rn6_v1_chr10_+_59533480_59533480	0.37721	Runx3	ENSRNOT00000087723|Atp2a3|ENSRNOG00000017912|ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:RGD Symbol%3BAcc:2175]
rn6_v1_chr1_-_72339395_72339395	0.328362	Runx3	ENSRNOT00000021772|Zfp580|ENSRNOG00000016274|zinc finger protein 580 [Source:RGD Symbol%3BAcc:1306892]
rn6_v1_chr4_-_170763916_170763916	0.192798	Runx3	ENSRNOT00000071512|Hist1h4m|ENSRNOG00000045840|histone cluster 1%2C H4m [Source:RGD Symbol%3BAcc:1306905]
rn6_v1_chr1_+_197659187_197659187	0.188781	Runx3	ENSRNOT00000082228|LOC103690016|ENSRNOG00000057696|serine/threonine-protein kinase SBK1 [Source:RGD Symbol%3BAcc:9439246]
rn6_v1_chr20_+_4966817_4966817	0.164817	Runx3	ENSRNOT00000081527|Lsm2|ENSRNOG00000048725|LSM2 homolog%2C U6 small nuclear RNA and mRNA degradation associated [Source:RGD Symbol%3BAcc:1598536]	ENSRNOT00000081265|Lsm2|ENSRNOG00000048725|LSM2 homolog%2C U6 small nuclear RNA and mRNA degradation associated [Source:RGD Symbol%3BAcc:1598536]
rn6_v1_chr20_+_4822935_4822935	0.138894	Runx3	ENSRNOT00000077200|Nfkbil1|ENSRNOG00000000839|NFKB inhibitor like 1 [Source:RGD Symbol%3BAcc:1303310]
rn6_v1_chr5_+_137371825_137371825	0.119525	Runx3	ENSRNOT00000072816|Tmem125|ENSRNOG00000045872|transmembrane protein 125 [Source:RGD Symbol%3BAcc:1311937]
rn6_v1_chr20_-_3386048_3386106	0.115001	Runx3	ENSRNOT00000089550|Dhx16|ENSRNOG00000030157|DEAH-box helicase 16 [Source:RGD Symbol%3BAcc:1302963]	ENSRNOT00000065025|Dhx16|ENSRNOG00000030157|DEAH-box helicase 16 [Source:RGD Symbol%3BAcc:1302963]
rn6_v1_chr2_+_116372519_116372519	0.106992	Runx3	ENSRNOT00000031730|Lrrc34|ENSRNOG00000027935|leucine rich repeat containing 34 [Source:RGD Symbol%3BAcc:1565052]
rn6_v1_chr3_+_45683993_45683993	0.0987434	Runx3	ENSRNOT00000038983|Tanc1|ENSRNOG00000025394|tetratricopeptide repeat%2C ankyrin repeat and coiled-coil containing 1 [Source:RGD Symbol%3BAcc:1302949]
rn6_v1_chr2_+_225827504_225827504	0.0959325	Runx3	ENSRNOT00000018343|Gclm|ENSRNOG00000013409|glutamate cysteine ligase%2C modifier subunit [Source:RGD Symbol%3BAcc:619871]
rn6_v1_chr12_+_36638457_36638457	0.0933828	Runx3	ENSRNOT00000085692|Ubc|ENSRNOG00000057823|ubiquitin C [Source:RGD Symbol%3BAcc:621244]
rn6_v1_chr4_-_170092848_170092848	0.081051	Runx3	ENSRNOT00000072147|Hist2h4|ENSRNOG00000048735|histone cluster 2%2C H4 [Source:RGD Symbol%3BAcc:1307448]
rn6_v1_chrX_-_32355296_32355307	0.0795877	Runx3	ENSRNOT00000081652|Ap1s2|ENSRNOG00000038686|adaptor-related protein complex 1%2C sigma 2 subunit [Source:RGD Symbol%3BAcc:1561862]	ENSRNOT00000065075|Ap1s2|ENSRNOG00000038686|adaptor-related protein complex 1%2C sigma 2 subunit [Source:RGD Symbol%3BAcc:1561862]
