rfx3_Rfx1_Rfx4	ENSRNOT00000013312|LOC500227|ENSRNOG00000009917|hypothetical gene supported by BC079424 [Source:RGD Symbol%3BAcc:1566019]
rn6_v1_chr1_+_84070983_84070983	0.305078	Rfx3_Rfx1_Rfx4	ENSRNOT00000090478|Numbl|ENSRNOG00000020867|NUMB-like%2C endocytic adaptor protein [Source:RGD Symbol%3BAcc:1307579]
rn6_v1_chr8_-_130475320_130475320	0.303617	Rfx3_Rfx1_Rfx4	ENSRNOT00000075439|Ccdc13|ENSRNOG00000025643|coiled-coil domain containing 13 [Source:RGD Symbol%3BAcc:1586605]
rn6_v1_chrX_+_32495809_32495809	0.301725	Rfx3_Rfx1_Rfx4	ENSRNOT00000020999|RGD1565844|ENSRNOG00000004120|similar to RIKEN cDNA 1700045I19 [Source:RGD Symbol%3BAcc:1565844]
rn6_v1_chr19_-_38321528_38321528	0.298041	Rfx3_Rfx1_Rfx4	ENSRNOT00000031977|Smpd3|ENSRNOG00000000257|sphingomyelin phosphodiesterase 3 [Source:RGD Symbol%3BAcc:619754]
rn6_v1_chr20_-_4392343_4392343	0.297974	Rfx3_Rfx1_Rfx4	ENSRNOT00000080476|Ppt2|ENSRNOG00000000435|palmitoyl-protein thioesterase 2 [Source:RGD Symbol%3BAcc:620375]
rn6_v1_chr1_-_129780356_129780356	0.293886	Rfx3_Rfx1_Rfx4	ENSRNOT00000077479|Arrdc4|ENSRNOG00000010775|arrestin domain containing 4 [Source:RGD Symbol%3BAcc:1311763]
rn6_v1_chr10_-_89338739_89338739	0.292777	Rfx3_Rfx1_Rfx4	ENSRNOT00000073923|Ptges3l|ENSRNOG00000050347|prostaglandin E synthase 3 like [Source:RGD Symbol%3BAcc:9413039]
rn6_v1_chr8_-_106858543_106858543	0.291315	Rfx3_Rfx1_Rfx4	ENSRNOT00000051939|LOC103690070|ENSRNOG00000029029|coxsackievirus and adenovirus receptor-like [Source:RGD Symbol%3BAcc:9262300]
rn6_v1_chr8_+_79638696_79638696	0.291283	Rfx3_Rfx1_Rfx4	ENSRNOT00000085959|Dyx1c1|ENSRNOG00000056654|dyslexia susceptibility 1 candidate 1 [Source:RGD Symbol%3BAcc:1549760]
rn6_v1_chr10_+_55653946_55653946	0.286759	Rfx3_Rfx1_Rfx4	ENSRNOT00000008787|Tmem107|ENSRNOG00000006519|transmembrane protein 107 [Source:RGD Symbol%3BAcc:1595972]
rn6_v1_chr14_-_81100803_81100803	0.286683	Rfx3_Rfx1_Rfx4	ENSRNOT00000014692|Msantd1|ENSRNOG00000010867|Myb/SANT DNA binding domain containing 1 [Source:RGD Symbol%3BAcc:1565796]
rn6_v1_chr2_-_33841499_33841499	0.286446	Rfx3_Rfx1_Rfx4	ENSRNOT00000040533|Srek1|ENSRNOG00000032735|splicing regulatory glutamic acid and lysine rich protein 1 [Source:RGD Symbol%3BAcc:621696]
rn6_v1_chr7_-_144837395_144837395	0.28625	Rfx3_Rfx1_Rfx4	ENSRNOT00000089024|Cbx5|ENSRNOG00000036841|chromobox 5 [Source:RGD Symbol%3BAcc:1306619]
rn6_v1_chr3_+_148438939_148438939	0.284897	Rfx3_Rfx1_Rfx4	ENSRNOT00000064196|Ttll9|ENSRNOG00000008596|tubulin tyrosine ligase like 9 [Source:RGD Symbol%3BAcc:1359622]
rn6_v1_chr1_+_214182830_214182830	0.284213	Rfx3_Rfx1_Rfx4	ENSRNOT00000022867|Lrrc56|ENSRNOG00000016697|leucine rich repeat containing 56 [Source:RGD Symbol%3BAcc:1311654]
rn6_v1_chr3_+_80833272_80833272	0.283934	Rfx3_Rfx1_Rfx4	ENSRNOT00000023583|Chrm4|ENSRNOG00000017556|cholinergic receptor%2C muscarinic 4 [Source:RGD Symbol%3BAcc:2344]
rn6_v1_chr10_+_58776792_58776792	0.277835	Rfx3_Rfx1_Rfx4	ENSRNOT00000019574|Txndc17|ENSRNOG00000014072|thioredoxin domain containing 17 [Source:RGD Symbol%3BAcc:1308868]
rn6_v1_chr2_-_30340103_30340208	0.277609	Rfx3_Rfx1_Rfx4	ENSRNOT00000024023|Bdp1|ENSRNOG00000017864|B double prime 1%2C subunit of RNA polymerase III transcription initiation factor IIIB [Source:RGD Symbol%3BAcc:1308512]	ENSRNOT00000067722|Bdp1|ENSRNOG00000017864|B double prime 1%2C subunit of RNA polymerase III transcription initiation factor IIIB [Source:RGD Symbol%3BAcc:1308512]
rn6_v1_chr1_-_82120902_82120902	0.272161	Rfx3_Rfx1_Rfx4	ENSRNOT00000027684|Erf|ENSRNOG00000020426|Ets2 repressor factor [Source:RGD Symbol%3BAcc:1311991]
rn6_v1_chr8_+_90343154_90343154	0.27133	Rfx3_Rfx1_Rfx4	ENSRNOT00000068482|Irak1bp1|ENSRNOG00000008984|interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:RGD Symbol%3BAcc:1305012]
rn6_v1_chr18_-_73360373_73360373	0.268843	Rfx3_Rfx1_Rfx4	ENSRNOT00000048702|Katnal2|ENSRNOG00000017788|katanin catalytic subunit A1 like 2 [Source:RGD Symbol%3BAcc:1564708]
rn6_v1_chr5_+_140870140_140870140	0.267072	Rfx3_Rfx1_Rfx4	ENSRNOT00000074347|Hpcal4|ENSRNOG00000050983|hippocalcin-like 4 [Source:RGD Symbol%3BAcc:708491]
rn6_v1_chr2_+_206064179_206064179	0.265986	Rfx3_Rfx1_Rfx4	ENSRNOT00000025953|Syt6|ENSRNOG00000019163|synaptotagmin 6 [Source:RGD Symbol%3BAcc:62012]
rn6_v1_chr8_-_79660439_79660439	0.265578	Rfx3_Rfx1_Rfx4	ENSRNOT00000089949|Ccpg1os|ENSRNOG00000052869|cell cycle progression 1%2C opposite strand [Source:RGD Symbol%3BAcc:1594626]
rn6_v1_chr9_+_88964525_88964525	0.264619	Rfx3_Rfx1_Rfx4	ENSRNOT00000068236|Daw1|ENSRNOG00000016247|dynein assembly factor with WD repeats 1 [Source:RGD Symbol%3BAcc:1561436]
rn6_v1_chr20_+_4959294_4959294	0.264617	Rfx3_Rfx1_Rfx4	ENSRNOT00000074223|Hspa1l|ENSRNOG00000047966|heat shock protein family A (Hsp70) member 1 like [Source:RGD Symbol%3BAcc:1595925]
rn6_v1_chr2_-_187820952_187820952	0.264412	Rfx3_Rfx1_Rfx4	ENSRNOT00000092762|Sema4a|ENSRNOG00000019737|semaphorin 4A [Source:RGD Symbol%3BAcc:1304636]
rn6_v1_chr1_-_188373571_188373571	0.26193	Rfx3_Rfx1_Rfx4	ENSRNOT00000075020|Knop1|ENSRNOG00000048270|lysine-rich nucleolar protein 1 [Source:RGD Symbol%3BAcc:1565096]
rn6_v1_chr6_-_27024129_27024129	0.261056	Rfx3_Rfx1_Rfx4	ENSRNOT00000012273|Dpysl5|ENSRNOG00000008996|dihydropyrimidinase-like 5 [Source:RGD Symbol%3BAcc:620467]
rn6_v1_chr5_+_169519212_169519212	0.258813	Rfx3_Rfx1_Rfx4	ENSRNOT00000024732|Chd5|ENSRNOG00000011268|chromodomain helicase DNA binding protein 5 [Source:RGD Symbol%3BAcc:1582725]
rn6_v1_chr4_+_172709724_172709724	0.257016	Rfx3_Rfx1_Rfx4	ENSRNOT00000010707|Igbp1b|ENSRNOG00000008125|immunoglobulin (CD79A) binding protein 1b [Source:RGD Symbol%3BAcc:1560971]
rn6_v1_chr7_-_74901997_74901997	0.255477	Rfx3_Rfx1_Rfx4	ENSRNOT00000039378|Rgs22|ENSRNOG00000025551|regulator of G-protein signaling 22 [Source:RGD Symbol%3BAcc:1565493]
rn6_v1_chr19_+_56010085_56010085	0.249524	Rfx3_Rfx1_Rfx4	ENSRNOT00000058216|Spata33|ENSRNOG00000038239|spermatogenesis associated 33 [Source:RGD Symbol%3BAcc:1561507]
rn6_v1_chr1_-_281101438_281101438	0.248297	Rfx3_Rfx1_Rfx4	ENSRNOT00000012734|Rab11fip2|ENSRNOG00000009523|RAB11 family interacting protein 2 [Source:RGD Symbol%3BAcc:1308538]
rn6_v1_chr8_+_107699480_107699480	0.24771	Rfx3_Rfx1_Rfx4	ENSRNOT00000048864|Nme9|ENSRNOG00000031523|NME/NM23 family member 9 [Source:MGI Symbol%3BAcc:MGI:4359686]
rn6_v1_chr13_-_70174565_70174565	0.244464	Rfx3_Rfx1_Rfx4	ENSRNOT00000067135|Rgl1|ENSRNOG00000002347|ral guanine nucleotide dissociation stimulator%2C-like 1 [Source:RGD Symbol%3BAcc:1308947]
rn6_v1_chr5_+_153845094_153845094	0.243303	Rfx3_Rfx1_Rfx4	ENSRNOT00000041600|Stpg1|ENSRNOG00000031448|sperm-tail PG-rich repeat containing 1 [Source:RGD Symbol%3BAcc:1560169]
rn6_v1_chr3_-_110021149_110021149	0.242579	Rfx3_Rfx1_Rfx4	ENSRNOT00000007808|Fsip1|ENSRNOG00000005888|fibrous sheath interacting protein 1 [Source:RGD Symbol%3BAcc:1306874]
rn6_v1_chr6_+_109617596_109617643	0.240777	Rfx3_Rfx1_Rfx4	ENSRNOT00000085031|Flvcr2|ENSRNOG00000008754|feline leukemia virus subgroup C cellular receptor family%2C member 2 [Source:RGD Symbol%3BAcc:735098]	ENSRNOT00000089972|Flvcr2|ENSRNOG00000008754|feline leukemia virus subgroup C cellular receptor family%2C member 2 [Source:RGD Symbol%3BAcc:735098]	ENSRNOT00000082402|Flvcr2|ENSRNOG00000008754|feline leukemia virus subgroup C cellular receptor family%2C member 2 [Source:RGD Symbol%3BAcc:735098]
rn6_v1_chr5_+_159735008_159735008	0.240055	Rfx3_Rfx1_Rfx4	ENSRNOT00000064310|Rsg1|ENSRNOG00000023346|REM2 and RAB-like small GTPase 1 [Source:RGD Symbol%3BAcc:1561421]
rn6_v1_chrX_+_122808605_122808605	0.23986	Rfx3_Rfx1_Rfx4	ENSRNOT00000017567|Zcchc12|ENSRNOG00000013162|zinc finger CCHC-type containing 12 [Source:RGD Symbol%3BAcc:1359439]
rn6_v1_chr4_-_126071261_126071261	0.23845	Rfx3_Rfx1_Rfx4	ENSRNOT00000080234|LOC100361920|ENSRNOG00000052174|dynein light chain 1-like [Source:RGD Symbol%3BAcc:2319160]
rn6_v1_chr13_+_83681322_83681322	0.236105	Rfx3_Rfx1_Rfx4	ENSRNOT00000004206|Mpc2|ENSRNOG00000003150|mitochondrial pyruvate carrier 2 [Source:RGD Symbol%3BAcc:1563422]
rn6_v1_chr4_-_100380578_100380578	0.235218	Rfx3_Rfx1_Rfx4	ENSRNOT00000018251|Sh2d6|ENSRNOG00000013605|SH2 domain containing 6 [Source:RGD Symbol%3BAcc:1587427]
rn6_v1_chr2_+_181331464_181331464	0.23497	Rfx3_Rfx1_Rfx4	ENSRNOT00000017448|Map9|ENSRNOG00000012982|microtubule-associated protein 9 [Source:RGD Symbol%3BAcc:1560368]
rn6_v1_chr17_-_78910671_78910671	0.233421	Rfx3_Rfx1_Rfx4	ENSRNOT00000064609|Acbd7|ENSRNOG00000016480|acyl-CoA binding domain containing 7 [Source:RGD Symbol%3BAcc:1564164]
rn6_v1_chr10_+_38919167_38919167	0.231904	Rfx3_Rfx1_Rfx4	ENSRNOT00000077569|Kif3a|ENSRNOG00000007515|kinesin family member 3a [Source:RGD Symbol%3BAcc:621536]
rn6_v1_chr1_-_222495382_222495382	0.230282	Rfx3_Rfx1_Rfx4	ENSRNOT00000028759|Naa40|ENSRNOG00000021179|N(alpha)-acetyltransferase 40%2C NatD catalytic subunit [Source:RGD Symbol%3BAcc:1565838]
rn6_v1_chr10_-_56154548_56154548	0.229335	Rfx3_Rfx1_Rfx4	ENSRNOT00000090809|Dnah2|ENSRNOG00000052688|dynein%2C axonemal%2C heavy chain 2 [Source:RGD Symbol%3BAcc:1565087]
rn6_v1_chr8_+_67753279_67753279	0.227629	Rfx3_Rfx1_Rfx4	ENSRNOT00000009716|Calml4|ENSRNOG00000038202|calmodulin-like 4 [Source:RGD Symbol%3BAcc:1583918]
rn6_v1_chr1_+_213583606_213583606	0.226952	Rfx3_Rfx1_Rfx4	ENSRNOT00000088899|AC109844.1|ENSRNOG00000053259|
rn6_v1_chr19_+_37795658_37795658	0.226287	Rfx3_Rfx1_Rfx4	ENSRNOT00000025686|Tsnaxip1|ENSRNOG00000018954|translin-associated factor X interacting protein 1 [Source:RGD Symbol%3BAcc:1565341]
rn6_v1_chr4_+_147756553_147756695	0.226047	Rfx3_Rfx1_Rfx4	ENSRNOT00000086549|Ift122|ENSRNOG00000010952|intraflagellar transport 122 [Source:RGD Symbol%3BAcc:1311302]	ENSRNOT00000014733|Ift122|ENSRNOG00000010952|intraflagellar transport 122 [Source:RGD Symbol%3BAcc:1311302]
rn6_v1_chr5_-_136706936_136706998	0.22547	Rfx3_Rfx1_Rfx4	ENSRNOT00000081925|Ccdc24|ENSRNOG00000019586|coiled-coil domain containing 24 [Source:RGD Symbol%3BAcc:1562911]	ENSRNOT00000068130|Ccdc24|ENSRNOG00000019586|coiled-coil domain containing 24 [Source:RGD Symbol%3BAcc:1562911]
rn6_v1_chr5_+_159734838_159734838	0.222334	Rfx3_Rfx1_Rfx4	ENSRNOT00000079905|Rsg1|ENSRNOG00000023346|REM2 and RAB-like small GTPase 1 [Source:RGD Symbol%3BAcc:1561421]
rn6_v1_chr18_+_47740328_47740328	0.219126	Rfx3_Rfx1_Rfx4	ENSRNOT00000025119|Sncaip|ENSRNOG00000018254|synuclein%2C alpha interacting protein [Source:RGD Symbol%3BAcc:1309283]
rn6_v1_chr7_-_54855557_54855557	0.218784	Rfx3_Rfx1_Rfx4	ENSRNOT00000039475|Glipr1l1|ENSRNOG00000026634|GLI pathogenesis-related 1 like 1 [Source:RGD Symbol%3BAcc:1563000]
rn6_v1_chr16_-_39970532_39970532	0.216579	Rfx3_Rfx1_Rfx4	ENSRNOT00000071331|Spata4|ENSRNOG00000048035|spermatogenesis associated 4 [Source:RGD Symbol%3BAcc:1303065]
rn6_v1_chr9_-_13311924_13311924	0.216377	Rfx3_Rfx1_Rfx4	ENSRNOT00000015584|Kif6|ENSRNOG00000011453|kinesin family member 6 [Source:RGD Symbol%3BAcc:621070]
rn6_v1_chr3_-_15379381_15379381	0.214554	Rfx3_Rfx1_Rfx4	ENSRNOT00000084069|Ndufa8|ENSRNOG00000005668|NADH:ubiquinone oxidoreductase subunit A8 [Source:RGD Symbol%3BAcc:1306283]
rn6_v1_chr1_+_91042635_91042635	0.21262	Rfx3_Rfx1_Rfx4	ENSRNOT00000028211|LOC103690005|ENSRNOG00000020781|tubulin-folding cofactor B [Source:RGD Symbol%3BAcc:9365423]
rn6_v1_chr12_-_2007516_2007516	0.21154	Rfx3_Rfx1_Rfx4	ENSRNOT00000037564|Pex11g|ENSRNOG00000028100|peroxisomal biogenesis factor 11 gamma [Source:RGD Symbol%3BAcc:1307070]
rn6_v1_chr3_-_123718432_123718432	0.21058	Rfx3_Rfx1_Rfx4	ENSRNOT00000028861|Spef1|ENSRNOG00000021247|sperm flagellar 1 [Source:RGD Symbol%3BAcc:1311267]
rn6_v1_chr1_-_88162583_88162583	0.209723	Rfx3_Rfx1_Rfx4	ENSRNOT00000087411|Catsperg|ENSRNOG00000060693|cation channel sperm associated auxiliary subunit gamma [Source:RGD Symbol%3BAcc:1310942]
rn6_v1_chr2_-_89310946_89310946	0.209401	Rfx3_Rfx1_Rfx4	ENSRNOT00000015195|Ralyl|ENSRNOG00000011400|RALY RNA binding protein-like [Source:RGD Symbol%3BAcc:1305844]
rn6_v1_chr9_+_82718709_82718753	0.209244	Rfx3_Rfx1_Rfx4	ENSRNOT00000027256|Stk11ip|ENSRNOG00000020107|serine/threonine kinase 11 interacting protein [Source:RGD Symbol%3BAcc:1305046]	ENSRNOT00000080524|Stk11ip|ENSRNOG00000020107|serine/threonine kinase 11 interacting protein [Source:RGD Symbol%3BAcc:1305046]
rn6_v1_chr12_-_37425596_37425596	0.208622	Rfx3_Rfx1_Rfx4	ENSRNOT00000084553|Tctn2|ENSRNOG00000052704|tectonic family member 2 [Source:RGD Symbol%3BAcc:1591895]
rn6_v1_chr20_-_3299580_3299580	0.205376	Rfx3_Rfx1_Rfx4	ENSRNOT00000050373|Gnl1|ENSRNOG00000000798|G protein nucleolar 1 [Source:RGD Symbol%3BAcc:1303051]
rn6_v1_chr13_-_30800451_30800451	0.204981	Rfx3_Rfx1_Rfx4	ENSRNOT00000046791|Rpl21|ENSRNOG00000029410|ribosomal protein L21 [Source:RGD Symbol%3BAcc:68390]
rn6_v1_chr16_+_26859397_26859397	0.202674	Rfx3_Rfx1_Rfx4	ENSRNOT00000044171|Msmo1|ENSRNOG00000032297|methylsterol monooxygenase 1 [Source:RGD Symbol%3BAcc:620281]
rn6_v1_chr1_+_72874583_72874583	0.201933	Rfx3_Rfx1_Rfx4	ENSRNOT00000077719|Dnaaf3|ENSRNOG00000038600|dynein%2C axonemal%2C assembly factor 3 [Source:RGD Symbol%3BAcc:2323487]
rn6_v1_chr3_+_113251778_113251778	0.199326	Rfx3_Rfx1_Rfx4	ENSRNOT00000083005|Map1a|ENSRNOG00000014230|microtubule-associated protein 1A [Source:RGD Symbol%3BAcc:3042]
rn6_v1_chr8_-_107272122_107272122	0.197451	Rfx3_Rfx1_Rfx4	ENSRNOT00000041894|Cxadrl1|ENSRNOG00000029567|coxsackie virus and adenovirus receptor-like 1 [Source:RGD Symbol%3BAcc:735201]
