rn6_v1_chr2_-_187742747_187742747	0.326132	Runx1	ENSRNOT00000026530|Bglap|ENSRNOG00000019607|bone gamma-carboxyglutamate protein [Source:RGD Symbol%3BAcc:2206]
rn6_v1_chr10_-_85435016_85435016	0.280234	Runx1	ENSRNOT00000079921|4933428G20Rik|ENSRNOG00000055533|RIKEN cDNA 4933428G20 gene [Source:MGI Symbol%3BAcc:MGI:1918475]
rn6_v1_chr14_-_78902063_78902063	0.182496	Runx1	ENSRNOT00000088469|Ppp2r2c|ENSRNOG00000058202|protein phosphatase 2%2C regulatory subunit B%2C gamma [Source:RGD Symbol%3BAcc:620920]
rn6_v1_chr1_+_44311513_44311513	0.173934	Runx1	ENSRNOT00000065386|Tiam2|ENSRNOG00000016728|T-cell lymphoma invasion and metastasis 2 [Source:RGD Symbol%3BAcc:2324148]
rn6_v1_chr18_-_55916220_55916220	0.167705	Runx1	ENSRNOT00000025934|Synpo|ENSRNOG00000019181|synaptopodin [Source:RGD Symbol%3BAcc:620668]
rn6_v1_chr20_-_22459025_22459025	0.162035	Runx1	ENSRNOT00000000792|Egr2|ENSRNOG00000000640|early growth response 2 [Source:RGD Symbol%3BAcc:621608]
rn6_v1_chr10_-_38985466_38985466	0.146942	Runx1	ENSRNOT00000010121|Il13|ENSRNOG00000007652|interleukin 13 [Source:RGD Symbol%3BAcc:68949]
rn6_v1_chr13_-_83202864_83202864	0.13171	Runx1	ENSRNOT00000003976|Xcl1|ENSRNOG00000002964|X-C motif chemokine ligand 1 [Source:RGD Symbol%3BAcc:620452]
rn6_v1_chr9_-_15700235_15700312	0.126317	Runx1	ENSRNOT00000088713|Trerf1|ENSRNOG00000022598|transcriptional regulating factor 1 [Source:RGD Symbol%3BAcc:1307167]	ENSRNOT00000035907|Trerf1|ENSRNOG00000022598|transcriptional regulating factor 1 [Source:RGD Symbol%3BAcc:1307167]
rn6_v1_chr1_+_100577056_100577056	0.124472	Runx1	ENSRNOT00000026992|Napsa|ENSRNOG00000019854|napsin A aspartic peptidase [Source:RGD Symbol%3BAcc:61940]
rn6_v1_chr4_-_117126822_117126822	0.123107	Runx1	ENSRNOT00000086720|Rab11fip5|ENSRNOG00000056009|RAB11 family interacting protein 5 [Source:RGD Symbol%3BAcc:1592069]
rn6_v1_chr10_+_104582955_104582955	0.11495	Runx1	ENSRNOT00000009733|Unk|ENSRNOG00000006600|unkempt family zinc finger [Source:RGD Symbol%3BAcc:1309224]
rn6_v1_chr1_+_190666149_190666149	0.111463	Runx1	ENSRNOT00000089361|LOC102547219|ENSRNOG00000061899|uncharacterized LOC102547219 [Source:RGD Symbol%3BAcc:7606925]
rn6_v1_chr7_-_145450233_145450301	0.110615	Runx1	ENSRNOT00000092974|Calcoco1|ENSRNOG00000015447|calcium binding and coiled coil domain 1 [Source:RGD Symbol%3BAcc:619812]	ENSRNOT00000021523|Calcoco1|ENSRNOG00000015447|calcium binding and coiled coil domain 1 [Source:RGD Symbol%3BAcc:619812]
