rn6_v1_chr10_-_88670430_88670430	1.24676	Smad4	ENSRNOT00000025547|Hcrt|ENSRNOG00000018892|hypocretin neuropeptide precursor [Source:RGD Symbol%3BAcc:2786]
rn6_v1_chr8_-_98738446_98738446	0.414519	Smad4	ENSRNOT00000019860|Zic1|ENSRNOG00000014644|Zic family member 1 [Source:RGD Symbol%3BAcc:620110]
rn6_v1_chr17_-_9695292_9695292	0.41188	Smad4	ENSRNOT00000036162|Prr7|ENSRNOG00000021447|proline rich 7 (synaptic) [Source:RGD Symbol%3BAcc:1561898]
rn6_v1_chr4_+_84194347_84194347	0.355287	Smad4	ENSRNOT00000084256|Chn2|ENSRNOG00000009411|chimerin 2 [Source:RGD Symbol%3BAcc:620140]
rn6_v1_chr12_-_41671437_41671437	0.342612	Smad4	ENSRNOT00000001883|Lhx5|ENSRNOG00000001392|LIM homeobox 5 [Source:RGD Symbol%3BAcc:71079]
rn6_v1_chr2_-_198360678_198360678	0.265538	Smad4	ENSRNOT00000051917|Hist2h2ac|ENSRNOG00000030736|histone cluster 2 H2A family member c [Source:RGD Symbol%3BAcc:1560965]
rn6_v1_chr5_-_152473868_152473868	0.252294	Smad4	ENSRNOT00000022130|Fam110d|ENSRNOG00000016491|family with sequence similarity 110%2C member D [Source:RGD Symbol%3BAcc:1564994]
rn6_v1_chr7_-_70842405_70842405	0.202506	Smad4	ENSRNOT00000047449|Nxph4|ENSRNOG00000025059|neurexophilin 4 [Source:RGD Symbol%3BAcc:628723]
rn6_v1_chr7_+_123168811_123168811	0.182602	Smad4	ENSRNOT00000007091|Csdc2|ENSRNOG00000005332|cold shock domain containing C2 [Source:RGD Symbol%3BAcc:628780]
rn6_v1_chr17_-_43821536_43821536	0.172025	Smad4	ENSRNOT00000072286|RGD1562378|ENSRNOG00000050933|histone H4 variant H4-v.1 [Source:RGD Symbol%3BAcc:1562378]
rn6_v1_chr1_-_101856881_101856881	0.165254	Smad4	ENSRNOT00000028615|Grin2d|ENSRNOG00000021063|glutamate ionotropic receptor NMDA type subunit 2D [Source:RGD Symbol%3BAcc:2740]
rn6_v1_chr10_-_45297385_45297385	0.162804	Smad4	ENSRNOT00000041187|Hist3h2bb|ENSRNOG00000031790|histone cluster 3 H2B family member b [Source:RGD Symbol%3BAcc:1583885]
rn6_v1_chr4_+_153774486_153774486	0.158986	Smad4	ENSRNOT00000074096|Tuba8|ENSRNOG00000048169|tubulin%2C alpha 8 [Source:RGD Symbol%3BAcc:1566041]
rn6_v1_chr5_-_152464850_152464850	0.145216	Smad4	ENSRNOT00000021937|Zfp593|ENSRNOG00000016392|zinc finger protein 593 [Source:RGD Symbol%3BAcc:1310179]
rn6_v1_chr17_-_44744902_44744902	0.141338	Smad4	ENSRNOT00000085381|RGD1562378|ENSRNOG00000058444|histone H4 variant H4-v.1 [Source:RGD Symbol%3BAcc:1562378]
rn6_v1_chr3_+_56862691_56862691	0.0991181	Smad4	ENSRNOT00000087712|Gad1|ENSRNOG00000000007|glutamate decarboxylase 1 [Source:RGD Symbol%3BAcc:2652]
rn6_v1_chr8_+_58347736_58347757	0.090306	Smad4	ENSRNOT00000080227|Slc35f2|ENSRNOG00000009014|solute carrier family 35%2C member F2 [Source:RGD Symbol%3BAcc:1311242]	ENSRNOT00000066222|Slc35f2|ENSRNOG00000009014|solute carrier family 35%2C member F2 [Source:RGD Symbol%3BAcc:1311242]
rn6_v1_chr14_-_35149608_35149610	0.0816175	Smad4	ENSRNOT00000003050|Kit|ENSRNOG00000002227|KIT proto-oncogene receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620568]	ENSRNOT00000090654|Kit|ENSRNOG00000002227|KIT proto-oncogene receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620568]
