rn6_v1_chr7_-_93826665_93826665	0.715764	Sox2	ENSRNOT00000011344|Tnfrsf11b|ENSRNOG00000008336|TNF receptor superfamily member 11B [Source:RGD Symbol%3BAcc:619802]
rn6_v1_chr3_+_155160481_155160481	0.709971	Sox2	ENSRNOT00000021133|Ppp1r16b|ENSRNOG00000015614|protein phosphatase 1%2C regulatory subunit 16B [Source:RGD Symbol%3BAcc:1589460]
rn6_v1_chr10_+_36715565_36715565	0.61048	Sox2	ENSRNOT00000005048|Clk4|ENSRNOG00000003714|CDC-like kinase 4 [Source:RGD Symbol%3BAcc:1310274]
rn6_v1_chr14_+_81819799_81819799	0.594177	Sox2	ENSRNOT00000076840|Mxd4|ENSRNOG00000015033|Max dimerization protein 4 [Source:RGD Symbol%3BAcc:1305093]
rn6_v1_chr10_-_47453442_47453442	0.584972	Sox2	ENSRNOT00000050061|Usp22|ENSRNOG00000032492|ubiquitin specific peptidase 22 [Source:RGD Symbol%3BAcc:1310354]
rn6_v1_chr5_+_172364421_172364421	0.57911	Sox2	ENSRNOT00000018769|Hes5|ENSRNOG00000013850|hes family bHLH transcription factor 5 [Source:RGD Symbol%3BAcc:621340]
rn6_v1_chr18_+_15467870_15467870	0.554072	Sox2	ENSRNOT00000091696|B4galt6|ENSRNOG00000015895|beta-1%2C4-galactosyltransferase 6 [Source:RGD Symbol%3BAcc:71046]
rn6_v1_chr5_-_86696388_86696388	0.534449	Sox2	ENSRNOT00000007812|Megf9|ENSRNOG00000005932|multiple EGF-like-domains 9 [Source:RGD Symbol%3BAcc:1308330]
rn6_v1_chr7_+_141702038_141702038	0.511244	Sox2	ENSRNOT00000086577|Dip2b|ENSRNOG00000056106|disco-interacting protein 2 homolog B [Source:RGD Symbol%3BAcc:1305671]
rn6_v1_chr2_-_183213228_183213228	0.50784	Sox2	ENSRNOT00000067618|Trim2|ENSRNOG00000010124|tripartite motif-containing 2 [Source:RGD Symbol%3BAcc:1310981]
rn6_v1_chr12_+_28381982_28381982	0.477655	Sox2	ENSRNOT00000076101|Wbscr17|ENSRNOG00000024435|Williams-Beuren syndrome chromosome region 17 [Source:RGD Symbol%3BAcc:1563452]
rn6_v1_chrX_+_80213332_80213332	0.469906	Sox2	ENSRNOT00000042827|Sh3bgrl|ENSRNOG00000002280|SH3 domain binding glutamate-rich protein like [Source:RGD Symbol%3BAcc:1560520]
rn6_v1_chr7_-_12275609_12275609	0.466493	Sox2	ENSRNOT00000086061|Apc2|ENSRNOG00000033791|APC2%2C WNT signaling pathway regulator [Source:RGD Symbol%3BAcc:1308256]
rn6_v1_chr12_-_25638797_25638797	0.452598	Sox2	ENSRNOT00000002033|Gatsl2|ENSRNOG00000001484|GATS protein-like 2 [Source:RGD Symbol%3BAcc:1304672]
rn6_v1_chr14_-_81399353_81399353	0.448563	Sox2	ENSRNOT00000018340|Add1|ENSRNOG00000013039|adducin 1 [Source:RGD Symbol%3BAcc:2041]
rn6_v1_chr10_+_62674561_62674561	0.406107	Sox2	ENSRNOT00000019946|Ankrd13b|ENSRNOG00000014742|ankyrin repeat domain 13B [Source:RGD Symbol%3BAcc:1564005]	ENSRNOT00000056110|Ankrd13b|ENSRNOG00000014742|ankyrin repeat domain 13B [Source:RGD Symbol%3BAcc:1564005]
rn6_v1_chr1_+_217345545_217345545	0.377823	Sox2	ENSRNOT00000071741|Shank2|ENSRNOG00000050206|SH3 and multiple ankyrin repeat domains 2 [Source:RGD Symbol%3BAcc:628772]
rn6_v1_chr7_-_70577147_70577147	0.376172	Sox2	ENSRNOT00000008854|Mbd6|ENSRNOG00000006209|methyl-CpG binding domain protein 6 [Source:RGD Symbol%3BAcc:1311050]
rn6_v1_chr1_-_82004538_82004538	0.373277	Sox2	ENSRNOT00000087572|Pou2f2|ENSRNOG00000055650|POU class 2 homeobox 2 [Source:RGD Symbol%3BAcc:621690]
rn6_v1_chr1_+_45923222_45923222	0.372388	Sox2	ENSRNOT00000092976|Arid1b|ENSRNOG00000017030|AT-rich interaction domain 1B [Source:RGD Symbol%3BAcc:708504]	ENSRNOT00000084454|Arid1b|ENSRNOG00000017030|AT-rich interaction domain 1B [Source:RGD Symbol%3BAcc:708504]	ENSRNOT00000022939|Arid1b|ENSRNOG00000017030|AT-rich interaction domain 1B [Source:RGD Symbol%3BAcc:708504]
rn6_v1_chr3_+_152571121_152571121	0.367234	Sox2	ENSRNOT00000087289|Epb41l1|ENSRNOG00000057817|erythrocyte membrane protein band 4.1-like 1 [Source:RGD Symbol%3BAcc:71087]	ENSRNOT00000080543|Epb41l1|ENSRNOG00000057817|erythrocyte membrane protein band 4.1-like 1 [Source:RGD Symbol%3BAcc:71087]	ENSRNOT00000083476|Epb41l1|ENSRNOG00000057817|erythrocyte membrane protein band 4.1-like 1 [Source:RGD Symbol%3BAcc:71087]
rn6_v1_chr13_+_90533365_90533365	0.367147	Sox2	ENSRNOT00000082469|Dcaf8|ENSRNOG00000006785|DDB1 and CUL4 associated factor 8 [Source:RGD Symbol%3BAcc:1308513]
rn6_v1_chrX_-_115175299_115175299	0.363664	Sox2	ENSRNOT00000074322|Dcx|ENSRNOG00000047712|doublecortin [Source:RGD Symbol%3BAcc:620670]
rn6_v1_chr15_+_41927241_41927241	0.357852	Sox2	ENSRNOT00000012035|Trim13|ENSRNOG00000009075|tripartite motif-containing 13 [Source:RGD Symbol%3BAcc:1307609]
rn6_v1_chr5_-_48165317_48165317	0.351683	Sox2	ENSRNOT00000088179|Ankrd6|ENSRNOG00000007110|ankyrin repeat domain 6 [Source:RGD Symbol%3BAcc:1583731]
rn6_v1_chr18_+_30562178_30562178	0.350403	Sox2	ENSRNOT00000040998|LOC108348771|ENSRNOG00000039471|protocadherin beta-16-like [Source:RGD Symbol%3BAcc:11492646]
rn6_v1_chr9_+_50925619_50925620	0.34569	Sox2	ENSRNOT00000076248|Ercc5|ENSRNOG00000022812|ERCC excision repair 5%2C endonuclease [Source:RGD Symbol%3BAcc:1586176]	ENSRNOT00000059349|Ercc5|ENSRNOG00000022812|ERCC excision repair 5%2C endonuclease [Source:RGD Symbol%3BAcc:1586176]
rn6_v1_chr2_-_142686577_142686577	0.343058	Sox2	ENSRNOT00000014562|Nhlrc3|ENSRNOG00000010843|NHL repeat containing 3 [Source:RGD Symbol%3BAcc:1565414]
rn6_v1_chr16_+_74237001_74237001	0.340177	Sox2	ENSRNOT00000026039|Polb|ENSRNOG00000019150|DNA polymerase beta [Source:RGD Symbol%3BAcc:3363]
rn6_v1_chr19_+_740028_740028	0.331375	Sox2	ENSRNOT00000076604|Dync1li2|ENSRNOG00000025791|dynein%2C cytoplasmic 1 light intermediate chain 2 [Source:RGD Symbol%3BAcc:621130]
rn6_v1_chr17_-_77687456_77687456	0.331195	Sox2	ENSRNOT00000045765|Frmd4a|ENSRNOG00000018500|FERM domain containing 4A [Source:RGD Symbol%3BAcc:1309050]	ENSRNOT00000081645|Frmd4a|ENSRNOG00000018500|FERM domain containing 4A [Source:RGD Symbol%3BAcc:1309050]
rn6_v1_chr1_+_266380973_266380973	0.33001	Sox2	ENSRNOT00000080509|Wbp1l|ENSRNOG00000020020|WW domain binding protein 1-like [Source:RGD Symbol%3BAcc:1305793]
rn6_v1_chr3_+_95715193_95715193	0.328887	Sox2	ENSRNOT00000089525|Pax6|ENSRNOG00000004410|paired box 6 [Source:RGD Symbol%3BAcc:3258]
rn6_v1_chr15_+_41448064_41448064	0.325782	Sox2	ENSRNOT00000019551|Sacs|ENSRNOG00000014509|sacsin molecular chaperone [Source:RGD Symbol%3BAcc:1307281]
rn6_v1_chr9_-_15274917_15274917	0.323486	Sox2	ENSRNOT00000019650|Pgc|ENSRNOG00000014492|progastricsin [Source:RGD Symbol%3BAcc:3943]
rn6_v1_chr7_-_98098268_98098268	0.319209	Sox2	ENSRNOT00000010361|Fbxo32|ENSRNOG00000006738|F-box protein 32 [Source:RGD Symbol%3BAcc:620373]
rn6_v1_chr5_-_79222687_79222687	0.314655	Sox2	ENSRNOT00000010516|Akna|ENSRNOG00000008005|AT-hook transcription factor [Source:RGD Symbol%3BAcc:1308202]
rn6_v1_chr18_+_30900291_30900291	0.309982	Sox2	ENSRNOT00000060461|Pcdhgb7|ENSRNOG00000039454|protocadherin gamma subfamily B%2C 7 [Source:RGD Symbol%3BAcc:1588516]
rn6_v1_chr8_-_6203515_6203579	0.309767	Sox2	ENSRNOT00000087278|Yap1|ENSRNOG00000005933|yes-associated protein 1 [Source:RGD Symbol%3BAcc:1306035]	ENSRNOT00000031189|Yap1|ENSRNOG00000005933|yes-associated protein 1 [Source:RGD Symbol%3BAcc:1306035]	ENSRNOT00000008074|Yap1|ENSRNOG00000005933|yes-associated protein 1 [Source:RGD Symbol%3BAcc:1306035]	ENSRNOT00000085285|Yap1|ENSRNOG00000005933|yes-associated protein 1 [Source:RGD Symbol%3BAcc:1306035]	ENSRNOT00000007866|Yap1|ENSRNOG00000005933|yes-associated protein 1 [Source:RGD Symbol%3BAcc:1306035]
rn6_v1_chr2_+_179952227_179952227	0.309092	Sox2	ENSRNOT00000015081|Pdgfc|ENSRNOG00000010695|platelet derived growth factor C [Source:RGD Symbol%3BAcc:68410]
rn6_v1_chr20_-_6257604_6257604	0.30878	Sox2	ENSRNOT00000092489|Stk38|ENSRNOG00000000519|serine/threonine kinase 38 [Source:RGD Symbol%3BAcc:1309455]
rn6_v1_chr15_+_40665041_40665041	0.305634	Sox2	ENSRNOT00000018300|Amer2|ENSRNOG00000013623|APC membrane recruitment protein 2 [Source:RGD Symbol%3BAcc:1559605]
rn6_v1_chr10_+_71536533_71536533	0.304532	Sox2	ENSRNOT00000088138|Acaca|ENSRNOG00000034013|acetyl-CoA carboxylase alpha [Source:RGD Symbol%3BAcc:621248]
rn6_v1_chr5_-_147412705_147412705	0.30099	Sox2	ENSRNOT00000010688|RGD1561149|ENSRNOG00000008113|similar to mKIAA1522 protein [Source:RGD Symbol%3BAcc:1561149]
rn6_v1_chr17_+_70684539_70684539	0.300884	Sox2	ENSRNOT00000025700|Pfkfb3|ENSRNOG00000018911|6-phosphofructo-2-kinase/fructose-2%2C6-biphosphatase 3 [Source:RGD Symbol%3BAcc:619776]
rn6_v1_chr13_+_52976507_52976522	0.29411	Sox2	ENSRNOT00000090599|Kif21b|ENSRNOG00000008471|kinesin family member 21B [Source:RGD Symbol%3BAcc:1306206]	ENSRNOT00000011324|Kif21b|ENSRNOG00000008471|kinesin family member 21B [Source:RGD Symbol%3BAcc:1306206]
rn6_v1_chr16_+_31734944_31734944	0.292318	Sox2	ENSRNOT00000059673|Palld|ENSRNOG00000010107|palladin%2C cytoskeletal associated protein [Source:RGD Symbol%3BAcc:2322545]
rn6_v1_chr1_+_140998240_140998260	0.289505	Sox2	ENSRNOT00000023506|Abhd2|ENSRNOG00000017120|abhydrolase domain containing 2 [Source:RGD Symbol%3BAcc:1311389]	ENSRNOT00000090897|Abhd2|ENSRNOG00000017120|abhydrolase domain containing 2 [Source:RGD Symbol%3BAcc:1311389]
rn6_v1_chr20_+_4993560_4993744	0.287993	Sox2	ENSRNOT00000081628|Vars|ENSRNOG00000000867|valyl-tRNA synthetase [Source:RGD Symbol%3BAcc:3950]	ENSRNOT00000087861|Vars|ENSRNOG00000000867|valyl-tRNA synthetase [Source:RGD Symbol%3BAcc:3950]	ENSRNOT00000001160|Vars|ENSRNOG00000000867|valyl-tRNA synthetase [Source:RGD Symbol%3BAcc:3950]
rn6_v1_chr3_+_131351587_131351587	0.286662	Sox2	ENSRNOT00000010835|Btbd3|ENSRNOG00000008088|BTB domain containing 3 [Source:RGD Symbol%3BAcc:1311623]
rn6_v1_chr10_+_14547172_14547172	0.284923	Sox2	ENSRNOT00000092043|Unkl|ENSRNOG00000054605|unkempt family like zinc finger [Source:RGD Symbol%3BAcc:1565247]
rn6_v1_chr17_-_89881919_89881919	0.280111	Sox2	ENSRNOT00000090982|LOC100910957|ENSRNOG00000046845|acyl-CoA-binding domain-containing protein 5-like [Source:RGD Symbol%3BAcc:6495507]
rn6_v1_chr6_+_106052212_106052212	0.279101	Sox2	ENSRNOT00000010626|Sipa1l1|ENSRNOG00000007646|signal-induced proliferation-associated 1 like 1 [Source:RGD Symbol%3BAcc:708497]
rn6_v1_chr10_-_83128297_83128297	0.278821	Sox2	ENSRNOT00000082160|Kat7|ENSRNOG00000022664|lysine acetyltransferase 7 [Source:RGD Symbol%3BAcc:727966]
rn6_v1_chr9_+_6966908_6966908	0.276845	Sox2	ENSRNOT00000072796|St6gal2|ENSRNOG00000046515|ST6 beta-galactoside alpha-2%2C6-sialyltransferase 2 [Source:RGD Symbol%3BAcc:1559663]
rn6_v1_chr13_+_41802697_41802697	0.273942	Sox2	ENSRNOT00000046719|LOC100362110|ENSRNOG00000030481|LRRGT00155-like [Source:RGD Symbol%3BAcc:2324561]
rn6_v1_chr9_+_14551758_14551758	0.273884	Sox2	ENSRNOT00000017157|Nfya|ENSRNOG00000012702|nuclear transcription factor Y subunit alpha [Source:RGD Symbol%3BAcc:70976]
rn6_v1_chr3_+_175426752_175426752	0.273477	Sox2	ENSRNOT00000085718|Ss18l1|ENSRNOG00000060010|SS18L1%2C nBAF chromatin remodeling complex subunit [Source:RGD Symbol%3BAcc:621847]
rn6_v1_chr14_+_2613406_2613406	0.271801	Sox2	ENSRNOT00000000083|Tmed5|ENSRNOG00000000073|transmembrane p24 trafficking protein 5 [Source:RGD Symbol%3BAcc:1359437]
rn6_v1_chr8_-_78655856_78655856	0.271774	Sox2	ENSRNOT00000081185|Tcf12|ENSRNOG00000057754|transcription factor 12 [Source:RGD Symbol%3BAcc:3829]
rn6_v1_chr7_-_118332577_118332577	0.267401	Sox2	ENSRNOT00000090370|Rbfox2|ENSRNOG00000004688|RNA binding protein%2C fox-1 homolog 2 [Source:RGD Symbol%3BAcc:1311838]
rn6_v1_chr5_-_147867583_147867583	0.266566	Sox2	ENSRNOT00000000139|Kpna6|ENSRNOG00000000127|karyopherin subunit alpha 6 [Source:RGD Symbol%3BAcc:1306570]
rn6_v1_chr18_+_30909490_30909490	0.266312	Sox2	ENSRNOT00000026967|Pcdhgb8|ENSRNOG00000027220|protocadherin gamma subfamily B%2C 8 [Source:RGD Symbol%3BAcc:1307432]
rn6_v1_chr8_+_114866768_114866768	0.26585	Sox2	ENSRNOT00000076731|Wdr82|ENSRNOG00000048441|WD repeat domain 82 [Source:RGD Symbol%3BAcc:1584269]
rn6_v1_chr6_-_65319527_65319527	0.265055	Sox2	ENSRNOT00000005618|Stxbp6|ENSRNOG00000004198|syntaxin binding protein 6 [Source:RGD Symbol%3BAcc:1306117]
rn6_v1_chr2_-_140618405_140618405	0.26481	Sox2	ENSRNOT00000017736|Setd7|ENSRNOG00000013045|SET domain containing (lysine methyltransferase) 7 [Source:RGD Symbol%3BAcc:1586346]
rn6_v1_chr10_-_17075139_17075139	0.26292	Sox2	ENSRNOT00000039398|Neurl1b|ENSRNOG00000027606|neuralized E3 ubiquitin protein ligase 1B [Source:RGD Symbol%3BAcc:1564984]
rn6_v1_chr6_-_28464118_28464118	0.262804	Sox2	ENSRNOT00000068214|Efr3b|ENSRNOG00000012950|EFR3 homolog B [Source:RGD Symbol%3BAcc:1310845]
rn6_v1_chr9_-_100253609_100253609	0.262519	Sox2	ENSRNOT00000036061|Kif1a|ENSRNOG00000023993|kinesin family member 1A [Source:RGD Symbol%3BAcc:1304996]
rn6_v1_chr10_+_6975244_6975244	0.261243	Sox2	ENSRNOT00000046232|Usp7|ENSRNOG00000025496|ubiquitin specific peptidase 7 [Source:RGD Symbol%3BAcc:1306915]
rn6_v1_chr10_-_35187416_35187416	0.260316	Sox2	ENSRNOT00000084509|Cnot6|ENSRNOG00000054891|CCR4-NOT transcription complex%2C subunit 6 [Source:RGD Symbol%3BAcc:1310783]
rn6_v1_chr10_-_109604899_109604899	0.260246	Sox2	ENSRNOT00000080188|Nploc4|ENSRNOG00000036698|NPL4 homolog%2C ubiquitin recognition factor [Source:RGD Symbol%3BAcc:620794]
rn6_v1_chr2_+_77868412_77868432	0.259812	Sox2	ENSRNOT00000065897|Myo10|ENSRNOG00000010161|myosin X [Source:RGD Symbol%3BAcc:1307193]	ENSRNOT00000014022|Myo10|ENSRNOG00000010161|myosin X [Source:RGD Symbol%3BAcc:1307193]
rn6_v1_chr1_-_18058055_18058055	0.258822	Sox2	ENSRNOT00000020988|Ptprk|ENSRNOG00000047605|protein tyrosine phosphatase%2C receptor type%2C K [Source:RGD Symbol%3BAcc:619706]
rn6_v1_chr12_-_22245100_22245100	0.257641	Sox2	ENSRNOT00000001912|Gigyf1|ENSRNOG00000001410|GRB10 interacting GYF protein 1 [Source:RGD Symbol%3BAcc:1309933]
rn6_v1_chr4_-_119131202_119131202	0.251964	Sox2	ENSRNOT00000011675|Antxr1|ENSRNOG00000008678|anthrax toxin receptor 1 [Source:RGD Symbol%3BAcc:1307144]
rn6_v1_chr1_-_88989552_88989552	0.251008	Sox2	ENSRNOT00000034001|Arhgap33|ENSRNOG00000024677|Rho GTPase activating protein 33 [Source:RGD Symbol%3BAcc:2318374]
rn6_v1_chr4_+_163358009_163358009	0.245094	Sox2	ENSRNOT00000082064|Klrd1|ENSRNOG00000060246|killer cell lectin like receptor D1 [Source:RGD Symbol%3BAcc:2978]
rn6_v1_chr5_-_153625869_153625869	0.245002	Sox2	ENSRNOT00000024464|Clic4|ENSRNOG00000018109|chloride intracellular channel 4 [Source:RGD Symbol%3BAcc:61857]