rn6_v1_chr16_+_46731403_46731403	0.106594	Runx1	ENSRNOT00000017624|Tenm3|ENSRNOG00000012802|teneurin transmembrane protein 3 [Source:RGD Symbol%3BAcc:1306641]
rn6_v1_chr1_-_226887156_226887156	0.106271	Runx1	ENSRNOT00000054809|Cd6|ENSRNOG00000020884|Cd6 molecule [Source:RGD Symbol%3BAcc:2312]	ENSRNOT00000028347|Cd6|ENSRNOG00000020884|Cd6 molecule [Source:RGD Symbol%3BAcc:2312]
rn6_v1_chrX_-_159841072_159841072	0.104598	Runx1	ENSRNOT00000001158|Arhgef6|ENSRNOG00000000869|Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:RGD Symbol%3BAcc:1359674]
rn6_v1_chr1_-_82004538_82004538	0.101941	Runx1	ENSRNOT00000087572|Pou2f2|ENSRNOG00000055650|POU class 2 homeobox 2 [Source:RGD Symbol%3BAcc:621690]
rn6_v1_chr14_-_6679878_6679901	0.100963	Runx1	ENSRNOT00000075989|Spp1|ENSRNOG00000043451|secreted phosphoprotein 1 [Source:RGD Symbol%3BAcc:3752]	ENSRNOT00000067875|Spp1|ENSRNOG00000043451|secreted phosphoprotein 1 [Source:RGD Symbol%3BAcc:3752]
rn6_v1_chr14_-_81399353_81399353	0.0994937	Runx1	ENSRNOT00000018340|Add1|ENSRNOG00000013039|adducin 1 [Source:RGD Symbol%3BAcc:2041]
rn6_v1_chr1_-_82003691_82003691	0.0991407	Runx1	ENSRNOT00000084569|Pou2f2|ENSRNOG00000055650|POU class 2 homeobox 2 [Source:RGD Symbol%3BAcc:621690]
rn6_v1_chr9_+_118849302_118849302	0.0977502	Runx1	ENSRNOT00000087592|Dlgap1|ENSRNOG00000016196|DLG associated protein 1 [Source:RGD Symbol%3BAcc:620223]
rn6_v1_chr5_+_151362019_151362064	0.094619	Runx1	ENSRNOT00000077083|Wasf2|ENSRNOG00000009805|WAS protein family%2C member 2 [Source:RGD Symbol%3BAcc:1307299]	ENSRNOT00000067801|Wasf2|ENSRNOG00000009805|WAS protein family%2C member 2 [Source:RGD Symbol%3BAcc:1307299]
rn6_v1_chr6_+_52631092_52631092	0.0926505	Runx1	ENSRNOT00000014054|Atxn7l1|ENSRNOG00000010415|ataxin 7-like 1 [Source:RGD Symbol%3BAcc:1305730]
rn6_v1_chr11_-_33003021_33003021	0.0914834	Runx1	ENSRNOT00000084134|Runx1|ENSRNOG00000001704|runt-related transcription factor 1 [Source:RGD Symbol%3BAcc:2283]
rn6_v1_chr13_+_70379346_70379346	0.090728	Runx1	ENSRNOT00000038183|Nmnat2|ENSRNOG00000027697|nicotinamide nucleotide adenylyltransferase 2 [Source:RGD Symbol%3BAcc:1307331]
rn6_v1_chr8_-_62987182_62987182	0.0875848	Runx1	ENSRNOT00000070885|Islr2|ENSRNOG00000050714|immunoglobulin superfamily containing leucine-rich repeat 2 [Source:RGD Symbol%3BAcc:6497037]
rn6_v1_chr4_-_40036563_40036563	0.0871701	Runx1	ENSRNOT00000084531|Tmem168|ENSRNOG00000057290|transmembrane protein 168 [Source:RGD Symbol%3BAcc:1307778]
rn6_v1_chr9_+_18564927_18564927	0.0854645	Runx1	ENSRNOT00000061014|Runx2|ENSRNOG00000020193|runt-related transcription factor 2 [Source:RGD Symbol%3BAcc:2282]