rn6_v1_chr10_-_15667955_15668022	0.0750148	Runx3	ENSRNOT00000085746|Mpg|ENSRNOG00000020571|N-methylpurine-DNA glycosylase [Source:RGD Symbol%3BAcc:3106]	ENSRNOT00000027940|Mpg|ENSRNOG00000020571|N-methylpurine-DNA glycosylase [Source:RGD Symbol%3BAcc:3106]
rn6_v1_chr4_-_170117325_170117325	0.0735918	Runx3	ENSRNOT00000074198|LOC100912564|ENSRNOG00000048642|histone H4-like [Source:RGD Symbol%3BAcc:6486282]
rn6_v1_chr4_-_170145262_170145262	0.0696934	Runx3	ENSRNOT00000074526|Hist1h4b|ENSRNOG00000045978|histone cluster 1%2C H4b [Source:RGD Symbol%3BAcc:620814]
rn6_v1_chr1_-_255376833_255376833	0.0673594	Runx3	ENSRNOT00000024941|Ppp1r3c|ENSRNOG00000018494|protein phosphatase 1%2C regulatory subunit 3C [Source:RGD Symbol%3BAcc:1309132]
rn6_v1_chr8_-_116872215_116872215	0.0626072	Runx3	ENSRNOT00000045410|Apeh|ENSRNOG00000029572|acylaminoacyl-peptide hydrolase [Source:RGD Symbol%3BAcc:2125]
rn6_v1_chr7_-_120077612_120077612	0.0621293	Runx3	ENSRNOT00000011750|Lgals2|ENSRNOG00000008539|galectin 2 [Source:RGD Symbol%3BAcc:621269]
rn6_v1_chr9_-_43139870_43139870	0.0592458	Runx3	ENSRNOT00000021956|Sema4c|ENSRNOG00000016254|semaphorin 4C [Source:RGD Symbol%3BAcc:1562837]
rn6_v1_chr10_+_48240127_48240127	0.0588215	Runx3	ENSRNOT00000080682|Specc1|ENSRNOG00000002903|sperm antigen with calponin homology and coiled-coil domains 1 [Source:RGD Symbol%3BAcc:1309718]
rn6_v1_chr14_-_86117578_86117578	0.056865	Runx3	ENSRNOT00000019288|Pold2|ENSRNOG00000014098|DNA polymerase delta 2%2C accessory subunit [Source:RGD Symbol%3BAcc:1304954]
rn6_v1_chr1_-_88558387_88558387	0.0517389	Runx3	ENSRNOT00000074174|AABR07002896.1|ENSRNOG00000047627|
rn6_v1_chr2_-_210934749_210934749	0.0494359	Runx3	ENSRNOT00000026710|Gnai3|ENSRNOG00000019465|G protein subunit alpha i3 [Source:RGD Symbol%3BAcc:2714]
rn6_v1_chr10_+_48240330_48240330	0.0492074	Runx3	ENSRNOT00000057798|Specc1|ENSRNOG00000002903|sperm antigen with calponin homology and coiled-coil domains 1 [Source:RGD Symbol%3BAcc:1309718]
rn6_v1_chr15_+_47293699_47293699	0.0488286	Runx3	ENSRNOT00000016503|Sox7|ENSRNOG00000012049|SRY box 7 [Source:RGD Symbol%3BAcc:1310038]
rn6_v1_chr1_-_142114634_142114634	0.048376	Runx3	ENSRNOT00000029471|Rccd1|ENSRNOG00000042059|RCC1 domain containing 1 [Source:RGD Symbol%3BAcc:1309901]
rn6_v1_chr13_+_110372164_110372164	0.0471803	Runx3	ENSRNOT00000049634|RGD1560186|ENSRNOG00000031098|similar to ribosomal protein L37 [Source:RGD Symbol%3BAcc:1560186]