rn6_v1_chr4_+_95884743_95884743	0.244001	Sox2	ENSRNOT00000008585|Smarcad1|ENSRNOG00000006391|SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1` [Source:RGD Symbol%3BAcc:1309640]
rn6_v1_chr8_-_62987182_62987182	0.243496	Sox2	ENSRNOT00000070885|Islr2|ENSRNOG00000050714|immunoglobulin superfamily containing leucine-rich repeat 2 [Source:RGD Symbol%3BAcc:6497037]
rn6_v1_chrX_+_124393332_124393332	0.241418	Sox2	ENSRNOT00000049424|Zbtb33|ENSRNOG00000028899|zinc finger and BTB domain containing 33 [Source:RGD Symbol%3BAcc:1566309]
rn6_v1_chr4_-_155740193_155740193	0.239949	Sox2	ENSRNOT00000043229|LOC102550396|ENSRNOG00000030870|LRRGT00188 [Source:RGD Symbol%3BAcc:7546468]
rn6_v1_chr15_-_43542939_43542939	0.239838	Sox2	ENSRNOT00000012996|Dpysl2|ENSRNOG00000009625|dihydropyrimidinase-like 2 [Source:RGD Symbol%3BAcc:2517]
rn6_v1_chr8_-_116532169_116532169	0.238074	Sox2	ENSRNOT00000085364|Rbm5|ENSRNOG00000018153|RNA binding motif protein 5 [Source:RGD Symbol%3BAcc:1305059]
rn6_v1_chr1_-_73732118_73732118	0.238015	Sox2	ENSRNOT00000077964|Leng8|ENSRNOG00000018642|leukocyte receptor cluster member 8 [Source:RGD Symbol%3BAcc:1306180]
rn6_v1_chr9_+_53627208_53627208	0.237864	Sox2	ENSRNOT00000083487|Mfsd6|ENSRNOG00000012663|major facilitator superfamily domain containing 6 [Source:RGD Symbol%3BAcc:1562317]
rn6_v1_chr18_+_30435119_30435119	0.237522	Sox2	ENSRNOT00000027190|Pcdhb8|ENSRNOG00000020073|protocadherin beta 8 [Source:RGD Symbol%3BAcc:1309895]
rn6_v1_chr17_+_45199178_45199178	0.236845	Sox2	ENSRNOT00000080047|Zscan26|ENSRNOG00000053518|zinc finger and SCAN domain containing 26 [Source:RGD Symbol%3BAcc:727885]
rn6_v1_chr10_-_85435016_85435016	0.236792	Sox2	ENSRNOT00000079921|4933428G20Rik|ENSRNOG00000055533|RIKEN cDNA 4933428G20 gene [Source:MGI Symbol%3BAcc:MGI:1918475]
rn6_v1_chr14_+_63405408_63405408	0.236087	Sox2	ENSRNOT00000086658|AABR07015559.1|ENSRNOG00000055015|
rn6_v1_chr7_+_34952011_34952011	0.235628	Sox2	ENSRNOT00000077666|Fgd6|ENSRNOG00000054515|FYVE%2C RhoGEF and PH domain containing 6 [Source:RGD Symbol%3BAcc:1565609]
rn6_v1_chr9_+_2202511_2202511	0.234911	Sox2	ENSRNOT00000017556|Satb1|ENSRNOG00000012942|SATB homeobox 1 [Source:RGD Symbol%3BAcc:1305561]
rn6_v1_chr2_-_183031214_183031214	0.234529	Sox2	ENSRNOT00000013260|LOC679811|ENSRNOG00000009837|similar to RIKEN cDNA D930015E06 [Source:RGD Symbol%3BAcc:1583677]
rn6_v1_chr5_+_5616483_5616483	0.233092	Sox2	ENSRNOT00000011026|Ncoa2|ENSRNOG00000007975|nuclear receptor coactivator 2 [Source:RGD Symbol%3BAcc:620108]
rn6_v1_chrX_+_62754634_62754634	0.231006	Sox2	ENSRNOT00000016669|Pcyt1b|ENSRNOG00000012358|phosphate cytidylyltransferase 1%2C choline%2C beta [Source:RGD Symbol%3BAcc:708434]
rn6_v1_chr6_-_147172022_147172022	0.230718	Sox2	ENSRNOT00000080675|Itgb8|ENSRNOG00000006569|integrin subunit beta 8 [Source:RGD Symbol%3BAcc:1311374]
rn6_v1_chr15_-_52399074_52399074	0.230594	Sox2	ENSRNOT00000018440|Xpo7|ENSRNOG00000013288|exportin 7 [Source:RGD Symbol%3BAcc:1310928]
rn6_v1_chr4_+_88695590_88695590	0.230126	Sox2	ENSRNOT00000087835|Ppm1k|ENSRNOG00000006893|protein phosphatase%2C Mg2+/Mn2+ dependent%2C 1K [Source:RGD Symbol%3BAcc:1308501]
rn6_v1_chr11_-_65759581_65759581	0.22881	Sox2	ENSRNOT00000034334|Lrrc58|ENSRNOG00000027151|leucine rich repeat containing 58 [Source:RGD Symbol%3BAcc:1307440]
rn6_v1_chr10_-_15125408_15125408	0.22848	Sox2	ENSRNOT00000026395|Msln|ENSRNOG00000019445|mesothelin [Source:RGD Symbol%3BAcc:69333]
rn6_v1_chr15_+_105851542_105851542	0.22699	Sox2	ENSRNOT00000086959|Rap2a|ENSRNOG00000051564|RAS related protein 2a [Source:MGI Symbol%3BAcc:MGI:97855]
rn6_v1_chr3_+_148541909_148541909	0.226636	Sox2	ENSRNOT00000012187|Ccm2l|ENSRNOG00000009191|CCM2 like scaffolding protein [Source:RGD Symbol%3BAcc:1305202]
rn6_v1_chr5_+_59348639_59348640	0.225185	Sox2	ENSRNOT00000084031|Reck|ENSRNOG00000014863|reversion-inducing-cysteine-rich protein with kazal motifs [Source:RGD Symbol%3BAcc:1308845]	ENSRNOT00000060264|Reck|ENSRNOG00000014863|reversion-inducing-cysteine-rich protein with kazal motifs [Source:RGD Symbol%3BAcc:1308845]
rn6_v1_chr14_+_64686793_64686910	0.223373	Sox2	ENSRNOT00000005894|Adgra3|ENSRNOG00000004279|adhesion G protein-coupled receptor A3 [Source:RGD Symbol%3BAcc:1304914]	ENSRNOT00000036646|Adgra3|ENSRNOG00000004279|adhesion G protein-coupled receptor A3 [Source:RGD Symbol%3BAcc:1304914]
rn6_v1_chr18_+_27424328_27424328	0.223165	Sox2	ENSRNOT00000033784|Kif20a|ENSRNOG00000024428|kinesin family member 20A [Source:RGD Symbol%3BAcc:1307695]
rn6_v1_chr17_+_9596957_9596957	0.221692	Sox2	ENSRNOT00000017349|Fam193b|ENSRNOG00000039807|family with sequence similarity 193%2C member B [Source:RGD Symbol%3BAcc:1562335]
rn6_v1_chr3_+_151508361_151508361	0.221621	Sox2	ENSRNOT00000055251|Cep250|ENSRNOG00000019340|centrosomal protein 250 [Source:RGD Symbol%3BAcc:1562262]
rn6_v1_chr1_-_13915594_13915594	0.220537	Sox2	ENSRNOT00000015927|Arfgef3|ENSRNOG00000011460|ARFGEF family member 3 [Source:RGD Symbol%3BAcc:1309903]
rn6_v1_chr1_+_217345154_217345154	0.21994	Sox2	ENSRNOT00000092516|Shank2|ENSRNOG00000050206|SH3 and multiple ankyrin repeat domains 2 [Source:RGD Symbol%3BAcc:628772]
rn6_v1_chr4_-_176026133_176026163	0.219863	Sox2	ENSRNOT00000043374|Slco1a4|ENSRNOG00000047493|solute carrier organic anion transporter family%2C member 1a4 [Source:RGD Symbol%3BAcc:621389]	ENSRNOT00000046598|Slco1a4|ENSRNOG00000047493|solute carrier organic anion transporter family%2C member 1a4 [Source:RGD Symbol%3BAcc:621389]
rn6_v1_chr17_+_13670520_13670520	0.21978	Sox2	ENSRNOT00000019442|Shc3|ENSRNOG00000014366|SHC adaptor protein 3 [Source:RGD Symbol%3BAcc:69348]
rn6_v1_chr4_-_34194764_34194764	0.219279	Sox2	ENSRNOT00000045270|Col28a1|ENSRNOG00000033618|collagen type XXVIII alpha 1 chain [Source:RGD Symbol%3BAcc:1564680]
rn6_v1_chr10_+_67862054_67862054	0.218715	Sox2	ENSRNOT00000031746|Cdk5r1|ENSRNOG00000021685|cyclin-dependent kinase 5 regulatory subunit 1 [Source:RGD Symbol%3BAcc:629472]
rn6_v1_chr13_-_86451002_86451002	0.218569	Sox2	ENSRNOT00000043004|Pbx1|ENSRNOG00000004693|PBX homeobox 1 [Source:RGD Symbol%3BAcc:1308213]	ENSRNOT00000027996|Pbx1|ENSRNOG00000004693|PBX homeobox 1 [Source:RGD Symbol%3BAcc:1308213]
rn6_v1_chr2_+_142686724_142686724	0.216701	Sox2	ENSRNOT00000014614|Proser1|ENSRNOG00000010980|proline and serine rich 1 [Source:RGD Symbol%3BAcc:1309403]
rn6_v1_chr2_+_187512164_187512164	0.216503	Sox2	ENSRNOT00000051394|Mef2d|ENSRNOG00000031778|myocyte enhancer factor 2D [Source:RGD Symbol%3BAcc:621489]
rn6_v1_chr1_-_14412807_14412807	0.215975	Sox2	ENSRNOT00000074583|Tnfaip3|ENSRNOG00000049517|TNF alpha induced protein 3 [Source:RGD Symbol%3BAcc:1589275]
rn6_v1_chr2_+_151685251_151685251	0.214946	Sox2	ENSRNOT00000019340|Rap2b|ENSRNOG00000014420|RAP2B%2C member of RAS oncogene family [Source:RGD Symbol%3BAcc:620591]
rn6_v1_chr11_+_69484293_69484293	0.214607	Sox2	ENSRNOT00000049292|Kalrn|ENSRNOG00000001706|kalirin%2C RhoGEF kinase [Source:RGD Symbol%3BAcc:621865]
rn6_v1_chr14_+_71542057_71542208	0.214517	Sox2	ENSRNOT00000082592|Prom1|ENSRNOG00000003098|prominin 1 [Source:RGD Symbol%3BAcc:69367]	ENSRNOT00000083701|Prom1|ENSRNOG00000003098|prominin 1 [Source:RGD Symbol%3BAcc:69367]	ENSRNOT00000084322|Prom1|ENSRNOG00000003098|prominin 1 [Source:RGD Symbol%3BAcc:69367]
rn6_v1_chr1_-_222628596_222628645	0.214092	Sox2	ENSRNOT00000083157|RGD1308106|ENSRNOG00000025061|LOC361719 [Source:RGD Symbol%3BAcc:1308106]	ENSRNOT00000034477|RGD1308106|ENSRNOG00000025061|LOC361719 [Source:RGD Symbol%3BAcc:1308106]
rn6_v1_chr7_-_11223649_11223649	0.214083	Sox2	ENSRNOT00000061191|Mfsd12|ENSRNOG00000039858|major facilitator superfamily domain containing 12 [Source:RGD Symbol%3BAcc:1307722]
rn6_v1_chr11_+_16826399_16826399	0.213998	Sox2	ENSRNOT00000050701|Cxadr|ENSRNOG00000001557|coxsackie virus and adenovirus receptor [Source:RGD Symbol%3BAcc:619794]
rn6_v1_chr2_-_96668222_96668222	0.213373	Sox2	ENSRNOT00000016567|Pkia|ENSRNOG00000012095|cAMP-dependent protein kinase inhibitor alpha [Source:RGD Symbol%3BAcc:621021]
rn6_v1_chr3_+_41019898_41019898	0.213137	Sox2	ENSRNOT00000007335|Kcnj3|ENSRNOG00000005369|potassium voltage-gated channel subfamily J member 3 [Source:RGD Symbol%3BAcc:2958]
rn6_v1_chr20_-_26589209_26589209	0.211882	Sox2	ENSRNOT00000049437|Ctnna3|ENSRNOG00000000378|catenin alpha 3 [Source:RGD Symbol%3BAcc:1562230]
rn6_v1_chr15_+_83703791_83703791	0.211532	Sox2	ENSRNOT00000090637|Klf5|ENSRNOG00000008785|Kruppel-like factor 5 [Source:RGD Symbol%3BAcc:621446]
rn6_v1_chr4_+_6282278_6282278	0.211253	Sox2	ENSRNOT00000010349|Kmt2c|ENSRNOG00000061080|lysine methyltransferase 2C [Source:RGD Symbol%3BAcc:1587205]
rn6_v1_chr5_+_134679713_134679713	0.211238	Sox2	ENSRNOT00000067566|Mob3c|ENSRNOG00000037620|MOB kinase activator 3C [Source:RGD Symbol%3BAcc:1307821]
rn6_v1_chr1_+_142679345_142679345	0.210314	Sox2	ENSRNOT00000034267|Zscan2|ENSRNOG00000022164|zinc finger and SCAN domain containing 2 [Source:RGD Symbol%3BAcc:1584548]
rn6_v1_chr11_-_60882379_60882379	0.210286	Sox2	ENSRNOT00000002799|Cd200r1|ENSRNOG00000039048|CD200 receptor 1 [Source:RGD Symbol%3BAcc:61837]
rn6_v1_chr12_+_38303624_38303624	0.209298	Sox2	ENSRNOT00000001668|Zcchc8|ENSRNOG00000001243|zinc finger CCHC-type containing 8 [Source:RGD Symbol%3BAcc:1309774]
rn6_v1_chr2_-_117666683_117666683	0.208476	Sox2	ENSRNOT00000015479|AABR07009931.1|ENSRNOG00000011640|
rn6_v1_chr18_+_30904498_30904498	0.208029	Sox2	ENSRNOT00000026969|Pcdhga11|ENSRNOG00000027232|protocadherin gamma subfamily A%2C 11 [Source:RGD Symbol%3BAcc:621232]
rn6_v1_chr13_+_34400170_34400170	0.207186	Sox2	ENSRNOT00000061516|Clasp1|ENSRNOG00000002376|cytoplasmic linker associated protein 1 [Source:RGD Symbol%3BAcc:1310970]	ENSRNOT00000061515|Clasp1|ENSRNOG00000002376|cytoplasmic linker associated protein 1 [Source:RGD Symbol%3BAcc:1310970]	ENSRNOT00000061513|Clasp1|ENSRNOG00000002376|cytoplasmic linker associated protein 1 [Source:RGD Symbol%3BAcc:1310970]	ENSRNOT00000084506|Clasp1|ENSRNOG00000002376|cytoplasmic linker associated protein 1 [Source:RGD Symbol%3BAcc:1310970]	ENSRNOT00000086641|Clasp1|ENSRNOG00000002376|cytoplasmic linker associated protein 1 [Source:RGD Symbol%3BAcc:1310970]
rn6_v1_chr10_+_103934797_103934797	0.206643	Sox2	ENSRNOT00000035865|Cdr2l|ENSRNOG00000025815|cerebellar degeneration-related protein 2-like [Source:RGD Symbol%3BAcc:1306881]
rn6_v1_chr3_+_58965552_58965552	0.206363	Sox2	ENSRNOT00000002068|Map3k20|ENSRNOG00000001515|mitogen-activated protein kinase kinase kinase 20 [Source:RGD Symbol%3BAcc:1561394]
rn6_v1_chr13_-_70922245_70922245	0.205803	Sox2	ENSRNOT00000064860|Dhx9|ENSRNOG00000002735|DExH-box helicase 9 [Source:RGD Symbol%3BAcc:1308548]
rn6_v1_chr1_-_57815038_57815038	0.203323	Sox2	ENSRNOT00000075401|Rgmb|ENSRNOG00000048190|repulsive guidance molecule family member B [Source:RGD Symbol%3BAcc:1595392]
rn6_v1_chr4_+_170518673_170518673	0.203305	Sox2	ENSRNOT00000011803|Atf7ip|ENSRNOG00000008870|activating transcription factor 7 interacting protein [Source:RGD Symbol%3BAcc:1306030]
rn6_v1_chr20_+_6205903_6205990	0.203221	Sox2	ENSRNOT00000092333|Kctd20|ENSRNOG00000000517|potassium channel tetramerization domain containing 20 [Source:RGD Symbol%3BAcc:1309887]	ENSRNOT00000092655|Kctd20|ENSRNOG00000000517|potassium channel tetramerization domain containing 20 [Source:RGD Symbol%3BAcc:1309887]
rn6_v1_chr19_-_55490426_55490426	0.202005	Sox2	ENSRNOT00000081800|Cbfa2t3|ENSRNOG00000014723|CBFA2/RUNX1 translocation partner 3 [Source:RGD Symbol%3BAcc:1310547]
rn6_v1_chr16_-_19791832_19791832	0.201973	Sox2	ENSRNOT00000040393|Ushbp1|ENSRNOG00000023485|USH1 protein network component harmonin binding protein 1 [Source:RGD Symbol%3BAcc:1310859]
rn6_v1_chr12_+_27155587_27155587	0.201764	Sox2	ENSRNOT00000044800|AABR07035916.1|ENSRNOG00000034287|
rn6_v1_chr20_+_3558827_3558827	0.200344	Sox2	ENSRNOT00000088130|Ddr1|ENSRNOG00000057125|discoidin domain receptor tyrosine kinase 1 [Source:RGD Symbol%3BAcc:2252]
rn6_v1_chr5_+_116421894_116421900	0.19857	Sox2	ENSRNOT00000080577|Nfia|ENSRNOG00000006966|nuclear factor I/A [Source:RGD Symbol%3BAcc:3170]	ENSRNOT00000086628|Nfia|ENSRNOG00000006966|nuclear factor I/A [Source:RGD Symbol%3BAcc:3170]	ENSRNOT00000004017|Nfia|ENSRNOG00000006966|nuclear factor I/A [Source:RGD Symbol%3BAcc:3170]
rn6_v1_chr1_+_277459200_277459200	0.198258	Sox2	ENSRNOT00000086008|AABR07007023.1|ENSRNOG00000056577|
rn6_v1_chr6_-_21112734_21112734	0.1979	Sox2	ENSRNOT00000079819|Rasgrp3|ENSRNOG00000032703|RAS guanyl releasing protein 3 [Source:RGD Symbol%3BAcc:1304612]
rn6_v1_chr3_-_80601410_80601410	0.197798	Sox2	ENSRNOT00000022841|Atg13|ENSRNOG00000016984|autophagy related 13 [Source:RGD Symbol%3BAcc:1310685]
rn6_v1_chr5_-_166133491_166133491	0.19759	Sox2	ENSRNOT00000087739|Kif1b|ENSRNOG00000057626|kinesin family member 1B [Source:RGD Symbol%3BAcc:621520]	ENSRNOT00000089099|Kif1b|ENSRNOG00000057626|kinesin family member 1B [Source:RGD Symbol%3BAcc:621520]
rn6_v1_chr8_-_39460844_39460844	0.197442	Sox2	ENSRNOT00000048875|Pknox2|ENSRNOG00000028856|PBX/knotted 1 homeobox 2 [Source:RGD Symbol%3BAcc:1590611]
rn6_v1_chr2_-_34452895_34452895	0.197406	Sox2	ENSRNOT00000079385|AABR07007905.2|ENSRNOG00000053229|
rn6_v1_chrX_-_26376467_26376467	0.197397	Sox2	ENSRNOT00000051655|Arhgap6|ENSRNOG00000003956|Rho GTPase activating protein 6 [Source:RGD Symbol%3BAcc:2323364]	ENSRNOT00000036502|Arhgap6|ENSRNOG00000003956|Rho GTPase activating protein 6 [Source:RGD Symbol%3BAcc:2323364]
rn6_v1_chr13_-_73055631_73055631	0.195978	Sox2	ENSRNOT00000081892|Xpr1|ENSRNOG00000000042|xenotropic and polytropic retrovirus receptor 1 [Source:RGD Symbol%3BAcc:1306554]
rn6_v1_chr4_-_11497531_11497531	0.195772	Sox2	ENSRNOT00000078799|Magi2|ENSRNOG00000013962|membrane associated guanylate kinase%2C WW and PDZ domain containing 2 [Source:RGD Symbol%3BAcc:621855]
rn6_v1_chr18_+_15856801_15856801	0.195448	Sox2	ENSRNOT00000071548|Zfp397|ENSRNOG00000048101|zinc finger protein 397 [Source:RGD Symbol%3BAcc:6504280]