rn6_v1_chr5_-_122642202_122642202	0.196379	Rfx3_Rfx1_Rfx4	ENSRNOT00000046691|Wdr78|ENSRNOG00000006999|WD repeat domain 78 [Source:RGD Symbol%3BAcc:1311027]
rn6_v1_chr7_-_120380200_120380200	0.194558	Rfx3_Rfx1_Rfx4	ENSRNOT00000014878|RGD1359634|ENSRNOG00000011170|similar to RIKEN cDNA 1700088E04 [Source:RGD Symbol%3BAcc:1359634]
rn6_v1_chr5_+_136406308_136406308	0.194021	Rfx3_Rfx1_Rfx4	ENSRNOT00000072492|Eri3|ENSRNOG00000019381|ERI1 exoribonuclease family member 3 [Source:RGD Symbol%3BAcc:1595859]
rn6_v1_chr19_+_10519493_10519493	0.193957	Rfx3_Rfx1_Rfx4	ENSRNOT00000030229|Ccdc102a|ENSRNOG00000025843|coiled-coil domain containing 102A [Source:RGD Symbol%3BAcc:1308684]
rn6_v1_chr13_-_90832469_90832469	0.192154	Rfx3_Rfx1_Rfx4	ENSRNOT00000086508|Igsf9|ENSRNOG00000008054|immunoglobulin superfamily%2C member 9 [Source:RGD Symbol%3BAcc:1304566]
rn6_v1_chr5_+_157165341_157165341	0.190551	Rfx3_Rfx1_Rfx4	ENSRNOT00000087072|Pla2g2c|ENSRNOG00000016647|phospholipase A2%2C group IIC [Source:RGD Symbol%3BAcc:3340]
rn6_v1_chr6_+_1534594_1534594	0.189871	Rfx3_Rfx1_Rfx4	ENSRNOT00000007000|Ndufaf7|ENSRNOG00000005279|NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:RGD Symbol%3BAcc:1311578]
rn6_v1_chr13_+_82574966_82574966	0.189728	Rfx3_Rfx1_Rfx4	ENSRNOT00000003844|Ccdc181|ENSRNOG00000002860|coiled-coil domain containing 181 [Source:RGD Symbol%3BAcc:1309708]
rn6_v1_chr1_+_220325352_220325352	0.189614	Rfx3_Rfx1_Rfx4	ENSRNOT00000027258|LOC108348098|ENSRNOG00000020117|breast cancer metastasis-suppressor 1 homolog [Source:RGD Symbol%3BAcc:11501278]
rn6_v1_chr6_+_145770662_145770662	0.187877	Rfx3_Rfx1_Rfx4	ENSRNOT00000088969|Cdca7l|ENSRNOG00000005410|cell division cycle associated 7 like [Source:RGD Symbol%3BAcc:1564080]
rn6_v1_chr9_+_10446699_10446699	0.187652	Rfx3_Rfx1_Rfx4	ENSRNOT00000075344|LOC301124|ENSRNOG00000046002|hypothetical LOC301124 [Source:RGD Symbol%3BAcc:1588578]
rn6_v1_chr3_-_147849875_147849875	0.186846	Rfx3_Rfx1_Rfx4	ENSRNOT00000081153|Nrsn2|ENSRNOG00000023935|neurensin 2 [Source:RGD Symbol%3BAcc:1586322]
rn6_v1_chr5_+_157165888_157165888	0.186437	Rfx3_Rfx1_Rfx4	ENSRNOT00000043029|Pla2g2c|ENSRNOG00000016647|phospholipase A2%2C group IIC [Source:RGD Symbol%3BAcc:3340]
rn6_v1_chr1_-_72674271_72674271	0.185808	Rfx3_Rfx1_Rfx4	ENSRNOT00000023744|Kmt5c|ENSRNOG00000017508|lysine methyltransferase 5C [Source:RGD Symbol%3BAcc:1305226]
rn6_v1_chr15_+_34584320_34584320	0.183368	Rfx3_Rfx1_Rfx4	ENSRNOT00000048255|AABR07017917.1|ENSRNOG00000039060|
rn6_v1_chr10_+_49472460_49472460	0.182963	Rfx3_Rfx1_Rfx4	ENSRNOT00000038276|Tekt3|ENSRNOG00000027212|tektin 3 [Source:RGD Symbol%3BAcc:1310582]
rn6_v1_chr3_+_110442637_110442637	0.182104	Rfx3_Rfx1_Rfx4	ENSRNOT00000010471|Pak6|ENSRNOG00000007925|p21 (RAC1) activated kinase 6 [Source:RGD Symbol%3BAcc:1306213]
rn6_v1_chr20_+_33945829_33945829	0.179994	Rfx3_Rfx1_Rfx4	ENSRNOT00000064063|LOC103689994|ENSRNOG00000047471|radial spoke head protein 4 homolog A [Source:RGD Symbol%3BAcc:9339057]
rn6_v1_chr2_+_189430041_189430083	0.179116	Rfx3_Rfx1_Rfx4	ENSRNOT00000023567|Tpm3|ENSRNOG00000017441|tropomyosin 3 [Source:RGD Symbol%3BAcc:621546]	ENSRNOT00000023605|Tpm3|ENSRNOG00000017441|tropomyosin 3 [Source:RGD Symbol%3BAcc:621546]
rn6_v1_chr11_-_64421248_64421248	0.178122	Rfx3_Rfx1_Rfx4	ENSRNOT00000066997|Igsf11|ENSRNOG00000001525|immunoglobulin superfamily%2C member 11 [Source:RGD Symbol%3BAcc:1308758]
rn6_v1_chr10_+_38918748_38918748	0.177893	Rfx3_Rfx1_Rfx4	ENSRNOT00000009999|Kif3a|ENSRNOG00000007515|kinesin family member 3a [Source:RGD Symbol%3BAcc:621536]
rn6_v1_chr1_+_100471066_100471066	0.176913	Rfx3_Rfx1_Rfx4	ENSRNOT00000067562|Aspdh|ENSRNOG00000019424|aspartate dehydrogenase domain containing [Source:RGD Symbol%3BAcc:1310111]
rn6_v1_chr1_+_203971152_203971152	0.175942	Rfx3_Rfx1_Rfx4	ENSRNOT00000075540|Gpr26|ENSRNOG00000047057|G protein-coupled receptor 26 [Source:RGD Symbol%3BAcc:619843]
rn6_v1_chr9_-_65917132_65917132	0.175671	Rfx3_Rfx1_Rfx4	ENSRNOT00000031866|Tmem237|ENSRNOG00000024085|transmembrane protein 237 [Source:RGD Symbol%3BAcc:1306705]
rn6_v1_chr20_-_46871946_46871946	0.175656	Rfx3_Rfx1_Rfx4	ENSRNOT00000031047|Armc2|ENSRNOG00000026217|armadillo repeat containing 2 [Source:RGD Symbol%3BAcc:1562413]
rn6_v1_chr16_+_49485256_49485256	0.175591	Rfx3_Rfx1_Rfx4	ENSRNOT00000059317|RGD1564308|ENSRNOG00000038819|similar to LOC495042 protein [Source:RGD Symbol%3BAcc:1564308]
rn6_v1_chr1_-_220786615_220786615	0.175316	Rfx3_Rfx1_Rfx4	ENSRNOT00000038198|Tsga10ip|ENSRNOG00000027564|testis specific 10 interacting protein [Source:RGD Symbol%3BAcc:1302964]
rn6_v1_chr20_+_32450733_32450733	0.174045	Rfx3_Rfx1_Rfx4	ENSRNOT00000036449|Rsph4a|ENSRNOG00000049696|radial spoke head 4 homolog A [Source:RGD Symbol%3BAcc:1307229]
rn6_v1_chr13_-_89661150_89661150	0.173642	Rfx3_Rfx1_Rfx4	ENSRNOT00000058390|Usp21|ENSRNOG00000038347|ubiquitin specific peptidase 21 [Source:RGD Symbol%3BAcc:1588822]
rn6_v1_chr11_-_53731779_53731779	0.173305	Rfx3_Rfx1_Rfx4	ENSRNOT00000002684|Ift57|ENSRNOG00000001958|intraflagellar transport 57 [Source:RGD Symbol%3BAcc:1305947]
rn6_v1_chr1_-_188572141_188572141	0.172139	Rfx3_Rfx1_Rfx4	ENSRNOT00000073003|Knop1|ENSRNOG00000046147|lysine-rich nucleolar protein 1 [Source:RGD Symbol%3BAcc:1565096]
rn6_v1_chr6_-_51356383_51356383	0.171917	Rfx3_Rfx1_Rfx4	ENSRNOT00000012415|Prkar2b|ENSRNOG00000009079|protein kinase cAMP-dependent type 2 regulatory subunit beta [Source:RGD Symbol%3BAcc:3394]
rn6_v1_chr4_+_183656013_183656013	0.17133	Rfx3_Rfx1_Rfx4	ENSRNOT00000055442|Etfbkmt|ENSRNOG00000036918|electron transfer flavoprotein beta subunit lysine methyltransferase [Source:RGD Symbol%3BAcc:735147]
rn6_v1_chr3_-_58181971_58181971	0.17083	Rfx3_Rfx1_Rfx4	ENSRNOT00000002076|Dlx2|ENSRNOG00000001519|distal-less homeobox 2 [Source:RGD Symbol%3BAcc:1304853]
rn6_v1_chr1_-_141604273_141604273	0.16886	Rfx3_Rfx1_Rfx4	ENSRNOT00000092125|Anpep|ENSRNOG00000014610|alanyl aminopeptidase%2C membrane [Source:RGD Symbol%3BAcc:2991]
rn6_v1_chr11_+_70967223_70967223	0.168594	Rfx3_Rfx1_Rfx4	ENSRNOT00000087633|Iqcg|ENSRNOG00000026420|IQ motif containing G [Source:RGD Symbol%3BAcc:1311606]
rn6_v1_chr5_+_136406130_136406130	0.168472	Rfx3_Rfx1_Rfx4	ENSRNOT00000093099|Eri3|ENSRNOG00000019381|ERI1 exoribonuclease family member 3 [Source:RGD Symbol%3BAcc:1595859]
rn6_v1_chr1_+_82473737_82473737	0.168366	Rfx3_Rfx1_Rfx4	ENSRNOT00000028029|B9d2|ENSRNOG00000028753|B9 protein domain 2 [Source:RGD Symbol%3BAcc:1566122]
rn6_v1_chr15_-_104168564_104168638	0.167634	Rfx3_Rfx1_Rfx4	ENSRNOT00000093385|Dzip1|ENSRNOG00000010311|DAZ interacting zinc finger protein 1 [Source:RGD Symbol%3BAcc:1307701]	ENSRNOT00000038596|Dzip1|ENSRNOG00000010311|DAZ interacting zinc finger protein 1 [Source:RGD Symbol%3BAcc:1307701]
rn6_v1_chr8_-_66893083_66893196	0.166144	Rfx3_Rfx1_Rfx4	ENSRNOT00000037028|Kif23|ENSRNOG00000014080|kinesin family member 23 [Source:RGD Symbol%3BAcc:1308596]	ENSRNOT00000091755|Kif23|ENSRNOG00000014080|kinesin family member 23 [Source:RGD Symbol%3BAcc:1308596]
rn6_v1_chr10_-_13352371_13352371	0.164053	Rfx3_Rfx1_Rfx4	ENSRNOT00000034340|Prss30|ENSRNOG00000033266|protease%2C serine%2C 30 [Source:RGD Symbol%3BAcc:735142]
rn6_v1_chr10_+_90085559_90085559	0.163523	Rfx3_Rfx1_Rfx4	ENSRNOT00000028332|Nags|ENSRNOG00000020879|N-acetylglutamate synthase [Source:RGD Symbol%3BAcc:1565783]
rn6_v1_chr12_+_31335372_31335425	0.163437	Rfx3_Rfx1_Rfx4	ENSRNOT00000001242|Stx2|ENSRNOG00000000936|syntaxin 2 [Source:RGD Symbol%3BAcc:2558]	ENSRNOT00000037296|Stx2|ENSRNOG00000000936|syntaxin 2 [Source:RGD Symbol%3BAcc:2558]
rn6_v1_chr1_+_144601410_144601410	0.1619	Rfx3_Rfx1_Rfx4	ENSRNOT00000047408|Efl1|ENSRNOG00000032723|elongation factor like GTPase 1 [Source:RGD Symbol%3BAcc:1306521]
rn6_v1_chr15_-_32888095_32888095	0.161373	Rfx3_Rfx1_Rfx4	ENSRNOT00000012233|Dad1|ENSRNOG00000009090|defender against cell death 1 [Source:RGD Symbol%3BAcc:621028]
rn6_v1_chrX_-_23469041_23469041	0.160673	Rfx3_Rfx1_Rfx4	ENSRNOT00000065789|LOC685699|ENSRNOG00000043358|hypothetical protein LOC685699 [Source:RGD Symbol%3BAcc:1591314]
rn6_v1_chr1_+_266952561_266952561	0.160613	Rfx3_Rfx1_Rfx4	ENSRNOT00000076452|Neurl1|ENSRNOG00000020339|neuralized E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1307021]
rn6_v1_chr11_+_61661724_61661724	0.159701	Rfx3_Rfx1_Rfx4	ENSRNOT00000079423|Zdhhc23|ENSRNOG00000060348|zinc finger%2C DHHC-type containing 23 [Source:RGD Symbol%3BAcc:1303254]
rn6_v1_chr17_-_9791781_9791781	0.159683	Rfx3_Rfx1_Rfx4	ENSRNOT00000090536|Rgs14|ENSRNOG00000015616|regulator of G-protein signaling 14 [Source:RGD Symbol%3BAcc:620003]
rn6_v1_chr17_-_9792007_9792007	0.159225	Rfx3_Rfx1_Rfx4	ENSRNOT00000021596|Rgs14|ENSRNOG00000015616|regulator of G-protein signaling 14 [Source:RGD Symbol%3BAcc:620003]
rn6_v1_chr5_+_166870011_166870011	0.158282	Rfx3_Rfx1_Rfx4	ENSRNOT00000088299|Rps2|ENSRNOG00000059428|ribosomal protein S2 [Source:RGD Symbol%3BAcc:619887]
rn6_v1_chr14_-_84393421_84393421	0.157529	Rfx3_Rfx1_Rfx4	ENSRNOT00000006911|Ccdc157|ENSRNOG00000005147|coiled-coil domain containing 157 [Source:RGD Symbol%3BAcc:1584653]
rn6_v1_chr4_-_123118186_123118186	0.157088	Rfx3_Rfx1_Rfx4	ENSRNOT00000038096|LOC100361898|ENSRNOG00000022466|coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:RGD Symbol%3BAcc:2319280]
rn6_v1_chr6_-_36940868_36940868	0.156468	Rfx3_Rfx1_Rfx4	ENSRNOT00000006470|Gen1|ENSRNOG00000004667|GEN1 Holliday junction 5' flap endonuclease [Source:RGD Symbol%3BAcc:1559792]
rn6_v1_chr9_-_82382272_82382272	0.156088	Rfx3_Rfx1_Rfx4	ENSRNOT00000025627|Abcb6|ENSRNOG00000018697|ATP-binding cassette%2C subfamily B (MDR/TAP)%2C member 6 [Source:RGD Symbol%3BAcc:71077]
rn6_v1_chr4_+_66165845_66165845	0.154824	Rfx3_Rfx1_Rfx4	ENSRNOT00000064175|Ubn2|ENSRNOG00000005564|ubinuclein 2 [Source:RGD Symbol%3BAcc:1310722]
rn6_v1_chr12_+_23544287_23544287	0.154091	Rfx3_Rfx1_Rfx4	ENSRNOT00000001938|Orai2|ENSRNOG00000001427|ORAI calcium release-activated calcium modulator 2 [Source:RGD Symbol%3BAcc:1310213]
rn6_v1_chr6_-_108076186_108076186	0.154083	Rfx3_Rfx1_Rfx4	ENSRNOT00000014814|Fam161b|ENSRNOG00000011112|family with sequence similarity 161%2C member B [Source:RGD Symbol%3BAcc:1309058]
rn6_v1_chr7_+_119647375_119647375	0.153349	Rfx3_Rfx1_Rfx4	ENSRNOT00000046563|Kctd17|ENSRNOG00000000231|potassium channel tetramerization domain containing 17 [Source:RGD Symbol%3BAcc:1311154]
rn6_v1_chr19_+_57614628_57614628	0.152443	Rfx3_Rfx1_Rfx4	ENSRNOT00000026617|Gnpat|ENSRNOG00000019205|glyceronephosphate O-acyltransferase [Source:RGD Symbol%3BAcc:620179]
rn6_v1_chr7_+_13013541_13013577	0.151771	Rfx3_Rfx1_Rfx4	ENSRNOT00000042792|Theg|ENSRNOG00000007960|theg spermatid protein [Source:RGD Symbol%3BAcc:1309240]	ENSRNOT00000010549|Theg|ENSRNOG00000007960|theg spermatid protein [Source:RGD Symbol%3BAcc:1309240]
rn6_v1_chr3_+_85544827_85544827	0.150842	Rfx3_Rfx1_Rfx4	ENSRNOT00000051901|AABR07052953.1|ENSRNOG00000045620|
rn6_v1_chr2_+_38120592_38120592	0.150626	Rfx3_Rfx1_Rfx4	ENSRNOT00000018527|Dimt1|ENSRNOG00000013596|DIM1 dimethyladenosine transferase 1 homolog [Source:RGD Symbol%3BAcc:1311752]
rn6_v1_chr10_-_31052102_31052102	0.150034	Rfx3_Rfx1_Rfx4	ENSRNOT00000007917|Thg1l|ENSRNOG00000005539|tRNA-histidine guanylyltransferase 1-like [Source:RGD Symbol%3BAcc:1359513]
rn6_v1_chr11_-_71601662_71601662	0.148262	Rfx3_Rfx1_Rfx4	ENSRNOT00000002397|Tctex1d2|ENSRNOG00000001758|Tctex1 domain containing 2 [Source:RGD Symbol%3BAcc:1563597]
rn6_v1_chr2_-_232373409_232373409	0.147851	Rfx3_Rfx1_Rfx4	ENSRNOT00000041479|AABR07013302.1|ENSRNOG00000055038|
rn6_v1_chr7_-_27240528_27240533	0.147758	Rfx3_Rfx1_Rfx4	ENSRNOT00000029435|Hsp90b1|ENSRNOG00000026963|heat shock protein 90 beta family member 1 [Source:RGD Symbol%3BAcc:1310482]	ENSRNOT00000079731|Hsp90b1|ENSRNOG00000026963|heat shock protein 90 beta family member 1 [Source:RGD Symbol%3BAcc:1310482]
rn6_v1_chr10_-_58784374_58784374	0.145505	Rfx3_Rfx1_Rfx4	ENSRNOT00000019919|Med31|ENSRNOG00000014618|mediator complex subunit 31 [Source:RGD Symbol%3BAcc:1309457]
rn6_v1_chr13_+_70157522_70157522	0.14491	Rfx3_Rfx1_Rfx4	ENSRNOT00000036906|Apobec4|ENSRNOG00000028089|apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 [Source:RGD Symbol%3BAcc:1560256]
rn6_v1_chr7_+_120891940_120891940	0.143816	Rfx3_Rfx1_Rfx4	ENSRNOT00000018787|Cby1|ENSRNOG00000013892|chibby family member 1%2C beta catenin antagonist [Source:RGD Symbol%3BAcc:708481]
rn6_v1_chr17_+_88095830_88095830	0.143208	Rfx3_Rfx1_Rfx4	ENSRNOT00000045984|Thnsl1|ENSRNOG00000033076|threonine synthase-like 1 [Source:RGD Symbol%3BAcc:1564213]
rn6_v1_chr1_-_185143272_185143272	0.142108	Rfx3_Rfx1_Rfx4	ENSRNOT00000027752|Nucb2|ENSRNOG00000020456|nucleobindin 2 [Source:RGD Symbol%3BAcc:620888]
rn6_v1_chr6_-_135259603_135259603	0.140957	Rfx3_Rfx1_Rfx4	ENSRNOT00000010529|Mok|ENSRNOG00000007850|MOK protein kinase [Source:RGD Symbol%3BAcc:1309274]
rn6_v1_chr3_-_96065711_96065711	0.140443	Rfx3_Rfx1_Rfx4	ENSRNOT00000006431|Dnajc24|ENSRNOG00000004842|DnaJ heat shock protein family (Hsp40) member C24 [Source:RGD Symbol%3BAcc:1564710]
rn6_v1_chr1_+_219345918_219345918	0.139462	Rfx3_Rfx1_Rfx4	ENSRNOT00000025018|Cdk2ap2|ENSRNOG00000018391|cyclin-dependent kinase 2 associated protein 2 [Source:RGD Symbol%3BAcc:1588883]
rn6_v1_chr16_+_69022792_69022792	0.139261	Rfx3_Rfx1_Rfx4	ENSRNOT00000035985|Got1l1|ENSRNOG00000038473|glutamic-oxaloacetic transaminase 1-like 1 [Source:RGD Symbol%3BAcc:1307172]