rn6_v1_chr10_-_56409017_56409017	0.0458702	Runx3	ENSRNOT00000020152|Fgf11|ENSRNOG00000014882|fibroblast growth factor 11 [Source:RGD Symbol%3BAcc:620162]
rn6_v1_chr16_-_69195097_69195097	0.0452753	Runx3	ENSRNOT00000018973|Erlin2|ENSRNOG00000013763|ER lipid raft associated 2 [Source:RGD Symbol%3BAcc:1309010]
rn6_v1_chr7_+_141380322_141380322	0.0436417	Runx3	ENSRNOT00000091207|Cox14|ENSRNOG00000061425|COX14%2C cytochrome c oxidase assembly factor [Source:RGD Symbol%3BAcc:1598052]
rn6_v1_chr10_+_11046221_11046221	0.0432303	Runx3	ENSRNOT00000005109|Nmral1|ENSRNOG00000003794|NmrA like redox sensor 1 [Source:RGD Symbol%3BAcc:1311451]
rn6_v1_chr10_+_11046024_11046024	0.0432113	Runx3	ENSRNOT00000084850|Nmral1|ENSRNOG00000003794|NmrA like redox sensor 1 [Source:RGD Symbol%3BAcc:1311451]
rn6_v1_chr1_+_220416018_220416018	0.0422654	Runx3	ENSRNOT00000027233|B4gat1|ENSRNOG00000020110|beta-1%2C4-glucuronyltransferase 1 [Source:RGD Symbol%3BAcc:1309541]
rn6_v1_chrX_+_63343724_63343751	0.0421212	Runx3	ENSRNOT00000076530|Klhl15|ENSRNOG00000006515|kelch-like family member 15 [Source:RGD Symbol%3BAcc:1563101]	ENSRNOT00000008558|Klhl15|ENSRNOG00000006515|kelch-like family member 15 [Source:RGD Symbol%3BAcc:1563101]
rn6_v1_chr8_+_76422359_76422359	0.0421021	Runx3	ENSRNOT00000084148|Gtf2a2|ENSRNOG00000056701|general transcription factor2A subunit 2 [Source:RGD Symbol%3BAcc:620720]
rn6_v1_chr2_-_181900856_181900856	0.0412956	Runx3	ENSRNOT00000082156|Lrat|ENSRNOG00000025608|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) [Source:RGD Symbol%3BAcc:68362]
rn6_v1_chr5_-_139505065_139505065	0.0403306	Runx3	ENSRNOT00000013899|Ctps1|ENSRNOG00000009963|CTP synthase 1 [Source:RGD Symbol%3BAcc:1311060]
rn6_v1_chr12_+_2228670_2228670	0.0395426	Runx3	ENSRNOT00000001327|Trappc5|ENSRNOG00000001003|trafficking protein particle complex 5 [Source:RGD Symbol%3BAcc:1563971]
rn6_v1_chr4_+_22898527_22898527	0.0393383	Runx3	ENSRNOT00000072455|Dbf4|ENSRNOG00000050482|DBF4 zinc finger [Source:RGD Symbol%3BAcc:1305854]	ENSRNOT00000076123|Dbf4|ENSRNOG00000050482|DBF4 zinc finger [Source:RGD Symbol%3BAcc:1305854]
rn6_v1_chr1_+_140477868_140477868	0.0388583	Runx3	ENSRNOT00000025008|Mrps11|ENSRNOG00000018531|mitochondrial ribosomal protein S11 [Source:RGD Symbol%3BAcc:1559901]
rn6_v1_chrX_+_63343546_63343546	0.0384889	Runx3	ENSRNOT00000076315|Klhl15|ENSRNOG00000006515|kelch-like family member 15 [Source:RGD Symbol%3BAcc:1563101]