rn6_v1_chr2_+_22909569_22909569	0.194945	Sox2	ENSRNOT00000073871|Homer1|ENSRNOG00000047014|homer scaffolding protein 1 [Source:RGD Symbol%3BAcc:628725]
rn6_v1_chr2_+_205553163_205553163	0.193539	Sox2	ENSRNOT00000039572|Nras|ENSRNOG00000023079|neuroblastoma RAS viral oncogene homolog [Source:RGD Symbol%3BAcc:3205]
rn6_v1_chr7_+_2795901_2795901	0.192705	Sox2	ENSRNOT00000047462|Ankrd52|ENSRNOG00000030597|ankyrin repeat domain 52 [Source:RGD Symbol%3BAcc:1307124]
rn6_v1_chr8_+_117620317_117620317	0.191926	Sox2	ENSRNOT00000084220|Celsr3|ENSRNOG00000053889|cadherin%2C EGF LAG seven-pass G-type receptor 3 [Source:RGD Symbol%3BAcc:621787]
rn6_v1_chr11_+_83868655_83868655	0.191678	Sox2	ENSRNOT00000072402|NEWGENE_621438|ENSRNOG00000046850|thrombopoietin [Source:RGD Symbol%3BAcc:11455920]
rn6_v1_chr12_-_13668515_13668515	0.191502	Sox2	ENSRNOT00000086847|Fscn1|ENSRNOG00000056585|fascin actin-bundling protein 1 [Source:MGI Symbol%3BAcc:MGI:1352745]
rn6_v1_chr7_-_34951644_34951644	0.191127	Sox2	ENSRNOT00000030015|Vezt|ENSRNOG00000006514|vezatin%2C adherens junctions transmembrane protein [Source:RGD Symbol%3BAcc:1359117]
rn6_v1_chr9_-_50884596_50884596	0.190705	Sox2	ENSRNOT00000016285|Kdelc1|ENSRNOG00000011740|KDEL motif containing 1 [Source:RGD Symbol%3BAcc:1304684]
rn6_v1_chr3_-_48372583_48372672	0.189929	Sox2	ENSRNOT00000040482|Dpp4|ENSRNOG00000030763|dipeptidylpeptidase 4 [Source:RGD Symbol%3BAcc:2515]	ENSRNOT00000077788|Dpp4|ENSRNOG00000030763|dipeptidylpeptidase 4 [Source:RGD Symbol%3BAcc:2515]	ENSRNOT00000085426|Dpp4|ENSRNOG00000030763|dipeptidylpeptidase 4 [Source:RGD Symbol%3BAcc:2515]
rn6_v1_chr13_-_79744939_79744939	0.189925	Sox2	ENSRNOT00000076706|Suco|ENSRNOG00000026542|SUN domain containing ossification factor [Source:RGD Symbol%3BAcc:735185]
rn6_v1_chr9_-_110225486_110225486	0.188565	Sox2	ENSRNOT00000045096|Efna5|ENSRNOG00000034177|ephrin A5 [Source:RGD Symbol%3BAcc:620391]
rn6_v1_chr9_-_43454078_43454078	0.188318	Sox2	ENSRNOT00000023550|Tmem131|ENSRNOG00000017265|transmembrane protein 131 [Source:RGD Symbol%3BAcc:1309266]
rn6_v1_chr16_+_35573058_35573058	0.188204	Sox2	ENSRNOT00000059580|Galntl6|ENSRNOG00000038976|polypeptide N-acetylgalactosaminyltransferase-like 6 [Source:RGD Symbol%3BAcc:1564773]
rn6_v1_chr6_+_110624856_110624856	0.187848	Sox2	ENSRNOT00000014017|Vash1|ENSRNOG00000010457|vasohibin 1 [Source:RGD Symbol%3BAcc:1564082]
rn6_v1_chr18_-_40134504_40134504	0.187748	Sox2	ENSRNOT00000022294|Trim36|ENSRNOG00000016612|tripartite motif-containing 36 [Source:RGD Symbol%3BAcc:1308714]
rn6_v1_chr11_+_84396033_84396033	0.187722	Sox2	ENSRNOT00000002316|Abcc5|ENSRNOG00000029178|ATP binding cassette subfamily C member 5 [Source:RGD Symbol%3BAcc:70913]
rn6_v1_chr5_+_25168295_25168295	0.187076	Sox2	ENSRNOT00000020245|Fsbp|ENSRNOG00000015004|fibrinogen silencer binding protein [Source:RGD Symbol%3BAcc:7611658]
rn6_v1_chr5_+_135074297_135074297	0.187073	Sox2	ENSRNOT00000000157|Pik3r3|ENSRNOG00000000145|phosphoinositide-3-kinase regulatory subunit 3 [Source:RGD Symbol%3BAcc:621042]
rn6_v1_chr6_+_73553210_73553210	0.186056	Sox2	ENSRNOT00000006562|Akap6|ENSRNOG00000004841|A-kinase anchoring protein 6 [Source:RGD Symbol%3BAcc:69412]
rn6_v1_chr13_+_95589668_95589668	0.185434	Sox2	ENSRNOT00000005849|Zfp238|ENSRNOG00000004423|zinc finger protein 238 [Source:RGD Symbol%3BAcc:621548]
rn6_v1_chr4_-_115157263_115157263	0.183268	Sox2	ENSRNOT00000015296|Tet3|ENSRNOG00000011387|tet methylcytosine dioxygenase 3 [Source:RGD Symbol%3BAcc:1590584]
rn6_v1_chr1_+_248228496_248228496	0.182829	Sox2	ENSRNOT00000015406|Uhrf2|ENSRNOG00000011308|ubiquitin like with PHD and ring finger domains 2 [Source:RGD Symbol%3BAcc:1309990]
rn6_v1_chr4_-_43096399_43096399	0.182826	Sox2	ENSRNOT00000087167|Cttnbp2|ENSRNOG00000061845|cortactin binding protein 2 [Source:RGD Symbol%3BAcc:628691]
rn6_v1_chr11_-_84633504_84633504	0.181761	Sox2	ENSRNOT00000052120|Klhl24|ENSRNOG00000033372|kelch-like family member 24 [Source:RGD Symbol%3BAcc:727971]
rn6_v1_chr6_+_99625306_99625306	0.181392	Sox2	ENSRNOT00000008573|Plekhg3|ENSRNOG00000006570|pleckstrin homology and RhoGEF domain containing G3 [Source:RGD Symbol%3BAcc:1308089]
rn6_v1_chr8_-_48634797_48634797	0.180996	Sox2	ENSRNOT00000012868|Hinfp|ENSRNOG00000009499|histone H4 transcription factor [Source:RGD Symbol%3BAcc:1311492]
rn6_v1_chrX_+_68771100_68771100	0.180673	Sox2	ENSRNOT00000043872|Stard8|ENSRNOG00000033883|StAR-related lipid transfer domain containing 8 [Source:RGD Symbol%3BAcc:1560770]
rn6_v1_chr16_+_59564419_59564419	0.180456	Sox2	ENSRNOT00000083434|Lonrf1|ENSRNOG00000053706|LON peptidase N-terminal domain and ring finger 1 [Source:RGD Symbol%3BAcc:1562583]
rn6_v1_chr13_+_49870976_49870976	0.179507	Sox2	ENSRNOT00000090170|Pik3c2b|ENSRNOG00000029938|phosphatidylinositol-4-phosphate 3-kinase%2C catalytic subunit type 2 beta [Source:RGD Symbol%3BAcc:1306541]
rn6_v1_chr2_-_165739874_165739874	0.178081	Sox2	ENSRNOT00000014384|Kpna4|ENSRNOG00000010768|karyopherin subunit alpha 4 [Source:RGD Symbol%3BAcc:1311483]
rn6_v1_chr4_-_183544850_183544850	0.177024	Sox2	ENSRNOT00000071407|Dennd5b|ENSRNOG00000049378|DENN/MADD domain containing 5B [Source:MGI Symbol%3BAcc:MGI:2444273]
rn6_v1_chr7_+_58419197_58419197	0.175665	Sox2	ENSRNOT00000085829|Zfc3h1|ENSRNOG00000053060|zinc finger%2C C3H1-type containing [Source:RGD Symbol%3BAcc:1306287]
rn6_v1_chr20_-_13571364_13571364	0.17437	Sox2	ENSRNOT00000081733|Zfp280b|ENSRNOG00000028441|zinc finger protein 280B [Source:RGD Symbol%3BAcc:1565460]
rn6_v1_chr3_-_43119159_43119159	0.174211	Sox2	ENSRNOT00000041394|Nr4a2|ENSRNOG00000005600|nuclear receptor subfamily 4%2C group A%2C member 2 [Source:RGD Symbol%3BAcc:3202]
rn6_v1_chr3_+_175408629_175408629	0.174044	Sox2	ENSRNOT00000081344|Lsm14b|ENSRNOG00000054557|LSM family member 14B [Source:RGD Symbol%3BAcc:1563798]
rn6_v1_chr1_+_1545134_1545134	0.173081	Sox2	ENSRNOT00000044523|AABR07000156.1|ENSRNOG00000029897|
rn6_v1_chr14_+_84150908_84150908	0.173007	Sox2	ENSRNOT00000005516|Dusp18|ENSRNOG00000024945|dual specificity phosphatase 18 [Source:RGD Symbol%3BAcc:1306929]
rn6_v1_chr7_-_116201756_116201756	0.172716	Sox2	ENSRNOT00000091401|Cyp11b2|ENSRNOG00000030111|cytochrome P450%2C family 11%2C subfamily b%2C polypeptide 2 [Source:RGD Symbol%3BAcc:2454]
rn6_v1_chr11_+_86512797_86512797	0.17189	Sox2	ENSRNOT00000051680|Gp1bb|ENSRNOG00000029912|glycoprotein Ib platelet beta subunit [Source:RGD Symbol%3BAcc:621050]
rn6_v1_chr3_+_164665532_164665532	0.171288	Sox2	ENSRNOT00000014309|Ptpn1|ENSRNOG00000010574|protein tyrosine phosphatase%2C non-receptor type 1 [Source:RGD Symbol%3BAcc:61965]
rn6_v1_chr4_-_125929002_125929002	0.170867	Sox2	ENSRNOT00000083271|Magi1|ENSRNOG00000022060|membrane associated guanylate kinase%2C WW and PDZ domain containing 1 [Source:RGD Symbol%3BAcc:1586025]
rn6_v1_chr8_+_5967463_5967463	0.170842	Sox2	ENSRNOT00000086251|Tmem123|ENSRNOG00000010584|transmembrane protein 123 [Source:RGD Symbol%3BAcc:1305625]
rn6_v1_chr8_-_49158971_49158971	0.170663	Sox2	ENSRNOT00000020573|Kmt2a|ENSRNOG00000015133|lysine methyltransferase 2A [Source:RGD Symbol%3BAcc:1586165]
rn6_v1_chrX_-_158288109_158288109	0.170277	Sox2	ENSRNOT00000072527|LOC103690175|ENSRNOG00000048650|PHD finger protein 6 [Source:RGD Symbol%3BAcc:9471618]
rn6_v1_chr3_-_9448167_9448167	0.168378	Sox2	ENSRNOT00000012617|Abl1|ENSRNOG00000009371|ABL proto-oncogene 1%2C non-receptor tyrosine kinase [Source:RGD Symbol%3BAcc:1584969]
rn6_v1_chr6_+_147876237_147876237	0.1681	Sox2	ENSRNOT00000056649|Tmem196|ENSRNOG00000037435|transmembrane protein 196 [Source:RGD Symbol%3BAcc:1562527]
rn6_v1_chr10_-_104482838_104482838	0.167947	Sox2	ENSRNOT00000007246|Recql5|ENSRNOG00000005107|RecQ like helicase 5 [Source:RGD Symbol%3BAcc:1310823]
rn6_v1_chr11_-_66819079_66819079	0.167475	Sox2	ENSRNOT00000003255|Golgb1|ENSRNOG00000030314|golgin B1 [Source:RGD Symbol%3BAcc:708429]
rn6_v1_chr3_-_60765645_60765645	0.166961	Sox2	ENSRNOT00000050513|Atf2|ENSRNOG00000001597|activating transcription factor 2 [Source:RGD Symbol%3BAcc:621862]
rn6_v1_chr10_+_108132105_108132105	0.166063	Sox2	ENSRNOT00000072534|Cbx2|ENSRNOG00000049215|chromobox 2 [Source:RGD Symbol%3BAcc:1588561]
rn6_v1_chr11_-_30428073_30428073	0.166003	Sox2	ENSRNOT00000047741|Scaf4|ENSRNOG00000002104|SR-related CTD-associated factor 4 [Source:RGD Symbol%3BAcc:727896]
rn6_v1_chr2_-_223322585_223322585	0.164834	Sox2	ENSRNOT00000015036|Ptbp2|ENSRNOG00000010827|polypyrimidine tract binding protein 2 [Source:RGD Symbol%3BAcc:1359267]
rn6_v1_chr7_-_12393266_12393266	0.164737	Sox2	ENSRNOT00000021709|Efna2|ENSRNOG00000016203|ephrin A2 [Source:RGD Symbol%3BAcc:620389]
rn6_v1_chr7_-_12424367_12424367	0.164589	Sox2	ENSRNOT00000060698|Midn|ENSRNOG00000015434|midnolin [Source:RGD Symbol%3BAcc:1309629]
rn6_v1_chr12_-_29743705_29743705	0.163977	Sox2	ENSRNOT00000001185|Caln1|ENSRNOG00000000886|calneuron 1 [Source:RGD Symbol%3BAcc:1305843]
rn6_v1_chr4_-_118534266_118534280	0.163657	Sox2	ENSRNOT00000081201|Gmcl1|ENSRNOG00000017838|germ cell-less%2C spermatogenesis associated 1 [Source:RGD Symbol%3BAcc:1359265]	ENSRNOT00000024414|Gmcl1|ENSRNOG00000017838|germ cell-less%2C spermatogenesis associated 1 [Source:RGD Symbol%3BAcc:1359265]
rn6_v1_chr17_-_57394985_57394985	0.163411	Sox2	ENSRNOT00000019968|Epc1|ENSRNOG00000014834|enhancer of polycomb homolog 1 [Source:RGD Symbol%3BAcc:2324280]
rn6_v1_chr20_-_31597830_31597830	0.163255	Sox2	ENSRNOT00000085877|Col13a1|ENSRNOG00000000552|collagen type XIII alpha 1 chain [Source:RGD Symbol%3BAcc:1595704]
rn6_v1_chr1_+_167169442_167169442	0.163196	Sox2	ENSRNOT00000048172|LOC102549471|ENSRNOG00000020188|short transient receptor potential channel 2-like [Source:RGD Symbol%3BAcc:7692537]
rn6_v1_chr4_+_77623538_77623538	0.160695	Sox2	ENSRNOT00000059263|Zfp956|ENSRNOG00000026874|zinc finger protein 956 [Source:RGD Symbol%3BAcc:1304879]
rn6_v1_chr10_+_1214731_1214731	0.160612	Sox2	ENSRNOT00000080445|AABR07028970.2|ENSRNOG00000056130|
rn6_v1_chr3_+_139695028_139695028	0.159926	Sox2	ENSRNOT00000089098|Slc24a3|ENSRNOG00000060687|solute carrier family 24 member 3 [Source:RGD Symbol%3BAcc:69256]
rn6_v1_chr1_-_167911961_167911961	0.159909	Sox2	ENSRNOT00000025097|Olr59|ENSRNOG00000018606|olfactory receptor 59 [Source:RGD Symbol%3BAcc:628858]
rn6_v1_chr8_-_116531784_116531784	0.159395	Sox2	ENSRNOT00000024529|Rbm5|ENSRNOG00000018153|RNA binding motif protein 5 [Source:RGD Symbol%3BAcc:1305059]
rn6_v1_chr3_+_116899878_116899906	0.1584	Sox2	ENSRNOT00000090802|Sema6d|ENSRNOG00000004812|semaphorin 6D [Source:RGD Symbol%3BAcc:1310910]	ENSRNOT00000066101|Sema6d|ENSRNOG00000004812|semaphorin 6D [Source:RGD Symbol%3BAcc:1310910]
rn6_v1_chr4_+_87026530_87026530	0.158339	Sox2	ENSRNOT00000018425|Avl9|ENSRNOG00000013314|AVL9 cell migration associated [Source:RGD Symbol%3BAcc:1564615]
rn6_v1_chr12_-_9988618_9988618	0.157992	Sox2	ENSRNOT00000087449|Rasl11a|ENSRNOG00000000956|RAS-like family 11 member A [Source:RGD Symbol%3BAcc:1303231]
rn6_v1_chr1_+_144831523_144831523	0.157966	Sox2	ENSRNOT00000039748|Mex3b|ENSRNOG00000025142|mex-3 RNA binding family member B [Source:RGD Symbol%3BAcc:1306790]
rn6_v1_chr17_+_70684134_70684134	0.157711	Sox2	ENSRNOT00000025731|Pfkfb3|ENSRNOG00000018911|6-phosphofructo-2-kinase/fructose-2%2C6-biphosphatase 3 [Source:RGD Symbol%3BAcc:619776]	ENSRNOT00000068354|Pfkfb3|ENSRNOG00000018911|6-phosphofructo-2-kinase/fructose-2%2C6-biphosphatase 3 [Source:RGD Symbol%3BAcc:619776]
rn6_v1_chr14_-_21127868_21127875	0.157569	Sox2	ENSRNOT00000020608|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]	ENSRNOT00000092172|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]
rn6_v1_chr12_-_44279002_44279002	0.156675	Sox2	ENSRNOT00000064900|Fbxo21|ENSRNOG00000001129|F-box protein 21 [Source:RGD Symbol%3BAcc:1307346]
rn6_v1_chr10_+_85130141_85130141	0.156231	Sox2	ENSRNOT00000088101|AABR07030425.1|ENSRNOG00000056057|
rn6_v1_chr3_-_21697945_21697945	0.155554	Sox2	ENSRNOT00000012433|Zbtb26|ENSRNOG00000009346|zinc finger and BTB domain containing 26 [Source:RGD Symbol%3BAcc:1308561]
rn6_v1_chr16_+_22361998_22361998	0.155058	Sox2	ENSRNOT00000016193|Slc18a1|ENSRNOG00000011992|solute carrier family 18 member A1 [Source:RGD Symbol%3BAcc:3693]
rn6_v1_chr8_-_47339343_47339343	0.154763	Sox2	ENSRNOT00000081007|Arhgef12|ENSRNOG00000008924|Rho guanine nucleotide exchange factor 12 [Source:RGD Symbol%3BAcc:1305111]
rn6_v1_chr9_+_49479023_49479137	0.154504	Sox2	ENSRNOT00000050922|Pou3f3|ENSRNOG00000038909|POU class 3 homeobox 3 [Source:RGD Symbol%3BAcc:619768]	ENSRNOT00000077111|Pou3f3|ENSRNOG00000038909|POU class 3 homeobox 3 [Source:RGD Symbol%3BAcc:619768]
rn6_v1_chr5_-_117780777_117780777	0.154503	Sox2	ENSRNOT00000081971|Dock7|ENSRNOG00000008298|dedicator of cytokinesis 7 [Source:RGD Symbol%3BAcc:1309790]
rn6_v1_chr13_+_103396314_103396314	0.154254	Sox2	ENSRNOT00000049499|Slc30a10|ENSRNOG00000002397|solute carrier family 30%2C member 10 [Source:RGD Symbol%3BAcc:1305098]
rn6_v1_chr18_-_57201740_57201740	0.153959	Sox2	ENSRNOT00000026227|Ablim3|ENSRNOG00000019365|actin binding LIM protein family%2C member 3 [Source:RGD Symbol%3BAcc:1565118]
rn6_v1_chr7_+_80750725_80750725	0.152929	Sox2	ENSRNOT00000079962|Oxr1|ENSRNOG00000056487|oxidation resistance 1 [Source:RGD Symbol%3BAcc:621857]
rn6_v1_chr1_+_198911911_198911911	0.152842	Sox2	ENSRNOT00000055002|Prr14|ENSRNOG00000018518|proline rich 14 [Source:RGD Symbol%3BAcc:1594592]
rn6_v1_chr9_-_19880346_19880346	0.151342	Sox2	ENSRNOT00000014051|Cyp39a1|ENSRNOG00000010519|cytochrome P450%2C family 39%2C subfamily a%2C polypeptide 1 [Source:RGD Symbol%3BAcc:1307471]
rn6_v1_chr3_+_156662114_156662120	0.151332	Sox2	ENSRNOT00000041390|Top1|ENSRNOG00000047611|topoisomerase (DNA) I [Source:RGD Symbol%3BAcc:621246]	ENSRNOT00000086260|Top1|ENSRNOG00000047611|topoisomerase (DNA) I [Source:RGD Symbol%3BAcc:621246]
rn6_v1_chr15_-_2966576_2966576	0.150789	Sox2	ENSRNOT00000070893|Kat6b|ENSRNOG00000012850|lysine acetyltransferase 6B [Source:RGD Symbol%3BAcc:1566399]	ENSRNOT00000017383|Kat6b|ENSRNOG00000012850|lysine acetyltransferase 6B [Source:RGD Symbol%3BAcc:1566399]