rn6_v1_chr16_+_21282467_21282467	0.137836	Rfx3_Rfx1_Rfx4	ENSRNOT00000065345|Yjefn3|ENSRNOG00000039191|YjeF N-terminal domain containing 3 [Source:RGD Symbol%3BAcc:1563236]
rn6_v1_chr20_-_44220702_44220702	0.137162	Rfx3_Rfx1_Rfx4	ENSRNOT00000036853|Fam229b|ENSRNOG00000024918|family with sequence similarity 229%2C member B [Source:RGD Symbol%3BAcc:2300149]
rn6_v1_chr4_+_62299044_62299044	0.136637	Rfx3_Rfx1_Rfx4	ENSRNOT00000032077|Agbl3|ENSRNOG00000010397|ATP/GTP binding protein-like 3 [Source:RGD Symbol%3BAcc:1561995]
rn6_v1_chr12_+_14092541_14092541	0.136164	Rfx3_Rfx1_Rfx4	ENSRNOT00000033998|Radil|ENSRNOG00000024456|Rap associating with DIL domain [Source:RGD Symbol%3BAcc:1306155]
rn6_v1_chr8_-_14156656_14156656	0.135904	Rfx3_Rfx1_Rfx4	ENSRNOT00000089364|Deup1|ENSRNOG00000061247|deuterosome assembly protein 1 [Source:RGD Symbol%3BAcc:1306632]
rn6_v1_chr3_+_72460889_72460889	0.135885	Rfx3_Rfx1_Rfx4	ENSRNOT00000012209|Tnks1bp1|ENSRNOG00000009195|tankyrase 1 binding protein 1 [Source:RGD Symbol%3BAcc:1312021]
rn6_v1_chr2_-_208225888_208225888	0.135356	Rfx3_Rfx1_Rfx4	ENSRNOT00000054860|AABR07012775.1|ENSRNOG00000053044|
rn6_v1_chr10_+_65805860_65805860	0.133822	Rfx3_Rfx1_Rfx4	ENSRNOT00000011795|Ift20|ENSRNOG00000008891|intraflagellar transport 20 [Source:RGD Symbol%3BAcc:1309400]
rn6_v1_chr5_-_160423811_160423811	0.133764	Rfx3_Rfx1_Rfx4	ENSRNOT00000018864|Efhd2|ENSRNOG00000013783|EF-hand domain family%2C member D2 [Source:RGD Symbol%3BAcc:1307585]
rn6_v1_chr8_-_68525911_68525924	0.133509	Rfx3_Rfx1_Rfx4	ENSRNOT00000080588|Iqch|ENSRNOG00000008353|IQ motif containing H [Source:RGD Symbol%3BAcc:1310670]	ENSRNOT00000011109|Iqch|ENSRNOG00000008353|IQ motif containing H [Source:RGD Symbol%3BAcc:1310670]
rn6_v1_chr18_-_28454756_28454756	0.132763	Rfx3_Rfx1_Rfx4	ENSRNOT00000040091|Spata24|ENSRNOG00000019976|spermatogenesis associated 24 [Source:RGD Symbol%3BAcc:1311742]
rn6_v1_chr9_+_27068443_27068443	0.132413	Rfx3_Rfx1_Rfx4	ENSRNOT00000017393|Efhc1|ENSRNOG00000042729|EF-hand domain containing 1 [Source:RGD Symbol%3BAcc:1587365]
rn6_v1_chr10_+_35279236_35279236	0.13057	Rfx3_Rfx1_Rfx4	ENSRNOT00000003770|Gfpt2|ENSRNOG00000002810|glutamine-fructose-6-phosphate transaminase 2 [Source:RGD Symbol%3BAcc:1303097]
rn6_v1_chr7_-_143473697_143473783	0.126428	Rfx3_Rfx1_Rfx4	ENSRNOT00000055336|Krt77|ENSRNOG00000036865|keratin 77 [Source:RGD Symbol%3BAcc:1302968]	ENSRNOT00000083027|Krt77|ENSRNOG00000036865|keratin 77 [Source:RGD Symbol%3BAcc:1302968]
rn6_v1_chr6_+_7900972_7901018	0.12602	Rfx3_Rfx1_Rfx4	ENSRNOT00000006953|Dync2li1|ENSRNOG00000005151|dynein cytoplasmic 2 light intermediate chain 1 [Source:RGD Symbol%3BAcc:1310286]	ENSRNOT00000068030|Dync2li1|ENSRNOG00000005151|dynein cytoplasmic 2 light intermediate chain 1 [Source:RGD Symbol%3BAcc:1310286]
rn6_v1_chr12_+_19314251_19314251	0.124433	Rfx3_Rfx1_Rfx4	ENSRNOT00000001827|Ap4m1|ENSRNOG00000001353|adaptor-related protein complex 4%2C mu 1 subunit [Source:RGD Symbol%3BAcc:1310233]
rn6_v1_chr8_+_127789048_127789048	0.123444	Rfx3_Rfx1_Rfx4	ENSRNOT00000052275|Dlec1|ENSRNOG00000032085|deleted in lung and esophageal cancer 1 [Source:RGD Symbol%3BAcc:1561649]
rn6_v1_chr16_-_32299542_32299542	0.123428	Rfx3_Rfx1_Rfx4	ENSRNOT00000072321|AABR07025299.1|ENSRNOG00000047664|
rn6_v1_chr5_+_57028467_57028467	0.1232	Rfx3_Rfx1_Rfx4	ENSRNOT00000010061|Dnaja1|ENSRNOG00000007029|DnaJ heat shock protein family (Hsp40) member A1 [Source:RGD Symbol%3BAcc:620942]
rn6_v1_chr13_-_90832138_90832138	0.120796	Rfx3_Rfx1_Rfx4	ENSRNOT00000010930|Igsf9|ENSRNOG00000008054|immunoglobulin superfamily%2C member 9 [Source:RGD Symbol%3BAcc:1304566]
rn6_v1_chr19_+_10024947_10024947	0.119249	Rfx3_Rfx1_Rfx4	ENSRNOT00000061392|Cfap20|ENSRNOG00000042179|cilia and flagella associated protein 20 [Source:RGD Symbol%3BAcc:1308493]
rn6_v1_chr5_-_138462864_138462864	0.118017	Rfx3_Rfx1_Rfx4	ENSRNOT00000011325|Ccdc30|ENSRNOG00000008560|coiled-coil domain containing 30 [Source:RGD Symbol%3BAcc:1305604]
rn6_v1_chr6_-_135304422_135304422	0.117724	Rfx3_Rfx1_Rfx4	ENSRNOT00000010598|Cinp|ENSRNOG00000008035|cyclin-dependent kinase 2-interacting protein [Source:RGD Symbol%3BAcc:1563395]
rn6_v1_chr5_-_153924896_153924896	0.11739	Rfx3_Rfx1_Rfx4	ENSRNOT00000065247|Grhl3|ENSRNOG00000029427|grainyhead-like transcription factor 3 [Source:RGD Symbol%3BAcc:1308320]
rn6_v1_chr3_-_58009514_58009514	0.116475	Rfx3_Rfx1_Rfx4	ENSRNOT00000048356|AABR07052498.1|ENSRNOG00000048003|
rn6_v1_chr8_-_5429581_5429581	0.116162	Rfx3_Rfx1_Rfx4	ENSRNOT00000044174|Dync2h1|ENSRNOG00000032070|dynein cytoplasmic 2 heavy chain 1 [Source:RGD Symbol%3BAcc:71042]
rn6_v1_chr15_+_18399515_18399515	0.115813	Rfx3_Rfx1_Rfx4	ENSRNOT00000071273|Fam107a|ENSRNOG00000033261|family with sequence similarity 107%2C member A [Source:RGD Symbol%3BAcc:1306327]
rn6_v1_chr8_+_116708027_116708027	0.115233	Rfx3_Rfx1_Rfx4	ENSRNOT00000047309|Actl11|ENSRNOG00000032642|actin-like 11 [Source:RGD Symbol%3BAcc:1310036]
rn6_v1_chr19_-_9931930_9931930	0.115027	Rfx3_Rfx1_Rfx4	ENSRNOT00000085144|Ccdc113|ENSRNOG00000051510|coiled-coil domain containing 113 [Source:RGD Symbol%3BAcc:1565763]
rn6_v1_chr14_-_92577936_92577936	0.113856	Rfx3_Rfx1_Rfx4	ENSRNOT00000086154|Cobl|ENSRNOG00000004281|cordon-bleu WH2 repeat protein [Source:RGD Symbol%3BAcc:1312002]
rn6_v1_chr6_+_42852683_42852683	0.112829	Rfx3_Rfx1_Rfx4	ENSRNOT00000079185|Odc1|ENSRNOG00000005424|ornithine decarboxylase 1 [Source:RGD Symbol%3BAcc:3227]
rn6_v1_chr15_+_18399733_18399733	0.112423	Rfx3_Rfx1_Rfx4	ENSRNOT00000061158|Fam107a|ENSRNOG00000033261|family with sequence similarity 107%2C member A [Source:RGD Symbol%3BAcc:1306327]
rn6_v1_chr13_+_70174936_70175136	0.111896	Rfx3_Rfx1_Rfx4	ENSRNOT00000064068|Arpc5|ENSRNOG00000028062|actin related protein 2/3 complex%2C subunit 5 [Source:RGD Symbol%3BAcc:1311791]	ENSRNOT00000079861|Arpc5|ENSRNOG00000028062|actin related protein 2/3 complex%2C subunit 5 [Source:RGD Symbol%3BAcc:1311791]	ENSRNOT00000092562|Arpc5|ENSRNOG00000028062|actin related protein 2/3 complex%2C subunit 5 [Source:RGD Symbol%3BAcc:1311791]
rn6_v1_chr9_-_15214596_15214596	0.111699	Rfx3_Rfx1_Rfx4	ENSRNOT00000039102|Tfeb|ENSRNOG00000014666|transcription factor EB [Source:RGD Symbol%3BAcc:1309583]
rn6_v1_chr3_-_113231790_113231790	0.111678	Rfx3_Rfx1_Rfx4	ENSRNOT00000019025|Tp53bp1|ENSRNOG00000013837|tumor protein p53 binding protein 1 [Source:RGD Symbol%3BAcc:1308039]
rn6_v1_chr8_-_14157141_14157141	0.111558	Rfx3_Rfx1_Rfx4	ENSRNOT00000079034|Deup1|ENSRNOG00000061247|deuterosome assembly protein 1 [Source:RGD Symbol%3BAcc:1306632]
rn6_v1_chr7_+_12433933_12433933	0.111131	Rfx3_Rfx1_Rfx4	ENSRNOT00000060690|Cbarp|ENSRNOG00000024349|CACN beta subunit associated regulatory protein [Source:RGD Symbol%3BAcc:1307185]
rn6_v1_chr11_+_83855753_83855753	0.110791	Rfx3_Rfx1_Rfx4	ENSRNOT00000030686|RGD1563956|ENSRNOG00000025014|similar to 60S ribosomal protein L12 [Source:RGD Symbol%3BAcc:1563956]
rn6_v1_chr5_-_160555083_160555083	0.110294	Rfx3_Rfx1_Rfx4	ENSRNOT00000018953|Fhad1|ENSRNOG00000028064|forkhead associated phosphopeptide binding domain 1 [Source:RGD Symbol%3BAcc:1563444]
rn6_v1_chr2_-_52492509_52492509	0.110242	Rfx3_Rfx1_Rfx4	ENSRNOT00000021964|Nim1k|ENSRNOG00000016353|NIM1 serine/threonine protein kinase [Source:RGD Symbol%3BAcc:1308116]
rn6_v1_chr1_+_190681094_190681094	0.108191	Rfx3_Rfx1_Rfx4	ENSRNOT00000036175|Vwa3a|ENSRNOG00000025110|von Willebrand factor A domain containing 3A [Source:RGD Symbol%3BAcc:1311670]
rn6_v1_chr8_-_115388266_115388266	0.108061	Rfx3_Rfx1_Rfx4	ENSRNOT00000018122|Tex264|ENSRNOG00000013201|testis expressed 264 [Source:RGD Symbol%3BAcc:1359353]
rn6_v1_chr1_-_142720257_142720257	0.107606	Rfx3_Rfx1_Rfx4	ENSRNOT00000032294|Wdr73|ENSRNOG00000010664|WD repeat domain 73 [Source:RGD Symbol%3BAcc:1306429]
rn6_v1_chr2_-_210873024_210873024	0.106819	Rfx3_Rfx1_Rfx4	ENSRNOT00000026051|Ampd2|ENSRNOG00000019240|adenosine monophosphate deaminase 2 [Source:RGD Symbol%3BAcc:2110]
rn6_v1_chr2_+_206454208_206454208	0.106411	Rfx3_Rfx1_Rfx4	ENSRNOT00000026863|Phtf1|ENSRNOG00000019785|putative homeodomain transcription factor 1 [Source:RGD Symbol%3BAcc:620426]
rn6_v1_chr9_+_44003322_44003322	0.106307	Rfx3_Rfx1_Rfx4	ENSRNOT00000051584|AC133270.1|ENSRNOG00000031651|
rn6_v1_chr6_+_108076306_108076306	0.104749	Rfx3_Rfx1_Rfx4	ENSRNOT00000014913|Coq6|ENSRNOG00000011164|coenzyme Q6 monooxygenase [Source:RGD Symbol%3BAcc:1311149]
rn6_v1_chr7_+_28412198_28412220	0.104599	Rfx3_Rfx1_Rfx4	ENSRNOT00000081822|Igf1|ENSRNOG00000004517|insulin-like growth factor 1 [Source:RGD Symbol%3BAcc:2868]	ENSRNOT00000038780|Igf1|ENSRNOG00000004517|insulin-like growth factor 1 [Source:RGD Symbol%3BAcc:2868]	ENSRNOT00000005995|Igf1|ENSRNOG00000004517|insulin-like growth factor 1 [Source:RGD Symbol%3BAcc:2868]
rn6_v1_chr18_-_14016713_14016713	0.104528	Rfx3_Rfx1_Rfx4	ENSRNOT00000041125|Nol4|ENSRNOG00000014775|nucleolar protein 4 [Source:RGD Symbol%3BAcc:1310663]
rn6_v1_chr8_+_48571323_48571323	0.102785	Rfx3_Rfx1_Rfx4	ENSRNOT00000059776|Ccdc153|ENSRNOG00000039086|coiled-coil domain containing 153 [Source:RGD Symbol%3BAcc:1305351]
rn6_v1_chr3_+_164665532_164665532	0.10255	Rfx3_Rfx1_Rfx4	ENSRNOT00000014309|Ptpn1|ENSRNOG00000010574|protein tyrosine phosphatase%2C non-receptor type 1 [Source:RGD Symbol%3BAcc:61965]
rn6_v1_chr11_+_82415995_82415995	0.101689	Rfx3_Rfx1_Rfx4	ENSRNOT00000051772|AABR07034641.1|ENSRNOG00000033115|
rn6_v1_chr5_-_78267063_78267063	0.100532	Rfx3_Rfx1_Rfx4	ENSRNOT00000040894|Cdc26|ENSRNOG00000029785|cell division cycle 26 [Source:RGD Symbol%3BAcc:1311342]	ENSRNOT00000087648|Cdc26|ENSRNOG00000029785|cell division cycle 26 [Source:RGD Symbol%3BAcc:1311342]
rn6_v1_chr3_-_45210474_45210474	0.100292	Rfx3_Rfx1_Rfx4	ENSRNOT00000091777|Ccdc148|ENSRNOG00000057740|coiled-coil domain containing 148 [Source:RGD Symbol%3BAcc:1561169]
rn6_v1_chr5_-_118541928_118541928	0.0994541	Rfx3_Rfx1_Rfx4	ENSRNOT00000012947|Itgb3bp|ENSRNOG00000009116|integrin subunit beta 3 binding protein [Source:RGD Symbol%3BAcc:1310044]
rn6_v1_chr4_-_113988246_113988246	0.0992724	Rfx3_Rfx1_Rfx4	ENSRNOT00000013128|LOC103692166|ENSRNOG00000009324|WD repeat-containing protein 54 [Source:RGD Symbol%3BAcc:9477816]
rn6_v1_chr1_-_71400388_71400388	0.099233	Rfx3_Rfx1_Rfx4	ENSRNOT00000090327|Zfp444|ENSRNOG00000015517|zinc finger protein 444 [Source:RGD Symbol%3BAcc:1304847]
rn6_v1_chr1_-_220096319_220096404	0.0991656	Rfx3_Rfx1_Rfx4	ENSRNOT00000091787|Ccs|ENSRNOG00000047816|copper chaperone for superoxide dismutase [Source:RGD Symbol%3BAcc:620403]	ENSRNOT00000073983|Ccs|ENSRNOG00000047816|copper chaperone for superoxide dismutase [Source:RGD Symbol%3BAcc:620403]
rn6_v1_chr2_-_30780121_30780121	0.0977999	Rfx3_Rfx1_Rfx4	ENSRNOT00000025129|Cenph|ENSRNOG00000018615|centromere protein H [Source:RGD Symbol%3BAcc:1583506]
rn6_v1_chr16_-_20562399_20562399	0.0976713	Rfx3_Rfx1_Rfx4	ENSRNOT00000031692|Lrrc25|ENSRNOG00000022565|leucine rich repeat containing 25 [Source:RGD Symbol%3BAcc:1564818]
rn6_v1_chr1_+_100755682_100755682	0.0967485	Rfx3_Rfx1_Rfx4	ENSRNOT00000035748|Vrk3|ENSRNOG00000026517|vaccinia related kinase 3 [Source:RGD Symbol%3BAcc:1549692]
rn6_v1_chr2_-_27949066_27949089	0.0962205	Rfx3_Rfx1_Rfx4	ENSRNOT00000081472|Nsa2|ENSRNOG00000016530|NSA2 ribosome biogenesis homolog [Source:RGD Symbol%3BAcc:621335]	ENSRNOT00000022138|Nsa2|ENSRNOG00000016530|NSA2 ribosome biogenesis homolog [Source:RGD Symbol%3BAcc:621335]
rn6_v1_chr7_+_3320103_3320103	0.0958004	Rfx3_Rfx1_Rfx4	ENSRNOT00000090381|Cd63|ENSRNOG00000007650|Cd63 molecule [Source:RGD Symbol%3BAcc:62080]
rn6_v1_chr7_+_120380544_120380544	0.0950933	Rfx3_Rfx1_Rfx4	ENSRNOT00000015009|Polr2f|ENSRNOG00000011214|RNA polymerase II subunit F [Source:RGD Symbol%3BAcc:708567]
rn6_v1_chr15_-_60766579_60766579	0.0948641	Rfx3_Rfx1_Rfx4	ENSRNOT00000079978|Akap11|ENSRNOG00000009987|A-kinase anchoring protein 11 [Source:RGD Symbol%3BAcc:2079]
rn6_v1_chr12_-_22811058_22811058	0.0944928	Rfx3_Rfx1_Rfx4	ENSRNOT00000046412|Ift22|ENSRNOG00000031346|intraflagellar transport 22 [Source:RGD Symbol%3BAcc:1305370]
rn6_v1_chr3_-_62803373_62803373	0.0944038	Rfx3_Rfx1_Rfx4	ENSRNOT00000013565|Ttc30a1|ENSRNOG00000052519|tetratricopeptide repeat domain 30A1 [Source:RGD Symbol%3BAcc:1560121]
rn6_v1_chr8_-_55408464_55408464	0.0940731	Rfx3_Rfx1_Rfx4	ENSRNOT00000066893|Sik2|ENSRNOG00000043498|salt-inducible kinase 2 [Source:RGD Symbol%3BAcc:1559698]
rn6_v1_chr14_-_6587141_6587141	0.0926378	Rfx3_Rfx1_Rfx4	ENSRNOT00000061664|LOC679894|ENSRNOG00000042340|similar to THO complex subunit 2 (Tho2) [Source:RGD Symbol%3BAcc:1583596]
rn6_v1_chr6_+_36941233_36941233	0.092626	Rfx3_Rfx1_Rfx4	ENSRNOT00000007073|Smc6|ENSRNOG00000004908|structural maintenance of chromosomes 6 [Source:RGD Symbol%3BAcc:1311214]
rn6_v1_chr1_-_78626284_78626284	0.0918161	Rfx3_Rfx1_Rfx4	ENSRNOT00000052299|LOC108349752|ENSRNOG00000028617|carcinoembryonic antigen-related cell adhesion molecule 3-like [Source:RGD Symbol%3BAcc:11382285]
rn6_v1_chr2_-_118882562_118882562	0.0914005	Rfx3_Rfx1_Rfx4	ENSRNOT00000058860|Kcnmb3|ENSRNOG00000027836|potassium calcium-activated channel subfamily M regulatory beta subunit 3 [Source:RGD Symbol%3BAcc:1311852]
rn6_v1_chr20_-_6251634_6251634	0.0899	Rfx3_Rfx1_Rfx4	ENSRNOT00000059194|Stk38|ENSRNOG00000000519|serine/threonine kinase 38 [Source:RGD Symbol%3BAcc:1309455]
rn6_v1_chr20_+_46215379_46215379	0.0894342	Rfx3_Rfx1_Rfx4	ENSRNOT00000066634|Ppil6|ENSRNOG00000043186|peptidylprolyl isomerase like 6 [Source:RGD Symbol%3BAcc:1592581]	ENSRNOT00000068693|Ppil6|ENSRNOG00000043186|peptidylprolyl isomerase like 6 [Source:RGD Symbol%3BAcc:1592581]