rn6_v1_chr10_+_63677396_63677396	0.0381109	Runx3	ENSRNOT00000005100|Slc43a2|ENSRNOG00000003835|solute carrier family 43 member 2 [Source:RGD Symbol%3BAcc:1305819]
rn6_v1_chrX_+_157353577_157353577	0.0380229	Runx3	ENSRNOT00000090596|Haus7|ENSRNOG00000055648|HAUS augmin-like complex%2C subunit 7 [Source:RGD Symbol%3BAcc:1562991]
rn6_v1_chr4_+_119680112_119680112	0.0375977	Runx3	ENSRNOT00000013282|Gp9|ENSRNOG00000010015|glycoprotein IX (platelet) [Source:RGD Symbol%3BAcc:1561601]
rn6_v1_chr3_-_10161989_10161989	0.0374092	Runx3	ENSRNOT00000012312|Exosc2|ENSRNOG00000009245|exosome component 2 [Source:RGD Symbol%3BAcc:1306573]
rn6_v1_chr14_+_108412152_108412152	0.0356773	Runx3	ENSRNOT00000083707|Pus10|ENSRNOG00000054151|pseudouridylate synthase 10 [Source:RGD Symbol%3BAcc:1306402]
rn6_v1_chr7_-_113937941_113937941	0.0342794	Runx3	ENSRNOT00000012408|Kcnk9|ENSRNOG00000009265|potassium two pore domain channel subfamily K member 9 [Source:RGD Symbol%3BAcc:621451]
rn6_v1_chr4_+_100209951_100209951	0.031861	Runx3	ENSRNOT00000015807|LOC691113|ENSRNOG00000011713|hypothetical protein LOC691113 [Source:RGD Symbol%3BAcc:1587471]
rn6_v1_chr9_+_10995198_10995198	0.0297774	Runx3	ENSRNOT00000089071|Ubxn6|ENSRNOG00000048509|UBX domain protein 6 [Source:RGD Symbol%3BAcc:1590866]
rn6_v1_chr8_-_21915716_21915716	0.0297769	Runx3	ENSRNOT00000027985|Eif3g|ENSRNOG00000020619|eukaryotic translation initiation factor 3%2C subunit G [Source:RGD Symbol%3BAcc:1307191]
rn6_v1_chr8_-_7426611_7426611	0.0297021	Runx3	ENSRNOT00000031492|Arhgap42|ENSRNOG00000026821|Rho GTPase activating protein 42 [Source:RGD Symbol%3BAcc:1564081]
rn6_v1_chrX_+_123912361_123912361	0.0293669	Runx3	ENSRNOT00000092622|Rhox5|ENSRNOG00000046548|reproductive homeobox 5 [Source:RGD Symbol%3BAcc:3295]
rn6_v1_chr3_+_138765027_138765027	0.0291054	Runx3	ENSRNOT00000055588|RGD1566320|ENSRNOG00000036971|RGD1566320 [Source:RGD Symbol%3BAcc:1566320]
rn6_v1_chr14_-_16979760_16979760	0.0275998	Runx3	ENSRNOT00000003020|Stbd1|ENSRNOG00000002218|starch binding domain 1 [Source:RGD Symbol%3BAcc:1311800]
rn6_v1_chr2_+_210034095_210034095	0.0257698	Runx3	ENSRNOT00000024473|Lamtor5|ENSRNOG00000018186|late endosomal/lysosomal adaptor%2C MAPK and MTOR activator 5 [Source:RGD Symbol%3BAcc:1305005]
rn6_v1_chr7_+_130431213_130431213	0.0257059	Runx3	ENSRNOT00000055792|Mapk8ip2|ENSRNOG00000032828|mitogen-activated protein kinase 8 interacting protein 2 [Source:RGD Symbol%3BAcc:1309727]