rn6_v1_chr1_-_101323960_101323960	0.150521	Sox2	ENSRNOT00000041513|Trpm4|ENSRNOG00000020714|transient receptor potential cation channel%2C subfamily M%2C member 4 [Source:RGD Symbol%3BAcc:620244]
rn6_v1_chr6_+_48866601_48866625	0.15002	Sox2	ENSRNOT00000077321|Pxdn|ENSRNOG00000060614|peroxidasin [Source:RGD Symbol%3BAcc:1560694]	ENSRNOT00000079891|Pxdn|ENSRNOG00000060614|peroxidasin [Source:RGD Symbol%3BAcc:1560694]
rn6_v1_chr10_+_59360765_59360765	0.14922	Sox2	ENSRNOT00000036278|Zzef1|ENSRNOG00000024535|zinc finger ZZ-type and EF-hand domain containing 1 [Source:RGD Symbol%3BAcc:1311189]
rn6_v1_chr3_-_105663457_105663457	0.14913	Sox2	ENSRNOT00000067646|Zfp770|ENSRNOG00000043037|zinc finger protein 770 [Source:RGD Symbol%3BAcc:1597283]
rn6_v1_chr2_-_196377883_196377883	0.148502	Sox2	ENSRNOT00000028661|Gabpb2|ENSRNOG00000021105|GA binding protein transcription factor%2C beta subunit 2 [Source:RGD Symbol%3BAcc:1565234]
rn6_v1_chr11_-_25078740_25078740	0.147846	Sox2	ENSRNOT00000002109|Cyyr1|ENSRNOG00000001544|cysteine and tyrosine rich 1 [Source:RGD Symbol%3BAcc:1359578]
rn6_v1_chr7_-_36408588_36408588	0.147829	Sox2	ENSRNOT00000063946|Cradd|ENSRNOG00000008507|CASP2 and RIPK1 domain containing adaptor with death domain [Source:RGD Symbol%3BAcc:1311010]
rn6_v1_chr1_-_198316882_198316915	0.147731	Sox2	ENSRNOT00000085304|Taok2|ENSRNOG00000019964|TAO kinase 2 [Source:RGD Symbol%3BAcc:621590]	ENSRNOT00000064985|Taok2|ENSRNOG00000019964|TAO kinase 2 [Source:RGD Symbol%3BAcc:621590]
rn6_v1_chr5_+_4373626_4373626	0.147658	Sox2	ENSRNOT00000064946|Eya1|ENSRNOG00000007590|EYA transcriptional coactivator and phosphatase 1 [Source:RGD Symbol%3BAcc:1584849]
rn6_v1_chr5_+_58359498_58359498	0.147522	Sox2	ENSRNOT00000000141|Phf24|ENSRNOG00000000129|PHD finger protein 24 [Source:RGD Symbol%3BAcc:1559864]
rn6_v1_chr3_-_15278645_15278645	0.147356	Sox2	ENSRNOT00000032204|Ttll11|ENSRNOG00000019339|tubulin tyrosine ligase like11 [Source:RGD Symbol%3BAcc:1588742]
rn6_v1_chr7_-_116161708_116161708	0.147334	Sox2	ENSRNOT00000068707|Cyp11b2|ENSRNOG00000030111|cytochrome P450%2C family 11%2C subfamily b%2C polypeptide 2 [Source:RGD Symbol%3BAcc:2454]
rn6_v1_chr4_+_179398621_179398639	0.147269	Sox2	ENSRNOT00000049474|Lrmp|ENSRNOG00000029308|lymphoid-restricted membrane protein [Source:RGD Symbol%3BAcc:1562062]	ENSRNOT00000067506|Lrmp|ENSRNOG00000029308|lymphoid-restricted membrane protein [Source:RGD Symbol%3BAcc:1562062]
rn6_v1_chr12_-_38691075_38691075	0.147166	Sox2	ENSRNOT00000084192|Bcl7a|ENSRNOG00000056017|BCL tumor suppressor 7A [Source:RGD Symbol%3BAcc:1585128]
rn6_v1_chr11_-_81444375_81444621	0.146911	Sox2	ENSRNOT00000058479|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000078131|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000080949|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000080562|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]	ENSRNOT00000084867|Kng1|ENSRNOG00000030387|kininogen 1 [Source:RGD Symbol%3BAcc:1359376]
rn6_v1_chr1_+_220071811_220071811	0.146768	Sox2	ENSRNOT00000090642|AC126581.1|ENSRNOG00000058291|
rn6_v1_chr12_+_21767606_21767606	0.146562	Sox2	ENSRNOT00000059602|LOC103691013|ENSRNOG00000050511|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1-like [Source:RGD Symbol%3BAcc:9219688]
rn6_v1_chr14_+_8080565_8080565	0.145851	Sox2	ENSRNOT00000092395|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]
rn6_v1_chr6_-_27643076_27643076	0.145484	Sox2	ENSRNOT00000074348|Garem2|ENSRNOG00000048004|GRB2 associated regulator of MAPK1 subtype 2 [Source:RGD Symbol%3BAcc:1597138]
rn6_v1_chr18_+_14756684_14756684	0.145202	Sox2	ENSRNOT00000076085|Mapre2|ENSRNOG00000047261|microtubule-associated protein%2C RP/EB family%2C member 2 [Source:RGD Symbol%3BAcc:1590736]	ENSRNOT00000076129|Mapre2|ENSRNOG00000047261|microtubule-associated protein%2C RP/EB family%2C member 2 [Source:RGD Symbol%3BAcc:1590736]
rn6_v1_chr9_+_2190915_2190915	0.144878	Sox2	ENSRNOT00000077417|Satb1|ENSRNOG00000012942|SATB homeobox 1 [Source:RGD Symbol%3BAcc:1305561]
rn6_v1_chr8_+_71591360_71591360	0.144781	Sox2	ENSRNOT00000090096|Csnk1g1|ENSRNOG00000016620|casein kinase 1%2C gamma 1 [Source:RGD Symbol%3BAcc:621404]
rn6_v1_chr6_+_119519714_119519714	0.14432	Sox2	ENSRNOT00000004955|Flrt2|ENSRNOG00000003732|fibronectin leucine rich transmembrane protein 2 [Source:RGD Symbol%3BAcc:1308574]
rn6_v1_chr1_+_25174456_25174456	0.144295	Sox2	ENSRNOT00000092830|Clvs2|ENSRNOG00000012122|clavesin 2 [Source:RGD Symbol%3BAcc:1306801]
rn6_v1_chr14_-_21128505_21128505	0.144282	Sox2	ENSRNOT00000004776|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]
rn6_v1_chr14_-_20953095_20953095	0.144058	Sox2	ENSRNOT00000004440|Dck|ENSRNOG00000003296|deoxycytidine kinase [Source:RGD Symbol%3BAcc:620667]
rn6_v1_chr5_-_25721072_25721072	0.143861	Sox2	ENSRNOT00000021839|Tmem67|ENSRNOG00000016187|transmembrane protein 67 [Source:RGD Symbol%3BAcc:1586167]
rn6_v1_chr1_+_78876205_78876205	0.143727	Sox2	ENSRNOT00000022610|Pnmal2|ENSRNOG00000016863|paraneoplastic Ma antigen family-like 2 [Source:RGD Symbol%3BAcc:1560435]
rn6_v1_chr18_-_18079560_18079560	0.142438	Sox2	ENSRNOT00000072093|AABR07031533.1|ENSRNOG00000049802|
rn6_v1_chr20_-_14545772_14545772	0.142316	Sox2	ENSRNOT00000001766|Bcr|ENSRNOG00000001304|BCR%2C RhoGEF and GTPase activating protein [Source:RGD Symbol%3BAcc:1307993]
rn6_v1_chr2_-_116413043_116413043	0.142284	Sox2	ENSRNOT00000078148|Mynn|ENSRNOG00000027923|myoneurin [Source:RGD Symbol%3BAcc:1307889]
rn6_v1_chr18_-_74485139_74485139	0.141939	Sox2	ENSRNOT00000022598|Slc14a1|ENSRNOG00000016753|solute carrier family 14 member 1 [Source:RGD Symbol%3BAcc:3688]
rn6_v1_chr7_-_140600818_140600818	0.14134	Sox2	ENSRNOT00000082375|Lmbr1l|ENSRNOG00000061607|limb development membrane protein 1-like [Source:RGD Symbol%3BAcc:1309631]
rn6_v1_chr2_-_177924970_177924970	0.14124	Sox2	ENSRNOT00000029340|Rapgef2|ENSRNOG00000021581|Rap guanine nucleotide exchange factor 2 [Source:RGD Symbol%3BAcc:1306434]
rn6_v1_chr3_-_123849788_123849788	0.141027	Sox2	ENSRNOT00000028869|Rnf24|ENSRNOG00000021250|ring finger protein 24 [Source:RGD Symbol%3BAcc:1309384]
rn6_v1_chr1_-_88162583_88162583	0.140828	Sox2	ENSRNOT00000087411|Catsperg|ENSRNOG00000060693|cation channel sperm associated auxiliary subunit gamma [Source:RGD Symbol%3BAcc:1310942]
rn6_v1_chr15_-_41316203_41316203	0.140525	Sox2	ENSRNOT00000065261|Tnfrsf19|ENSRNOG00000014265|TNF receptor superfamily member 19 [Source:RGD Symbol%3BAcc:1564996]
rn6_v1_chr14_+_11988671_11988671	0.140238	Sox2	ENSRNOT00000003207|Rasgef1b|ENSRNOG00000002345|RasGEF domain family%2C member 1B [Source:RGD Symbol%3BAcc:1562220]
rn6_v1_chr5_+_139468546_139468546	0.140232	Sox2	ENSRNOT00000013193|Slfnl1|ENSRNOG00000009906|schlafen-like 1 [Source:RGD Symbol%3BAcc:1564075]
rn6_v1_chr7_+_25039335_25039335	0.139391	Sox2	ENSRNOT00000010636|Nuak1|ENSRNOG00000008061|NUAK family kinase 1 [Source:RGD Symbol%3BAcc:1309956]
rn6_v1_chrX_-_73778595_73778674	0.139363	Sox2	ENSRNOT00000076081|Rlim|ENSRNOG00000002824|ring finger protein%2C LIM domain interacting [Source:RGD Symbol%3BAcc:1559832]	ENSRNOT00000075926|Rlim|ENSRNOG00000002824|ring finger protein%2C LIM domain interacting [Source:RGD Symbol%3BAcc:1559832]	ENSRNOT00000003782|Rlim|ENSRNOG00000002824|ring finger protein%2C LIM domain interacting [Source:RGD Symbol%3BAcc:1559832]
rn6_v1_chr10_-_90393317_90393317	0.139177	Sox2	ENSRNOT00000028563|Fam171a2|ENSRNOG00000021041|family with sequence similarity 171%2C member A2 [Source:RGD Symbol%3BAcc:1307966]
rn6_v1_chr12_+_19231092_19231092	0.139002	Sox2	ENSRNOT00000045379|Zkscan1|ENSRNOG00000001335|zinc finger with KRAB and SCAN domains 1 [Source:RGD Symbol%3BAcc:1560616]
rn6_v1_chr16_-_19894591_19894591	0.138532	Sox2	ENSRNOT00000085940|Ano8|ENSRNOG00000058662|anoctamin 8 [Source:RGD Symbol%3BAcc:1563946]
rn6_v1_chr9_-_112027155_112027240	0.137511	Sox2	ENSRNOT00000021258|Pja2|ENSRNOG00000015528|praja ring finger ubiquitin ligase 2 [Source:RGD Symbol%3BAcc:620273]	ENSRNOT00000080962|Pja2|ENSRNOG00000015528|praja ring finger ubiquitin ligase 2 [Source:RGD Symbol%3BAcc:620273]
rn6_v1_chr4_+_157594436_157594436	0.1372	Sox2	ENSRNOT00000029053|Lpar5|ENSRNOG00000021401|lysophosphatidic acid receptor 5 [Source:RGD Symbol%3BAcc:1562580]
rn6_v1_chr15_-_30147793_30147793	0.137141	Sox2	ENSRNOT00000060399|AABR07017693.1|ENSRNOG00000052828|
rn6_v1_chr14_-_114868328_114868328	0.136937	Sox2	ENSRNOT00000034584|RGD1562229|ENSRNOG00000006356|similar to hypothetical protein FLJ40298 [Source:RGD Symbol%3BAcc:1562229]
rn6_v1_chr2_+_226900619_226900619	0.136627	Sox2	ENSRNOT00000019638|Pde5a|ENSRNOG00000014443|phosphodiesterase 5A [Source:RGD Symbol%3BAcc:620995]
rn6_v1_chr8_+_129617812_129617812	0.136114	Sox2	ENSRNOT00000079085|Ctnnb1|ENSRNOG00000054172|catenin beta 1 [Source:RGD Symbol%3BAcc:70487]
rn6_v1_chr17_-_84830185_84830185	0.135818	Sox2	ENSRNOT00000040697|Skida1|ENSRNOG00000033330|SKI/DACH domain containing 1 [Source:RGD Symbol%3BAcc:1588196]
rn6_v1_chr12_-_40227297_40227297	0.134963	Sox2	ENSRNOT00000030600|Fam109a|ENSRNOG00000028206|family with sequence similarity 109%2C member A [Source:RGD Symbol%3BAcc:1310656]
rn6_v1_chr16_+_83206004_83206004	0.134818	Sox2	ENSRNOT00000018870|Ankrd10|ENSRNOG00000013618|ankyrin repeat domain 10 [Source:RGD Symbol%3BAcc:1310501]
rn6_v1_chr19_+_22450030_22450030	0.134673	Sox2	ENSRNOT00000021739|Neto2|ENSRNOG00000016245|neuropilin and tolloid like 2 [Source:RGD Symbol%3BAcc:1305310]
rn6_v1_chr16_+_67350539_67350580	0.134433	Sox2	ENSRNOT00000085659|Unc5d|ENSRNOG00000011858|unc-5 netrin receptor D [Source:RGD Symbol%3BAcc:1309245]	ENSRNOT00000015879|Unc5d|ENSRNOG00000011858|unc-5 netrin receptor D [Source:RGD Symbol%3BAcc:1309245]
rn6_v1_chr17_-_4454701_4454778	0.134339	Sox2	ENSRNOT00000080750|Dapk1|ENSRNOG00000018198|death associated protein kinase 1 [Source:RGD Symbol%3BAcc:1311629]	ENSRNOT00000066950|Dapk1|ENSRNOG00000018198|death associated protein kinase 1 [Source:RGD Symbol%3BAcc:1311629]
rn6_v1_chr8_-_39551700_39551700	0.132875	Sox2	ENSRNOT00000091894|Pknox2|ENSRNOG00000028856|PBX/knotted 1 homeobox 2 [Source:RGD Symbol%3BAcc:1590611]	ENSRNOT00000076025|Pknox2|ENSRNOG00000028856|PBX/knotted 1 homeobox 2 [Source:RGD Symbol%3BAcc:1590611]
rn6_v1_chr10_+_17421075_17421075	0.132684	Sox2	ENSRNOT00000047011|Stk10|ENSRNOG00000004217|serine/threonine kinase 10 [Source:RGD Symbol%3BAcc:3779]
rn6_v1_chr7_-_101138860_101138860	0.132521	Sox2	ENSRNOT00000077137|AABR07058124.4|ENSRNOG00000055178|
rn6_v1_chr11_-_72378895_72378895	0.132271	Sox2	ENSRNOT00000058885|Dlg1|ENSRNOG00000038597|discs large MAGUK scaffold protein 1 [Source:RGD Symbol%3BAcc:2505]
rn6_v1_chr3_-_9037942_9037942	0.131394	Sox2	ENSRNOT00000036770|Ier5l|ENSRNOG00000024846|immediate early response 5-like [Source:RGD Symbol%3BAcc:1561058]
rn6_v1_chr1_+_219000844_219000844	0.131385	Sox2	ENSRNOT00000022486|Kmt5b|ENSRNOG00000016790|lysine methyltransferase 5B [Source:RGD Symbol%3BAcc:1311637]
rn6_v1_chr13_-_53224768_53224768	0.130951	Sox2	ENSRNOT00000091015|Camsap2|ENSRNOG00000008741|calmodulin regulated spectrin-associated protein family%2C member 2 [Source:RGD Symbol%3BAcc:1310950]
rn6_v1_chr14_+_63095720_63095720	0.130871	Sox2	ENSRNOT00000006071|Ppargc1a|ENSRNOG00000004473|PPARG coactivator 1 alpha [Source:RGD Symbol%3BAcc:620925]
rn6_v1_chr9_-_116222374_116222440	0.130724	Sox2	ENSRNOT00000090111|Arhgap28|ENSRNOG00000017065|Rho GTPase activating protein 28 [Source:RGD Symbol%3BAcc:1559882]	ENSRNOT00000067900|Arhgap28|ENSRNOG00000017065|Rho GTPase activating protein 28 [Source:RGD Symbol%3BAcc:1559882]
rn6_v1_chr18_-_69671199_69671199	0.130719	Sox2	ENSRNOT00000082484|Smad4|ENSRNOG00000051965|SMAD family member 4 [Source:RGD Symbol%3BAcc:3033]
rn6_v1_chr1_+_25173242_25173242	0.130475	Sox2	ENSRNOT00000016518|Clvs2|ENSRNOG00000012122|clavesin 2 [Source:RGD Symbol%3BAcc:1306801]
rn6_v1_chr13_-_89242443_89242443	0.130301	Sox2	ENSRNOT00000029202|Atf6|ENSRNOG00000024632|activating transcription factor 6 [Source:RGD Symbol%3BAcc:1305471]
rn6_v1_chr7_+_145068286_145068290	0.129972	Sox2	ENSRNOT00000088956|Nckap1l|ENSRNOG00000036829|NCK associated protein 1 like [Source:RGD Symbol%3BAcc:1312032]	ENSRNOT00000065753|Nckap1l|ENSRNOG00000036829|NCK associated protein 1 like [Source:RGD Symbol%3BAcc:1312032]
rn6_v1_chr13_+_49850189_49850189	0.129932	Sox2	ENSRNOT00000042125|Pik3c2b|ENSRNOG00000029938|phosphatidylinositol-4-phosphate 3-kinase%2C catalytic subunit type 2 beta [Source:RGD Symbol%3BAcc:1306541]
rn6_v1_chr1_-_68269117_68269117	0.129812	Sox2	ENSRNOT00000072367|LOC100911224|ENSRNOG00000046455|zinc finger protein interacting with ribonucleoprotein K-like [Source:RGD Symbol%3BAcc:6494420]
rn6_v1_chr11_-_71135493_71135493	0.129781	Sox2	ENSRNOT00000050535|Fyttd1|ENSRNOG00000034233|forty-two-three domain containing 1 [Source:RGD Symbol%3BAcc:1306899]
rn6_v1_chr9_+_46657575_46657575	0.129668	Sox2	ENSRNOT00000083322|Map4k4|ENSRNOG00000014013|mitogen-activated protein kinase kinase kinase kinase 4 [Source:RGD Symbol%3BAcc:1305322]
rn6_v1_chr11_+_84745904_84745904	0.129289	Sox2	ENSRNOT00000002617|Klhl6|ENSRNOG00000001908|kelch-like family member 6 [Source:RGD Symbol%3BAcc:1307521]
rn6_v1_chr10_+_61432819_61432850	0.128922	Sox2	ENSRNOT00000003687|Cluh|ENSRNOG00000002669|clustered mitochondria homolog [Source:RGD Symbol%3BAcc:1307222]	ENSRNOT00000092478|Cluh|ENSRNOG00000002669|clustered mitochondria homolog [Source:RGD Symbol%3BAcc:1307222]
rn6_v1_chr1_-_169534896_169534896	0.128858	Sox2	ENSRNOT00000082645|Trim30c|ENSRNOG00000017191|tripartite motif-containing 30C [Source:RGD Symbol%3BAcc:1566132]
rn6_v1_chrX_+_62727755_62727755	0.128759	Sox2	ENSRNOT00000077055|Pcyt1b|ENSRNOG00000012358|phosphate cytidylyltransferase 1%2C choline%2C beta [Source:RGD Symbol%3BAcc:708434]
rn6_v1_chr9_+_54558202_54558202	0.128623	Sox2	ENSRNOT00000068433|Myo1b|ENSRNOG00000048152|myosin Ib [Source:RGD Symbol%3BAcc:70994]
rn6_v1_chr10_-_61744976_61745097	0.128533	Sox2	ENSRNOT00000079926|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]	ENSRNOT00000092314|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]	ENSRNOT00000034298|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]