rn6_v1_chr7_+_41475163_41475163	0.0893918	Rfx3_Rfx1_Rfx4	ENSRNOT00000037844|Dusp6|ENSRNOG00000023896|dual specificity phosphatase 6 [Source:RGD Symbol%3BAcc:70978]
rn6_v1_chr20_-_3815834_3815834	0.0885035	Rfx3_Rfx1_Rfx4	ENSRNOT00000000543|Ring1|ENSRNOG00000000467|ring finger protein 1 [Source:RGD Symbol%3BAcc:3576]
rn6_v1_chr10_-_109639054_109639054	0.0881395	Rfx3_Rfx1_Rfx4	ENSRNOT00000071433|Arl16|ENSRNOG00000049235|ADP-ribosylation factor like GTPase 16 [Source:RGD Symbol%3BAcc:1590059]
rn6_v1_chr3_-_79728879_79728879	0.0879837	Rfx3_Rfx1_Rfx4	ENSRNOT00000012425|Ndufs3|ENSRNOG00000009155|NADH dehydrogenase (ubiquinone) Fe-S protein 3 [Source:RGD Symbol%3BAcc:1309406]
rn6_v1_chr9_-_66627007_66627007	0.0868622	Rfx3_Rfx1_Rfx4	ENSRNOT00000049571|AABR07067829.1|ENSRNOG00000046349|
rn6_v1_chrX_-_13601069_13601069	0.086768	Rfx3_Rfx1_Rfx4	ENSRNOT00000004686|Otc|ENSRNOG00000003370|ornithine carbamoyltransferase [Source:RGD Symbol%3BAcc:3236]
rn6_v1_chr20_+_4369178_4369178	0.0866962	Rfx3_Rfx1_Rfx4	ENSRNOT00000088079|Agpat1|ENSRNOG00000000437|1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:RGD Symbol%3BAcc:1303287]
rn6_v1_chr3_+_67538289_67538289	0.0863595	Rfx3_Rfx1_Rfx4	ENSRNOT00000009839|Dnajc10|ENSRNOG00000006803|DnaJ heat shock protein family (Hsp40) member C10 [Source:RGD Symbol%3BAcc:1307813]
rn6_v1_chr17_+_6701315_6701420	0.0863075	Rfx3_Rfx1_Rfx4	ENSRNOT00000026054|Kif27|ENSRNOG00000019257|kinesin family member 27 [Source:RGD Symbol%3BAcc:621071]	ENSRNOT00000080683|Kif27|ENSRNOG00000019257|kinesin family member 27 [Source:RGD Symbol%3BAcc:621071]
rn6_v1_chrX_-_20359945_20359945	0.0862293	Rfx3_Rfx1_Rfx4	ENSRNOT00000049138|AABR07037412.1|ENSRNOG00000030999|
rn6_v1_chr16_-_69280109_69280109	0.086187	Rfx3_Rfx1_Rfx4	ENSRNOT00000058595|AABR07026240.1|ENSRNOG00000038458|
rn6_v1_chr1_-_222177421_222177421	0.0838033	Rfx3_Rfx1_Rfx4	ENSRNOT00000078393|Esrra|ENSRNOG00000021139|estrogen related receptor%2C alpha [Source:RGD Symbol%3BAcc:1583866]
rn6_v1_chr5_+_152333043_152333043	0.0832503	Rfx3_Rfx1_Rfx4	ENSRNOT00000021342|Ubxn11|ENSRNOG00000015476|UBX domain protein 11 [Source:RGD Symbol%3BAcc:620769]
rn6_v1_chr2_-_203680083_203680083	0.082414	Rfx3_Rfx1_Rfx4	ENSRNOT00000021268|Cd2|ENSRNOG00000015821|Cd2 molecule [Source:RGD Symbol%3BAcc:2297]
rn6_v1_chr3_+_101156212_101156212	0.081627	Rfx3_Rfx1_Rfx4	ENSRNOT00000065333|Ccdc34|ENSRNOG00000005902|coiled-coil domain containing 34 [Source:RGD Symbol%3BAcc:1560583]
rn6_v1_chr13_-_110077946_110077946	0.0810289	Rfx3_Rfx1_Rfx4	ENSRNOT00000000078|Ppp2r5a|ENSRNOG00000000068|protein phosphatase 2%2C regulatory subunit B'%2C alpha [Source:RGD Symbol%3BAcc:1308022]
rn6_v1_chr14_-_77492910_77492910	0.0809265	Rfx3_Rfx1_Rfx4	ENSRNOT00000008410|Stx18|ENSRNOG00000006139|syntaxin 18 [Source:RGD Symbol%3BAcc:1310058]
rn6_v1_chr14_-_86190659_86190659	0.0808603	Rfx3_Rfx1_Rfx4	ENSRNOT00000086474|Gck|ENSRNOG00000061527|glucokinase [Source:RGD Symbol%3BAcc:2670]
rn6_v1_chr16_+_7082450_7082450	0.0807473	Rfx3_Rfx1_Rfx4	ENSRNOT00000013291|Glt8d1|ENSRNOG00000018179|glycosyltransferase 8 domain containing 1 [Source:RGD Symbol%3BAcc:1359293]
rn6_v1_chr5_-_173098816_173098816	0.0804936	Rfx3_Rfx1_Rfx4	ENSRNOT00000023696|Mib2|ENSRNOG00000017564|mindbomb E3 ubiquitin protein ligase 2 [Source:RGD Symbol%3BAcc:1359469]
rn6_v1_chr12_+_22727335_22727335	0.0792967	Rfx3_Rfx1_Rfx4	ENSRNOT00000077293|Znhit1|ENSRNOG00000001418|zinc finger%2C HIT-type containing 1 [Source:RGD Symbol%3BAcc:2322870]
rn6_v1_chr8_+_32604365_32604365	0.0790517	Rfx3_Rfx1_Rfx4	ENSRNOT00000071210|AABR07069587.1|ENSRNOG00000050165|
rn6_v1_chr8_-_23014499_23014499	0.0784039	Rfx3_Rfx1_Rfx4	ENSRNOT00000017820|Ccdc151|ENSRNOG00000013263|coiled-coil domain containing 151 [Source:RGD Symbol%3BAcc:1310048]
rn6_v1_chr20_-_4390436_4390579	0.0782472	Rfx3_Rfx1_Rfx4	ENSRNOT00000000497|Ppt2|ENSRNOG00000000435|palmitoyl-protein thioesterase 2 [Source:RGD Symbol%3BAcc:620375]	ENSRNOT00000077655|Ppt2|ENSRNOG00000000435|palmitoyl-protein thioesterase 2 [Source:RGD Symbol%3BAcc:620375]
rn6_v1_chr8_-_71050853_71050853	0.0777839	Rfx3_Rfx1_Rfx4	ENSRNOT00000073571|Ankdd1a|ENSRNOG00000015554|ankyrin repeat and death domain containing 1A [Source:RGD Symbol%3BAcc:1586052]
rn6_v1_chr16_-_81822716_81822716	0.0776654	Rfx3_Rfx1_Rfx4	ENSRNOT00000026677|F10|ENSRNOG00000033444|coagulation factor X [Source:RGD Symbol%3BAcc:61850]
rn6_v1_chr14_-_92117923_92117923	0.0772018	Rfx3_Rfx1_Rfx4	ENSRNOT00000044726|Grb10|ENSRNOG00000004290|growth factor receptor bound protein 10 [Source:RGD Symbol%3BAcc:1566234]
rn6_v1_chr18_+_24397369_24397369	0.0770173	Rfx3_Rfx1_Rfx4	ENSRNOT00000022761|Sap130|ENSRNOG00000016773|Sin3A associated protein 130 [Source:RGD Symbol%3BAcc:1311657]
rn6_v1_chr20_-_14620019_14620019	0.0769741	Rfx3_Rfx1_Rfx4	ENSRNOT00000001779|Gnaz|ENSRNOG00000001313|G protein subunit alpha z [Source:RGD Symbol%3BAcc:2717]
rn6_v1_chrX_+_15378789_15378789	0.0765803	Rfx3_Rfx1_Rfx4	ENSRNOT00000029272|Gata1|ENSRNOG00000025534|GATA binding protein 1 [Source:RGD Symbol%3BAcc:2663]
rn6_v1_chr7_+_14891001_14891001	0.0763694	Rfx3_Rfx1_Rfx4	ENSRNOT00000041034|Cyp4f4|ENSRNOG00000032895|cytochrome P450%2C family 4%2C subfamily f%2C polypeptide 4 [Source:RGD Symbol%3BAcc:708363]
rn6_v1_chr11_-_87434482_87434482	0.0762561	Rfx3_Rfx1_Rfx4	ENSRNOT00000074346|Lrrc74b|ENSRNOG00000001872|leucine rich repeat containing 74B [Source:RGD Symbol%3BAcc:2319134]	ENSRNOT00000002557|Lrrc74b|ENSRNOG00000001872|leucine rich repeat containing 74B [Source:RGD Symbol%3BAcc:2319134]
rn6_v1_chr1_+_78671121_78671121	0.0761363	Rfx3_Rfx1_Rfx4	ENSRNOT00000021310|Ap2s1|ENSRNOG00000015865|adaptor-related protein complex 2%2C sigma 1 subunit [Source:RGD Symbol%3BAcc:620188]
rn6_v1_chr1_+_72732668_72732668	0.075838	Rfx3_Rfx1_Rfx4	ENSRNOT00000024251|Hspbp1|ENSRNOG00000017795|HSPA (heat shock 70) binding protein%2C cytoplasmic cochaperone 1 [Source:RGD Symbol%3BAcc:628677]
rn6_v1_chr10_-_88533171_88533171	0.0757252	Rfx3_Rfx1_Rfx4	ENSRNOT00000024321|Dnajc7|ENSRNOG00000017781|DnaJ heat shock protein family (Hsp40) member C7 [Source:RGD Symbol%3BAcc:1303226]
rn6_v1_chr10_-_10808585_10808585	0.0749102	Rfx3_Rfx1_Rfx4	ENSRNOT00000036954|LOC360479|ENSRNOG00000028075|similar to hypothetical protein [Source:RGD Symbol%3BAcc:1359596]
rn6_v1_chr1_-_64446818_64446818	0.074272	Rfx3_Rfx1_Rfx4	ENSRNOT00000081980|Myadm|ENSRNOG00000053450|myeloid-associated differentiation marker [Source:RGD Symbol%3BAcc:727835]
rn6_v1_chr9_+_30939555_30939555	0.073847	Rfx3_Rfx1_Rfx4	ENSRNOT00000016887|Lmbrd1|ENSRNOG00000012178|LMBR1 domain containing 1 [Source:RGD Symbol%3BAcc:708471]
rn6_v1_chr10_-_85709568_85709568	0.0735112	Rfx3_Rfx1_Rfx4	ENSRNOT00000005426|Cwc25|ENSRNOG00000004091|CWC25 spliceosome-associated protein homolog [Source:RGD Symbol%3BAcc:1305258]
rn6_v1_chr17_-_74679696_74679696	0.07349	Rfx3_Rfx1_Rfx4	ENSRNOT00000048420|AABR07028558.1|ENSRNOG00000048518|
rn6_v1_chr7_+_140248852_140248852	0.0734239	Rfx3_Rfx1_Rfx4	ENSRNOT00000087338|RGD1305928|ENSRNOG00000057264|hypothetical LOC300207 [Source:RGD Symbol%3BAcc:1305928]
rn6_v1_chr20_+_3553455_3553455	0.073398	Rfx3_Rfx1_Rfx4	ENSRNOT00000090080|Ddr1|ENSRNOG00000057125|discoidin domain receptor tyrosine kinase 1 [Source:RGD Symbol%3BAcc:2252]
rn6_v1_chr10_+_1406486_1406486	0.0729809	Rfx3_Rfx1_Rfx4	ENSRNOT00000078773|LOC679822|ENSRNOG00000061035|similar to dynein%2C cytoplasmic%2C light peptide [Source:RGD Symbol%3BAcc:1583666]
rn6_v1_chr4_+_85427555_85427555	0.0729714	Rfx3_Rfx1_Rfx4	ENSRNOT00000015469|Fam188b|ENSRNOG00000011530|family with sequence similarity 188%2C member B [Source:RGD Symbol%3BAcc:1562590]
rn6_v1_chr9_+_17911944_17911944	0.0728727	Rfx3_Rfx1_Rfx4	ENSRNOT00000080940|Spats1|ENSRNOG00000019963|spermatogenesis associated%2C serine-rich 1 [Source:RGD Symbol%3BAcc:631367]
rn6_v1_chr11_+_87549059_87549059	0.0728375	Rfx3_Rfx1_Rfx4	ENSRNOT00000002567|Ccdc74a|ENSRNOG00000001876|coiled-coil domain containing 74A [Source:RGD Symbol%3BAcc:1588214]
rn6_v1_chr4_+_145413230_145413230	0.0727259	Rfx3_Rfx1_Rfx4	ENSRNOT00000056508|Il17re|ENSRNOG00000009204|interleukin 17 receptor E [Source:RGD Symbol%3BAcc:735148]
rn6_v1_chr20_-_4368693_4368693	0.0726977	Rfx3_Rfx1_Rfx4	ENSRNOT00000000501|Rnf5|ENSRNOG00000000438|ring finger protein 5 [Source:RGD Symbol%3BAcc:1588458]
rn6_v1_chr10_+_86763117_86763117	0.0726798	Rfx3_Rfx1_Rfx4	ENSRNOT00000030425|Rapgefl1|ENSRNOG00000027871|Rap guanine nucleotide exchange factor like 1 [Source:RGD Symbol%3BAcc:1563269]
rn6_v1_chr10_+_90192627_90192629	0.0721892	Rfx3_Rfx1_Rfx4	ENSRNOT00000080965|LOC303566|ENSRNOG00000020908|E2F1-inducible gene [Source:RGD Symbol%3BAcc:1305385]	ENSRNOT00000065182|LOC303566|ENSRNOG00000020908|E2F1-inducible gene [Source:RGD Symbol%3BAcc:1305385]
rn6_v1_chr7_+_12941994_12941994	0.071751	Rfx3_Rfx1_Rfx4	ENSRNOT00000010832|Odf3l2|ENSRNOG00000008199|outer dense fiber of sperm tails 3-like 2 [Source:RGD Symbol%3BAcc:1310260]
rn6_v1_chr6_+_132246602_132246602	0.0717175	Rfx3_Rfx1_Rfx4	ENSRNOT00000009896|Cyp46a1|ENSRNOG00000007147|cytochrome P450%2C family 46%2C subfamily a%2C polypeptide 1 [Source:RGD Symbol%3BAcc:1306605]
rn6_v1_chr9_+_98621506_98621610	0.0712462	Rfx3_Rfx1_Rfx4	ENSRNOT00000056612|Traf3ip1|ENSRNOG00000024468|TRAF3 interacting protein 1 [Source:RGD Symbol%3BAcc:1309252]	ENSRNOT00000081992|Traf3ip1|ENSRNOG00000024468|TRAF3 interacting protein 1 [Source:RGD Symbol%3BAcc:1309252]
rn6_v1_chr1_+_79898551_79898551	0.0686457	Rfx3_Rfx1_Rfx4	ENSRNOT00000019069|Mypop|ENSRNOG00000014132|Myb-related transcription factor%2C partner of profilin [Source:RGD Symbol%3BAcc:1565160]
rn6_v1_chr10_-_65805693_65805693	0.0684955	Rfx3_Rfx1_Rfx4	ENSRNOT00000012245|Tnfaip1|ENSRNOG00000009069|TNF alpha induced protein 1 [Source:RGD Symbol%3BAcc:3877]
rn6_v1_chr8_-_111984572_111984572	0.0683722	Rfx3_Rfx1_Rfx4	ENSRNOT00000014519|Tmem108|ENSRNOG00000010911|transmembrane protein 108 [Source:RGD Symbol%3BAcc:1311530]
rn6_v1_chr10_+_49020454_49020512	0.0681287	Rfx3_Rfx1_Rfx4	ENSRNOT00000003402|LOC108348055|ENSRNOG00000002462|B9 domain-containing protein 1 [Source:RGD Symbol%3BAcc:11475921]	ENSRNOT00000067379|LOC108348055|ENSRNOG00000002462|B9 domain-containing protein 1 [Source:RGD Symbol%3BAcc:11475921]
rn6_v1_chr7_+_25919867_25919871	0.0680679	Rfx3_Rfx1_Rfx4	ENSRNOT00000009625|Ric8b|ENSRNOG00000007323|RIC8 guanine nucleotide exchange factor B [Source:RGD Symbol%3BAcc:631419]	ENSRNOT00000090153|Ric8b|ENSRNOG00000007323|RIC8 guanine nucleotide exchange factor B [Source:RGD Symbol%3BAcc:631419]
rn6_v1_chr7_+_11521998_11521998	0.0673336	Rfx3_Rfx1_Rfx4	ENSRNOT00000026960|Sgta|ENSRNOG00000019891|small glutamine rich tetratricopeptide repeat containing alpha [Source:RGD Symbol%3BAcc:620815]
rn6_v1_chr6_+_128973956_128973956	0.0673303	Rfx3_Rfx1_Rfx4	ENSRNOT00000075399|Fam181a|ENSRNOG00000048412|family with sequence similarity 181%2C member A [Source:RGD Symbol%3BAcc:6504274]
rn6_v1_chr8_-_25669394_25669394	0.0669886	Rfx3_Rfx1_Rfx4	ENSRNOT00000036738|Dpy19l1|ENSRNOG00000026589|dpy-19 like 1 [Source:RGD Symbol%3BAcc:1305822]
rn6_v1_chr8_+_117355943_117355943	0.0663763	Rfx3_Rfx1_Rfx4	ENSRNOT00000027318|Dalrd3|ENSRNOG00000020159|DALR anticodon binding domain containing 3 [Source:RGD Symbol%3BAcc:1359206]
rn6_v1_chr19_+_33130303_33130303	0.0659837	Rfx3_Rfx1_Rfx4	ENSRNOT00000048673|LOC102550668|ENSRNOG00000033487|60S ribosomal protein L21-like [Source:RGD Symbol%3BAcc:7700714]
rn6_v1_chr9_+_16543688_16543688	0.0655463	Rfx3_Rfx1_Rfx4	ENSRNOT00000021868|Cnpy3|ENSRNOG00000016315|canopy FGF signaling regulator 3 [Source:RGD Symbol%3BAcc:1597709]
rn6_v1_chr1_-_261051498_261051498	0.0654716	Rfx3_Rfx1_Rfx4	ENSRNOT00000071417|Arhgap19|ENSRNOG00000048166|Rho GTPase activating protein 19 [Source:RGD Symbol%3BAcc:1593044]
rn6_v1_chr2_-_235951275_235951275	0.0651101	Rfx3_Rfx1_Rfx4	ENSRNOT00000050291|AABR07013410.1|ENSRNOG00000047992|
rn6_v1_chr19_+_17115412_17115412	0.0649263	Rfx3_Rfx1_Rfx4	ENSRNOT00000015876|Rpgrip1l|ENSRNOG00000011829|Rpgrip1-like [Source:RGD Symbol%3BAcc:1311099]
rn6_v1_chr6_+_95816749_95816749	0.0648202	Rfx3_Rfx1_Rfx4	ENSRNOT00000008880|Six6|ENSRNOG00000006296|SIX homeobox 6 [Source:RGD Symbol%3BAcc:1310497]
rn6_v1_chr5_-_139931366_139931366	0.0643598	Rfx3_Rfx1_Rfx4	ENSRNOT00000015250|Smap2|ENSRNOG00000011421|small ArfGAP2 [Source:RGD Symbol%3BAcc:1308418]
rn6_v1_chr6_+_108167716_108167716	0.0642153	Rfx3_Rfx1_Rfx4	ENSRNOT00000064426|Lin52|ENSRNOG00000043441|lin-52 DREAM MuvB core complex component [Source:RGD Symbol%3BAcc:1306798]
rn6_v1_chr1_-_241460868_241460868	0.064058	Rfx3_Rfx1_Rfx4	ENSRNOT00000054776|RGD1560242|ENSRNOG00000036615|similar to RIKEN cDNA 1700028P14 [Source:RGD Symbol%3BAcc:1560242]
rn6_v1_chr3_+_159902441_159902524	0.0636968	Rfx3_Rfx1_Rfx4	ENSRNOT00000089893|Hnf4a|ENSRNOG00000008895|hepatocyte nuclear factor 4%2C alpha [Source:RGD Symbol%3BAcc:2810]	ENSRNOT00000011978|Hnf4a|ENSRNOG00000008895|hepatocyte nuclear factor 4%2C alpha [Source:RGD Symbol%3BAcc:2810]
rn6_v1_chr1_-_91042230_91042230	0.0632709	Rfx3_Rfx1_Rfx4	ENSRNOT00000073107|LOC103690054|ENSRNOG00000050560|DNA-directed RNA polymerase II subunit RPB9 [Source:RGD Symbol%3BAcc:9095262]
rn6_v1_chr2_+_211381036_211381036	0.0632267	Rfx3_Rfx1_Rfx4	ENSRNOT00000055862|Wdr47|ENSRNOG00000020330|WD repeat domain 47 [Source:RGD Symbol%3BAcc:1309181]