rn6_v1_chr5_+_25725683_25725683	0.0807397	Runx1	ENSRNOT00000087602|LOC679087|ENSRNOG00000055292|similar to swan [Source:RGD Symbol%3BAcc:1593040]
rn6_v1_chr4_-_155275161_155275161	0.0794578	Runx1	ENSRNOT00000032690|Rimklb|ENSRNOG00000023814|ribosomal modification protein rimK-like family member B [Source:RGD Symbol%3BAcc:1560851]
rn6_v1_chr9_+_71247781_71247781	0.0710666	Runx1	ENSRNOT00000049654|Creb1|ENSRNOG00000013412|cAMP responsive element binding protein 1 [Source:RGD Symbol%3BAcc:620218]
rn6_v1_chr8_-_47339343_47339343	0.0709157	Runx1	ENSRNOT00000081007|Arhgef12|ENSRNOG00000008924|Rho guanine nucleotide exchange factor 12 [Source:RGD Symbol%3BAcc:1305111]
rn6_v1_chr14_-_55081551_55081551	0.0686432	Runx1	ENSRNOT00000049245|Pcdh7|ENSRNOG00000012367|protocadherin 7 [Source:RGD Symbol%3BAcc:1303209]
rn6_v1_chr10_-_83655182_83655182	0.063666	Runx1	ENSRNOT00000007897|Abi3|ENSRNOG00000005575|ABI family%2C member 3 [Source:RGD Symbol%3BAcc:1311794]
rn6_v1_chr1_+_47032113_47032113	0.0631588	Runx1	ENSRNOT00000024412|Tulp4|ENSRNOG00000018012|tubby like protein 4 [Source:RGD Symbol%3BAcc:1564487]
rn6_v1_chr10_+_75087892_75087892	0.0603842	Runx1	ENSRNOT00000065910|Mpo|ENSRNOG00000008310|myeloperoxidase [Source:RGD Symbol%3BAcc:1592081]
rn6_v1_chr8_-_96266342_96266342	0.0557438	Runx1	ENSRNOT00000078891|Syncrip|ENSRNOG00000000204|synaptotagmin binding%2C cytoplasmic RNA interacting protein [Source:RGD Symbol%3BAcc:1305683]
rn6_v1_chr20_-_4508197_4508214	0.055511	Runx1	ENSRNOT00000086027|C4a|ENSRNOG00000000443|complement component 4A (Rodgers blood group) [Source:RGD Symbol%3BAcc:620005]	ENSRNOT00000000514|C4a|ENSRNOG00000000443|complement component 4A (Rodgers blood group) [Source:RGD Symbol%3BAcc:620005]
rn6_v1_chr2_+_116032455_116032455	0.0554189	Runx1	ENSRNOT00000066495|Phc3|ENSRNOG00000009491|polyhomeotic homolog 3 [Source:RGD Symbol%3BAcc:1307998]
rn6_v1_chr5_+_25253010_25253010	0.0548444	Runx1	ENSRNOT00000061333|Rbm12b|ENSRNOG00000016330|RNA binding motif protein 12B [Source:RGD Symbol%3BAcc:1307658]
rn6_v1_chr8_-_96132634_96132634	0.0534051	Runx1	ENSRNOT00000041655|Syncrip|ENSRNOG00000000204|synaptotagmin binding%2C cytoplasmic RNA interacting protein [Source:RGD Symbol%3BAcc:1305683]
rn6_v1_chr14_+_86828355_86828355	0.0511492	Runx1	ENSRNOT00000088611|Ccm2|ENSRNOG00000060825|CCM2 scaffolding protein [Source:RGD Symbol%3BAcc:1308067]