rn6_v1_chr16_-_71319449_71319449	0.128108	Sox2	ENSRNOT00000029284|Fgfr1|ENSRNOG00000016050|Fibroblast growth factor receptor 1 [Source:RGD Symbol%3BAcc:620713]
rn6_v1_chr11_-_80650802_80650802	0.127985	Sox2	ENSRNOT00000043660|Rtp4|ENSRNOG00000028895|receptor (chemosensory) transporter protein 4 [Source:RGD Symbol%3BAcc:1306974]
rn6_v1_chr19_+_39543242_39543242	0.127843	Sox2	ENSRNOT00000018837|Wwp2|ENSRNOG00000012937|WW domain containing E3 ubiquitin protein ligase 2 [Source:RGD Symbol%3BAcc:1310091]
rn6_v1_chr18_+_55576239_55576239	0.127766	Sox2	ENSRNOT00000050063|LOC100910979|ENSRNOG00000019542|interferon-inducible GTPase 1-like [Source:RGD Symbol%3BAcc:6495625]
rn6_v1_chr2_-_220535751_220535751	0.127764	Sox2	ENSRNOT00000089082|Palmd|ENSRNOG00000058609|palmdelphin [Source:MGI Symbol%3BAcc:MGI:2148896]
rn6_v1_chr19_+_30794571_30794571	0.127229	Sox2	ENSRNOT00000024390|Gab1|ENSRNOG00000017879|GRB2-associated binding protein 1 [Source:RGD Symbol%3BAcc:1311085]	ENSRNOT00000083219|Gab1|ENSRNOG00000017879|GRB2-associated binding protein 1 [Source:RGD Symbol%3BAcc:1311085]
rn6_v1_chr20_+_3351303_3351304	0.127132	Sox2	ENSRNOT00000080419|Atat1|ENSRNOG00000000809|alpha tubulin acetyltransferase 1 [Source:RGD Symbol%3BAcc:1303066]	ENSRNOT00000001065|Atat1|ENSRNOG00000000809|alpha tubulin acetyltransferase 1 [Source:RGD Symbol%3BAcc:1303066]	ENSRNOT00000086503|Atat1|ENSRNOG00000000809|alpha tubulin acetyltransferase 1 [Source:RGD Symbol%3BAcc:1303066]
rn6_v1_chr9_+_1313209_1313209	0.126661	Sox2	ENSRNOT00000083387|Tbc1d5|ENSRNOG00000010637|TBC1 domain family%2C member 5 [Source:RGD Symbol%3BAcc:1561626]
rn6_v1_chr6_+_132383337_132383370	0.12665	Sox2	ENSRNOT00000071733|Eml1|ENSRNOG00000043143|echinoderm microtubule associated protein like 1 [Source:RGD Symbol%3BAcc:1306374]	ENSRNOT00000071863|Eml1|ENSRNOG00000043143|echinoderm microtubule associated protein like 1 [Source:RGD Symbol%3BAcc:1306374]
rn6_v1_chrX_-_152641679_152641679	0.125897	Sox2	ENSRNOT00000080277|Gabra3|ENSRNOG00000056558|gamma-aminobutyric acid type A receptor alpha3 subunit [Source:RGD Symbol%3BAcc:2648]
rn6_v1_chr2_+_241029693_241029693	0.124345	Sox2	ENSRNOT00000033413|Slc39a8|ENSRNOG00000012508|solute carrier family 39 member 8 [Source:RGD Symbol%3BAcc:1308236]
rn6_v1_chr2_+_2729829_2729829	0.124261	Sox2	ENSRNOT00000017068|Spata9|ENSRNOG00000012770|spermatogenesis associated 9 [Source:RGD Symbol%3BAcc:1308291]
rn6_v1_chr4_+_84597323_84597323	0.123403	Sox2	ENSRNOT00000074054|Wipf3|ENSRNOG00000009571|WAS/WASL interacting protein family%2C member 3 [Source:RGD Symbol%3BAcc:708559]	ENSRNOT00000012755|Wipf3|ENSRNOG00000009571|WAS/WASL interacting protein family%2C member 3 [Source:RGD Symbol%3BAcc:708559]
rn6_v1_chr2_-_33025271_33025271	0.123022	Sox2	ENSRNOT00000074941|NEWGENE_1310139|ENSRNOG00000027002|microtubule associated serine/threonine kinase family member 4 [Source:RGD Symbol%3BAcc:9344213]
rn6_v1_chr17_+_8135251_8135251	0.122974	Sox2	ENSRNOT00000016982|Trpc7|ENSRNOG00000012727|transient receptor potential cation channel%2C subfamily C%2C member 7 [Source:RGD Symbol%3BAcc:628820]
rn6_v1_chr6_+_73358112_73358112	0.122948	Sox2	ENSRNOT00000041373|Arhgap5|ENSRNOG00000004696|Rho GTPase activating protein 5 [Source:RGD Symbol%3BAcc:1308507]
rn6_v1_chr10_+_86157608_86157742	0.122712	Sox2	ENSRNOT00000082668|Cdk12|ENSRNOG00000006000|cyclin-dependent kinase 12 [Source:RGD Symbol%3BAcc:621111]	ENSRNOT00000008256|Cdk12|ENSRNOG00000006000|cyclin-dependent kinase 12 [Source:RGD Symbol%3BAcc:621111]
rn6_v1_chr3_+_151126591_151126591	0.122656	Sox2	ENSRNOT00000025859|Myh7b|ENSRNOG00000018997|myosin heavy chain 7B [Source:RGD Symbol%3BAcc:1307994]
rn6_v1_chr18_+_24397369_24397369	0.122536	Sox2	ENSRNOT00000022761|Sap130|ENSRNOG00000016773|Sin3A associated protein 130 [Source:RGD Symbol%3BAcc:1311657]
rn6_v1_chr13_+_98615287_98615287	0.122447	Sox2	ENSRNOT00000004032|Itpkb|ENSRNOG00000002969|inositol-trisphosphate 3-kinase B [Source:RGD Symbol%3BAcc:2932]
rn6_v1_chr10_+_78168715_78168715	0.121689	Sox2	ENSRNOT00000072294|Cox11|ENSRNOG00000052096|COX11 cytochrome c oxidase copper chaperone [Source:RGD Symbol%3BAcc:1309822]
rn6_v1_chr8_-_111984572_111984572	0.121265	Sox2	ENSRNOT00000014519|Tmem108|ENSRNOG00000010911|transmembrane protein 108 [Source:RGD Symbol%3BAcc:1311530]
rn6_v1_chr15_+_34282936_34282936	0.120785	Sox2	ENSRNOT00000026364|Irf9|ENSRNOG00000019478|interferon regulatory factor 9 [Source:RGD Symbol%3BAcc:1308766]
rn6_v1_chr7_-_29378080_29378080	0.120191	Sox2	ENSRNOT00000008317|Utp20|ENSRNOG00000005823|UTP20 small subunit processome component [Source:RGD Symbol%3BAcc:1560606]
rn6_v1_chr1_+_265809754_265809754	0.120102	Sox2	ENSRNOT00000025221|Pprc1|ENSRNOG00000018561|peroxisome proliferator-activated receptor gamma%2C coactivator-related 1 [Source:RGD Symbol%3BAcc:1309688]
rn6_v1_chr17_+_6935860_6935860	0.119905	Sox2	ENSRNOT00000034877|Klhl3|ENSRNOG00000019533|kelch-like family member 3 [Source:RGD Symbol%3BAcc:1565218]
rn6_v1_chr16_+_21444638_21444638	0.119691	Sox2	ENSRNOT00000015611|Zfp869|ENSRNOG00000033351|zinc finger protein 869 [Source:RGD Symbol%3BAcc:2320746]
rn6_v1_chr15_+_3996048_3996048	0.119609	Sox2	ENSRNOT00000078653|Ndst2|ENSRNOG00000057755|N-deacetylase and N-sulfotransferase 2 [Source:RGD Symbol%3BAcc:1304700]
rn6_v1_chr1_-_215846911_215846911	0.119552	Sox2	ENSRNOT00000089171|Igf2|ENSRNOG00000020369|insulin-like growth factor 2 [Source:RGD Symbol%3BAcc:2870]
rn6_v1_chr1_+_65564173_65564173	0.119528	Sox2	ENSRNOT00000038860|Zbtb45|ENSRNOG00000027459|zinc finger and BTB domain containing 45 [Source:RGD Symbol%3BAcc:1310920]
rn6_v1_chr1_-_228753422_228753422	0.119044	Sox2	ENSRNOT00000028626|Dtx4|ENSRNOG00000021086|deltex E3 ubiquitin ligase 4 [Source:RGD Symbol%3BAcc:1311767]
rn6_v1_chr14_-_2032593_2032593	0.118991	Sox2	ENSRNOT00000000037|Fgfrl1|ENSRNOG00000024207|fibroblast growth factor receptor-like 1 [Source:RGD Symbol%3BAcc:735156]
rn6_v1_chr6_-_76608864_76608864	0.118909	Sox2	ENSRNOT00000010824|Ralgapa1|ENSRNOG00000046256|Ral GTPase activating protein catalytic alpha subunit 1 [Source:RGD Symbol%3BAcc:620642]
rn6_v1_chr14_-_60552990_60552990	0.118734	Sox2	ENSRNOT00000042757|Zcchc4|ENSRNOG00000029064|zinc finger CCHC-type containing 4 [Source:RGD Symbol%3BAcc:1311414]
rn6_v1_chr3_+_8498122_8498122	0.11864	Sox2	ENSRNOT00000020630|Gle1|ENSRNOG00000015237|GLE1 RNA export mediator [Source:RGD Symbol%3BAcc:1307329]
rn6_v1_chr20_-_27657983_27657983	0.118546	Sox2	ENSRNOT00000057313|Fam26e|ENSRNOG00000000825|family with sequence similarity 26%2C member E [Source:RGD Symbol%3BAcc:1310405]
rn6_v1_chr4_-_68597586_68597586	0.117959	Sox2	ENSRNOT00000015921|RGD1563986|ENSRNOG00000011854|similar to RIKEN cDNA E330009J07 gene [Source:RGD Symbol%3BAcc:1563986]
rn6_v1_chr4_-_40036563_40036563	0.117905	Sox2	ENSRNOT00000084531|Tmem168|ENSRNOG00000057290|transmembrane protein 168 [Source:RGD Symbol%3BAcc:1307778]
rn6_v1_chr1_-_6970040_6970040	0.117294	Sox2	ENSRNOT00000016273|Utrn|ENSRNOG00000011058|utrophin [Source:RGD Symbol%3BAcc:3947]
rn6_v1_chr17_-_51912496_51912496	0.117279	Sox2	ENSRNOT00000019272|Inhba|ENSRNOG00000014320|inhibin beta A subunit [Source:RGD Symbol%3BAcc:62074]
rn6_v1_chr13_-_51076852_51076852	0.116961	Sox2	ENSRNOT00000078993|Adora1|ENSRNOG00000003442|adenosine A1 receptor [Source:RGD Symbol%3BAcc:2048]
rn6_v1_chr2_-_125323454_125323454	0.116846	Sox2	ENSRNOT00000045837|Ankrd50|ENSRNOG00000010534|ankyrin repeat domain 50 [Source:RGD Symbol%3BAcc:1311665]
rn6_v1_chr12_+_2140203_2140203	0.116799	Sox2	ENSRNOT00000084906|Camsap3|ENSRNOG00000000986|calmodulin regulated spectrin-associated protein family%2C member 3 [Source:RGD Symbol%3BAcc:1597412]
rn6_v1_chr5_-_173611202_173611202	0.116491	Sox2	ENSRNOT00000047854|Agrn|ENSRNOG00000020205|agrin [Source:RGD Symbol%3BAcc:2067]
rn6_v1_chr3_-_9447813_9447813	0.116456	Sox2	ENSRNOT00000043661|Abl1|ENSRNOG00000009371|ABL proto-oncogene 1%2C non-receptor tyrosine kinase [Source:RGD Symbol%3BAcc:1584969]
rn6_v1_chr9_-_61810417_61810417	0.116	Sox2	ENSRNOT00000020910|Rftn2|ENSRNOG00000015594|raftlin family member 2 [Source:RGD Symbol%3BAcc:1307304]
rn6_v1_chr5_+_105114433_105114433	0.115992	Sox2	ENSRNOT00000058429|Dennd4c|ENSRNOG00000008036|DENN domain containing 4C [Source:RGD Symbol%3BAcc:1308489]	ENSRNOT00000082596|Dennd4c|ENSRNOG00000008036|DENN domain containing 4C [Source:RGD Symbol%3BAcc:1308489]
rn6_v1_chr6_-_104409005_104409005	0.115859	Sox2	ENSRNOT00000040965|Ccdc177|ENSRNOG00000033973|coiled-coil domain containing 177 [Source:RGD Symbol%3BAcc:1561115]
rn6_v1_chr17_+_5225835_5225835	0.115296	Sox2	ENSRNOT00000022373|Zcchc6|ENSRNOG00000016629|zinc finger CCHC-type containing 6 [Source:RGD Symbol%3BAcc:1586015]
rn6_v1_chr20_-_5153399_5153399	0.114566	Sox2	ENSRNOT00000001133|Prrc2a|ENSRNOG00000000852|proline-rich coiled-coil 2A [Source:RGD Symbol%3BAcc:1303025]
rn6_v1_chr15_+_675085_675085	0.114562	Sox2	ENSRNOT00000091318|Kcnma1|ENSRNOG00000005985|potassium calcium-activated channel subfamily M alpha 1 [Source:RGD Symbol%3BAcc:620715]
rn6_v1_chr2_+_205783252_205783252	0.114456	Sox2	ENSRNOT00000025633|Trim33|ENSRNOG00000018946|tripartite motif-containing 33 [Source:RGD Symbol%3BAcc:1307339]	ENSRNOT00000025600|Trim33|ENSRNOG00000018946|tripartite motif-containing 33 [Source:RGD Symbol%3BAcc:1307339]
rn6_v1_chr2_-_23909016_23909016	0.114451	Sox2	ENSRNOT00000084044|Scamp1|ENSRNOG00000061582|secretory carrier membrane protein 1 [Source:RGD Symbol%3BAcc:3625]
rn6_v1_chr9_+_111279495_111279495	0.114201	Sox2	ENSRNOT00000072791|Ppip5k2|ENSRNOG00000011613|diphosphoinositol pentakisphosphate kinase 2 [Source:RGD Symbol%3BAcc:1590765]
rn6_v1_chr2_+_86996497_86996497	0.114158	Sox2	ENSRNOT00000042058|Zfp455|ENSRNOG00000031576|zinc finger protein 455 [Source:RGD Symbol%3BAcc:628788]
rn6_v1_chr1_-_63293635_63293635	0.11399	Sox2	ENSRNOT00000090337|Zik1|ENSRNOG00000055843|zinc finger protein interacting with K protein 1 [Source:RGD Symbol%3BAcc:1590949]
rn6_v1_chr9_+_71230108_71230108	0.113881	Sox2	ENSRNOT00000018326|Creb1|ENSRNOG00000013412|cAMP responsive element binding protein 1 [Source:RGD Symbol%3BAcc:620218]
rn6_v1_chr1_-_131460473_131460473	0.113874	Sox2	ENSRNOT00000084336|Nr2f2|ENSRNOG00000010308|nuclear receptor subfamily 2%2C group F%2C member 2 [Source:RGD Symbol%3BAcc:69305]
rn6_v1_chr9_+_19880473_19880473	0.113631	Sox2	ENSRNOT00000052068|Slc25a27|ENSRNOG00000010592|solute carrier family 25%2C member 27 [Source:RGD Symbol%3BAcc:620787]
rn6_v1_chr14_-_36208278_36208373	0.113442	Sox2	ENSRNOT00000045050|Fip1l1|ENSRNOG00000002275|factor interacting with PAPOLA and CPSF1 [Source:RGD Symbol%3BAcc:1309336]	ENSRNOT00000088448|Fip1l1|ENSRNOG00000002275|factor interacting with PAPOLA and CPSF1 [Source:RGD Symbol%3BAcc:1309336]
rn6_v1_chr14_-_81679082_81679082	0.113206	Sox2	ENSRNOT00000077799|Rnf4|ENSRNOG00000013930|ring finger protein 4 [Source:RGD Symbol%3BAcc:3583]
rn6_v1_chr14_-_3446611_3446611	0.112762	Sox2	ENSRNOT00000080901|Brdt|ENSRNOG00000002073|bromodomain testis associated [Source:RGD Symbol%3BAcc:1306678]
rn6_v1_chr12_+_48316143_48316143	0.112752	Sox2	ENSRNOT00000084511|Svop|ENSRNOG00000000693|SV2 related protein [Source:RGD Symbol%3BAcc:620277]
rn6_v1_chr5_+_131380297_131380297	0.112616	Sox2	ENSRNOT00000010548|Agbl4|ENSRNOG00000008011|ATP/GTP binding protein-like 4 [Source:RGD Symbol%3BAcc:6493177]
rn6_v1_chr2_+_104744461_104744476	0.112502	Sox2	ENSRNOT00000016083|Cp|ENSRNOG00000011913|ceruloplasmin [Source:RGD Symbol%3BAcc:2387]	ENSRNOT00000082627|Cp|ENSRNOG00000011913|ceruloplasmin [Source:RGD Symbol%3BAcc:2387]
rn6_v1_chr5_+_121952977_121952977	0.112026	Sox2	ENSRNOT00000008278|Pde4b|ENSRNOG00000005905|phosphodiesterase 4B [Source:RGD Symbol%3BAcc:3280]
rn6_v1_chr17_-_10575203_10575203	0.111803	Sox2	ENSRNOT00000073186|Arl10|ENSRNOG00000045948|ADP-ribosylation factor like GTPase 10 [Source:RGD Symbol%3BAcc:1303298]
rn6_v1_chr1_-_65756528_65756528	0.111384	Sox2	ENSRNOT00000026298|Zfp110|ENSRNOG00000031328|zinc finger protein 110 [Source:RGD Symbol%3BAcc:1306339]
rn6_v1_chr13_+_101790865_101790865	0.110909	Sox2	ENSRNOT00000087784|Taf1a|ENSRNOG00000061139|TATA-box binding protein associated factor%2C RNA polymerase I subunit A [Source:RGD Symbol%3BAcc:1305698]
rn6_v1_chr7_+_13318533_13318533	0.110653	Sox2	ENSRNOT00000034545|LOC691170|ENSRNOG00000022871|similar to zinc finger protein 84 (HPF2) [Source:RGD Symbol%3BAcc:1587418]
rn6_v1_chr20_+_3552929_3552929	0.110362	Sox2	ENSRNOT00000083223|Ddr1|ENSRNOG00000057125|discoidin domain receptor tyrosine kinase 1 [Source:RGD Symbol%3BAcc:2252]
rn6_v1_chr1_+_101214593_101214593	0.109732	Sox2	ENSRNOT00000028086|Tead2|ENSRNOG00000020695|TEA domain transcription factor 2 [Source:RGD Symbol%3BAcc:1593252]
rn6_v1_chr10_-_25890639_25890639	0.109568	Sox2	ENSRNOT00000085499|Hmmr|ENSRNOG00000059894|hyaluronan-mediated motility receptor [Source:RGD Symbol%3BAcc:2805]
rn6_v1_chr17_+_82065937_82065937	0.109097	Sox2	ENSRNOT00000051349|Arl5b|ENSRNOG00000018714|ADP-ribosylation factor like GTPase 5B [Source:RGD Symbol%3BAcc:1305569]
rn6_v1_chr1_-_82266727_82266727	0.108971	Sox2	ENSRNOT00000027910|Lipe|ENSRNOG00000020546|lipase E%2C hormone sensitive type [Source:RGD Symbol%3BAcc:3010]
rn6_v1_chr9_-_38196273_38196273	0.108586	Sox2	ENSRNOT00000044452|Dst|ENSRNOG00000012207|dystonin [Source:RGD Symbol%3BAcc:1306566]
rn6_v1_chr7_-_130128589_130128604	0.108537	Sox2	ENSRNOT00000079777|Mapk11|ENSRNOG00000006984|mitogen-activated protein kinase 11 [Source:RGD Symbol%3BAcc:1309340]	ENSRNOT00000009325|Mapk11|ENSRNOG00000006984|mitogen-activated protein kinase 11 [Source:RGD Symbol%3BAcc:1309340]
rn6_v1_chr3_-_124610267_124610267	0.108359	Sox2	ENSRNOT00000028883|Rassf2|ENSRNOG00000021261|Ras association domain family member 2 [Source:RGD Symbol%3BAcc:1305551]
rn6_v1_chr7_-_36000906_36000906	0.107711	Sox2	ENSRNOT00000011178|Plxnc1|ENSRNOG00000007970|plexin C1 [Source:RGD Symbol%3BAcc:1307420]