rn6_v1_chr6_+_107245820_107245820	0.0250749	Runx3	ENSRNOT00000012757|Papln|ENSRNOG00000009448|papilin%2C proteoglycan-like sulfated glycoprotein [Source:RGD Symbol%3BAcc:1311176]
rn6_v1_chr1_-_72468738_72468738	0.0235685	Runx3	ENSRNOT00000029136|Zfp628|ENSRNOG00000038622|zinc finger protein 628 [Source:RGD Symbol%3BAcc:2323809]
rn6_v1_chr1_-_204855627_204855627	0.0231663	Runx3	ENSRNOT00000023121|Mettl10|ENSRNOG00000017137|methyltransferase like 10 [Source:RGD Symbol%3BAcc:1306300]
rn6_v1_chr12_+_8725517_8725517	0.0231415	Runx3	ENSRNOT00000001243|Slc46a3|ENSRNOG00000000937|solute carrier family 46%2C member 3 [Source:RGD Symbol%3BAcc:1307594]
rn6_v1_chr9_-_61418679_61418679	0.0218301	Runx3	ENSRNOT00000078800|Ankrd44|ENSRNOG00000021384|ankyrin repeat domain 44 [Source:RGD Symbol%3BAcc:1561893]
rn6_v1_chr1_+_220322940_220322940	0.021696	Runx3	ENSRNOT00000074972|LOC108348085|ENSRNOG00000046904|beta-1%2C4-glucuronyltransferase 1 [Source:RGD Symbol%3BAcc:11379422]
rn6_v1_chr12_-_22417980_22417980	0.0216498	Runx3	ENSRNOT00000072208|Ephb4|ENSRNOG00000045952|EPH receptor B4 [Source:RGD Symbol%3BAcc:1583193]
rn6_v1_chr19_+_43251539_43251539	0.020912	Runx3	ENSRNOT00000024793|Ddx19a|ENSRNOG00000018033|DEAD-box helicase 19A [Source:RGD Symbol%3BAcc:1303136]
rn6_v1_chr8_+_118013612_118013612	0.0206862	Runx3	ENSRNOT00000056166|Map4|ENSRNOG00000020748|microtubule-associated protein 4 [Source:RGD Symbol%3BAcc:1564359]
rn6_v1_chr4_+_149908375_149908375	0.0202217	Runx3	ENSRNOT00000019504|LOC100909657|ENSRNOG00000014552|uncharacterized LOC100909657 [Source:RGD Symbol%3BAcc:6502210]
rn6_v1_chr9_+_10995548_10995548	0.0197638	Runx3	ENSRNOT00000070986|Ubxn6|ENSRNOG00000048509|UBX domain protein 6 [Source:RGD Symbol%3BAcc:1590866]
rn6_v1_chr17_+_53956203_53956203	0.0187819	Runx3	ENSRNOT00000022483|Ggps1|ENSRNOG00000016767|geranylgeranyl diphosphate synthase 1 [Source:RGD Symbol%3BAcc:1359680]
rn6_v1_chr13_+_78979321_78979321	0.0186265	Runx3	ENSRNOT00000003857|Ankrd45|ENSRNOG00000002890|ankyrin repeat domain 45 [Source:RGD Symbol%3BAcc:1311153]
rn6_v1_chr17_+_27496353_27496472	0.017846	Runx3	ENSRNOT00000077994|Ssr1|ENSRNOG00000014165|signal sequence receptor subunit 1 [Source:RGD Symbol%3BAcc:1310961]	ENSRNOT00000019040|Ssr1|ENSRNOG00000014165|signal sequence receptor subunit 1 [Source:RGD Symbol%3BAcc:1310961]	ENSRNOT00000089736|Ssr1|ENSRNOG00000014165|signal sequence receptor subunit 1 [Source:RGD Symbol%3BAcc:1310961]
rn6_v1_chr6_-_115352681_115352681	0.0169218	Runx3	ENSRNOT00000005873|Gtf2a1|ENSRNOG00000004300|general transcription factor 2A subunit 1 [Source:RGD Symbol%3BAcc:69246]