rn6_v1_chr13_-_91872954_91873096	0.0810033	Smad4	ENSRNOT00000004613|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]	ENSRNOT00000079263|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]
rn6_v1_chr17_+_78739389_78739389	0.0807873	Smad4	ENSRNOT00000020384|LOC102547897|ENSRNOG00000015196|uncharacterized LOC102547897 [Source:RGD Symbol%3BAcc:7640129]
rn6_v1_chr12_+_37668369_37668369	0.0787593	Smad4	ENSRNOT00000001419|Cdk2ap1|ENSRNOG00000001070|cyclin-dependent kinase 2 associated protein 1 [Source:RGD Symbol%3BAcc:1308664]
rn6_v1_chr14_-_34218961_34218961	0.07443	Smad4	ENSRNOT00000072588|LOC686911|ENSRNOG00000050100|similar to Exocyst complex component 1 (Exocyst complex component Sec3) [Source:RGD Symbol%3BAcc:1591303]
rn6_v1_chr4_-_170145262_170145262	0.0731684	Smad4	ENSRNOT00000074526|Hist1h4b|ENSRNOG00000045978|histone cluster 1%2C H4b [Source:RGD Symbol%3BAcc:620814]
rn6_v1_chr10_-_107539658_107539658	0.0723764	Smad4	ENSRNOT00000089346|Rbfox3|ENSRNOG00000003386|RNA binding protein%2C fox-1 homolog 3 [Source:RGD Symbol%3BAcc:1560070]
rn6_v1_chr1_+_72636959_72636959	0.0705767	Smad4	ENSRNOT00000023489|Il11|ENSRNOG00000017386|interleukin 11 [Source:RGD Symbol%3BAcc:621475]
rn6_v1_chr1_+_219345918_219345918	0.0705537	Smad4	ENSRNOT00000025018|Cdk2ap2|ENSRNOG00000018391|cyclin-dependent kinase 2 associated protein 2 [Source:RGD Symbol%3BAcc:1588883]
rn6_v1_chr13_+_106463368_106463368	0.0631584	Smad4	ENSRNOT00000003489|Esrrg|ENSRNOG00000002593|estrogen-related receptor gamma [Source:RGD Symbol%3BAcc:1303236]
rn6_v1_chr1_+_14224393_14224393	0.0602262	Smad4	ENSRNOT00000016037|Perp|ENSRNOG00000011994|PERP%2C TP53 apoptosis effector [Source:RGD Symbol%3BAcc:1310294]
rn6_v1_chr17_-_43689311_43689311	0.0593224	Smad4	ENSRNOT00000028779|Hist1h2bcl1|ENSRNOG00000021198|histone cluster 1%2C H2bc-like 1 [Source:RGD Symbol%3BAcc:1591796]
rn6_v1_chr4_+_51553454_51553454	0.0593219	Smad4	ENSRNOT00000073466|LOC100909784|ENSRNOG00000045831|leiomodin-2-like [Source:RGD Symbol%3BAcc:6501529]
rn6_v1_chr13_+_48287873_48287873	0.0557123	Smad4	ENSRNOT00000068223|Fam72a|ENSRNOG00000042747|family with sequence similarity 72%2C member A [Source:RGD Symbol%3BAcc:1598023]
rn6_v1_chr9_+_94562839_94562839	0.0521335	Smad4	ENSRNOT00000022308|RGD1311447|ENSRNOG00000016606|LOC363276 [Source:RGD Symbol%3BAcc:1311447]
rn6_v1_chr10_-_107539465_107539465	0.0514223	Smad4	ENSRNOT00000004524|Rbfox3|ENSRNOG00000003386|RNA binding protein%2C fox-1 homolog 3 [Source:RGD Symbol%3BAcc:1560070]
rn6_v1_chr1_-_101514547_101514547	0.0514159	Smad4	ENSRNOT00000079633|Ppp1r15a|ENSRNOG00000020938|protein phosphatase 1%2C regulatory subunit 15A [Source:RGD Symbol%3BAcc:621526]
rn6_v1_chr16_+_61758917_61758917	0.0505721	Smad4	ENSRNOT00000084858|Leprotl1|ENSRNOG00000012601|leptin receptor overlapping transcript-like 1 [Source:RGD Symbol%3BAcc:1307168]