rn6_v1_chr6_+_108123816_108123855	0.0631047	Rfx3_Rfx1_Rfx4	ENSRNOT00000089242|Bbof1|ENSRNOG00000011376|basal body orientation factor 1 [Source:RGD Symbol%3BAcc:1560978]	ENSRNOT00000063900|Bbof1|ENSRNOG00000011376|basal body orientation factor 1 [Source:RGD Symbol%3BAcc:1560978]
rn6_v1_chr20_+_4392626_4392626	0.0630034	Rfx3_Rfx1_Rfx4	ENSRNOT00000000495|Prrt1|ENSRNOG00000000433|proline-rich transmembrane protein 1 [Source:RGD Symbol%3BAcc:1359348]
rn6_v1_chr1_+_37507276_37507276	0.0629588	Rfx3_Rfx1_Rfx4	ENSRNOT00000047627|Adcy2|ENSRNOG00000032150|adenylate cyclase 2 [Source:RGD Symbol%3BAcc:619965]
rn6_v1_chr16_-_7408265_7408265	0.0628011	Rfx3_Rfx1_Rfx4	ENSRNOT00000035009|Dnah1|ENSRNOG00000026914|dynein%2C axonemal%2C heavy chain 1 [Source:RGD Symbol%3BAcc:621795]
rn6_v1_chr2_-_34419428_34419428	0.0627023	Rfx3_Rfx1_Rfx4	ENSRNOT00000048123|AABR07007905.1|ENSRNOG00000049248|
rn6_v1_chr5_-_57683932_57683932	0.0623855	Rfx3_Rfx1_Rfx4	ENSRNOT00000074796|Dcaf12|ENSRNOG00000050790|DDB1 and CUL4 associated factor 12 [Source:MGI Symbol%3BAcc:MGI:1916220]
rn6_v1_chr9_-_100070650_100070650	0.0621671	Rfx3_Rfx1_Rfx4	ENSRNOT00000071359|Ankmy1|ENSRNOG00000048567|ankyrin repeat and MYND domain containing 1 [Source:RGD Symbol%3BAcc:1595229]
rn6_v1_chr1_+_227217552_227217552	0.0620935	Rfx3_Rfx1_Rfx4	ENSRNOT00000074966|LOC100911403|ENSRNOG00000045611|membrane-spanning 4-domains subfamily A member 4A-like [Source:RGD Symbol%3BAcc:6493207]
rn6_v1_chr13_-_90641772_90641772	0.0615592	Rfx3_Rfx1_Rfx4	ENSRNOT00000064601|Atp1a4|ENSRNOG00000032378|ATPase Na+/K+ transporting subunit alpha 4 [Source:RGD Symbol%3BAcc:61952]
rn6_v1_chr1_+_192025357_192025357	0.0607209	Rfx3_Rfx1_Rfx4	ENSRNOT00000025072|Ubfd1|ENSRNOG00000018243|ubiquitin family domain containing 1 [Source:RGD Symbol%3BAcc:1306614]
rn6_v1_chr1_-_212548730_212548730	0.0604932	Rfx3_Rfx1_Rfx4	ENSRNOT00000089729|Caly|ENSRNOG00000018337|calcyon neuron-specific vesicular protein [Source:RGD Symbol%3BAcc:621719]
rn6_v1_chr5_-_2982603_2982603	0.060302	Rfx3_Rfx1_Rfx4	ENSRNOT00000045460|Kcnb2|ENSRNOG00000028991|potassium voltage-gated channel subfamily B member 2 [Source:RGD Symbol%3BAcc:621349]
rn6_v1_chr7_+_116739062_116739156	0.0601912	Rfx3_Rfx1_Rfx4	ENSRNOT00000075837|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]	ENSRNOT00000076670|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]	ENSRNOT00000010065|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]
rn6_v1_chr2_-_116372226_116372226	0.0598775	Rfx3_Rfx1_Rfx4	ENSRNOT00000011932|Lrriq4|ENSRNOG00000009004|leucine-rich repeats and IQ motif containing 4 [Source:RGD Symbol%3BAcc:2323202]
rn6_v1_chr14_-_33430956_33430956	0.0596091	Rfx3_Rfx1_Rfx4	ENSRNOT00000002860|Thegl|ENSRNOG00000002085|theg spermatid protein-like [Source:RGD Symbol%3BAcc:1562571]
rn6_v1_chr12_+_17734133_17734133	0.0593043	Rfx3_Rfx1_Rfx4	ENSRNOT00000042117|Pdgfa|ENSRNOG00000001312|platelet derived growth factor subunit A [Source:RGD Symbol%3BAcc:3282]
rn6_v1_chr1_-_52354175_52354175	0.0591961	Rfx3_Rfx1_Rfx4	ENSRNOT00000015010|MGC94891|ENSRNOG00000011243|hypothetical protein LOC681210 [Source:RGD Symbol%3BAcc:1598061]
rn6_v1_chr11_-_31892531_31892531	0.0589772	Rfx3_Rfx1_Rfx4	ENSRNOT00000033745|Cryzl1|ENSRNOG00000028014|crystallin zeta like 1 [Source:RGD Symbol%3BAcc:1310219]
rn6_v1_chr14_+_84150908_84150908	0.0589452	Rfx3_Rfx1_Rfx4	ENSRNOT00000005516|Dusp18|ENSRNOG00000024945|dual specificity phosphatase 18 [Source:RGD Symbol%3BAcc:1306929]
rn6_v1_chr5_+_147803735_147803735	0.0589049	Rfx3_Rfx1_Rfx4	ENSRNOT00000074235|Tmem234|ENSRNOG00000049326|transmembrane protein 234 [Source:RGD Symbol%3BAcc:1583487]
rn6_v1_chr3_+_160908769_160908769	0.0582469	Rfx3_Rfx1_Rfx4	ENSRNOT00000030054|Sys1|ENSRNOG00000014480|Sys1 golgi trafficking protein [Source:RGD Symbol%3BAcc:1583224]
rn6_v1_chr9_-_10471009_10471009	0.0582426	Rfx3_Rfx1_Rfx4	ENSRNOT00000072868|Safb|ENSRNOG00000050543|scaffold attachment factor B [Source:RGD Symbol%3BAcc:620613]
rn6_v1_chr1_-_191948975_191948977	0.0581495	Rfx3_Rfx1_Rfx4	ENSRNOT00000077869|Cog7|ENSRNOG00000060008|component of oligomeric golgi complex 7 [Source:RGD Symbol%3BAcc:1566058]	ENSRNOT00000080534|Cog7|ENSRNOG00000060008|component of oligomeric golgi complex 7 [Source:RGD Symbol%3BAcc:1566058]
rn6_v1_chr13_+_49933155_49933155	0.0577545	Rfx3_Rfx1_Rfx4	ENSRNOT00000037039|Ppp1r15b|ENSRNOG00000028493|protein phosphatase 1%2C regulatory subunit 15B [Source:RGD Symbol%3BAcc:1307944]
rn6_v1_chr5_+_24146171_24146171	0.057683	Rfx3_Rfx1_Rfx4	ENSRNOT00000037547|MGC94199|ENSRNOG00000026672|similar to RIKEN cDNA 2610301B20%3B EST AI428449 [Source:RGD Symbol%3BAcc:1549749]
rn6_v1_chrX_-_29825439_29825439	0.0567722	Rfx3_Rfx1_Rfx4	ENSRNOT00000048155|Gemin8|ENSRNOG00000029038|gem (nuclear organelle) associated protein 8 [Source:RGD Symbol%3BAcc:1359160]
rn6_v1_chr8_+_21669236_21669236	0.0566204	Rfx3_Rfx1_Rfx4	ENSRNOT00000027818|Pin1|ENSRNOG00000020474|peptidylprolyl cis/trans isomerase%2C NIMA-interacting 1 [Source:RGD Symbol%3BAcc:1310299]
rn6_v1_chr12_-_37910439_37910439	0.0560015	Rfx3_Rfx1_Rfx4	ENSRNOT00000001433|Ogfod2|ENSRNOG00000001081|2-oxoglutarate and iron-dependent oxygenase domain containing 2 [Source:RGD Symbol%3BAcc:1310594]
rn6_v1_chr1_+_220428481_220428481	0.0557441	Rfx3_Rfx1_Rfx4	ENSRNOT00000027335|LOC108348044|ENSRNOG00000020133|ras and Rab interactor 1 [Source:RGD Symbol%3BAcc:11459991]
rn6_v1_chr12_+_7454884_7454884	0.0557082	Rfx3_Rfx1_Rfx4	ENSRNOT00000077328|LOC100910196|ENSRNOG00000047618|katanin p60 ATPase-containing subunit A-like 1-like [Source:RGD Symbol%3BAcc:6499844]
rn6_v1_chr3_+_147894558_147894558	0.0553074	Rfx3_Rfx1_Rfx4	ENSRNOT00000055415|LOC502684|ENSRNOG00000023721|hypothetical protein LOC502684 [Source:RGD Symbol%3BAcc:1559448]
rn6_v1_chrX_-_15504165_15504165	0.0548045	Rfx3_Rfx1_Rfx4	ENSRNOT00000006233|Otud5|ENSRNOG00000008764|OTU deubiquitinase 5 [Source:RGD Symbol%3BAcc:1563027]
rn6_v1_chr1_+_85162452_85162452	0.0546512	Rfx3_Rfx1_Rfx4	ENSRNOT00000093347|Pak4|ENSRNOG00000019883|p21 (RAC1) activated kinase 4 [Source:RGD Symbol%3BAcc:1307705]
rn6_v1_chr10_-_52710862_52710862	0.0546076	Rfx3_Rfx1_Rfx4	ENSRNOT00000005583|Dnah9|ENSRNOG00000004171|dynein%2C axonemal%2C heavy chain 9 [Source:RGD Symbol%3BAcc:621799]
rn6_v1_chr20_+_3300247_3300247	0.0545312	Rfx3_Rfx1_Rfx4	ENSRNOT00000035838|Prr3|ENSRNOG00000025806|proline rich 3 [Source:RGD Symbol%3BAcc:1303270]
rn6_v1_chr18_-_40123420_40123420	0.0543464	Rfx3_Rfx1_Rfx4	ENSRNOT00000080812|Trim36|ENSRNOG00000016612|tripartite motif-containing 36 [Source:RGD Symbol%3BAcc:1308714]
rn6_v1_chr8_+_23014956_23014956	0.0541641	Rfx3_Rfx1_Rfx4	ENSRNOT00000018009|Prkcsh|ENSRNOG00000013360|protein kinase C substrate 80K-H [Source:RGD Symbol%3BAcc:1309628]
rn6_v1_chr13_+_103396314_103396314	0.0541248	Rfx3_Rfx1_Rfx4	ENSRNOT00000049499|Slc30a10|ENSRNOG00000002397|solute carrier family 30%2C member 10 [Source:RGD Symbol%3BAcc:1305098]
rn6_v1_chr8_+_85489553_85489553	0.054062	Rfx3_Rfx1_Rfx4	ENSRNOT00000082158|Rpl12-ps1|ENSRNOG00000061579|ribosomal protein L12%2C pseudogene 1 [Source:RGD Symbol%3BAcc:1306318]
rn6_v1_chr2_-_22059149_22059149	0.0537153	Rfx3_Rfx1_Rfx4	ENSRNOT00000031909|Fam151b|ENSRNOG00000024136|family with sequence similarity 151%2C member B [Source:RGD Symbol%3BAcc:1561110]
rn6_v1_chr12_-_24102084_24102084	0.0531816	Rfx3_Rfx1_Rfx4	ENSRNOT00000001962|Rhbdd2|ENSRNOG00000001443|rhomboid domain containing 2 [Source:RGD Symbol%3BAcc:1308231]
rn6_v1_chr1_-_174350196_174350196	0.052577	Rfx3_Rfx1_Rfx4	ENSRNOT00000055158|LOC499240|ENSRNOG00000013713|similar to predicted gene ICRFP703B1614Q5.5 [Source:RGD Symbol%3BAcc:1565905]
rn6_v1_chr13_+_34365147_34365147	0.0525503	Rfx3_Rfx1_Rfx4	ENSRNOT00000093066|Clasp1|ENSRNOG00000002376|cytoplasmic linker associated protein 1 [Source:RGD Symbol%3BAcc:1310970]
rn6_v1_chr10_+_14258380_14258380	0.0523526	Rfx3_Rfx1_Rfx4	ENSRNOT00000021650|Nme3|ENSRNOG00000015749|NME/NM23 nucleoside diphosphate kinase 3 [Source:RGD Symbol%3BAcc:619879]
rn6_v1_chr8_-_27852996_27852996	0.0518597	Rfx3_Rfx1_Rfx4	ENSRNOT00000037790|Glb1l2|ENSRNOG00000007561|galactosidase%2C beta 1-like 2 [Source:RGD Symbol%3BAcc:1564436]
rn6_v1_chr3_-_133131192_133131192	0.0518548	Rfx3_Rfx1_Rfx4	ENSRNOT00000055630|Tasp1|ENSRNOG00000004493|taspase 1 [Source:RGD Symbol%3BAcc:1308591]
rn6_v1_chr14_+_17531398_17531398	0.0515574	Rfx3_Rfx1_Rfx4	ENSRNOT00000050038|Cdkl2|ENSRNOG00000002506|cyclin dependent kinase like 2 [Source:RGD Symbol%3BAcc:1309625]
rn6_v1_chr4_+_119997268_119997268	0.0515556	Rfx3_Rfx1_Rfx4	ENSRNOT00000073429|Rpn1|ENSRNOG00000046345|ribophorin I [Source:RGD Symbol%3BAcc:3594]
rn6_v1_chr5_-_58106706_58106706	0.0515329	Rfx3_Rfx1_Rfx4	ENSRNOT00000019561|Dctn3|ENSRNOG00000014208|dynactin subunit 3 [Source:RGD Symbol%3BAcc:1309547]
rn6_v1_chr11_-_61748583_61748583	0.051282	Rfx3_Rfx1_Rfx4	ENSRNOT00000093431|Ccdc191|ENSRNOG00000057815|coiled-coil domain containing 191 [Source:RGD Symbol%3BAcc:1566314]
rn6_v1_chr7_-_3074359_3074359	0.051037	Rfx3_Rfx1_Rfx4	ENSRNOT00000019738|Ikzf4|ENSRNOG00000005535|IKAROS family zinc finger 4 [Source:RGD Symbol%3BAcc:2319157]
rn6_v1_chr17_+_21521505_21521505	0.0505695	Rfx3_Rfx1_Rfx4	ENSRNOT00000020672|Mak|ENSRNOG00000015101|male germ cell-associated kinase [Source:RGD Symbol%3BAcc:3036]
rn6_v1_chr7_-_76294663_76294663	0.0503628	Rfx3_Rfx1_Rfx4	ENSRNOT00000064513|Ncald|ENSRNOG00000042978|neurocalcin delta [Source:RGD Symbol%3BAcc:1560287]
rn6_v1_chr20_+_2094931_2094931	0.0500698	Rfx3_Rfx1_Rfx4	ENSRNOT00000001013|Ppp1r11|ENSRNOG00000000780|protein phosphatase 1%2C regulatory (inhibitor) subunit 11 [Source:RGD Symbol%3BAcc:1303163]
rn6_v1_chr2_+_209358760_209358760	0.0496219	Rfx3_Rfx1_Rfx4	ENSRNOT00000082631|Lrif1|ENSRNOG00000017784|ligand dependent nuclear receptor interacting factor 1 [Source:RGD Symbol%3BAcc:1306520]
rn6_v1_chr5_+_23358841_23358841	0.0495541	Rfx3_Rfx1_Rfx4	ENSRNOT00000070963|MGC94199|ENSRNOG00000049287|similar to RIKEN cDNA 2610301B20%3B EST AI428449 [Source:RGD Symbol%3BAcc:1549749]
rn6_v1_chr19_-_56010004_56010004	0.0493684	Rfx3_Rfx1_Rfx4	ENSRNOT00000021483|Chmp1a|ENSRNOG00000016001|charged multivesicular body protein 1A [Source:RGD Symbol%3BAcc:1311083]
rn6_v1_chr5_+_144067416_144067416	0.0488482	Rfx3_Rfx1_Rfx4	ENSRNOT00000037246|Oscp1|ENSRNOG00000026978|organic solute carrier partner 1 [Source:RGD Symbol%3BAcc:1306596]
rn6_v1_chr5_-_25750826_25750826	0.048416	Rfx3_Rfx1_Rfx4	ENSRNOT00000022249|Fam92a|ENSRNOG00000016338|family with sequence similarity 92 member A [Source:RGD Symbol%3BAcc:1310681]
rn6_v1_chr1_-_157461588_157461588	0.0481578	Rfx3_Rfx1_Rfx4	ENSRNOT00000068402|Ankrd42|ENSRNOG00000009664|ankyrin repeat domain 42 [Source:RGD Symbol%3BAcc:1310789]
rn6_v1_chr6_-_92121351_92121351	0.0480446	Rfx3_Rfx1_Rfx4	ENSRNOT00000006374|Cdkl1|ENSRNOG00000038720|cyclin dependent kinase like 1 [Source:RGD Symbol%3BAcc:1305080]
rn6_v1_chr7_+_94375020_94375020	0.0479394	Rfx3_Rfx1_Rfx4	ENSRNOT00000011904|Nov|ENSRNOG00000008697|nephroblastoma overexpressed [Source:RGD Symbol%3BAcc:621553]
rn6_v1_chr20_+_4530342_4530365	0.0479301	Rfx3_Rfx1_Rfx4	ENSRNOT00000076352|Nelfe|ENSRNOG00000000420|negative elongation factor complex member E [Source:RGD Symbol%3BAcc:1303325]	ENSRNOT00000000478|Nelfe|ENSRNOG00000000420|negative elongation factor complex member E [Source:RGD Symbol%3BAcc:1303325]	ENSRNOT00000075925|Nelfe|ENSRNOG00000000420|negative elongation factor complex member E [Source:RGD Symbol%3BAcc:1303325]
rn6_v1_chr7_+_77066955_77066955	0.047475	Rfx3_Rfx1_Rfx4	ENSRNOT00000008700|Odf1|ENSRNOG00000006578|outer dense fiber of sperm tails 1 [Source:RGD Symbol%3BAcc:3228]
rn6_v1_chrX_+_10430847_10430847	0.0473014	Rfx3_Rfx1_Rfx4	ENSRNOT00000047936|Rpl21|ENSRNOG00000032803|ribosomal protein L21 [Source:RGD Symbol%3BAcc:68390]
rn6_v1_chr9_+_42315682_42315682	0.0469584	Rfx3_Rfx1_Rfx4	ENSRNOT00000071995|AABR07067388.1|ENSRNOG00000045975|
rn6_v1_chr13_+_97702097_97702097	0.0461584	Rfx3_Rfx1_Rfx4	ENSRNOT00000057787|LOC103689999|ENSRNOG00000046051|saccharopine dehydrogenase-like oxidoreductase [Source:RGD Symbol%3BAcc:9250610]
rn6_v1_chr3_+_58632476_58632476	0.0457288	Rfx3_Rfx1_Rfx4	ENSRNOT00000010630|Rapgef4|ENSRNOG00000001516|Rap guanine nucleotide exchange factor 4 [Source:RGD Symbol%3BAcc:621886]
rn6_v1_chr20_+_5441876_5441876	0.0453618	Rfx3_Rfx1_Rfx4	ENSRNOT00000092476|Rps18|ENSRNOG00000028505|ribosomal protein S18 [Source:RGD Symbol%3BAcc:3595]
rn6_v1_chr2_-_104830898_104830898	0.0451286	Rfx3_Rfx1_Rfx4	ENSRNOT00000050440|Hps3|ENSRNOG00000031406|Hermansky-Pudlak syndrome 3 [Source:RGD Symbol%3BAcc:1310548]
rn6_v1_chr6_+_86713604_86713604	0.0450704	Rfx3_Rfx1_Rfx4	ENSRNOT00000059271|Fam179b|ENSRNOG00000004415|family with sequence similarity 179%2C member B [Source:RGD Symbol%3BAcc:1310474]
rn6_v1_chr10_+_46840113_46840113	0.0450082	Rfx3_Rfx1_Rfx4	ENSRNOT00000086083|Myo15a|ENSRNOG00000059219|myosin XVA [Source:RGD Symbol%3BAcc:1561873]	ENSRNOT00000079133|Myo15a|ENSRNOG00000059219|myosin XVA [Source:RGD Symbol%3BAcc:1561873]
rn6_v1_chr14_+_8080275_8080277	0.0447967	Rfx3_Rfx1_Rfx4	ENSRNOT00000065965|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]	ENSRNOT00000092542|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]
rn6_v1_chr2_-_123323170_123323170	0.0446351	Rfx3_Rfx1_Rfx4	ENSRNOT00000021453|Bbs7|ENSRNOG00000015816|Bardet-Biedl syndrome 7 [Source:RGD Symbol%3BAcc:1309264]
rn6_v1_chr10_-_91117889_91117889	0.0445734	Rfx3_Rfx1_Rfx4	ENSRNOT00000031498|Dcakd|ENSRNOG00000021682|dephospho-CoA kinase domain containing [Source:RGD Symbol%3BAcc:1359211]