rn6_v1_chr6_-_145777767_145777767	0.0139007	Runx3	ENSRNOT00000046799|Rpl32|ENSRNOG00000032605|ribosomal protein L32 [Source:RGD Symbol%3BAcc:621203]
rn6_v1_chr10_-_85435016_85435016	0.0133278	Runx3	ENSRNOT00000079921|4933428G20Rik|ENSRNOG00000055533|RIKEN cDNA 4933428G20 gene [Source:MGI Symbol%3BAcc:MGI:1918475]
rn6_v1_chr2_-_198120041_198120120	0.0127778	Runx3	ENSRNOT00000079621|Plekho1|ENSRNOG00000021170|pleckstrin homology domain containing O1 [Source:RGD Symbol%3BAcc:1311487]	ENSRNOT00000028747|Plekho1|ENSRNOG00000021170|pleckstrin homology domain containing O1 [Source:RGD Symbol%3BAcc:1311487]
rn6_v1_chr5_-_136721379_136721379	0.0126844	Runx3	ENSRNOT00000026704|Atp6v0b|ENSRNOG00000019655|ATPase H+ transporting V0 subunit B [Source:RGD Symbol%3BAcc:1308303]
rn6_v1_chr20_+_4967194_4967194	0.01146	Runx3	ENSRNOT00000070846|Lsm2|ENSRNOG00000048725|LSM2 homolog%2C U6 small nuclear RNA and mRNA degradation associated [Source:RGD Symbol%3BAcc:1598536]
rn6_v1_chr1_+_69788609_69788609	0.0103141	Runx3	ENSRNOT00000075340|NEWGENE_1305281|ENSRNOG00000050407|hippocampus abundant transcript 1 [Source:RGD Symbol%3BAcc:9294064]
rn6_v1_chr17_-_23923792_23923792	0.00956262	Runx3	ENSRNOT00000018739|Gfod1|ENSRNOG00000014007|glucose-fructose oxidoreductase domain containing 1 [Source:RGD Symbol%3BAcc:1311507]
rn6_v1_chr20_-_38985036_38985036	0.00807165	Runx3	ENSRNOT00000001066|Serinc1|ENSRNOG00000029360|serine incorporator 1 [Source:RGD Symbol%3BAcc:727843]
rn6_v1_chr14_+_21041621_21041621	0.00595076	Runx3	ENSRNOT00000086571|Grsf1|ENSRNOG00000003392|G-rich RNA sequence binding factor 1 [Source:RGD Symbol%3BAcc:1310858]
rn6_v1_chr17_+_5342829_5342829	0.00360326	Runx3	ENSRNOT00000079938|Spata31d3|ENSRNOG00000056413|SPATA31 subfamily D%2C member 3 [Source:RGD Symbol%3BAcc:1311452]
rn6_v1_chr2_-_9023104_9023104	0.00310816	Runx3	ENSRNOT00000039652|Adgrv1|ENSRNOG00000016306|adhesion G protein-coupled receptor V1 [Source:RGD Symbol%3BAcc:1562101]
rn6_v1_chr19_+_14392423_14392423	0.00115993	Runx3	ENSRNOT00000018880|Tom1|ENSRNOG00000014093|target of myb1 membrane trafficking protein [Source:RGD Symbol%3BAcc:1308024]
rn6_v1_chr7_+_2504695_2504695	0.00113005	Runx3	ENSRNOT00000003965|Atp5b|ENSRNOG00000002840|ATP synthase%2C H+ transporting%2C mitochondrial F1 complex%2C beta polypeptide [Source:RGD Symbol%3BAcc:621368]
rn6_v1_chr11_-_34791993_34791993	0.000565478	Runx3	ENSRNOT00000002284|Dscr3|ENSRNOG00000001681|DSCR3 arrestin fold containing [Source:RGD Symbol%3BAcc:1306879]