rn6_v1_chr10_+_56453877_56453877	0.0492845	Smad4	ENSRNOT00000031640|Plscr3|ENSRNOG00000027914|phospholipid scramblase 3 [Source:RGD Symbol%3BAcc:1307016]
rn6_v1_chr17_-_44520240_44520240	0.0469235	Smad4	ENSRNOT00000086538|Hist1h2bh|ENSRNOG00000058187|histone cluster 1 H2B family member h [Source:RGD Symbol%3BAcc:2325039]
rn6_v1_chr15_+_48327461_48327461	0.0461651	Smad4	ENSRNOT00000018071|Ints9|ENSRNOG00000013459|integrator complex subunit 9 [Source:RGD Symbol%3BAcc:1311539]
rn6_v1_chr17_-_43770561_43770561	0.044216	Smad4	ENSRNOT00000088408|RGD1562378|ENSRNOG00000051891|histone H4 variant H4-v.1 [Source:RGD Symbol%3BAcc:1562378]
rn6_v1_chr12_+_21767606_21767606	0.0436028	Smad4	ENSRNOT00000059602|LOC103691013|ENSRNOG00000050511|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1-like [Source:RGD Symbol%3BAcc:9219688]
rn6_v1_chr3_+_148541909_148541909	0.037739	Smad4	ENSRNOT00000012187|Ccm2l|ENSRNOG00000009191|CCM2 like scaffolding protein [Source:RGD Symbol%3BAcc:1305202]
rn6_v1_chr9_-_16647458_16647458	0.036597	Smad4	ENSRNOT00000024380|Mrpl2|ENSRNOG00000018057|mitochondrial ribosomal protein L2 [Source:RGD Symbol%3BAcc:1307147]
rn6_v1_chrX_+_106823491_106823491	0.0363335	Smad4	ENSRNOT00000045997|Bex3|ENSRNOG00000028822|brain expressed X-linked 3 [Source:RGD Symbol%3BAcc:3148]
rn6_v1_chr7_-_14418950_14418950	0.0336209	Smad4	ENSRNOT00000066722|Rasal3|ENSRNOG00000006167|RAS protein activator like 3 [Source:RGD Symbol%3BAcc:1309019]
rn6_v1_chr7_+_119647375_119647375	0.0332269	Smad4	ENSRNOT00000046563|Kctd17|ENSRNOG00000000231|potassium channel tetramerization domain containing 17 [Source:RGD Symbol%3BAcc:1311154]
rn6_v1_chr8_+_117280705_117280705	0.029424	Smad4	ENSRNOT00000085038|Usp19|ENSRNOG00000049531|ubiquitin specific peptidase 19 [Source:RGD Symbol%3BAcc:1303276]
rn6_v1_chr10_-_90265017_90265017	0.029372	Smad4	ENSRNOT00000064283|Ubtf|ENSRNOG00000020937|upstream binding transcription factor%2C RNA polymerase I [Source:RGD Symbol%3BAcc:3927]	ENSRNOT00000048418|Ubtf|ENSRNOG00000020937|upstream binding transcription factor%2C RNA polymerase I [Source:RGD Symbol%3BAcc:3927]
rn6_v1_chr17_+_44520537_44520537	0.0290957	Smad4	ENSRNOT00000077985|hist1h2ail2|ENSRNOG00000056411|histone cluster 1%2C H2ai-like2 [Source:RGD Symbol%3BAcc:1562827]
rn6_v1_chr15_-_88622413_88622413	0.028103	Smad4	ENSRNOT00000092174|Pou4f1|ENSRNOG00000060662|POU class 4 homeobox 1 [Source:RGD Symbol%3BAcc:620074]
rn6_v1_chr9_+_66335492_66335492	0.0277238	Smad4	ENSRNOT00000037555|RGD1562029|ENSRNOG00000022723|similar to KIAA2012 protein [Source:RGD Symbol%3BAcc:1562029]
rn6_v1_chr17_+_23135985_23135985	0.0276556	Smad4	ENSRNOT00000090794|Nedd9|ENSRNOG00000014548|neural precursor cell expressed%2C developmentally down-regulated 9 [Source:RGD Symbol%3BAcc:1306276]
rn6_v1_chr14_+_91557601_91557601	0.0250944	Smad4	ENSRNOT00000038733|RGD1309870|ENSRNOG00000037621|hypothetical LOC289778 [Source:RGD Symbol%3BAcc:1309870]