rn6_v1_chr14_-_34115273_34115273	0.0445135	Rfx3_Rfx1_Rfx4	ENSRNOT00000032156|Cep135|ENSRNOG00000002153|centrosomal protein 135 [Source:RGD Symbol%3BAcc:1310726]
rn6_v1_chr15_+_4285052_4285052	0.0439598	Rfx3_Rfx1_Rfx4	ENSRNOT00000035345|Cfap70|ENSRNOG00000007046|cilia and flagella associated protein 70 [Source:RGD Symbol%3BAcc:1307577]
rn6_v1_chr9_-_81467760_81467760	0.0438642	Rfx3_Rfx1_Rfx4	ENSRNOT00000090868|Cxcr1|ENSRNOG00000048239|C-X-C motif chemokine receptor 1 [Source:RGD Symbol%3BAcc:2905]
rn6_v1_chr1_-_56967895_56967895	0.043302	Rfx3_Rfx1_Rfx4	ENSRNOT00000085273|Phf10|ENSRNOG00000061312|PHD finger protein 10 [Source:RGD Symbol%3BAcc:1305266]
rn6_v1_chr17_-_5463898_5463898	0.0431031	Rfx3_Rfx1_Rfx4	ENSRNOT00000025096|Naa35|ENSRNOG00000018417|N(alpha)-acetyltransferase 35%2C NatC auxiliary subunit [Source:RGD Symbol%3BAcc:621771]
rn6_v1_chrX_+_105134498_105134498	0.0428805	Rfx3_Rfx1_Rfx4	ENSRNOT00000002058|Tmem35|ENSRNOG00000001506|transmembrane protein 35 [Source:RGD Symbol%3BAcc:1303093]
rn6_v1_chr11_-_1819094_1819094	0.0426474	Rfx3_Rfx1_Rfx4	ENSRNOT00000000911|MGC95208|ENSRNOG00000000720|similar to 4930453N24Rik protein [Source:RGD Symbol%3BAcc:1359320]
rn6_v1_chr12_-_20660304_20660304	0.0425149	Rfx3_Rfx1_Rfx4	ENSRNOT00000091323|RGD1561730|ENSRNOG00000057141|similar to cell surface receptor FDFACT [Source:RGD Symbol%3BAcc:1561730]
rn6_v1_chr13_-_50761306_50761355	0.0424652	Rfx3_Rfx1_Rfx4	ENSRNOT00000076610|Prelp|ENSRNOG00000003120|proline and arginine rich end leucine rich repeat protein [Source:RGD Symbol%3BAcc:620226]	ENSRNOT00000004241|Prelp|ENSRNOG00000003120|proline and arginine rich end leucine rich repeat protein [Source:RGD Symbol%3BAcc:620226]
rn6_v1_chr1_-_226630900_226630900	0.0419356	Rfx3_Rfx1_Rfx4	ENSRNOT00000028092|Tmem138|ENSRNOG00000020693|transmembrane protein 138 [Source:RGD Symbol%3BAcc:735168]
rn6_v1_chrX_-_72078551_72078551	0.0416872	Rfx3_Rfx1_Rfx4	ENSRNOT00000076978|Rps4x|ENSRNOG00000003201|ribosomal protein S4%2C X-linked [Source:RGD Symbol%3BAcc:2324318]
rn6_v1_chr14_+_89253373_89253373	0.041588	Rfx3_Rfx1_Rfx4	ENSRNOT00000035922|LOC688553|ENSRNOG00000037632|hypothetical protein LOC688553 [Source:RGD Symbol%3BAcc:1587626]
rn6_v1_chr10_+_10808823_10808823	0.0415062	Rfx3_Rfx1_Rfx4	ENSRNOT00000004298|Anks3|ENSRNOG00000003186|ankyrin repeat and sterile alpha motif domain containing 3 [Source:RGD Symbol%3BAcc:1305833]
rn6_v1_chr8_+_116318963_116318963	0.0414301	Rfx3_Rfx1_Rfx4	ENSRNOT00000036556|Tusc2|ENSRNOG00000021528|tumor suppressor candidate 2 [Source:RGD Symbol%3BAcc:1561664]
rn6_v1_chr1_-_205842428_205842428	0.0412672	Rfx3_Rfx1_Rfx4	ENSRNOT00000024655|Dhx32|ENSRNOG00000018119|DEAH-box helicase 32 (putative) [Source:RGD Symbol%3BAcc:1311740]
rn6_v1_chr6_-_103187275_103187275	0.0406641	Rfx3_Rfx1_Rfx4	ENSRNOT00000083272|LOC100359616|ENSRNOG00000055777|ribosomal protein L36-like [Source:RGD Symbol%3BAcc:2325111]
rn6_v1_chr9_-_10471176_10471176	0.0404431	Rfx3_Rfx1_Rfx4	ENSRNOT00000089164|Safb|ENSRNOG00000050543|scaffold attachment factor B [Source:RGD Symbol%3BAcc:620613]
rn6_v1_chr1_+_192025710_192025710	0.0403936	Rfx3_Rfx1_Rfx4	ENSRNOT00000077457|Ubfd1|ENSRNOG00000018243|ubiquitin family domain containing 1 [Source:RGD Symbol%3BAcc:1306614]
rn6_v1_chr16_-_7082193_7082193	0.0403367	Rfx3_Rfx1_Rfx4	ENSRNOT00000024447|Spcs1|ENSRNOG00000018075|signal peptidase complex subunit 1 [Source:RGD Symbol%3BAcc:1309125]
rn6_v1_chr2_+_165601007_165601007	0.0399056	Rfx3_Rfx1_Rfx4	ENSRNOT00000013931|Smc4|ENSRNOG00000010274|structural maintenance of chromosomes 4 [Source:RGD Symbol%3BAcc:1306680]
rn6_v1_chr1_-_191676915_191676915	0.0398562	Rfx3_Rfx1_Rfx4	ENSRNOT00000082927|Usp31|ENSRNOG00000025793|ubiquitin specific peptidase 31 [Source:RGD Symbol%3BAcc:1308183]
rn6_v1_chr3_+_160467552_160467552	0.0396352	Rfx3_Rfx1_Rfx4	ENSRNOT00000066657|Stk4|ENSRNOG00000013529|serine/threonine kinase 4 [Source:RGD Symbol%3BAcc:1312035]
rn6_v1_chr1_-_281376834_281376834	0.0393105	Rfx3_Rfx1_Rfx4	ENSRNOT00000013031|Fam204a|ENSRNOG00000009830|family with sequence similarity 204%2C member A [Source:RGD Symbol%3BAcc:1305500]
rn6_v1_chr4_+_118160147_118160147	0.0392377	Rfx3_Rfx1_Rfx4	ENSRNOT00000022014|Fam136a|ENSRNOG00000016273|family with sequence similarity 136%2C member A [Source:RGD Symbol%3BAcc:1304825]
rn6_v1_chr2_-_189333015_189333015	0.0389345	Rfx3_Rfx1_Rfx4	ENSRNOT00000076424|Hax1|ENSRNOG00000045647|HCLS1 associated protein X-1 [Source:RGD Symbol%3BAcc:727960]	ENSRNOT00000076952|Hax1|ENSRNOG00000045647|HCLS1 associated protein X-1 [Source:RGD Symbol%3BAcc:727960]
rn6_v1_chr13_+_56546021_56546021	0.0386235	Rfx3_Rfx1_Rfx4	ENSRNOT00000016797|Aspm|ENSRNOG00000012318|abnormal spindle microtubule assembly [Source:RGD Symbol%3BAcc:1307111]
rn6_v1_chr3_-_3594475_3594475	0.0384444	Rfx3_Rfx1_Rfx4	ENSRNOT00000064861|RGD1564379|ENSRNOG00000042501|RGD1564379 [Source:RGD Symbol%3BAcc:1564379]
rn6_v1_chr1_-_226606344_226606344	0.0383878	Rfx3_Rfx1_Rfx4	ENSRNOT00000028079|Tmem216|ENSRNOG00000020692|transmembrane protein 216 [Source:RGD Symbol%3BAcc:1304607]
rn6_v1_chr5_+_156026911_156026911	0.0383465	Rfx3_Rfx1_Rfx4	ENSRNOT00000046802|Rap1gap|ENSRNOG00000013825|Rap1 GTPase-activating protein [Source:RGD Symbol%3BAcc:1309908]
rn6_v1_chr20_-_12128747_12128747	0.0383409	Rfx3_Rfx1_Rfx4	ENSRNOT00000001644|Pofut2|ENSRNOG00000001228|protein O-fucosyltransferase 2 [Source:RGD Symbol%3BAcc:1307334]
rn6_v1_chr17_-_84705052_84705052	0.0382387	Rfx3_Rfx1_Rfx4	ENSRNOT00000050803|AABR07028749.1|ENSRNOG00000045917|
rn6_v1_chr10_+_47785033_47785078	0.0381529	Rfx3_Rfx1_Rfx4	ENSRNOT00000075073|B9d1|ENSRNOG00000047790|B9 domain containing 1 [Source:RGD Symbol%3BAcc:1305522]	ENSRNOT00000084944|B9d1|ENSRNOG00000047790|B9 domain containing 1 [Source:RGD Symbol%3BAcc:1305522]
rn6_v1_chr1_+_222198534_222198534	0.0380818	Rfx3_Rfx1_Rfx4	ENSRNOT00000028712|Bad|ENSRNOG00000021147|BCL2-associated agonist of cell death [Source:RGD Symbol%3BAcc:620103]
rn6_v1_chr17_+_55065621_55065621	0.0379631	Rfx3_Rfx1_Rfx4	ENSRNOT00000086342|Zfp438|ENSRNOG00000028329|zinc finger protein 438 [Source:RGD Symbol%3BAcc:1307214]
rn6_v1_chr20_+_3299730_3299730	0.0378487	Rfx3_Rfx1_Rfx4	ENSRNOT00000078538|Prr3|ENSRNOG00000025806|proline rich 3 [Source:RGD Symbol%3BAcc:1303270]
rn6_v1_chr12_-_38274036_38274036	0.0376277	Rfx3_Rfx1_Rfx4	ENSRNOT00000063990|Kntc1|ENSRNOG00000033658|kinetochore associated 1 [Source:RGD Symbol%3BAcc:1307905]
rn6_v1_chr15_+_41084206_41084213	0.0375068	Rfx3_Rfx1_Rfx4	ENSRNOT00000085785|Mipep|ENSRNOG00000013876|mitochondrial intermediate peptidase [Source:RGD Symbol%3BAcc:621680]	ENSRNOT00000018845|Mipep|ENSRNOG00000013876|mitochondrial intermediate peptidase [Source:RGD Symbol%3BAcc:621680]
rn6_v1_chr1_-_167765552_167765552	0.0374865	Rfx3_Rfx1_Rfx4	ENSRNOT00000024954|Bcl2l1-ps1|ENSRNOG00000018503|Bcl2-like 1%2C pseudogene 1 [Source:RGD Symbol%3BAcc:1593913]
rn6_v1_chr7_+_140608434_140608434	0.0374104	Rfx3_Rfx1_Rfx4	ENSRNOT00000001163|AC114446.1|ENSRNOG00000059545|
rn6_v1_chr1_-_261333383_261333383	0.037324	Rfx3_Rfx1_Rfx4	ENSRNOT00000037490|Morn4|ENSRNOG00000027156|MORN repeat containing 4 [Source:RGD Symbol%3BAcc:1307336]
rn6_v1_chr17_+_53229785_53229785	0.0367878	Rfx3_Rfx1_Rfx4	ENSRNOT00000082040|Hecw1|ENSRNOG00000016046|HECT%2C C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1561038]
rn6_v1_chr7_-_121058029_121058029	0.0366804	Rfx3_Rfx1_Rfx4	ENSRNOT00000068033|Cbx6|ENSRNOG00000046955|chromobox 6 [Source:RGD Symbol%3BAcc:1307314]
rn6_v1_chr2_+_4252496_4252496	0.0366011	Rfx3_Rfx1_Rfx4	ENSRNOT00000071535|RGD1560883|ENSRNOG00000045639|similar to KIAA0825 protein [Source:RGD Symbol%3BAcc:1560883]
rn6_v1_chr14_-_59980586_59980586	0.0365225	Rfx3_Rfx1_Rfx4	ENSRNOT00000064713|LOC100361259|ENSRNOG00000055911|60S ribosomal protein L13-like [Source:RGD Symbol%3BAcc:2320504]
rn6_v1_chr1_+_166433109_166433109	0.0365173	Rfx3_Rfx1_Rfx4	ENSRNOT00000026428|Stard10|ENSRNOG00000019491|StAR-related lipid transfer domain containing 10 [Source:RGD Symbol%3BAcc:1306548]
rn6_v1_chr7_+_11677340_11677340	0.0364671	Rfx3_Rfx1_Rfx4	ENSRNOT00000026648|Timm13|ENSRNOG00000019682|translocase of inner mitochondrial membrane 13 [Source:RGD Symbol%3BAcc:628845]
rn6_v1_chr3_-_110324084_110324084	0.0364532	Rfx3_Rfx1_Rfx4	ENSRNOT00000010381|Bmf|ENSRNOG00000007529|Bcl2 modifying factor [Source:RGD Symbol%3BAcc:628658]
rn6_v1_chr10_+_18906010_18906010	0.0362569	Rfx3_Rfx1_Rfx4	ENSRNOT00000090659|Kcnmb1|ENSRNOG00000005465|potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:RGD Symbol%3BAcc:2961]
rn6_v1_chr17_-_42226377_42226377	0.036226	Rfx3_Rfx1_Rfx4	ENSRNOT00000024536|RGD1307443|ENSRNOG00000018141|similar to mKIAA0319 protein [Source:RGD Symbol%3BAcc:1307443]
rn6_v1_chr4_-_60358562_60358562	0.0360352	Rfx3_Rfx1_Rfx4	ENSRNOT00000018001|Chchd3|ENSRNOG00000013211|coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:RGD Symbol%3BAcc:1310325]
rn6_v1_chr8_-_48802204_48802204	0.035472	Rfx3_Rfx1_Rfx4	ENSRNOT00000077364|AC105645.4|ENSRNOG00000059654|
rn6_v1_chr3_-_71295575_71295629	0.0353336	Rfx3_Rfx1_Rfx4	ENSRNOT00000040303|Zswim2|ENSRNOG00000032579|zinc finger%2C SWIM-type containing 2 [Source:RGD Symbol%3BAcc:1311373]	ENSRNOT00000083015|Zswim2|ENSRNOG00000032579|zinc finger%2C SWIM-type containing 2 [Source:RGD Symbol%3BAcc:1311373]
rn6_v1_chr1_+_80056755_80056755	0.0351884	Rfx3_Rfx1_Rfx4	ENSRNOT00000021221|Snrpd2|ENSRNOG00000015844|small nuclear ribonucleoprotein D2 polypeptide [Source:RGD Symbol%3BAcc:1593018]
rn6_v1_chr6_-_128117579_128117579	0.0349332	Rfx3_Rfx1_Rfx4	ENSRNOT00000046749|LOC690435|ENSRNOG00000029253|hypothetical protein LOC690435 [Source:RGD Symbol%3BAcc:1596073]
rn6_v1_chr1_-_71399751_71399751	0.034749	Rfx3_Rfx1_Rfx4	ENSRNOT00000020787|Zfp444|ENSRNOG00000015517|zinc finger protein 444 [Source:RGD Symbol%3BAcc:1304847]
rn6_v1_chr12_-_21973474_21973474	0.0347075	Rfx3_Rfx1_Rfx4	ENSRNOT00000071110|RGD1566138|ENSRNOG00000052199|similar to Zinc finger%2C CW type with PWWP domain 1 [Source:RGD Symbol%3BAcc:1566138]
rn6_v1_chr7_-_140640953_140640953	0.0346839	Rfx3_Rfx1_Rfx4	ENSRNOT00000083156|Tuba1a|ENSRNOG00000060728|tubulin%2C alpha 1A [Source:RGD Symbol%3BAcc:619717]
rn6_v1_chr7_+_99609191_99609191	0.0344248	Rfx3_Rfx1_Rfx4	ENSRNOT00000012883|Sqle|ENSRNOG00000009550|squalene epoxidase [Source:RGD Symbol%3BAcc:3755]
rn6_v1_chr5_-_147803851_147803851	0.0343314	Rfx3_Rfx1_Rfx4	ENSRNOT00000071922|Eif3i|ENSRNOG00000047185|eukaryotic translation initiation factor 3%2C subunit I [Source:MGI Symbol%3BAcc:MGI:1860763]
rn6_v1_chr16_-_54137485_54137485	0.034041	Rfx3_Rfx1_Rfx4	ENSRNOT00000014202|Pcm1|ENSRNOG00000010155|pericentriolar material 1 [Source:RGD Symbol%3BAcc:620901]
rn6_v1_chr8_+_50310405_50310405	0.0338404	Rfx3_Rfx1_Rfx4	ENSRNOT00000073507|Sik3|ENSRNOG00000045931|SIK family kinase 3 [Source:RGD Symbol%3BAcc:1593938]
rn6_v1_chr4_+_157612536_157612536	0.0337821	Rfx3_Rfx1_Rfx4	ENSRNOT00000055970|Chd4|ENSRNOG00000018309|chromodomain helicase DNA binding protein 4 [Source:RGD Symbol%3BAcc:620064]
rn6_v1_chr10_+_53621375_53621375	0.0337558	Rfx3_Rfx1_Rfx4	ENSRNOT00000004147|Myh3|ENSRNOG00000046276|myosin heavy chain 3 [Source:RGD Symbol%3BAcc:3138]
rn6_v1_chr7_-_129919946_129919946	0.0337245	Rfx3_Rfx1_Rfx4	ENSRNOT00000079976|AABR07058658.1|ENSRNOG00000032311|
rn6_v1_chr10_-_89199736_89199736	0.0333247	Rfx3_Rfx1_Rfx4	ENSRNOT00000027782|Coa3|ENSRNOG00000020487|cytochrome C oxidase assembly factor 3 [Source:RGD Symbol%3BAcc:1564337]
rn6_v1_chr17_-_11037738_11037738	0.0332647	Rfx3_Rfx1_Rfx4	ENSRNOT00000043796|AABR07027015.1|ENSRNOG00000033625|
rn6_v1_chr12_-_21450204_21450204	0.0332413	Rfx3_Rfx1_Rfx4	ENSRNOT00000065866|LOC100910636|ENSRNOG00000050128|zinc finger CW-type PWWP domain protein 1-like [Source:RGD Symbol%3BAcc:6497217]
rn6_v1_chr3_-_80349145_80349145	0.0330023	Rfx3_Rfx1_Rfx4	ENSRNOT00000040633|RGD1309540|ENSRNOG00000014798|similar to hypothetical protein MGC40841%3B similar to hypothetical protein MGC4707 [Source:RGD Symbol%3BAcc:1309540]
rn6_v1_chr18_+_56193978_56194019	0.0329687	Rfx3_Rfx1_Rfx4	ENSRNOT00000041533|Camk2a|ENSRNOG00000018712|calcium/calmodulin-dependent protein kinase II alpha [Source:RGD Symbol%3BAcc:2261]	ENSRNOT00000080177|Camk2a|ENSRNOG00000018712|calcium/calmodulin-dependent protein kinase II alpha [Source:RGD Symbol%3BAcc:2261]
rn6_v1_chr12_+_10636275_10636275	0.0326604	Rfx3_Rfx1_Rfx4	ENSRNOT00000001285|Cyp3a18|ENSRNOG00000000969|cytochrome P450%2C family 3%2C subfamily a%2C polypeptide 18 [Source:RGD Symbol%3BAcc:628709]
rn6_v1_chr18_+_59096643_59096643	0.0323785	Rfx3_Rfx1_Rfx4	ENSRNOT00000025325|Wdr7|ENSRNOG00000018387|WD repeat domain 7 [Source:RGD Symbol%3BAcc:619836]
rn6_v1_chr7_-_75597276_75597276	0.031922	Rfx3_Rfx1_Rfx4	ENSRNOT00000035628|Ywhaz|ENSRNOG00000008195|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein%2C zeta [Source:RGD Symbol%3BAcc:3980]
rn6_v1_chr4_-_138830117_138830117	0.0314989	Rfx3_Rfx1_Rfx4	ENSRNOT00000008403|Il5ra|ENSRNOG00000005954|interleukin 5 receptor subunit alpha [Source:RGD Symbol%3BAcc:70938]
rn6_v1_chr10_-_72556564_72556564	0.0314447	Rfx3_Rfx1_Rfx4	ENSRNOT00000048373|AABR07030162.1|ENSRNOG00000031560|
rn6_v1_chr10_+_89339029_89339029	0.0313484	Rfx3_Rfx1_Rfx4	ENSRNOT00000031208|Rundc1|ENSRNOG00000023768|RUN domain containing 1 [Source:RGD Symbol%3BAcc:1307490]
rn6_v1_chr18_-_38088457_38088457	0.030959	Rfx3_Rfx1_Rfx4	ENSRNOT00000077814|Jakmip2|ENSRNOG00000019159|janus kinase and microtubule interacting protein 2 [Source:RGD Symbol%3BAcc:1559742]