rn6_v1_chr10_-_65200109_65200109	0.0511028	Runx1	ENSRNOT00000030501|Nufip2|ENSRNOG00000024964|NUFIP2%2C FMR1 interacting protein 2 [Source:RGD Symbol%3BAcc:1596719]
rn6_v1_chr20_-_2678141_2678141	0.0510589	Runx1	ENSRNOT00000072377|C4a|ENSRNOG00000047657|complement component 4A (Rodgers blood group) [Source:RGD Symbol%3BAcc:620005]	ENSRNOT00000083833|C4a|ENSRNOG00000047657|complement component 4A (Rodgers blood group) [Source:RGD Symbol%3BAcc:620005]
rn6_v1_chr20_-_4316715_4316715	0.0495225	Runx1	ENSRNOT00000031704|C4b|ENSRNOG00000030729|complement C4B (Chido blood group) [Source:RGD Symbol%3BAcc:1591983]
rn6_v1_chr16_+_83824430_83824430	0.0489944	Runx1	ENSRNOT00000032918|Irs2|ENSRNOG00000023509|insulin receptor substrate 2 [Source:RGD Symbol%3BAcc:69316]
rn6_v1_chr2_-_210550490_210550560	0.0481637	Runx1	ENSRNOT00000081835|Csf1|ENSRNOG00000018659|colony stimulating factor 1 [Source:RGD Symbol%3BAcc:621063]	ENSRNOT00000025222|Csf1|ENSRNOG00000018659|colony stimulating factor 1 [Source:RGD Symbol%3BAcc:621063]	ENSRNOT00000086403|Csf1|ENSRNOG00000018659|colony stimulating factor 1 [Source:RGD Symbol%3BAcc:621063]
rn6_v1_chr9_+_67546408_67546408	0.0465171	Runx1	ENSRNOT00000013701|Cd28|ENSRNOG00000010283|Cd28 molecule [Source:RGD Symbol%3BAcc:2299]
rn6_v1_chr2_+_143475323_143475323	0.0443	Runx1	ENSRNOT00000044028|Trpc4|ENSRNOG00000011133|transient receptor potential cation channel%2C subfamily C%2C member 4 [Source:RGD Symbol%3BAcc:621276]	ENSRNOT00000015437|Trpc4|ENSRNOG00000011133|transient receptor potential cation channel%2C subfamily C%2C member 4 [Source:RGD Symbol%3BAcc:621276]
rn6_v1_chr4_+_65637407_65637407	0.0431232	Runx1	ENSRNOT00000047954|Trim24|ENSRNOG00000013251|tripartite motif-containing 24 [Source:RGD Symbol%3BAcc:1560596]
rn6_v1_chr1_-_219544328_219544328	0.0421863	Runx1	ENSRNOT00000025847|Grk2|ENSRNOG00000018985|G protein-coupled receptor kinase 2 [Source:RGD Symbol%3BAcc:2062]
rn6_v1_chr2_-_44981458_44981458	0.0408034	Runx1	ENSRNOT00000014134|Gzma|ENSRNOG00000010603|granzyme A [Source:RGD Symbol%3BAcc:628640]
rn6_v1_chr17_-_87826421_87826421	0.0406601	Runx1	ENSRNOT00000068156|Arhgap21|ENSRNOG00000008659|Rho GTPase activating protein 21 [Source:RGD Symbol%3BAcc:1311028]
rn6_v1_chr3_-_44177689_44177689	0.0375578	Runx1	ENSRNOT00000006387|Cytip|ENSRNOG00000004772|cytohesin 1 interacting protein [Source:RGD Symbol%3BAcc:1307990]
rn6_v1_chr1_+_79982639_79982639	0.036026	Runx1	ENSRNOT00000071916|Dmwd|ENSRNOG00000014984|dystrophia myotonica%2C WD repeat containing [Source:RGD Symbol%3BAcc:1594179]