rn6_v1_chr9_+_117583610_117583620	0.0250388	Smad4	ENSRNOT00000088647|Epb41l3|ENSRNOG00000016724|erythrocyte membrane protein band 4.1-like 3 [Source:RGD Symbol%3BAcc:71089]	ENSRNOT00000049426|Epb41l3|ENSRNOG00000016724|erythrocyte membrane protein band 4.1-like 3 [Source:RGD Symbol%3BAcc:71089]
rn6_v1_chr6_+_108745895_108745895	0.0224301	Smad4	ENSRNOT00000061786|LOC108348062|ENSRNOG00000040153|eukaryotic translation initiation factor 3 subunit H [Source:RGD Symbol%3BAcc:11498408]
rn6_v1_chr9_+_16647598_16647598	0.0212798	Smad4	ENSRNOT00000087413|Klc4|ENSRNOG00000018168|kinesin light chain 4 [Source:RGD Symbol%3BAcc:1306555]
rn6_v1_chr9_+_16647922_16647922	0.0208587	Smad4	ENSRNOT00000031625|Klc4|ENSRNOG00000018168|kinesin light chain 4 [Source:RGD Symbol%3BAcc:1306555]
rn6_v1_chr12_+_4546287_4546287	0.0190712	Smad4	ENSRNOT00000001416|Higd2al1|ENSRNOG00000001071|HIG1 hypoxia inducible domain family%2C member 2A-like 1 [Source:RGD Symbol%3BAcc:1586494]
rn6_v1_chr2_+_209839299_209839299	0.0182028	Smad4	ENSRNOT00000092450|Kcna2|ENSRNOG00000018285|potassium voltage-gated channel subfamily A member 2 [Source:RGD Symbol%3BAcc:2950]
rn6_v1_chr7_-_143217535_143217535	0.0155796	Smad4	ENSRNOT00000088316|Kb15|ENSRNOG00000009105|type II keratin Kb15 [Source:RGD Symbol%3BAcc:1565564]
rn6_v1_chr20_-_2211995_2211995	0.0123992	Smad4	ENSRNOT00000077201|Trim26|ENSRNOG00000032930|tripartite motif-containing 26 [Source:RGD Symbol%3BAcc:1359126]
rn6_v1_chr15_+_23792931_23792931	0.0117994	Smad4	ENSRNOT00000092091|Samd4a|ENSRNOG00000010489|sterile alpha motif domain containing 4A [Source:RGD Symbol%3BAcc:1310361]
rn6_v1_chr10_-_34333305_34333305	0.0110047	Smad4	ENSRNOT00000071365|Olr1384|ENSRNOG00000047001|olfactory receptor gene Olr1384 [Source:RGD Symbol%3BAcc:1586044]
rn6_v1_chrX_+_107370431_107370431	0.0105375	Smad4	ENSRNOT00000044372|Tceal1|ENSRNOG00000002387|transcription elongation factor A like 1 [Source:RGD Symbol%3BAcc:1549724]
rn6_v1_chrX_+_21696772_21696772	0.00704902	Smad4	ENSRNOT00000043559|Hsd17b10|ENSRNOG00000003049|hydroxysteroid (17-beta) dehydrogenase 10 [Source:RGD Symbol%3BAcc:69231]
rn6_v1_chr2_+_209838869_209838869	0.0067847	Smad4	ENSRNOT00000092365|Kcna2|ENSRNOG00000018285|potassium voltage-gated channel subfamily A member 2 [Source:RGD Symbol%3BAcc:2950]
rn6_v1_chr3_-_113342675_113342675	0.00622693	Smad4	ENSRNOT00000020130|Strc|ENSRNOG00000014845|stereocilin [Source:RGD Symbol%3BAcc:1593345]
rn6_v1_chr3_-_8979889_8979889	0.00358092	Smad4	ENSRNOT00000065128|Crat|ENSRNOG00000018145|carnitine O-acetyltransferase [Source:RGD Symbol%3BAcc:1303031]
rn6_v1_chr10_+_46940965_46940965	0.00222889	Smad4	ENSRNOT00000005366|Llgl1|ENSRNOG00000003948|LLGL1%2C scribble cell polarity complex component [Source:RGD Symbol%3BAcc:3012]
rn6_v1_chr7_-_120403523_120403523	0.00201043	Smad4	ENSRNOT00000015283|Sox10|ENSRNOG00000011305|SRY box 10 [Source:RGD Symbol%3BAcc:3735]
rn6_v1_chr7_+_144623555_144623555	0.0016596	Smad4	ENSRNOT00000022217|Hoxc6|ENSRNOG00000016442|homeo box C6 [Source:RGD Symbol%3BAcc:620626]