rn6_v1_chr1_-_140262452_140262503	0.107688	Sox2	ENSRNOT00000046849|Ntrk3|ENSRNOG00000018674|neurotrophic receptor tyrosine kinase 3 [Source:RGD Symbol%3BAcc:3214]	ENSRNOT00000045165|Ntrk3|ENSRNOG00000018674|neurotrophic receptor tyrosine kinase 3 [Source:RGD Symbol%3BAcc:3214]	ENSRNOT00000025536|Ntrk3|ENSRNOG00000018674|neurotrophic receptor tyrosine kinase 3 [Source:RGD Symbol%3BAcc:3214]	ENSRNOT00000041839|Ntrk3|ENSRNOG00000018674|neurotrophic receptor tyrosine kinase 3 [Source:RGD Symbol%3BAcc:3214]
rn6_v1_chr13_+_98924962_98924962	0.107675	Sox2	ENSRNOT00000074148|Lin9|ENSRNOG00000023304|lin-9 DREAM MuvB core complex component [Source:RGD Symbol%3BAcc:1591104]
rn6_v1_chr13_-_111849653_111849653	0.107568	Sox2	ENSRNOT00000006395|Diexf|ENSRNOG00000004789|digestive organ expansion factor homolog (zebrafish) [Source:RGD Symbol%3BAcc:1359148]
rn6_v1_chr15_-_39742103_39742103	0.107047	Sox2	ENSRNOT00000074587|Setdb2|ENSRNOG00000021680|SET domain%2C bifurcated 2 [Source:RGD Symbol%3BAcc:2319564]	ENSRNOT00000036781|Setdb2|ENSRNOG00000021680|SET domain%2C bifurcated 2 [Source:RGD Symbol%3BAcc:2319564]	ENSRNOT00000071919|Setdb2|ENSRNOG00000021680|SET domain%2C bifurcated 2 [Source:RGD Symbol%3BAcc:2319564]
rn6_v1_chr1_+_69841998_69841998	0.107044	Sox2	ENSRNOT00000072231|Zfp773-ps1|ENSRNOG00000047061|zinc finger protein 773%2C pseudogene 1 [Source:RGD Symbol%3BAcc:1563793]
rn6_v1_chr4_+_57019941_57019941	0.106754	Sox2	ENSRNOT00000011356|Smo|ENSRNOG00000008332|smoothened%2C frizzled class receptor [Source:RGD Symbol%3BAcc:3726]
rn6_v1_chr12_+_9360672_9360672	0.106636	Sox2	ENSRNOT00000088957|Flt3|ENSRNOG00000054764|fms-related tyrosine kinase 3 [Source:RGD Symbol%3BAcc:61308]
rn6_v1_chr8_+_94122728_94122728	0.106183	Sox2	ENSRNOT00000014783|Dopey1|ENSRNOG00000022847|dopey family member 1 [Source:RGD Symbol%3BAcc:1305534]
rn6_v1_chr3_+_21698032_21698032	0.10614	Sox2	ENSRNOT00000013378|Rabgap1|ENSRNOG00000009402|RAB GTPase activating protein 1 [Source:RGD Symbol%3BAcc:1304691]
rn6_v1_chr1_-_169456098_169456098	0.106103	Sox2	ENSRNOT00000030827|Trim30c|ENSRNOG00000017191|tripartite motif-containing 30C [Source:RGD Symbol%3BAcc:1566132]
rn6_v1_chr8_-_48564722_48564722	0.105988	Sox2	ENSRNOT00000067902|Cbl|ENSRNOG00000008444|Cbl proto-oncogene [Source:RGD Symbol%3BAcc:1561386]
rn6_v1_chr8_+_33239139_33239139	0.105544	Sox2	ENSRNOT00000011589|Arhgap32|ENSRNOG00000008709|Rho GTPase activating protein 32 [Source:RGD Symbol%3BAcc:1305267]
rn6_v1_chr10_-_74376270_74376270	0.10534	Sox2	ENSRNOT00000079311|Gdpd1|ENSRNOG00000060561|glycerophosphodiester phosphodiesterase domain containing 1 [Source:RGD Symbol%3BAcc:1311813]
rn6_v1_chr5_+_122100099_122100099	0.105334	Sox2	ENSRNOT00000007738|Pde4b|ENSRNOG00000005905|phosphodiesterase 4B [Source:RGD Symbol%3BAcc:3280]
rn6_v1_chr9_+_71915421_71915421	0.104966	Sox2	ENSRNOT00000020447|Pikfyve|ENSRNOG00000015158|phosphoinositide kinase%2C FYVE-type zinc finger containing [Source:RGD Symbol%3BAcc:1592067]
rn6_v1_chr1_-_80471527_80471527	0.104805	Sox2	ENSRNOT00000023867|Ppp1r37|ENSRNOG00000017692|protein phosphatase 1%2C regulatory subunit 37 [Source:RGD Symbol%3BAcc:1595870]
rn6_v1_chr8_+_52753011_52753011	0.10469	Sox2	ENSRNOT00000047264|Nxpe1|ENSRNOG00000027730|neurexophilin and PC-esterase domain family%2C member 1 [Source:RGD Symbol%3BAcc:1566243]
rn6_v1_chr11_+_3119885_3119885	0.104687	Sox2	ENSRNOT00000042316|Vgll3|ENSRNOG00000028774|vestigial-like family member 3 [Source:RGD Symbol%3BAcc:1560030]
rn6_v1_chrX_+_140878216_140878216	0.104365	Sox2	ENSRNOT00000075840|Zic3|ENSRNOG00000000861|Zic family member 3 [Source:RGD Symbol%3BAcc:1561261]	ENSRNOT00000077026|Zic3|ENSRNOG00000000861|Zic family member 3 [Source:RGD Symbol%3BAcc:1561261]
rn6_v1_chr9_-_47516460_47516460	0.104342	Sox2	ENSRNOT00000038915|Mfsd9|ENSRNOG00000023129|major facilitator superfamily domain containing 9 [Source:RGD Symbol%3BAcc:1562212]
rn6_v1_chr6_-_92527711_92527711	0.104267	Sox2	ENSRNOT00000007529|Nin|ENSRNOG00000005540|ninein [Source:RGD Symbol%3BAcc:1306492]
rn6_v1_chr3_-_148312791_148312791	0.104219	Sox2	ENSRNOT00000091419|Bcl2l1|ENSRNOG00000007946|Bcl2-like 1 [Source:RGD Symbol%3BAcc:2200]
rn6_v1_chr20_-_30748784_30748784	0.104141	Sox2	ENSRNOT00000084391|Sgpl1|ENSRNOG00000000565|sphingosine-1-phosphate lyase 1 [Source:RGD Symbol%3BAcc:628599]
rn6_v1_chr2_-_232178533_232178671	0.104086	Sox2	ENSRNOT00000082173|Ap1ar|ENSRNOG00000024492|adaptor-related protein complex 1 associated regulatory protein [Source:RGD Symbol%3BAcc:1311435]	ENSRNOT00000055607|Ap1ar|ENSRNOG00000024492|adaptor-related protein complex 1 associated regulatory protein [Source:RGD Symbol%3BAcc:1311435]
rn6_v1_chr18_+_30381322_30381322	0.103826	Sox2	ENSRNOT00000027216|Pcdhb3|ENSRNOG00000020095|protocadherin beta 3 [Source:RGD Symbol%3BAcc:1305171]
rn6_v1_chr17_-_76250537_76250537	0.103428	Sox2	ENSRNOT00000092693|Upf2|ENSRNOG00000023593|UPF2 regulator of nonsense transcripts homolog (yeast) [Source:RGD Symbol%3BAcc:1309178]
rn6_v1_chrX_-_68562873_68562873	0.1033	Sox2	ENSRNOT00000076193|Ophn1|ENSRNOG00000026573|oligophrenin 1 [Source:RGD Symbol%3BAcc:1563435]
rn6_v1_chr7_-_12831675_12831675	0.103239	Sox2	ENSRNOT00000011936|Fgf22|ENSRNOG00000008960|fibroblast growth factor 22 [Source:RGD Symbol%3BAcc:620177]
rn6_v1_chr1_-_248376750_248376750	0.103193	Sox2	ENSRNOT00000089073|Gldc|ENSRNOG00000011599|glycine decarboxylase [Source:RGD Symbol%3BAcc:1308660]
rn6_v1_chr19_-_25345790_25345790	0.102366	Sox2	ENSRNOT00000010050|Zswim4|ENSRNOG00000007582|zinc finger%2C SWIM-type containing 4 [Source:RGD Symbol%3BAcc:1308020]
rn6_v1_chr8_+_59457018_59457018	0.102338	Sox2	ENSRNOT00000017900|Ireb2|ENSRNOG00000013271|iron responsive element binding protein 2 [Source:RGD Symbol%3BAcc:621539]
rn6_v1_chr6_+_24160226_24160226	0.102185	Sox2	ENSRNOT00000091904|Lbh|ENSRNOG00000039902|limb bud and heart development [Source:RGD Symbol%3BAcc:1584525]
rn6_v1_chr8_+_75625174_75625174	0.102133	Sox2	ENSRNOT00000013742|Ice2|ENSRNOG00000010160|interactor of little elongation complex ELL subunit 2 [Source:RGD Symbol%3BAcc:1585038]
rn6_v1_chr10_+_65552897_65552897	0.102015	Sox2	ENSRNOT00000056217|Spag5|ENSRNOG00000037214|sperm associated antigen 5 [Source:RGD Symbol%3BAcc:620152]
rn6_v1_chr1_-_126211439_126211439	0.101983	Sox2	ENSRNOT00000014988|Tjp1|ENSRNOG00000011077|tight junction protein 1 [Source:RGD Symbol%3BAcc:1306305]
rn6_v1_chr2_+_72006099_72006099	0.10195	Sox2	ENSRNOT00000034044|Cdh12|ENSRNOG00000026392|cadherin 12 [Source:RGD Symbol%3BAcc:1566350]
rn6_v1_chr10_-_4644570_4644570	0.101899	Sox2	ENSRNOT00000088279|Snn|ENSRNOG00000058739|stannin [Source:RGD Symbol%3BAcc:3730]
rn6_v1_chr14_-_16903242_16903242	0.101875	Sox2	ENSRNOT00000003001|Shroom3|ENSRNOG00000002208|shroom family member 3 [Source:RGD Symbol%3BAcc:1310470]
rn6_v1_chr18_+_30840868_30840868	0.101573	Sox2	ENSRNOT00000027026|Pcdhga5|ENSRNOG00000027299|protocadherin gamma subfamily A%2C 5 [Source:RGD Symbol%3BAcc:1311949]
rn6_v1_chr10_+_43768708_43768708	0.101174	Sox2	ENSRNOT00000086218|Sh3bp5l|ENSRNOG00000054400|SH3 binding domain protein 5 like [Source:RGD Symbol%3BAcc:1590939]
rn6_v1_chr1_+_213870502_213870502	0.101037	Sox2	ENSRNOT00000086483|B4galnt4|ENSRNOG00000053075|beta-1%2C4-N-acetyl-galactosaminyl transferase 4 [Source:RGD Symbol%3BAcc:1310052]
rn6_v1_chr6_+_127282466_127282466	0.101026	Sox2	ENSRNOT00000012124|Otub2|ENSRNOG00000009117|OTU deubiquitinase%2C ubiquitin aldehyde binding 2 [Source:RGD Symbol%3BAcc:1306688]
rn6_v1_chr8_-_116635851_116635851	0.100803	Sox2	ENSRNOT00000024939|Rbm6|ENSRNOG00000018333|RNA binding motif protein 6 [Source:RGD Symbol%3BAcc:1560367]
rn6_v1_chr6_-_136436818_136436818	0.100479	Sox2	ENSRNOT00000082600|Ppp1r13b|ENSRNOG00000012653|protein phosphatase 1%2C regulatory subunit 13B [Source:RGD Symbol%3BAcc:1304651]
rn6_v1_chr4_-_66955732_66955732	0.100335	Sox2	ENSRNOT00000084282|Kdm7a|ENSRNOG00000052445|lysine (K)-specific demethylase 7A [Source:MGI Symbol%3BAcc:MGI:2443388]
rn6_v1_chr3_-_37480984_37480984	0.100282	Sox2	ENSRNOT00000030373|Nmi|ENSRNOG00000027502|N-myc (and STAT) interactor [Source:RGD Symbol%3BAcc:1311721]
rn6_v1_chr2_-_211001258_211001258	0.100279	Sox2	ENSRNOT00000037336|Atxn7l2|ENSRNOG00000028749|ataxin 7-like 2 [Source:RGD Symbol%3BAcc:1307047]
rn6_v1_chr19_+_43882249_43882249	0.100059	Sox2	ENSRNOT00000025761|Zfp1|ENSRNOG00000019059|zinc finger protein 1 [Source:RGD Symbol%3BAcc:1565049]
rn6_v1_chr14_-_84106997_84106997	0.0997841	Sox2	ENSRNOT00000065501|Osbp2|ENSRNOG00000019645|oxysterol binding protein 2 [Source:RGD Symbol%3BAcc:1310505]
rn6_v1_chr7_+_12144162_12144162	0.0988594	Sox2	ENSRNOT00000077122|Tcf3|ENSRNOG00000051499|transcription factor 3 [Source:RGD Symbol%3BAcc:620914]
rn6_v1_chr14_+_34455934_34455934	0.0987412	Sox2	ENSRNOT00000085991|Clock|ENSRNOG00000002175|clock circadian regulator [Source:RGD Symbol%3BAcc:620271]	ENSRNOT00000002981|Clock|ENSRNOG00000002175|clock circadian regulator [Source:RGD Symbol%3BAcc:620271]
rn6_v1_chr7_-_120967490_120967490	0.0979987	Sox2	ENSRNOT00000046399|Sun2|ENSRNOG00000015177|Sad1 and UNC84 domain containing 2 [Source:RGD Symbol%3BAcc:1563141]
rn6_v1_chr8_+_119160731_119160731	0.0978773	Sox2	ENSRNOT00000046745|Als2cl|ENSRNOG00000033921|ALS2 C-terminal like [Source:RGD Symbol%3BAcc:1305208]
rn6_v1_chr8_-_21519013_21519013	0.0975509	Sox2	ENSRNOT00000042903|Zfp266|ENSRNOG00000034037|zinc finger protein 266 [Source:RGD Symbol%3BAcc:1308643]
rn6_v1_chr16_+_17611115_17611115	0.0971593	Sox2	ENSRNOT00000032309|Sh2d4b|ENSRNOG00000042623|SH2 domain containing 4B [Source:RGD Symbol%3BAcc:1311591]
rn6_v1_chr2_-_204341676_204341676	0.0971487	Sox2	ENSRNOT00000021713|Slc22a15|ENSRNOG00000033051|solute carrier family 22%2C member 15 [Source:RGD Symbol%3BAcc:1311184]
rn6_v1_chr1_-_48891130_48891130	0.095724	Sox2	ENSRNOT00000083884|AC135026.1|ENSRNOG00000054620|
rn6_v1_chr12_-_47793534_47793534	0.0954681	Sox2	ENSRNOT00000001588|Fam222a|ENSRNOG00000001198|family with sequence similarity 222%2C member A [Source:RGD Symbol%3BAcc:1565883]
rn6_v1_chr16_+_20521956_20521956	0.095157	Sox2	ENSRNOT00000026597|Pgpep1|ENSRNOG00000019639|pyroglutamyl-peptidase I [Source:RGD Symbol%3BAcc:1303133]
rn6_v1_chr7_+_2718700_2718700	0.094922	Sox2	ENSRNOT00000050792|Pan2|ENSRNOG00000032441|PAN2 poly(A) specific ribonuclease subunit [Source:RGD Symbol%3BAcc:1303301]
rn6_v1_chr5_-_65073012_65073012	0.0946381	Sox2	ENSRNOT00000007957|Grin3a|ENSRNOG00000005723|glutamate ionotropic receptor NMDA type subunit 3A [Source:RGD Symbol%3BAcc:621704]
rn6_v1_chr2_-_157058194_157058194	0.09449	Sox2	ENSRNOT00000076409|Rn50_2_1765.1|ENSRNOG00000051147|
rn6_v1_chr9_+_6970507_6970507	0.0944224	Sox2	ENSRNOT00000079488|St6gal2|ENSRNOG00000046515|ST6 beta-galactoside alpha-2%2C6-sialyltransferase 2 [Source:RGD Symbol%3BAcc:1559663]
rn6_v1_chr5_-_144479306_144479306	0.0941262	Sox2	ENSRNOT00000087697|Ago1|ENSRNOG00000055915|argonaute 1%2C RISC catalytic component [Source:RGD Symbol%3BAcc:1304619]
rn6_v1_chr19_-_1074333_1074365	0.0940605	Sox2	ENSRNOT00000017983|Cdh5|ENSRNOG00000013324|cadherin 5 [Source:RGD Symbol%3BAcc:1307370]	ENSRNOT00000086995|Cdh5|ENSRNOG00000013324|cadherin 5 [Source:RGD Symbol%3BAcc:1307370]
rn6_v1_chr8_+_76400341_76400373	0.0938215	Sox2	ENSRNOT00000087382|Bnip2|ENSRNOG00000056024|BCL2/adenovirus E1B interacting protein 2 [Source:RGD Symbol%3BAcc:1308944]	ENSRNOT00000081072|Bnip2|ENSRNOG00000056024|BCL2/adenovirus E1B interacting protein 2 [Source:RGD Symbol%3BAcc:1308944]
rn6_v1_chr3_-_133122691_133122691	0.0934875	Sox2	ENSRNOT00000083637|Tasp1|ENSRNOG00000004493|taspase 1 [Source:RGD Symbol%3BAcc:1308591]
rn6_v1_chr9_+_94324793_94324793	0.0934375	Sox2	ENSRNOT00000092493|Eif4e2|ENSRNOG00000019634|eukaryotic translation initiation factor 4E family member 2 [Source:RGD Symbol%3BAcc:1307790]
rn6_v1_chr10_+_38814799_38814799	0.0933446	Sox2	ENSRNOT00000074769|Shroom1|ENSRNOG00000007431|shroom family member 1 [Source:RGD Symbol%3BAcc:1308066]
rn6_v1_chr18_+_76559811_76559811	0.0929187	Sox2	ENSRNOT00000084621|Pard6g|ENSRNOG00000055157|par-6 family cell polarity regulator gamma [Source:RGD Symbol%3BAcc:1305016]
rn6_v1_chr8_+_52729003_52729003	0.0929148	Sox2	ENSRNOT00000081738|Nxpe4|ENSRNOG00000059851|neurexophilin and PC-esterase domain family%2C member 4 [Source:MGI Symbol%3BAcc:MGI:1924792]
rn6_v1_chr19_+_38598165_38598165	0.0923027	Sox2	ENSRNOT00000027209|Zfp90|ENSRNOG00000020087|zinc finger protein 90 [Source:RGD Symbol%3BAcc:1563077]
rn6_v1_chr8_+_19888667_19888667	0.092125	Sox2	ENSRNOT00000078593|Zfp317|ENSRNOG00000006684|zinc finger protein 317 [Source:RGD Symbol%3BAcc:1565419]
rn6_v1_chr1_+_214215992_214216047	0.0920777	Sox2	ENSRNOT00000051755|Phrf1|ENSRNOG00000017299|PHD and ring finger domains 1 [Source:RGD Symbol%3BAcc:708360]	ENSRNOT00000023376|Phrf1|ENSRNOG00000017299|PHD and ring finger domains 1 [Source:RGD Symbol%3BAcc:708360]
rn6_v1_chr2_-_186333805_186333805	0.0914759	Sox2	ENSRNOT00000022150|Cd1d1|ENSRNOG00000016451|CD1d1 molecule [Source:RGD Symbol%3BAcc:2296]
rn6_v1_chr1_+_226077120_226077120	0.0913622	Sox2	ENSRNOT00000027611|Rab3il1|ENSRNOG00000020349|RAB3A interacting protein-like 1 [Source:RGD Symbol%3BAcc:619764]
rn6_v1_chr18_-_37776453_37776453	0.0913529	Sox2	ENSRNOT00000087876|Dpysl3|ENSRNOG00000018992|dihydropyrimidinase-like 3 [Source:RGD Symbol%3BAcc:2410]
rn6_v1_chr2_+_226825635_226825635	0.0910332	Sox2	ENSRNOT00000042173|AABR07013200.1|ENSRNOG00000030491|
rn6_v1_chr18_+_30820321_30820321	0.0907166	Sox2	ENSRNOT00000060472|Pcdhga3|ENSRNOG00000039461|protocadherin gamma subfamily A%2C 3 [Source:RGD Symbol%3BAcc:1598664]
rn6_v1_chr19_-_52217728_52217728	0.0906551	Sox2	ENSRNOT00000020859|Hsdl1|ENSRNOG00000015576|hydroxysteroid dehydrogenase like 1 [Source:RGD Symbol%3BAcc:1308433]
rn6_v1_chr5_-_154222702_154222702	0.0906366	Sox2	ENSRNOT00000080069|Pnrc2|ENSRNOG00000009248|proline-rich nuclear receptor coactivator 2 [Source:RGD Symbol%3BAcc:1642418]
rn6_v1_chr5_+_130286393_130286393	0.0905057	Sox2	ENSRNOT00000044795|Ccp6l1|ENSRNOG00000033097|cytosolic carboxypeptidase 6-like 1 [Source:RGD Symbol%3BAcc:1564161]
rn6_v1_chr11_-_38351184_38351184	0.0905056	Sox2	ENSRNOT00000046318|Prdm15|ENSRNOG00000001620|PR/SET domain 15 [Source:RGD Symbol%3BAcc:1310055]