rn6_v1_chr13_+_50103189_50103189	0.030758	Rfx3_Rfx1_Rfx4	ENSRNOT00000004078|Atp2b4|ENSRNOG00000003031|ATPase plasma membrane Ca2+ transporting 4 [Source:RGD Symbol%3BAcc:621305]
rn6_v1_chr3_-_10371240_10371240	0.0306113	Rfx3_Rfx1_Rfx4	ENSRNOT00000012075|Ass1|ENSRNOG00000008837|argininosuccinate synthase 1 [Source:RGD Symbol%3BAcc:2163]
rn6_v1_chr7_+_117055623_117055623	0.0305795	Rfx3_Rfx1_Rfx4	ENSRNOT00000012461|Mapk15|ENSRNOG00000009336|mitogen-activated protein kinase 15 [Source:RGD Symbol%3BAcc:628675]
rn6_v1_chr11_+_82862695_82862817	0.0305292	Rfx3_Rfx1_Rfx4	ENSRNOT00000071707|Clcn2|ENSRNOG00000050854|chloride voltage-gated channel 2 [Source:RGD Symbol%3BAcc:2361]	ENSRNOT00000073435|Clcn2|ENSRNOG00000050854|chloride voltage-gated channel 2 [Source:RGD Symbol%3BAcc:2361]
rn6_v1_chr7_-_75597087_75597087	0.0305243	Rfx3_Rfx1_Rfx4	ENSRNOT00000080676|Ywhaz|ENSRNOG00000008195|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein%2C zeta [Source:RGD Symbol%3BAcc:3980]
rn6_v1_chr3_+_7279340_7279340	0.0303334	Rfx3_Rfx1_Rfx4	ENSRNOT00000017029|Ak8|ENSRNOG00000012761|adenylate kinase 8 [Source:RGD Symbol%3BAcc:1303144]
rn6_v1_chr7_+_144899534_144899534	0.0300484	Rfx3_Rfx1_Rfx4	ENSRNOT00000065270|Copz1|ENSRNOG00000036835|coatomer protein complex%2C subunit zeta 1 [Source:RGD Symbol%3BAcc:1306154]
rn6_v1_chr19_-_57614558_57614558	0.0300215	Rfx3_Rfx1_Rfx4	ENSRNOT00000025948|RGD1562218|ENSRNOG00000019169|similar to RIKEN cDNA 0610039J04 [Source:RGD Symbol%3BAcc:1562218]
rn6_v1_chr19_+_32770655_32770655	0.0295403	Rfx3_Rfx1_Rfx4	ENSRNOT00000071471|LOC100360750|ENSRNOG00000049370|Sm protein F-like [Source:RGD Symbol%3BAcc:2321508]
rn6_v1_chr3_-_12502859_12502859	0.0290904	Rfx3_Rfx1_Rfx4	ENSRNOT00000022814|Zbtb43|ENSRNOG00000017017|zinc finger and BTB domain containing 43 [Source:RGD Symbol%3BAcc:1310287]
rn6_v1_chr17_+_78915604_78915604	0.0289777	Rfx3_Rfx1_Rfx4	ENSRNOT00000057855|Rpp38|ENSRNOG00000038025|ribonuclease P/MRP 38 subunit [Source:RGD Symbol%3BAcc:1307474]
rn6_v1_chr16_-_54137660_54137660	0.0289241	Rfx3_Rfx1_Rfx4	ENSRNOT00000085435|Pcm1|ENSRNOG00000010155|pericentriolar material 1 [Source:RGD Symbol%3BAcc:620901]
rn6_v1_chr10_+_29067102_29067102	0.0284191	Rfx3_Rfx1_Rfx4	ENSRNOT00000005161|C1qtnf2|ENSRNOG00000003870|C1q and tumor necrosis factor related protein 2 [Source:RGD Symbol%3BAcc:1561041]
rn6_v1_chr16_+_8207223_8207223	0.0281478	Rfx3_Rfx1_Rfx4	ENSRNOT00000026751|Oxnad1|ENSRNOG00000019760|oxidoreductase NAD-binding domain containing 1 [Source:RGD Symbol%3BAcc:1311534]
rn6_v1_chr11_+_83884048_83884048	0.0280683	Rfx3_Rfx1_Rfx4	ENSRNOT00000002376|LOC108348101|ENSRNOG00000001742|chloride channel protein 2 [Source:RGD Symbol%3BAcc:11384925]
rn6_v1_chr13_-_74276964_74276964	0.0280574	Rfx3_Rfx1_Rfx4	ENSRNOT00000005726|Tor3a|ENSRNOG00000004307|torsin family 3%2C member A [Source:RGD Symbol%3BAcc:1310101]
rn6_v1_chr15_+_25294425_25294425	0.0276681	Rfx3_Rfx1_Rfx4	ENSRNOT00000017871|Tmem260|ENSRNOG00000013353|transmembrane protein 260 [Source:RGD Symbol%3BAcc:1562018]
rn6_v1_chr19_+_55423350_55423350	0.0274295	Rfx3_Rfx1_Rfx4	ENSRNOT00000019740|Trappc2l|ENSRNOG00000014581|trafficking protein particle complex 2-like [Source:RGD Symbol%3BAcc:1304906]
rn6_v1_chr4_-_179700130_179700130	0.027201	Rfx3_Rfx1_Rfx4	ENSRNOT00000021306|Lmntd1|ENSRNOG00000015910|lamin tail domain containing 1 [Source:RGD Symbol%3BAcc:1560077]
rn6_v1_chr7_-_129970550_129970550	0.0271819	Rfx3_Rfx1_Rfx4	ENSRNOT00000055879|Mlc1|ENSRNOG00000032871|megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:RGD Symbol%3BAcc:1308552]
rn6_v1_chr16_-_49484985_49484985	0.0270048	Rfx3_Rfx1_Rfx4	ENSRNOT00000016723|Ufsp2|ENSRNOG00000012087|UFM1-specific peptidase 2 [Source:RGD Symbol%3BAcc:1311161]
rn6_v1_chr3_+_176721827_176721827	0.026792	Rfx3_Rfx1_Rfx4	ENSRNOT00000066617|Fndc11|ENSRNOG00000013243|fibronectin type III domain containing 11 [Source:RGD Symbol%3BAcc:1564340]
rn6_v1_chr14_-_1505085_1505085	0.0267569	Rfx3_Rfx1_Rfx4	ENSRNOT00000090361|LOC102554799|ENSRNOG00000054053|uncharacterized LOC102554799 [Source:RGD Symbol%3BAcc:7545280]
rn6_v1_chr5_+_8666200_8666200	0.0258549	Rfx3_Rfx1_Rfx4	ENSRNOT00000007766|Arfgef1|ENSRNOG00000005703|ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:RGD Symbol%3BAcc:1560793]
rn6_v1_chr6_-_107633012_107633012	0.0256446	Rfx3_Rfx1_Rfx4	ENSRNOT00000014018|Pnma1|ENSRNOG00000010553|paraneoplastic Ma antigen 1 [Source:RGD Symbol%3BAcc:621230]
rn6_v1_chr1_+_197903582_197903582	0.0252615	Rfx3_Rfx1_Rfx4	ENSRNOT00000025203|Tufm|ENSRNOG00000018604|Tu translation elongation factor%2C mitochondrial [Source:RGD Symbol%3BAcc:1305501]
rn6_v1_chr16_+_20336817_20336817	0.0251406	Rfx3_Rfx1_Rfx4	ENSRNOT00000044291|Kcnn1|ENSRNOG00000029264|potassium calcium-activated channel subfamily N member 1 [Source:RGD Symbol%3BAcc:2962]
rn6_v1_chrX_-_19145409_19145409	0.0249925	Rfx3_Rfx1_Rfx4	ENSRNOT00000043382|Foxr2|ENSRNOG00000030619|forkhead box R2 [Source:RGD Symbol%3BAcc:1564437]
rn6_v1_chr7_-_109205194_109205194	0.0248649	Rfx3_Rfx1_Rfx4	ENSRNOT00000093145|Zfat|ENSRNOG00000025140|zinc finger and AT hook domain containing [Source:RGD Symbol%3BAcc:1310886]
rn6_v1_chr10_+_55687050_55687050	0.0241049	Rfx3_Rfx1_Rfx4	ENSRNOT00000057136|Per1|ENSRNOG00000007387|period circadian clock 1 [Source:RGD Symbol%3BAcc:727863]
rn6_v1_chr3_+_152294656_152294656	0.0237794	Rfx3_Rfx1_Rfx4	ENSRNOT00000027067|Phf20|ENSRNOG00000019948|PHD finger protein 20 [Source:RGD Symbol%3BAcc:1305020]
rn6_v1_chr2_+_228544418_228544418	0.0232861	Rfx3_Rfx1_Rfx4	ENSRNOT00000013030|Tram1l1|ENSRNOG00000009835|translocation associated membrane protein 1-like 1 [Source:RGD Symbol%3BAcc:1306398]
rn6_v1_chr19_+_26173771_26173771	0.0231909	Rfx3_Rfx1_Rfx4	ENSRNOT00000005581|Fbxw9|ENSRNOG00000004212|F-box and WD repeat domain containing 9 [Source:RGD Symbol%3BAcc:1307002]
rn6_v1_chr11_+_83883879_83883879	0.0231417	Rfx3_Rfx1_Rfx4	ENSRNOT00000050927|LOC108348101|ENSRNOG00000001742|chloride channel protein 2 [Source:RGD Symbol%3BAcc:11384925]
rn6_v1_chr2_+_39434634_39434657	0.0227865	Rfx3_Rfx1_Rfx4	ENSRNOT00000013598|Ercc8|ENSRNOG00000009968|ERCC excision repair 8%2C CSA ubiquitin ligase complex subunit [Source:RGD Symbol%3BAcc:1311570]	ENSRNOT00000077938|Ercc8|ENSRNOG00000009968|ERCC excision repair 8%2C CSA ubiquitin ligase complex subunit [Source:RGD Symbol%3BAcc:1311570]
rn6_v1_chr12_+_37544918_37544918	0.0227864	Rfx3_Rfx1_Rfx4	ENSRNOT00000001403|Rilpl2|ENSRNOG00000001061|Rab interacting lysosomal protein-like 2 [Source:RGD Symbol%3BAcc:1303140]
rn6_v1_chr14_+_106008086_106008086	0.0225002	Rfx3_Rfx1_Rfx4	ENSRNOT00000009319|Peli1|ENSRNOG00000006329|pellino E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1311199]
rn6_v1_chr2_+_185393441_185393441	0.0223627	Rfx3_Rfx1_Rfx4	ENSRNOT00000015802|Sh3d19|ENSRNOG00000011752|SH3 domain containing 19 [Source:RGD Symbol%3BAcc:1304885]
rn6_v1_chr3_+_155103150_155103150	0.0223197	Rfx3_Rfx1_Rfx4	ENSRNOT00000020720|Slc32a1|ENSRNOG00000015393|solute carrier family 32 member 1 [Source:RGD Symbol%3BAcc:621402]
rn6_v1_chr19_+_27464937_27464937	0.0220073	Rfx3_Rfx1_Rfx4	ENSRNOT00000024020|Vps35|ENSRNOG00000017612|VPS35 retromer complex component [Source:RGD Symbol%3BAcc:1589784]
rn6_v1_chr20_+_21316826_21316826	0.0219922	Rfx3_Rfx1_Rfx4	ENSRNOT00000000785|RGD1306739|ENSRNOG00000000634|similar to RIKEN cDNA 1700040L02 [Source:RGD Symbol%3BAcc:1306739]
rn6_v1_chr20_-_5441706_5441706	0.0219539	Rfx3_Rfx1_Rfx4	ENSRNOT00000000549|Vps52|ENSRNOG00000000470|VPS52 GARP complex subunit [Source:RGD Symbol%3BAcc:3618]
rn6_v1_chr9_+_47724_47724	0.0219089	Rfx3_Rfx1_Rfx4	ENSRNOT00000016911|Efhb|ENSRNOG00000012618|EF hand domain family%2C member B [Source:RGD Symbol%3BAcc:1566407]
rn6_v1_chr14_-_21878989_21878989	0.0217205	Rfx3_Rfx1_Rfx4	ENSRNOT00000072327|Dzip1-ps1|ENSRNOG00000046611|DAZ interacting protein 1%2C pseudogene 1 [Source:RGD Symbol%3BAcc:1309071]
rn6_v1_chr4_+_151250041_151250041	0.0216757	Rfx3_Rfx1_Rfx4	ENSRNOT00000009832|Dcp1b|ENSRNOG00000007340|decapping mRNA 1B [Source:RGD Symbol%3BAcc:1562214]
rn6_v1_chr9_+_82436458_82436516	0.0216433	Rfx3_Rfx1_Rfx4	ENSRNOT00000026467|Dnajb2|ENSRNOG00000019506|DnaJ heat shock protein family (Hsp40) member B2 [Source:RGD Symbol%3BAcc:1591035]	ENSRNOT00000081958|Dnajb2|ENSRNOG00000019506|DnaJ heat shock protein family (Hsp40) member B2 [Source:RGD Symbol%3BAcc:1591035]
rn6_v1_chr19_-_26141111_26141111	0.0214923	Rfx3_Rfx1_Rfx4	ENSRNOT00000067518|Asna1|ENSRNOG00000003747|arsA arsenite transporter%2C ATP-binding%2C homolog 1 (bacterial) [Source:RGD Symbol%3BAcc:1307906]
rn6_v1_chr9_-_65916949_65916949	0.021257	Rfx3_Rfx1_Rfx4	ENSRNOT00000077483|Tmem237|ENSRNOG00000024085|transmembrane protein 237 [Source:RGD Symbol%3BAcc:1306705]
rn6_v1_chr4_+_178617401_178617401	0.0211468	Rfx3_Rfx1_Rfx4	ENSRNOT00000042619|AABR07062466.1|ENSRNOG00000033855|
rn6_v1_chr1_+_84280945_84280945	0.0210445	Rfx3_Rfx1_Rfx4	ENSRNOT00000057190|Sertad3|ENSRNOG00000037690|SERTA domain containing 3 [Source:RGD Symbol%3BAcc:1564271]
rn6_v1_chr1_-_213635546_213635546	0.0202772	Rfx3_Rfx1_Rfx4	ENSRNOT00000018861|Sirt3|ENSRNOG00000013828|sirtuin 3 [Source:RGD Symbol%3BAcc:1308374]
rn6_v1_chr14_-_59323947_59323947	0.0202768	Rfx3_Rfx1_Rfx4	ENSRNOT00000004006|Stim2|ENSRNOG00000002956|stromal interaction molecule 2 [Source:RGD Symbol%3BAcc:1304641]
rn6_v1_chr10_+_61626597_61626597	0.0201404	Rfx3_Rfx1_Rfx4	ENSRNOT00000003750|Mettl16|ENSRNOG00000002764|methyltransferase like 16 [Source:RGD Symbol%3BAcc:1593242]
rn6_v1_chr9_+_95295701_95295701	0.0200959	Rfx3_Rfx1_Rfx4	ENSRNOT00000025045|Ugt1a5|ENSRNOG00000018740|UDP glucuronosyltransferase family 1 member A5 [Source:RGD Symbol%3BAcc:1583689]
rn6_v1_chr7_+_11838639_11838639	0.0200557	Rfx3_Rfx1_Rfx4	ENSRNOT00000025878|Ap3d1|ENSRNOG00000018977|adaptor-related protein complex 3%2C delta 1 subunit [Source:RGD Symbol%3BAcc:1308659]
rn6_v1_chr7_+_117055395_117055395	0.0199515	Rfx3_Rfx1_Rfx4	ENSRNOT00000091960|Mapk15|ENSRNOG00000009336|mitogen-activated protein kinase 15 [Source:RGD Symbol%3BAcc:628675]
rn6_v1_chr9_+_10995198_10995198	0.01937	Rfx3_Rfx1_Rfx4	ENSRNOT00000089071|Ubxn6|ENSRNOG00000048509|UBX domain protein 6 [Source:RGD Symbol%3BAcc:1590866]
rn6_v1_chr7_-_116872511_116872511	0.0193022	Rfx3_Rfx1_Rfx4	ENSRNOT00000010120|Zc3h3|ENSRNOG00000007684|zinc finger CCCH type containing 3 [Source:RGD Symbol%3BAcc:1307276]
rn6_v1_chr8_+_84945444_84945444	0.0192118	Rfx3_Rfx1_Rfx4	ENSRNOT00000008244|Klhl31|ENSRNOG00000006224|kelch-like family member 31 [Source:RGD Symbol%3BAcc:1560540]
rn6_v1_chr1_-_15374850_15374850	0.0191359	Rfx3_Rfx1_Rfx4	ENSRNOT00000016728|Pex7|ENSRNOG00000012322|peroxisomal biogenesis factor 7 [Source:RGD Symbol%3BAcc:1308483]
rn6_v1_chr17_-_29438668_29438668	0.0191328	Rfx3_Rfx1_Rfx4	ENSRNOT00000021660|Fars2|ENSRNOG00000016135|phenylalanyl-tRNA synthetase 2%2C mitochondrial [Source:RGD Symbol%3BAcc:1309416]
rn6_v1_chr7_-_98197087_98197114	0.0189813	Rfx3_Rfx1_Rfx4	ENSRNOT00000010484|Klhl38|ENSRNOG00000007896|kelch-like family member 38 [Source:RGD Symbol%3BAcc:1564169]	ENSRNOT00000079961|Klhl38|ENSRNOG00000007896|kelch-like family member 38 [Source:RGD Symbol%3BAcc:1564169]
rn6_v1_chr10_-_58924137_58924137	0.0185326	Rfx3_Rfx1_Rfx4	ENSRNOT00000066740|Tekt1|ENSRNOG00000014973|tektin 1 [Source:RGD Symbol%3BAcc:619913]
rn6_v1_chr2_+_116372519_116372519	0.0180235	Rfx3_Rfx1_Rfx4	ENSRNOT00000031730|Lrrc34|ENSRNOG00000027935|leucine rich repeat containing 34 [Source:RGD Symbol%3BAcc:1565052]
rn6_v1_chr4_-_145699577_145699577	0.0178399	Rfx3_Rfx1_Rfx4	ENSRNOT00000014377|Sec13|ENSRNOG00000010628|SEC13 homolog%2C nuclear pore and COPII coat complex component [Source:RGD Symbol%3BAcc:1359555]
rn6_v1_chr1_-_167210919_167210919	0.0177677	Rfx3_Rfx1_Rfx4	ENSRNOT00000027507|Chrna10|ENSRNOG00000020293|cholinergic receptor nicotinic alpha 10 subunit [Source:RGD Symbol%3BAcc:620142]
rn6_v1_chr1_+_189364288_189364288	0.0176707	Rfx3_Rfx1_Rfx4	ENSRNOT00000080338|Acsm1|ENSRNOG00000042084|acyl-CoA synthetase medium-chain family member 1 [Source:RGD Symbol%3BAcc:1306813]
rn6_v1_chr10_+_94566928_94566928	0.0173059	Rfx3_Rfx1_Rfx4	ENSRNOT00000078446|Prr29|ENSRNOG00000060193|proline rich 29 [Source:RGD Symbol%3BAcc:1307288]
rn6_v1_chrX_+_54553878_54553878	0.0171167	Rfx3_Rfx1_Rfx4	ENSRNOT00000040231|Samt3|ENSRNOG00000029010|spermatogenesis associated multipass transmembrane protein 3 [Source:RGD Symbol%3BAcc:1583524]
rn6_v1_chr10_-_11878792_11878792	0.0168434	Rfx3_Rfx1_Rfx4	ENSRNOT00000064964|Cluap1|ENSRNOG00000007117|clusterin associated protein 1 [Source:RGD Symbol%3BAcc:1359189]
rn6_v1_chr1_-_197997664_197997664	0.0165676	Rfx3_Rfx1_Rfx4	ENSRNOT00000025898|Cln3|ENSRNOG00000019103|ceroid-lipofuscinosis%2C neuronal 3 [Source:RGD Symbol%3BAcc:1359537]
rn6_v1_chr1_-_47213749_47213749	0.0158417	Rfx3_Rfx1_Rfx4	ENSRNOT00000024656|Dynlt1|ENSRNOG00000018207|dynein light chain Tctex-type 1 [Source:RGD Symbol%3BAcc:620261]
rn6_v1_chr3_-_13896838_13896838	0.0157606	Rfx3_Rfx1_Rfx4	ENSRNOT00000025399|Fbxw2|ENSRNOG00000018687|F-box and WD repeat domain containing 2 [Source:RGD Symbol%3BAcc:1310460]
rn6_v1_chr17_+_76359022_76359042	0.0156624	Rfx3_Rfx1_Rfx4	ENSRNOT00000039621|Sec61a2|ENSRNOG00000023278|Sec61 translocon alpha 2 subunit [Source:RGD Symbol%3BAcc:1305948]	ENSRNOT00000092481|Sec61a2|ENSRNOG00000023278|Sec61 translocon alpha 2 subunit [Source:RGD Symbol%3BAcc:1305948]