rn6_v1_chr1_+_5240180_5240197	0.0343822	Runx1	ENSRNOT00000019893|Shprh|ENSRNOG00000014450|SNF2 histone linker PHD RING helicase [Source:RGD Symbol%3BAcc:1310342]	ENSRNOT00000088292|Shprh|ENSRNOG00000014450|SNF2 histone linker PHD RING helicase [Source:RGD Symbol%3BAcc:1310342]
rn6_v1_chr3_+_66673071_66673071	0.0342383	Runx1	ENSRNOT00000034769|Ppp1r1c|ENSRNOG00000024990|protein phosphatase 1%2C regulatory (inhibitor) subunit 1C [Source:RGD Symbol%3BAcc:1562095]
rn6_v1_chr2_+_205553163_205553163	0.0322393	Runx1	ENSRNOT00000039572|Nras|ENSRNOG00000023079|neuroblastoma RAS viral oncogene homolog [Source:RGD Symbol%3BAcc:3205]
rn6_v1_chr3_+_66673246_66673246	0.0318601	Runx1	ENSRNOT00000081338|Ppp1r1c|ENSRNOG00000024990|protein phosphatase 1%2C regulatory (inhibitor) subunit 1C [Source:RGD Symbol%3BAcc:1562095]
rn6_v1_chr9_-_81864202_81864202	0.0318292	Runx1	ENSRNOT00000084964|Zfp142|ENSRNOG00000022414|zinc finger protein 142 [Source:RGD Symbol%3BAcc:1309648]
rn6_v1_chr15_-_42947656_42947656	0.0286324	Runx1	ENSRNOT00000030007|Ptk2b|ENSRNOG00000027839|protein tyrosine kinase 2 beta [Source:RGD Symbol%3BAcc:628758]
rn6_v1_chr10_+_86950557_86950557	0.0279369	Runx1	ENSRNOT00000014153|Igfbp4|ENSRNOG00000010635|insulin-like growth factor binding protein 4 [Source:RGD Symbol%3BAcc:2875]
rn6_v1_chr2_-_203413124_203413125	0.0251495	Runx1	ENSRNOT00000077898|Cd101|ENSRNOG00000037190|CD101 molecule [Source:RGD Symbol%3BAcc:1311453]	ENSRNOT00000056140|Cd101|ENSRNOG00000037190|CD101 molecule [Source:RGD Symbol%3BAcc:1311453]
rn6_v1_chr1_+_167522895_167522895	0.0234735	Runx1	ENSRNOT00000092987|Stim1|ENSRNOG00000020425|stromal interaction molecule 1 [Source:RGD Symbol%3BAcc:1306831]
rn6_v1_chr15_-_27716008_27716008	0.021854	Runx1	ENSRNOT00000011741|Ttc5|ENSRNOG00000008850|tetratricopeptide repeat domain 5 [Source:RGD Symbol%3BAcc:1311284]
rn6_v1_chr3_+_104816987_104816987	0.0203582	Runx1	ENSRNOT00000042103|Fmn1|ENSRNOG00000031760|formin 1 [Source:RGD Symbol%3BAcc:1306349]	ENSRNOT00000044625|Fmn1|ENSRNOG00000031760|formin 1 [Source:RGD Symbol%3BAcc:1306349]
rn6_v1_chr8_-_40137390_40137390	0.0190285	Runx1	ENSRNOT00000042717|Panx3|ENSRNOG00000031675|pannexin 3 [Source:RGD Symbol%3BAcc:735137]
rn6_v1_chr1_+_192233910_192233910	0.0176664	Runx1	ENSRNOT00000016418|Prkcb|ENSRNOG00000012061|protein kinase C%2C beta [Source:RGD Symbol%3BAcc:3396]	ENSRNOT00000016442|Prkcb|ENSRNOG00000012061|protein kinase C%2C beta [Source:RGD Symbol%3BAcc:3396]