rn6_v1_chr7_-_3074359_3074359	0.0903427	Sox2	ENSRNOT00000019738|Ikzf4|ENSRNOG00000005535|IKAROS family zinc finger 4 [Source:RGD Symbol%3BAcc:2319157]
rn6_v1_chr13_+_96219853_96219853	0.0902296	Sox2	ENSRNOT00000006154|Cox20|ENSRNOG00000004553|COX20 cytochrome C oxidase assembly factor [Source:RGD Symbol%3BAcc:1309105]
rn6_v1_chr7_+_126939925_126939925	0.0902128	Sox2	ENSRNOT00000022746|Gramd4|ENSRNOG00000016968|GRAM domain containing 4 [Source:RGD Symbol%3BAcc:1309983]
rn6_v1_chr6_+_10912383_10912488	0.0891573	Sox2	ENSRNOT00000061747|Ttc7a|ENSRNOG00000014879|tetratricopeptide repeat domain 7A [Source:RGD Symbol%3BAcc:1306211]	ENSRNOT00000086247|Ttc7a|ENSRNOG00000014879|tetratricopeptide repeat domain 7A [Source:RGD Symbol%3BAcc:1306211]
rn6_v1_chr4_+_162151904_162151904	0.0885397	Sox2	ENSRNOT00000043078|LOC100910725|ENSRNOG00000030522|C-type lectin domain family 2 member D-related protein-like [Source:RGD Symbol%3BAcc:6497009]
rn6_v1_chr12_+_48577905_48577905	0.0884686	Sox2	ENSRNOT00000000888|Selplg|ENSRNOG00000000699|selectin P ligand [Source:RGD Symbol%3BAcc:1307971]
rn6_v1_chr7_-_140546908_140546908	0.0883459	Sox2	ENSRNOT00000077502|Kmt2d|ENSRNOG00000061499|lysine methyltransferase 2D [Source:RGD Symbol%3BAcc:2324324]
rn6_v1_chr20_-_45126062_45126062	0.0882408	Sox2	ENSRNOT00000000720|RGD1310495|ENSRNOG00000000589|similar to KIAA1919 protein [Source:RGD Symbol%3BAcc:1310495]
rn6_v1_chr3_-_170378210_170378210	0.0880973	Sox2	ENSRNOT00000055102|Aurka|ENSRNOG00000004479|aurora kinase A [Source:RGD Symbol%3BAcc:628895]
rn6_v1_chr5_+_64566804_64566804	0.0880673	Sox2	ENSRNOT00000073192|LOC103690035|ENSRNOG00000050760|TGF-beta receptor type-1-like [Source:RGD Symbol%3BAcc:9435399]
rn6_v1_chr1_-_193328371_193328371	0.0877721	Sox2	ENSRNOT00000019304|Arhgap17|ENSRNOG00000013836|Rho GTPase activating protein 17 [Source:RGD Symbol%3BAcc:628767]	ENSRNOT00000031770|Arhgap17|ENSRNOG00000013836|Rho GTPase activating protein 17 [Source:RGD Symbol%3BAcc:628767]	ENSRNOT00000019309|Arhgap17|ENSRNOG00000013836|Rho GTPase activating protein 17 [Source:RGD Symbol%3BAcc:628767]
rn6_v1_chr1_-_222495382_222495382	0.0876625	Sox2	ENSRNOT00000028759|Naa40|ENSRNOG00000021179|N(alpha)-acetyltransferase 40%2C NatD catalytic subunit [Source:RGD Symbol%3BAcc:1565838]
rn6_v1_chr8_+_62925357_62925376	0.0874826	Sox2	ENSRNOT00000011074|Stra6|ENSRNOG00000008312|stimulated by retinoic acid 6 [Source:RGD Symbol%3BAcc:1307551]	ENSRNOT00000090588|Stra6|ENSRNOG00000008312|stimulated by retinoic acid 6 [Source:RGD Symbol%3BAcc:1307551]
rn6_v1_chr7_-_140147984_140147984	0.0867584	Sox2	ENSRNOT00000081766|Kansl2|ENSRNOG00000053541|KAT8 regulatory NSL complex subunit 2 [Source:RGD Symbol%3BAcc:1303127]
rn6_v1_chr10_+_57660067_57660067	0.0866515	Sox2	ENSRNOT00000010144|Mis12|ENSRNOG00000007725|MIS12 kinetochore complex component [Source:RGD Symbol%3BAcc:1564837]
rn6_v1_chr8_-_13109487_13109487	0.0865492	Sox2	ENSRNOT00000061616|Amotl1|ENSRNOG00000008990|angiomotin-like 1 [Source:RGD Symbol%3BAcc:1305268]
rn6_v1_chr10_+_47930633_47930633	0.0865427	Sox2	ENSRNOT00000003515|Grap|ENSRNOG00000002599|GRB2-related adaptor protein [Source:RGD Symbol%3BAcc:1306884]
rn6_v1_chr15_+_18399733_18399733	0.0865256	Sox2	ENSRNOT00000061158|Fam107a|ENSRNOG00000033261|family with sequence similarity 107%2C member A [Source:RGD Symbol%3BAcc:1306327]
rn6_v1_chr15_-_93307420_93307420	0.0861952	Sox2	ENSRNOT00000012195|Slitrk1|ENSRNOG00000009209|SLIT and NTRK-like family%2C member 1 [Source:RGD Symbol%3BAcc:1308858]
rn6_v1_chr3_+_148722955_148722955	0.0861611	Sox2	ENSRNOT00000013730|Pofut1|ENSRNOG00000010104|protein O-fucosyltransferase 1 [Source:RGD Symbol%3BAcc:1303001]
rn6_v1_chr3_-_61494778_61494778	0.0860888	Sox2	ENSRNOT00000068018|Lnpk|ENSRNOG00000001593|lunapark%2C ER junction formation factor [Source:RGD Symbol%3BAcc:1312042]
rn6_v1_chrX_-_84768463_84768463	0.085895	Sox2	ENSRNOT00000088570|Chm|ENSRNOG00000000161|CHM%2C Rab escort protein 1 [Source:RGD Symbol%3BAcc:2340]
rn6_v1_chr1_-_199177365_199177365	0.0855701	Sox2	ENSRNOT00000041840|Ctf2|ENSRNOG00000030907|cardiotrophin 2 [Source:RGD Symbol%3BAcc:1308254]
rn6_v1_chr8_+_22577715_22577715	0.0852625	Sox2	ENSRNOT00000048245|Carm1|ENSRNOG00000031129|coactivator-associated arginine methyltransferase 1 [Source:RGD Symbol%3BAcc:1305879]	ENSRNOT00000041577|Carm1|ENSRNOG00000031129|coactivator-associated arginine methyltransferase 1 [Source:RGD Symbol%3BAcc:1305879]
rn6_v1_chr18_-_69657301_69657301	0.084966	Sox2	ENSRNOT00000090198|Smad4|ENSRNOG00000051965|SMAD family member 4 [Source:RGD Symbol%3BAcc:3033]
rn6_v1_chr5_+_49311030_49311030	0.0848442	Sox2	ENSRNOT00000010850|Cnr1|ENSRNOG00000008223|cannabinoid receptor 1 [Source:RGD Symbol%3BAcc:2369]
rn6_v1_chr7_-_12874215_12874215	0.0837661	Sox2	ENSRNOT00000011837|Hcn2|ENSRNOG00000008831|hyperpolarization activated cyclic nucleotide-gated potassium channel 2 [Source:RGD Symbol%3BAcc:620689]
rn6_v1_chr6_-_72596446_72596446	0.0832697	Sox2	ENSRNOT00000008459|Hectd1|ENSRNOG00000006905|HECT domain E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1561653]
rn6_v1_chr3_+_176882027_176882027	0.0825874	Sox2	ENSRNOT00000019545|Lime1|ENSRNOG00000049336|Lck interacting transmembrane adaptor 1 [Source:RGD Symbol%3BAcc:1562795]
rn6_v1_chr3_-_3541947_3541947	0.0822661	Sox2	ENSRNOT00000024786|Nacc2|ENSRNOG00000018231|NACC family member 2 [Source:RGD Symbol%3BAcc:1309292]
rn6_v1_chr2_-_226779266_226779266	0.0820472	Sox2	ENSRNOT00000019244|Fnbp1l|ENSRNOG00000013798|formin binding protein 1-like [Source:RGD Symbol%3BAcc:1305386]
rn6_v1_chrX_-_75224268_75224268	0.0819019	Sox2	ENSRNOT00000089809|Abcb7|ENSRNOG00000002790|ATP binding cassette subfamily B member 7 [Source:RGD Symbol%3BAcc:1303086]
rn6_v1_chr10_-_14788617_14788617	0.081599	Sox2	ENSRNOT00000043626|Cacna1h|ENSRNOG00000033893|calcium voltage-gated channel subunit alpha1 H [Source:RGD Symbol%3BAcc:68943]
rn6_v1_chr1_+_64928503_64928503	0.0812086	Sox2	ENSRNOT00000086274|Vom2r80|ENSRNOG00000055298|vomeronasal 2 receptor%2C 80 [Source:RGD Symbol%3BAcc:1559687]
rn6_v1_chr7_-_140213045_140213050	0.080524	Sox2	ENSRNOT00000086886|LOC103690317|ENSRNOG00000060185|KAT8 regulatory NSL complex subunit 2 [Source:RGD Symbol%3BAcc:9332946]	ENSRNOT00000090730|LOC103690317|ENSRNOG00000060185|KAT8 regulatory NSL complex subunit 2 [Source:RGD Symbol%3BAcc:9332946]
rn6_v1_chr13_-_113817995_113817995	0.0802811	Sox2	ENSRNOT00000057151|Cd46|ENSRNOG00000007917|CD46 molecule [Source:RGD Symbol%3BAcc:3061]
rn6_v1_chr14_-_46529375_46529375	0.0793153	Sox2	ENSRNOT00000077306|LOC257642|ENSRNOG00000060518|rRNA promoter binding protein [Source:RGD Symbol%3BAcc:727924]	ENSRNOT00000078682|LOC257642|ENSRNOG00000060518|rRNA promoter binding protein [Source:RGD Symbol%3BAcc:727924]
rn6_v1_chr4_+_152437966_152437966	0.0792069	Sox2	ENSRNOT00000013070|Rad52|ENSRNOG00000009742|RAD52 homolog%2C DNA repair protein [Source:RGD Symbol%3BAcc:1304975]
rn6_v1_chr1_+_201256910_201256910	0.0788663	Sox2	ENSRNOT00000090143|Tacc2|ENSRNOG00000020457|transforming%2C acidic coiled-coil containing protein 2 [Source:RGD Symbol%3BAcc:1303004]
rn6_v1_chr19_-_24487396_24487396	0.0788473	Sox2	ENSRNOT00000031614|Elmod2|ENSRNOG00000028176|ELMO domain containing 2 [Source:RGD Symbol%3BAcc:1587598]
rn6_v1_chr10_+_46940965_46940965	0.0785338	Sox2	ENSRNOT00000005366|Llgl1|ENSRNOG00000003948|LLGL1%2C scribble cell polarity complex component [Source:RGD Symbol%3BAcc:3012]
rn6_v1_chr18_-_27424090_27424090	0.0783286	Sox2	ENSRNOT00000087968|Brd8|ENSRNOG00000020340|bromodomain containing 8 [Source:RGD Symbol%3BAcc:1307003]
rn6_v1_chr8_+_49737798_49737798	0.0782898	Sox2	ENSRNOT00000022476|Dscaml1|ENSRNOG00000016502|DS cell adhesion molecule-like 1 [Source:RGD Symbol%3BAcc:1304887]
rn6_v1_chr14_+_13192347_13192347	0.078101	Sox2	ENSRNOT00000000092|Antxr2|ENSRNOG00000000081|anthrax toxin receptor 2 [Source:RGD Symbol%3BAcc:1561294]
rn6_v1_chr6_+_145546595_145546595	0.0780649	Sox2	ENSRNOT00000007112|Rapgef5|ENSRNOG00000005271|Rap guanine nucleotide exchange factor 5 [Source:RGD Symbol%3BAcc:1561668]
rn6_v1_chr15_-_51890832_51890832	0.0780412	Sox2	ENSRNOT00000012056|Sorbs3|ENSRNOG00000008829|sorbin and SH3 domain containing 3 [Source:RGD Symbol%3BAcc:628900]
rn6_v1_chr1_+_264741911_264741911	0.0779694	Sox2	ENSRNOT00000019956|Sema4g|ENSRNOG00000014650|semaphorin 4G [Source:RGD Symbol%3BAcc:1310436]
rn6_v1_chrX_-_138148967_138148967	0.0775911	Sox2	ENSRNOT00000033968|Frmd7|ENSRNOG00000024762|FERM domain containing 7 [Source:RGD Symbol%3BAcc:1562057]
rn6_v1_chr10_-_65766050_65766050	0.0774435	Sox2	ENSRNOT00000013639|Sarm1|ENSRNOG00000010244|sterile alpha and TIR motif containing 1 [Source:RGD Symbol%3BAcc:1310078]
rn6_v1_chr15_-_33333417_33333417	0.077278	Sox2	ENSRNOT00000018982|Acin1|ENSRNOG00000013533|apoptotic chromatin condensation inducer 1 [Source:RGD Symbol%3BAcc:1311945]
rn6_v1_chr4_+_65637407_65637407	0.0772777	Sox2	ENSRNOT00000047954|Trim24|ENSRNOG00000013251|tripartite motif-containing 24 [Source:RGD Symbol%3BAcc:1560596]
rn6_v1_chr16_+_86631064_86631064	0.0770099	Sox2	ENSRNOT00000019675|Efnb2|ENSRNOG00000014648|ephrin B2 [Source:RGD Symbol%3BAcc:1309497]
rn6_v1_chr6_+_27768943_27768943	0.0764584	Sox2	ENSRNOT00000015820|Kif3c|ENSRNOG00000011394|kinesin family member 3C [Source:RGD Symbol%3BAcc:621538]
rn6_v1_chr2_-_187742747_187742747	0.0764261	Sox2	ENSRNOT00000026530|Bglap|ENSRNOG00000019607|bone gamma-carboxyglutamate protein [Source:RGD Symbol%3BAcc:2206]
rn6_v1_chr1_-_143256817_143256817	0.0763637	Sox2	ENSRNOT00000078789|Cpeb1|ENSRNOG00000019161|cytoplasmic polyadenylation element binding protein 1 [Source:RGD Symbol%3BAcc:1310421]
rn6_v1_chr6_-_92007917_92007957	0.0757932	Sox2	ENSRNOT00000006425|Sos2|ENSRNOG00000004826|SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:RGD Symbol%3BAcc:620435]	ENSRNOT00000089891|Sos2|ENSRNOG00000004826|SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:RGD Symbol%3BAcc:620435]
rn6_v1_chr5_+_107323258_107323258	0.0754191	Sox2	ENSRNOT00000008510|Klhl9|ENSRNOG00000006335|kelch-like family member 9 [Source:RGD Symbol%3BAcc:1304814]
rn6_v1_chr13_-_89661150_89661150	0.0753932	Sox2	ENSRNOT00000058390|Usp21|ENSRNOG00000038347|ubiquitin specific peptidase 21 [Source:RGD Symbol%3BAcc:1588822]
rn6_v1_chr7_-_12246729_12246729	0.075028	Sox2	ENSRNOT00000044030|Reep6|ENSRNOG00000033262|receptor accessory protein 6 [Source:RGD Symbol%3BAcc:1309508]
rn6_v1_chr4_+_175814118_175814118	0.0749871	Sox2	ENSRNOT00000013409|Slco1b2|ENSRNOG00000030538|solute carrier organic anion transporter family%2C member 1B2 [Source:RGD Symbol%3BAcc:69300]	ENSRNOT00000013514|Slco1b2|ENSRNOG00000030538|solute carrier organic anion transporter family%2C member 1B2 [Source:RGD Symbol%3BAcc:69300]
rn6_v1_chr1_+_99486253_99486253	0.0748208	Sox2	ENSRNOT00000074820|LOC102546648|ENSRNOG00000023233|uncharacterized LOC102546648 [Source:RGD Symbol%3BAcc:7541917]
rn6_v1_chr2_-_199354793_199354793	0.0747261	Sox2	ENSRNOT00000023548|Bcl9|ENSRNOG00000017516|B-cell CLL/lymphoma 9 [Source:RGD Symbol%3BAcc:1306934]
rn6_v1_chr5_-_57008795_57008859	0.0745887	Sox2	ENSRNOT00000090891|Aptx|ENSRNOG00000006582|aprataxin [Source:RGD Symbol%3BAcc:628740]	ENSRNOT00000046463|Aptx|ENSRNOG00000006582|aprataxin [Source:RGD Symbol%3BAcc:628740]
rn6_v1_chr2_-_186245163_186245163	0.0742134	Sox2	ENSRNOT00000089339|Dclk2|ENSRNOG00000016550|doublecortin-like kinase 2 [Source:RGD Symbol%3BAcc:1308384]
rn6_v1_chr10_-_32471454_32471454	0.0739759	Sox2	ENSRNOT00000003224|Sgcd|ENSRNOG00000002372|sarcoglycan%2C delta [Source:RGD Symbol%3BAcc:1306638]
rn6_v1_chr8_-_87158368_87158368	0.0737327	Sox2	ENSRNOT00000077071|Col12a1|ENSRNOG00000058470|collagen type XII alpha 1 chain [Source:RGD Symbol%3BAcc:2374]
rn6_v1_chr11_-_1836897_1836897	0.0735528	Sox2	ENSRNOT00000050533|Zfp654|ENSRNOG00000029956|zinc finger protein 654 [Source:RGD Symbol%3BAcc:1308321]
rn6_v1_chr7_+_64672722_64672722	0.073458	Sox2	ENSRNOT00000064448|Grip1|ENSRNOG00000004013|glutamate receptor interacting protein 1 [Source:RGD Symbol%3BAcc:621667]	ENSRNOT00000005539|Grip1|ENSRNOG00000004013|glutamate receptor interacting protein 1 [Source:RGD Symbol%3BAcc:621667]
rn6_v1_chr20_-_2212171_2212171	0.0733763	Sox2	ENSRNOT00000085912|Trim26|ENSRNOG00000032930|tripartite motif-containing 26 [Source:RGD Symbol%3BAcc:1359126]
rn6_v1_chr17_-_1093873_1093873	0.0733406	Sox2	ENSRNOT00000086130|Ptch1|ENSRNOG00000019354|patched 1 [Source:RGD Symbol%3BAcc:621425]
rn6_v1_chr1_-_146556171_146556171	0.0730976	Sox2	ENSRNOT00000017636|Arnt2|ENSRNOG00000013017|aryl hydrocarbon receptor nuclear translocator 2 [Source:RGD Symbol%3BAcc:2154]
rn6_v1_chr13_-_76049363_76049363	0.0730901	Sox2	ENSRNOT00000075865|Brinp2|ENSRNOG00000005592|BMP/retinoic acid inducible neural specific 2 [Source:RGD Symbol%3BAcc:708419]	ENSRNOT00000007455|Brinp2|ENSRNOG00000005592|BMP/retinoic acid inducible neural specific 2 [Source:RGD Symbol%3BAcc:708419]
rn6_v1_chr6_-_51019407_51019407	0.0729394	Sox2	ENSRNOT00000011659|Gpr22|ENSRNOG00000008423|G protein-coupled receptor 22 [Source:RGD Symbol%3BAcc:1310848]
rn6_v1_chr11_-_31213787_31213787	0.0728718	Sox2	ENSRNOT00000002800|Paxbp1|ENSRNOG00000002036|PAX3 and PAX7 binding protein 1 [Source:RGD Symbol%3BAcc:1584739]
rn6_v1_chr17_-_54678710_54678710	0.0727359	Sox2	ENSRNOT00000046013|Zeb1|ENSRNOG00000017863|zinc finger E-box binding homeobox 1 [Source:RGD Symbol%3BAcc:3831]
rn6_v1_chr1_+_81779380_81779482	0.0726216	Sox2	ENSRNOT00000065865|Arhgef1|ENSRNOG00000020130|Rho guanine nucleotide exchange factor 1 [Source:RGD Symbol%3BAcc:620951]	ENSRNOT00000080143|Arhgef1|ENSRNOG00000020130|Rho guanine nucleotide exchange factor 1 [Source:RGD Symbol%3BAcc:620951]	ENSRNOT00000089592|Arhgef1|ENSRNOG00000020130|Rho guanine nucleotide exchange factor 1 [Source:RGD Symbol%3BAcc:620951]	ENSRNOT00000080840|Arhgef1|ENSRNOG00000020130|Rho guanine nucleotide exchange factor 1 [Source:RGD Symbol%3BAcc:620951]
rn6_v1_chr13_-_72063347_72063488	0.0726153	Sox2	ENSRNOT00000090544|Cacna1e|ENSRNOG00000002863|calcium voltage-gated channel subunit alpha1 E [Source:RGD Symbol%3BAcc:2246]	ENSRNOT00000003869|Cacna1e|ENSRNOG00000002863|calcium voltage-gated channel subunit alpha1 E [Source:RGD Symbol%3BAcc:2246]