rn6_v1_chr10_+_89376530_89376530	0.0154392	Rfx3_Rfx1_Rfx4	ENSRNOT00000028089|Rnd2|ENSRNOG00000020698|Rho family GTPase 2 [Source:RGD Symbol%3BAcc:1306172]
rn6_v1_chr1_+_218532045_218532045	0.0152593	Rfx3_Rfx1_Rfx4	ENSRNOT00000018848|Mrpl21|ENSRNOG00000013845|mitochondrial ribosomal protein L21 [Source:RGD Symbol%3BAcc:1310203]
rn6_v1_chrX_-_1346181_1346181	0.0152524	Rfx3_Rfx1_Rfx4	ENSRNOT00000042736|LOC102555453|ENSRNOG00000028993|60S ribosomal protein L12-like [Source:RGD Symbol%3BAcc:7600399]
rn6_v1_chr4_+_159403501_159403501	0.0149326	Rfx3_Rfx1_Rfx4	ENSRNOT00000086525|Akap3|ENSRNOG00000059227|A-kinase anchoring protein 3 [Source:RGD Symbol%3BAcc:1359735]
rn6_v1_chr20_+_5442390_5442390	0.0147832	Rfx3_Rfx1_Rfx4	ENSRNOT00000037499|Rps18|ENSRNOG00000028505|ribosomal protein S18 [Source:RGD Symbol%3BAcc:3595]
rn6_v1_chr10_+_34149717_34149752	0.0144146	Rfx3_Rfx1_Rfx4	ENSRNOT00000084232|Rack1|ENSRNOG00000052620|receptor for activated C kinase 1 [Source:RGD Symbol%3BAcc:69229]	ENSRNOT00000089829|Rack1|ENSRNOG00000052620|receptor for activated C kinase 1 [Source:RGD Symbol%3BAcc:69229]
rn6_v1_chr13_+_90184569_90184569	0.014377	Rfx3_Rfx1_Rfx4	ENSRNOT00000082393|Slamf1|ENSRNOG00000059073|signaling lymphocytic activation molecule family member 1 [Source:RGD Symbol%3BAcc:1560634]
rn6_v1_chr3_+_5558680_5558680	0.0143108	Rfx3_Rfx1_Rfx4	ENSRNOT00000083078|Cacfd1|ENSRNOG00000005840|calcium channel flower domain containing 1 [Source:RGD Symbol%3BAcc:1311501]
rn6_v1_chr19_+_9895121_9895121	0.0137111	Rfx3_Rfx1_Rfx4	ENSRNOT00000033953|Prss54|ENSRNOG00000023092|protease%2C serine%2C 54 [Source:RGD Symbol%3BAcc:1307877]
rn6_v1_chr9_+_65172194_65172194	0.013682	Rfx3_Rfx1_Rfx4	ENSRNOT00000040493|AC128084.1|ENSRNOG00000056310|
rn6_v1_chr9_-_117867557_117867557	0.0135551	Rfx3_Rfx1_Rfx4	ENSRNOT00000056321|AABR07068760.1|ENSRNOG00000050799|
rn6_v1_chr16_-_8207464_8207464	0.013481	Rfx3_Rfx1_Rfx4	ENSRNOT00000026742|Dph3|ENSRNOG00000019727|diphthamide biosynthesis 3 [Source:RGD Symbol%3BAcc:1590566]
rn6_v1_chr15_-_60056582_60056710	0.0134638	Rfx3_Rfx1_Rfx4	ENSRNOT00000087569|Dnajc15|ENSRNOG00000009063|DnaJ heat shock protein family (Hsp40) member C15 [Source:RGD Symbol%3BAcc:1307154]	ENSRNOT00000012530|Dnajc15|ENSRNOG00000009063|DnaJ heat shock protein family (Hsp40) member C15 [Source:RGD Symbol%3BAcc:1307154]
rn6_v1_chr3_-_148312420_148312420	0.0134544	Rfx3_Rfx1_Rfx4	ENSRNOT00000047416|Bcl2l1|ENSRNOG00000007946|Bcl2-like 1 [Source:RGD Symbol%3BAcc:2200]	ENSRNOT00000081272|Bcl2l1|ENSRNOG00000007946|Bcl2-like 1 [Source:RGD Symbol%3BAcc:2200]
rn6_v1_chr10_+_37458452_37458452	0.0133295	Rfx3_Rfx1_Rfx4	ENSRNOT00000079411|Cdkl3|ENSRNOG00000059485|cyclin-dependent kinase-like 3 [Source:RGD Symbol%3BAcc:619874]
rn6_v1_chr1_-_192025350_192025350	0.0128146	Rfx3_Rfx1_Rfx4	ENSRNOT00000071946|Ears2|ENSRNOG00000025353|glutamyl-tRNA synthetase 2%2C mitochondrial [Source:RGD Symbol%3BAcc:1307904]
rn6_v1_chr1_+_79981355_79981355	0.0126893	Rfx3_Rfx1_Rfx4	ENSRNOT00000020134|Dmwd|ENSRNOG00000014984|dystrophia myotonica%2C WD repeat containing [Source:RGD Symbol%3BAcc:1594179]
rn6_v1_chr6_+_86713803_86713803	0.0126379	Rfx3_Rfx1_Rfx4	ENSRNOT00000005861|Fam179b|ENSRNOG00000004415|family with sequence similarity 179%2C member B [Source:RGD Symbol%3BAcc:1310474]
rn6_v1_chr6_-_7741414_7741414	0.0124172	Rfx3_Rfx1_Rfx4	ENSRNOT00000038246|Thada|ENSRNOG00000025899|THADA%2C armadillo repeat containing [Source:RGD Symbol%3BAcc:1560519]
rn6_v1_chr6_+_36089433_36089475	0.0122418	Rfx3_Rfx1_Rfx4	ENSRNOT00000090438|Nt5c1b|ENSRNOG00000004296|5'-nucleotidase%2C cytosolic IB [Source:RGD Symbol%3BAcc:1309705]	ENSRNOT00000005731|Nt5c1b|ENSRNOG00000004296|5'-nucleotidase%2C cytosolic IB [Source:RGD Symbol%3BAcc:1309705]
rn6_v1_chr11_-_31103520_31103520	0.011698	Rfx3_Rfx1_Rfx4	ENSRNOT00000030279|RGD1306954|ENSRNOG00000021399|similar to RIKEN cDNA 1110004E09 [Source:RGD Symbol%3BAcc:1306954]
rn6_v1_chr19_+_56136904_56136904	0.0114754	Rfx3_Rfx1_Rfx4	ENSRNOT00000022823|Spire2|ENSRNOG00000016920|spire-type actin nucleation factor 2 [Source:RGD Symbol%3BAcc:1305837]
rn6_v1_chr12_-_30106889_30106893	0.011421	Rfx3_Rfx1_Rfx4	ENSRNOT00000065868|Tpst1|ENSRNOG00000000900|tyrosylprotein sulfotransferase 1 [Source:RGD Symbol%3BAcc:1308473]	ENSRNOT00000001200|Tpst1|ENSRNOG00000000900|tyrosylprotein sulfotransferase 1 [Source:RGD Symbol%3BAcc:1308473]
rn6_v1_chr1_-_100559942_100559942	0.0112614	Rfx3_Rfx1_Rfx4	ENSRNOT00000026862|Nr1h2|ENSRNOG00000019812|nuclear receptor subfamily 1%2C group H%2C member 2 [Source:RGD Symbol%3BAcc:61906]
rn6_v1_chr10_-_19164505_19164505	0.0112079	Rfx3_Rfx1_Rfx4	ENSRNOT00000009058|Foxi1|ENSRNOG00000006293|forkhead box I1 [Source:RGD Symbol%3BAcc:1307421]
rn6_v1_chr3_+_132052612_132052612	0.0110067	Rfx3_Rfx1_Rfx4	ENSRNOT00000030148|AABR07053879.1|ENSRNOG00000027574|
rn6_v1_chr14_-_7863664_7863664	0.0107185	Rfx3_Rfx1_Rfx4	ENSRNOT00000061162|Ptpn13|ENSRNOG00000002061|protein tyrosine phosphatase%2C non-receptor type 13 [Source:RGD Symbol%3BAcc:1563360]
rn6_v1_chr14_-_80355420_80355420	0.010522	Rfx3_Rfx1_Rfx4	ENSRNOT00000049798|Acox3|ENSRNOG00000008474|acyl-CoA oxidase 3%2C pristanoyl [Source:RGD Symbol%3BAcc:69245]
rn6_v1_chr2_+_61991742_61991742	0.0100771	Rfx3_Rfx1_Rfx4	ENSRNOT00000046715|LOC499544|ENSRNOG00000030204|LRRGT00154 [Source:RGD Symbol%3BAcc:1560001]
rn6_v1_chr20_-_32211453_32211453	0.00992952	Rfx3_Rfx1_Rfx4	ENSRNOT00000000444|Kif1bp|ENSRNOG00000000395|KIF1 binding protein [Source:RGD Symbol%3BAcc:1593126]
rn6_v1_chr10_+_70520206_70520279	0.00983945	Rfx3_Rfx1_Rfx4	ENSRNOT00000088198|Ap2b1|ENSRNOG00000061543|adaptor-related protein complex 2%2C beta 1 subunit [Source:RGD Symbol%3BAcc:71048]	ENSRNOT00000090446|Ap2b1|ENSRNOG00000061543|adaptor-related protein complex 2%2C beta 1 subunit [Source:RGD Symbol%3BAcc:71048]	ENSRNOT00000085799|Ap2b1|ENSRNOG00000061543|adaptor-related protein complex 2%2C beta 1 subunit [Source:RGD Symbol%3BAcc:71048]
rn6_v1_chrX_-_15461713_15461713	0.00982936	Rfx3_Rfx1_Rfx4	ENSRNOT00000063952|Slc35a2|ENSRNOG00000024801|solute carrier family 35 member A2 [Source:RGD Symbol%3BAcc:2293497]
rn6_v1_chr3_+_129018592_129018592	0.0097577	Rfx3_Rfx1_Rfx4	ENSRNOT00000007274|Lamp5|ENSRNOG00000005457|lysosomal-associated membrane protein family%2C member 5 [Source:RGD Symbol%3BAcc:1306991]
rn6_v1_chr15_-_34314345_34314345	0.009592	Rfx3_Rfx1_Rfx4	ENSRNOT00000026552|Ipo4|ENSRNOG00000019553|importin 4 [Source:RGD Symbol%3BAcc:1305206]
rn6_v1_chr3_+_172692452_172692452	0.00944453	Rfx3_Rfx1_Rfx4	ENSRNOT00000077193|Zfp831|ENSRNOG00000024693|zinc finger protein 831 [Source:RGD Symbol%3BAcc:1565819]
rn6_v1_chr1_-_274107138_274107138	0.00943151	Rfx3_Rfx1_Rfx4	ENSRNOT00000078670|Smndc1|ENSRNOG00000014833|survival motor neuron domain containing 1 [Source:RGD Symbol%3BAcc:1309151]
rn6_v1_chr1_+_221424383_221424383	0.00911907	Rfx3_Rfx1_Rfx4	ENSRNOT00000028482|Znhit2|ENSRNOG00000021794|zinc finger%2C HIT-type containing 2 [Source:RGD Symbol%3BAcc:1307918]
rn6_v1_chr1_-_141481315_141481315	0.00900866	Rfx3_Rfx1_Rfx4	ENSRNOT00000020229|Pex11a|ENSRNOG00000015003|peroxisomal biogenesis factor 11 alpha [Source:RGD Symbol%3BAcc:619842]
rn6_v1_chr6_-_125590049_125590049	0.00889352	Rfx3_Rfx1_Rfx4	ENSRNOT00000006371|Tc2n|ENSRNOG00000004754|tandem C2 domains%2C nuclear [Source:RGD Symbol%3BAcc:1563876]
rn6_v1_chr14_-_45165207_45165207	0.00843261	Rfx3_Rfx1_Rfx4	ENSRNOT00000002960|Klf3|ENSRNOG00000002163|Kruppel like factor 3 [Source:RGD Symbol%3BAcc:1593290]
rn6_v1_chr13_+_90909486_90909486	0.0081013	Rfx3_Rfx1_Rfx4	ENSRNOT00000011450|Cfap45|ENSRNOG00000008492|cilia and flagella associated protein 45 [Source:RGD Symbol%3BAcc:1561559]
rn6_v1_chr2_+_205160405_205160405	0.00801583	Rfx3_Rfx1_Rfx4	ENSRNOT00000035605|Tspan2|ENSRNOG00000023338|tetraspanin 2 [Source:RGD Symbol%3BAcc:620982]
rn6_v1_chr16_-_19308842_19308842	0.00790919	Rfx3_Rfx1_Rfx4	ENSRNOT00000019556|Fam32a|ENSRNOG00000039528|family with sequence similarity 32%2C member A [Source:RGD Symbol%3BAcc:1561287]
rn6_v1_chr1_-_22559830_22559830	0.00787629	Rfx3_Rfx1_Rfx4	ENSRNOT00000047810|Taar4|ENSRNOG00000029877|trace amine-associated receptor 4 [Source:RGD Symbol%3BAcc:631382]
rn6_v1_chr1_+_213636093_213636093	0.00764981	Rfx3_Rfx1_Rfx4	ENSRNOT00000019642|Psmd13|ENSRNOG00000014109|proteasome 26S subunit%2C non-ATPase 13 [Source:RGD Symbol%3BAcc:1305236]
rn6_v1_chr1_+_81413353_81413353	0.00747963	Rfx3_Rfx1_Rfx4	ENSRNOT00000027057|Xrcc1|ENSRNOG00000019915|X-ray repair cross complementing 1 [Source:RGD Symbol%3BAcc:619823]
rn6_v1_chr1_-_65611815_65611815	0.00716216	Rfx3_Rfx1_Rfx4	ENSRNOT00000036874|Zfp324|ENSRNOG00000027436|zinc finger protein 324 [Source:RGD Symbol%3BAcc:1306631]
rn6_v1_chr2_+_42726809_42726809	0.00715778	Rfx3_Rfx1_Rfx4	ENSRNOT00000036860|AABR07008097.1|ENSRNOG00000026928|
rn6_v1_chr10_-_85636902_85636902	0.00634928	Rfx3_Rfx1_Rfx4	ENSRNOT00000017241|Pcgf2|ENSRNOG00000012705|polycomb group ring finger 2 [Source:RGD Symbol%3BAcc:1305097]
rn6_v1_chr10_-_88533829_88533829	0.00632867	Rfx3_Rfx1_Rfx4	ENSRNOT00000080521|Dnajc7|ENSRNOG00000017781|DnaJ heat shock protein family (Hsp40) member C7 [Source:RGD Symbol%3BAcc:1303226]
rn6_v1_chr12_-_22726982_22726982	0.00540972	Rfx3_Rfx1_Rfx4	ENSRNOT00000001921|Plod3|ENSRNOG00000001417|procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3 [Source:RGD Symbol%3BAcc:631339]
rn6_v1_chr4_-_99546488_99546488	0.0050571	Rfx3_Rfx1_Rfx4	ENSRNOT00000045279|Kdm3a|ENSRNOG00000007814|lysine demethylase 3A [Source:RGD Symbol%3BAcc:708351]
rn6_v1_chr7_-_30274984_30274984	0.00464257	Rfx3_Rfx1_Rfx4	ENSRNOT00000092527|Slc17a8|ENSRNOG00000007581|solute carrier family 17 member 8 [Source:RGD Symbol%3BAcc:628870]	ENSRNOT00000010207|Slc17a8|ENSRNOG00000007581|solute carrier family 17 member 8 [Source:RGD Symbol%3BAcc:628870]
rn6_v1_chr10_+_11240138_11240138	0.00452124	Rfx3_Rfx1_Rfx4	ENSRNOT00000048687|Srl|ENSRNOG00000005269|sarcalumenin [Source:RGD Symbol%3BAcc:1306564]
rn6_v1_chr10_+_43542697_43542697	0.0042941	Rfx3_Rfx1_Rfx4	ENSRNOT00000003555|Cnot8|ENSRNOG00000002630|CCR4-NOT transcription complex%2C subunit 8 [Source:RGD Symbol%3BAcc:1306401]
rn6_v1_chr20_+_27832932_27832932	0.00423549	Rfx3_Rfx1_Rfx4	ENSRNOT00000001092|Gcc2|ENSRNOG00000000823|GRIP and coiled-coil domain containing 2 [Source:RGD Symbol%3BAcc:1305732]
rn6_v1_chr1_-_127292090_127292090	0.00410572	Rfx3_Rfx1_Rfx4	ENSRNOT00000016959|Lrrk1|ENSRNOG00000012730|leucine-rich repeat kinase 1 [Source:RGD Symbol%3BAcc:1308000]
rn6_v1_chr4_+_149957206_149957206	0.00323451	Rfx3_Rfx1_Rfx4	ENSRNOT00000083843|Hnrnpf|ENSRNOG00000014562|heterogeneous nuclear ribonucleoprotein F [Source:RGD Symbol%3BAcc:620366]
rn6_v1_chr8_-_60752047_60752047	0.00313166	Rfx3_Rfx1_Rfx4	ENSRNOT00000048115|AABR07070238.2|ENSRNOG00000045767|
rn6_v1_chr1_-_265298797_265298797	0.00309183	Rfx3_Rfx1_Rfx4	ENSRNOT00000023137|Poll|ENSRNOG00000016748|DNA polymerase lambda [Source:RGD Symbol%3BAcc:1308053]
rn6_v1_chr1_-_142020525_142020525	0.00276692	Rfx3_Rfx1_Rfx4	ENSRNOT00000042558|Cib1|ENSRNOG00000033498|calcium and integrin binding 1 [Source:RGD Symbol%3BAcc:620133]
rn6_v1_chr3_-_161212188_161212188	0.00252774	Rfx3_Rfx1_Rfx4	ENSRNOT00000065751|Wfdc3|ENSRNOG00000042162|WAP four-disulfide core domain 3 [Source:RGD Symbol%3BAcc:1305295]
rn6_v1_chr1_-_264706476_264706476	0.00223849	Rfx3_Rfx1_Rfx4	ENSRNOT00000045446|AC121209.1|ENSRNOG00000036588|
rn6_v1_chr10_-_46206135_46206135	0.0022277	Rfx3_Rfx1_Rfx4	ENSRNOT00000091471|Cops3|ENSRNOG00000053943|COP9 signalosome subunit 3 [Source:RGD Symbol%3BAcc:1303002]
rn6_v1_chr13_+_100551307_100551307	0.0020993	Rfx3_Rfx1_Rfx4	ENSRNOT00000004297|Srp9|ENSRNOG00000003211|signal recognition particle 9 [Source:RGD Symbol%3BAcc:1597343]
rn6_v1_chr10_+_43601689_43601689	0.00185638	Rfx3_Rfx1_Rfx4	ENSRNOT00000029238|Mrpl22|ENSRNOG00000027039|mitochondrial ribosomal protein L22 [Source:RGD Symbol%3BAcc:1309277]
rn6_v1_chr13_-_89745835_89745835	0.00153054	Rfx3_Rfx1_Rfx4	ENSRNOT00000005352|Klhdc9|ENSRNOG00000004022|kelch domain containing 9 [Source:RGD Symbol%3BAcc:1561025]
rn6_v1_chr8_-_117382715_117382715	0.00135834	Rfx3_Rfx1_Rfx4	ENSRNOT00000027466|P4htm|ENSRNOG00000020249|prolyl 4-hydroxylase%2C transmembrane [Source:RGD Symbol%3BAcc:1311848]
rn6_v1_chr5_+_144106802_144106868	0.000972001	Rfx3_Rfx1_Rfx4	ENSRNOT00000035637|Lsm10|ENSRNOG00000025716|LSM10%2C U7 small nuclear RNA associated [Source:RGD Symbol%3BAcc:1584914]	ENSRNOT00000079779|Lsm10|ENSRNOG00000025716|LSM10%2C U7 small nuclear RNA associated [Source:RGD Symbol%3BAcc:1584914]
rn6_v1_chr2_-_39434560_39434560	0.000829749	Rfx3_Rfx1_Rfx4	ENSRNOT00000090193|Ndufaf2|ENSRNOG00000055079|NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:RGD Symbol%3BAcc:1560158]
rn6_v1_chr6_-_42312915_42312935	0.000530674	Rfx3_Rfx1_Rfx4	ENSRNOT00000033550|LOC690276|ENSRNOG00000024338|hypothetical protein LOC690276 [Source:RGD Symbol%3BAcc:1582838]	ENSRNOT00000081004|LOC690276|ENSRNOG00000024338|hypothetical protein LOC690276 [Source:RGD Symbol%3BAcc:1582838]
rn6_v1_chr8_+_117660964_117660964	0.000521376	Rfx3_Rfx1_Rfx4	ENSRNOT00000049240|Tmem89|ENSRNOG00000031141|transmembrane protein 89 [Source:RGD Symbol%3BAcc:1564575]
rn6_v1_chr20_-_45005035_45005035	0.000300792	Rfx3_Rfx1_Rfx4	ENSRNOT00000035047|Mfsd4b|ENSRNOG00000024543|major facilitator superfamily domain containing 4B [Source:RGD Symbol%3BAcc:1559971]
rn6_v1_chr10_-_78168609_78168609	0.000118502	Rfx3_Rfx1_Rfx4	ENSRNOT00000041119|Stxbp4|ENSRNOG00000032768|syntaxin binding protein 4 [Source:RGD Symbol%3BAcc:1307903]