rn6_v1_chr7_+_140464999_140464999	0.0174554	Runx1	ENSRNOT00000090156|Wnt1|ENSRNOG00000061818|wingless-type MMTV integration site family%2C member 1 [Source:RGD Symbol%3BAcc:1597195]
rn6_v1_chr1_-_87825333_87825333	0.0160088	Runx1	ENSRNOT00000072689|Zfp74|ENSRNOG00000046937|zinc finger protein 74 [Source:RGD Symbol%3BAcc:1563223]
rn6_v1_chr7_-_76294663_76294663	0.0138671	Runx1	ENSRNOT00000064513|Ncald|ENSRNOG00000042978|neurocalcin delta [Source:RGD Symbol%3BAcc:1560287]
rn6_v1_chr11_+_88122271_88122271	0.0131821	Runx1	ENSRNOT00000002540|Sdf2l1|ENSRNOG00000001859|stromal cell-derived factor 2-like 1 [Source:RGD Symbol%3BAcc:1585844]
rn6_v1_chr11_+_44001579_44001579	0.0131172	Runx1	ENSRNOT00000002258|Gpr15|ENSRNOG00000039680|G protein-coupled receptor 15 [Source:RGD Symbol%3BAcc:1306639]
rn6_v1_chr3_-_146491837_146491837	0.012803	Runx1	ENSRNOT00000061469|Vsx1|ENSRNOG00000042220|visual system homeobox 1 [Source:RGD Symbol%3BAcc:1305667]
rn6_v1_chr19_+_10024947_10024947	0.0116044	Runx1	ENSRNOT00000061392|Cfap20|ENSRNOG00000042179|cilia and flagella associated protein 20 [Source:RGD Symbol%3BAcc:1308493]
rn6_v1_chr7_-_62162453_62162453	0.0107289	Runx1	ENSRNOT00000010720|Cand1|ENSRNOG00000007834|cullin-associated and neddylation-dissociated 1 [Source:RGD Symbol%3BAcc:620479]
rn6_v1_chr1_-_88240057_88240057	0.0102931	Runx1	ENSRNOT00000073092|LOC103690038|ENSRNOG00000048894|zinc finger protein 569 [Source:RGD Symbol%3BAcc:9235705]
rn6_v1_chr3_+_170399302_170399302	0.00704362	Runx1	ENSRNOT00000035245|Cass4|ENSRNOG00000021560|Cas scaffolding protein family member 4 [Source:RGD Symbol%3BAcc:1310643]
rn6_v1_chr3_+_79729739_79729739	0.00624979	Runx1	ENSRNOT00000084833|Kbtbd4|ENSRNOG00000009397|kelch repeat and BTB domain containing 4 [Source:RGD Symbol%3BAcc:1310234]
rn6_v1_chr4_-_184096806_184096806	0.00315417	Runx1	ENSRNOT00000055433|LOC100362344|ENSRNOG00000036910|mKIAA1238 protein-like [Source:RGD Symbol%3BAcc:2318342]
rn6_v1_chr7_+_121930615_121930638	0.00267757	Runx1	ENSRNOT00000091270|Tnrc6b|ENSRNOG00000024907|trinucleotide repeat containing 6B [Source:RGD Symbol%3BAcc:621428]	ENSRNOT00000033975|Tnrc6b|ENSRNOG00000024907|trinucleotide repeat containing 6B [Source:RGD Symbol%3BAcc:621428]
rn6_v1_chr6_+_109562587_109562587	0.00107872	Runx1	ENSRNOT00000011563|Batf|ENSRNOG00000008588|basic leucine zipper ATF-like transcription factor [Source:RGD Symbol%3BAcc:1304923]
rn6_v1_chr7_-_144880092_144880092	0.00073929	Runx1	ENSRNOT00000055281|Nfe2|ENSRNOG00000036837|nuclear factor%2C erythroid 2 [Source:RGD Symbol%3BAcc:1306888]