rn6_v1_chr7_-_24667301_24667301	0.0720683	Sox2	ENSRNOT00000009154|Tmem263|ENSRNOG00000006987|transmembrane protein 263 [Source:RGD Symbol%3BAcc:1563325]
rn6_v1_chr1_+_259926537_259926537	0.0719115	Sox2	ENSRNOT00000073537|NEWGENE_1306399|ENSRNOG00000048973|cyclin J [Source:RGD Symbol%3BAcc:11506373]
rn6_v1_chr1_-_112436794_112436794	0.0716189	Sox2	ENSRNOT00000019971|Gabrg3|ENSRNOG00000014862|gamma-aminobutyric acid type A receptor gamma 3 subunit [Source:RGD Symbol%3BAcc:621735]
rn6_v1_chr3_-_5975734_5975734	0.0715633	Sox2	ENSRNOT00000081376|Vav2|ENSRNOG00000007422|vav guanine nucleotide exchange factor 2 [Source:RGD Symbol%3BAcc:1306285]
rn6_v1_chr3_-_23474170_23474170	0.0713658	Sox2	ENSRNOT00000039410|Scai|ENSRNOG00000025278|suppressor of cancer cell invasion [Source:RGD Symbol%3BAcc:1594720]
rn6_v1_chr1_-_214067657_214067657	0.0705993	Sox2	ENSRNOT00000044390|LOC100911881|ENSRNOG00000019351|chitinase domain-containing protein 1-like [Source:RGD Symbol%3BAcc:6490147]
rn6_v1_chr2_+_80131563_80131563	0.0704587	Sox2	ENSRNOT00000068484|Ankh|ENSRNOG00000010960|ANKH inorganic pyrophosphate transport regulator [Source:RGD Symbol%3BAcc:619925]
rn6_v1_chr3_+_150910398_150910398	0.0703953	Sox2	ENSRNOT00000055310|Tp53inp2|ENSRNOG00000018225|tumor protein p53 inducible nuclear protein 2 [Source:RGD Symbol%3BAcc:735085]
rn6_v1_chr8_+_70884491_70884491	0.0703715	Sox2	ENSRNOT00000072939|Ubap1l|ENSRNOG00000050979|ubiquitin associated protein 1-like [Source:RGD Symbol%3BAcc:1582742]
rn6_v1_chr10_+_34938667_34938691	0.0703705	Sox2	ENSRNOT00000086443|LOC103690164|ENSRNOG00000048357|5-phosphohydroxy-L-lysine phospho-lyase [Source:RGD Symbol%3BAcc:9104895]	ENSRNOT00000059104|LOC103690164|ENSRNOG00000048357|5-phosphohydroxy-L-lysine phospho-lyase [Source:RGD Symbol%3BAcc:9104895]
rn6_v1_chr2_+_196013799_196013799	0.0703331	Sox2	ENSRNOT00000084023|Pogz|ENSRNOG00000053599|pogo transposable element with ZNF domain [Source:RGD Symbol%3BAcc:1309980]
rn6_v1_chr3_-_51643140_51643140	0.0698122	Sox2	ENSRNOT00000006646|Scn3a|ENSRNOG00000005007|sodium voltage-gated channel alpha subunit 3 [Source:RGD Symbol%3BAcc:3635]
rn6_v1_chr4_+_44774741_44774741	0.0697894	Sox2	ENSRNOT00000086902|Met|ENSRNOG00000052745|MET proto-oncogene%2C receptor tyrosine kinase [Source:RGD Symbol%3BAcc:3082]
rn6_v1_chr3_-_36660758_36660758	0.0697796	Sox2	ENSRNOT00000006111|Rnd3|ENSRNOG00000004624|Rho family GTPase 3 [Source:RGD Symbol%3BAcc:1359690]
rn6_v1_chr2_+_220298245_220298245	0.0696632	Sox2	ENSRNOT00000022625|Plppr4|ENSRNOG00000016872|phospholipid phosphatase related 4 [Source:RGD Symbol%3BAcc:727806]
rn6_v1_chrY_+_327166_327166	0.0694861	Sox2	ENSRNOT00000092902|Sry|ENSRNOG00000062090|sex determining region Y [Source:RGD Symbol%3BAcc:3759]
rn6_v1_chr13_-_80775230_80775264	0.0693196	Sox2	ENSRNOT00000091389|Fmo2|ENSRNOG00000003510|flavin containing monooxygenase 2 [Source:RGD Symbol%3BAcc:628600]	ENSRNOT00000004762|Fmo2|ENSRNOG00000003510|flavin containing monooxygenase 2 [Source:RGD Symbol%3BAcc:628600]
rn6_v1_chr18_+_79773608_79773608	0.0691396	Sox2	ENSRNOT00000088484|Zfp516|ENSRNOG00000016258|zinc finger protein 516 [Source:RGD Symbol%3BAcc:1306817]
rn6_v1_chr10_+_4538111_4538111	0.0689827	Sox2	ENSRNOT00000084151|Zc3h7a|ENSRNOG00000002420|zinc finger CCCH type containing 7 A [Source:RGD Symbol%3BAcc:1311225]
rn6_v1_chr4_-_157894448_157894448	0.0687082	Sox2	ENSRNOT00000026441|Plekhg6|ENSRNOG00000019528|pleckstrin homology and RhoGEF domain containing G6 [Source:RGD Symbol%3BAcc:2318544]
rn6_v1_chr15_-_33752665_33752665	0.0685482	Sox2	ENSRNOT00000034102|Zfhx2|ENSRNOG00000025634|zinc finger homeobox 2 [Source:RGD Symbol%3BAcc:735143]
rn6_v1_chr13_+_34498749_34498749	0.0683357	Sox2	ENSRNOT00000093127|Clasp1|ENSRNOG00000002376|cytoplasmic linker associated protein 1 [Source:RGD Symbol%3BAcc:1310970]
rn6_v1_chr1_-_174289647_174289647	0.0683291	Sox2	ENSRNOT00000064902|St5|ENSRNOG00000013934|suppression of tumorigenicity 5 [Source:RGD Symbol%3BAcc:1308995]
rn6_v1_chr4_-_176922424_176922424	0.0683119	Sox2	ENSRNOT00000055540|Abcc9|ENSRNOG00000036960|ATP binding cassette subfamily C member 9 [Source:RGD Symbol%3BAcc:3787]
rn6_v1_chr5_-_169499268_169499268	0.0682202	Sox2	ENSRNOT00000046552|Rnf207|ENSRNOG00000033722|ring finger protein 207 [Source:RGD Symbol%3BAcc:1586262]
rn6_v1_chr6_+_8219385_8219385	0.0680821	Sox2	ENSRNOT00000040509|Ppm1b|ENSRNOG00000030667|protein phosphatase%2C Mg2+/Mn2+ dependent%2C 1B [Source:RGD Symbol%3BAcc:3374]
rn6_v1_chr17_+_15924048_15924048	0.0680543	Sox2	ENSRNOT00000050696|Wnk2|ENSRNOG00000016684|WNK lysine deficient protein kinase 2 [Source:RGD Symbol%3BAcc:1307284]
rn6_v1_chr13_-_95250235_95250235	0.0678398	Sox2	ENSRNOT00000085648|Akt3|ENSRNOG00000021497|AKT serine/threonine kinase 3 [Source:RGD Symbol%3BAcc:62390]
rn6_v1_chr16_-_71203609_71203609	0.0677734	Sox2	ENSRNOT00000088458|Nsd3|ENSRNOG00000015621|nuclear receptor binding SET domain protein 3 [Source:RGD Symbol%3BAcc:1308980]
rn6_v1_chr16_+_6806170_6806170	0.0677558	Sox2	ENSRNOT00000084713|Sfmbt1|ENSRNOG00000016645|Scm-like with four mbt domains 1 [Source:RGD Symbol%3BAcc:61999]
rn6_v1_chr15_-_6587367_6587367	0.0676065	Sox2	ENSRNOT00000038449|Zfp385d|ENSRNOG00000014661|zinc finger protein 385D [Source:RGD Symbol%3BAcc:1359606]
rn6_v1_chr20_-_5927070_5927070	0.0675815	Sox2	ENSRNOT00000059264|Slc26a8|ENSRNOG00000000512|solute carrier family 26 member 8 [Source:RGD Symbol%3BAcc:1308898]
rn6_v1_chr6_-_147172813_147172813	0.0674396	Sox2	ENSRNOT00000066545|Itgb8|ENSRNOG00000006569|integrin subunit beta 8 [Source:RGD Symbol%3BAcc:1311374]
rn6_v1_chr10_-_85574889_85574889	0.0672084	Sox2	ENSRNOT00000072274|LOC691153|ENSRNOG00000048187|hypothetical protein LOC691153 [Source:RGD Symbol%3BAcc:1587434]
rn6_v1_chr7_-_83670356_83670356	0.0671728	Sox2	ENSRNOT00000005584|Sybu|ENSRNOG00000004200|syntabulin [Source:RGD Symbol%3BAcc:1564335]
rn6_v1_chr10_+_67762995_67762995	0.0668408	Sox2	ENSRNOT00000000253|Zfp207|ENSRNOG00000000236|zinc finger protein 207 [Source:RGD Symbol%3BAcc:1308121]
rn6_v1_chr7_+_73273985_73273985	0.066514	Sox2	ENSRNOT00000077730|Pop1|ENSRNOG00000005243|POP1 homolog%2C ribonuclease P/MRP subunit [Source:RGD Symbol%3BAcc:1308609]
rn6_v1_chr9_+_53120656_53120656	0.0664428	Sox2	ENSRNOT00000043714|Pms1|ENSRNOG00000004076|PMS1 homolog 1%2C mismatch repair system component [Source:RGD Symbol%3BAcc:1359511]
rn6_v1_chr3_+_153580861_153580869	0.066372	Sox2	ENSRNOT00000080516|Src|ENSRNOG00000009495|SRC proto-oncogene%2C non-receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620795]	ENSRNOT00000012739|Src|ENSRNOG00000009495|SRC proto-oncogene%2C non-receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620795]
rn6_v1_chr20_-_38985036_38985036	0.0662603	Sox2	ENSRNOT00000001066|Serinc1|ENSRNOG00000029360|serine incorporator 1 [Source:RGD Symbol%3BAcc:727843]
rn6_v1_chr18_+_70192493_70192493	0.0660649	Sox2	ENSRNOT00000020472|Cxxc1|ENSRNOG00000014614|CXXC finger protein 1 [Source:RGD Symbol%3BAcc:1310755]
rn6_v1_chr1_-_98046770_98046770	0.0659489	Sox2	ENSRNOT00000056528|Grb2|ENSRNOG00000037360|growth factor receptor bound protein 2 [Source:RGD Symbol%3BAcc:619758]
rn6_v1_chr18_-_40123420_40123420	0.0658225	Sox2	ENSRNOT00000080812|Trim36|ENSRNOG00000016612|tripartite motif-containing 36 [Source:RGD Symbol%3BAcc:1308714]
rn6_v1_chr1_-_199064150_199064150	0.0656066	Sox2	ENSRNOT00000044511|Zfp689|ENSRNOG00000018877|zinc finger protein 689 [Source:RGD Symbol%3BAcc:628696]
rn6_v1_chr1_-_191676915_191676915	0.0653523	Sox2	ENSRNOT00000082927|Usp31|ENSRNOG00000025793|ubiquitin specific peptidase 31 [Source:RGD Symbol%3BAcc:1308183]
rn6_v1_chr2_+_95008477_95008477	0.0651894	Sox2	ENSRNOT00000015327|Tpd52|ENSRNOG00000011441|tumor protein D52 [Source:RGD Symbol%3BAcc:1306767]
rn6_v1_chr2_-_52282548_52282548	0.0651251	Sox2	ENSRNOT00000033627|Nnt|ENSRNOG00000026842|nicotinamide nucleotide transhydrogenase [Source:RGD Symbol%3BAcc:1587346]
rn6_v1_chr8_+_111210811_111210811	0.065043	Sox2	ENSRNOT00000011347|Amotl2|ENSRNOG00000008487|angiomotin like 2 [Source:RGD Symbol%3BAcc:70977]
rn6_v1_chr2_-_34185682_34185812	0.064869	Sox2	ENSRNOT00000066925|Nln|ENSRNOG00000011561|neurolysin [Source:RGD Symbol%3BAcc:621518]	ENSRNOT00000082755|Nln|ENSRNOG00000011561|neurolysin [Source:RGD Symbol%3BAcc:621518]
rn6_v1_chr5_+_63870432_63870432	0.0647853	Sox2	ENSRNOT00000007641|Stx17|ENSRNOG00000005801|syntaxin 17 [Source:RGD Symbol%3BAcc:708499]
rn6_v1_chrX_+_43535737_43535737	0.064703	Sox2	ENSRNOT00000087073|LOC102557137|ENSRNOG00000059697|E3 ubiquitin-protein ligase RNF168-like [Source:RGD Symbol%3BAcc:7505527]
rn6_v1_chr5_+_58937615_58937615	0.0646611	Sox2	ENSRNOT00000080909|Tesk1|ENSRNOG00000053729|testis-specific kinase 1 [Source:RGD Symbol%3BAcc:62059]
rn6_v1_chr16_-_61091169_61091169	0.0645413	Sox2	ENSRNOT00000016328|Dusp4|ENSRNOG00000011921|dual specificity phosphatase 4 [Source:RGD Symbol%3BAcc:620625]
rn6_v1_chr1_-_2627747_2627747	0.0642739	Sox2	ENSRNOT00000022003|Ust|ENSRNOG00000016381|uronyl-2-sulfotransferase [Source:RGD Symbol%3BAcc:1304743]
rn6_v1_chr4_+_175729726_175729726	0.064236	Sox2	ENSRNOT00000013230|Slco1c1|ENSRNOG00000009740|solute carrier organic anion transporter family%2C member 1c1 [Source:RGD Symbol%3BAcc:628660]
rn6_v1_chr2_+_86996798_86996798	0.0637981	Sox2	ENSRNOT00000070821|Zfp455|ENSRNOG00000031576|zinc finger protein 455 [Source:RGD Symbol%3BAcc:628788]
rn6_v1_chr12_+_37984790_37984790	0.0636045	Sox2	ENSRNOT00000001445|Vps37b|ENSRNOG00000001086|VPS37B%2C ESCRT-I subunit [Source:RGD Symbol%3BAcc:1304576]
rn6_v1_chr1_-_71399751_71399751	0.0633612	Sox2	ENSRNOT00000020787|Zfp444|ENSRNOG00000015517|zinc finger protein 444 [Source:RGD Symbol%3BAcc:1304847]
rn6_v1_chr9_-_85528860_85528869	0.063131	Sox2	ENSRNOT00000063834|Wdfy1|ENSRNOG00000015080|WD repeat and FYVE domain containing 1 [Source:RGD Symbol%3BAcc:1305996]	ENSRNOT00000088963|Wdfy1|ENSRNOG00000015080|WD repeat and FYVE domain containing 1 [Source:RGD Symbol%3BAcc:1305996]
rn6_v1_chr10_-_35800120_35800120	0.063047	Sox2	ENSRNOT00000004361|Maml1|ENSRNOG00000003268|mastermind-like transcriptional coactivator 1 [Source:RGD Symbol%3BAcc:1308631]
rn6_v1_chrX_+_10042893_10042893	0.0627546	Sox2	ENSRNOT00000084218|LOC100910506|ENSRNOG00000060946|peripheral plasma membrane protein CASK-like [Source:RGD Symbol%3BAcc:6498449]
rn6_v1_chr9_-_17866927_17866927	0.0623234	Sox2	ENSRNOT00000027031|Tcte1|ENSRNOG00000019961|t-complex-associated testis expressed 1 [Source:RGD Symbol%3BAcc:1305744]
rn6_v1_chrX_-_157331204_157331204	0.0622284	Sox2	ENSRNOT00000085201|Bgn|ENSRNOG00000055962|biglycan [Source:RGD Symbol%3BAcc:2207]
rn6_v1_chr2_-_18531210_18531210	0.0621234	Sox2	ENSRNOT00000088313|Vcan|ENSRNOG00000029212|versican [Source:RGD Symbol%3BAcc:619940]
rn6_v1_chr18_-_35817117_35817127	0.0618755	Sox2	ENSRNOT00000015172|Mcc|ENSRNOG00000011271|mutated in colorectal cancers [Source:RGD Symbol%3BAcc:1561988]	ENSRNOT00000085714|Mcc|ENSRNOG00000011271|mutated in colorectal cancers [Source:RGD Symbol%3BAcc:1561988]
rn6_v1_chr16_+_22250470_22250470	0.0618227	Sox2	ENSRNOT00000015799|Lzts1|ENSRNOG00000011826|leucine zipper tumor suppressor 1 [Source:RGD Symbol%3BAcc:708565]
rn6_v1_chr1_-_56942556_56942556	0.0616695	Sox2	ENSRNOT00000021141|Wdr27|ENSRNOG00000015609|WD repeat domain 27 [Source:RGD Symbol%3BAcc:1309633]
rn6_v1_chr14_-_35149608_35149610	0.0615482	Sox2	ENSRNOT00000003050|Kit|ENSRNOG00000002227|KIT proto-oncogene receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620568]	ENSRNOT00000090654|Kit|ENSRNOG00000002227|KIT proto-oncogene receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620568]
rn6_v1_chr1_+_80426918_80426918	0.0614956	Sox2	ENSRNOT00000067272|Nkpd1|ENSRNOG00000043378|NTPase%2C KAP family P-loop domain containing 1 [Source:RGD Symbol%3BAcc:1591760]
rn6_v1_chr4_-_8239289_8239289	0.0614661	Sox2	ENSRNOT00000068276|Kmt2e|ENSRNOG00000021614|lysine methyltransferase 2E [Source:RGD Symbol%3BAcc:1309641]
rn6_v1_chr3_+_71437241_71437241	0.0609998	Sox2	ENSRNOT00000046112|LOC499823|ENSRNOG00000029652|LRRG00114 [Source:RGD Symbol%3BAcc:1565658]
rn6_v1_chr7_+_141326950_141326950	0.0609668	Sox2	ENSRNOT00000084075|Asic1|ENSRNOG00000059765|acid sensing ion channel subunit 1 [Source:RGD Symbol%3BAcc:71062]
rn6_v1_chr20_-_32501722_32501722	0.060886	Sox2	ENSRNOT00000000448|Zufsp|ENSRNOG00000000398|zinc finger with UFM1-specific peptidase domain [Source:RGD Symbol%3BAcc:1307672]
rn6_v1_chr2_+_192538899_192538899	0.0608623	Sox2	ENSRNOT00000045691|LOC102550416|ENSRNOG00000042517|small proline-rich protein 2I-like [Source:RGD Symbol%3BAcc:7654558]	ENSRNOT00000085931|LOC102550416|ENSRNOG00000042517|small proline-rich protein 2I-like [Source:RGD Symbol%3BAcc:7654558]
rn6_v1_chr9_-_61634510_61634510	0.060842	Sox2	ENSRNOT00000019126|Sf3b1|ENSRNOG00000013516|splicing factor 3b%2C subunit 1 [Source:RGD Symbol%3BAcc:620148]
rn6_v1_chr14_-_35652709_35652709	0.0606309	Sox2	ENSRNOT00000003080|Gsx2|ENSRNOG00000002266|GS homeobox 2 [Source:RGD Symbol%3BAcc:1308047]
rn6_v1_chr8_-_71728654_71728685	0.060549	Sox2	ENSRNOT00000031207|Snx22|ENSRNOG00000022852|sorting nexin 22 [Source:RGD Symbol%3BAcc:1305042]	ENSRNOT00000091751|Snx22|ENSRNOG00000022852|sorting nexin 22 [Source:RGD Symbol%3BAcc:1305042]
rn6_v1_chr14_+_81819415_81819469	0.0603116	Sox2	ENSRNOT00000018515|Mxd4|ENSRNOG00000015033|Max dimerization protein 4 [Source:RGD Symbol%3BAcc:1305093]	ENSRNOT00000075863|Mxd4|ENSRNOG00000015033|Max dimerization protein 4 [Source:RGD Symbol%3BAcc:1305093]	ENSRNOT00000077060|Mxd4|ENSRNOG00000015033|Max dimerization protein 4 [Source:RGD Symbol%3BAcc:1305093]
rn6_v1_chr4_+_181055662_181055662	0.0601469	Sox2	ENSRNOT00000086813|Stk38l|ENSRNOG00000001828|serine/threonine kinase 38 like [Source:RGD Symbol%3BAcc:1564793]
rn6_v1_chr11_-_87815043_87815043	0.0600439	Sox2	ENSRNOT00000002552|LOC100911248|ENSRNOG00000001868|crk-like protein-like [Source:RGD Symbol%3BAcc:6493647]
rn6_v1_chr18_+_68984051_68984051	0.0599406	Sox2	ENSRNOT00000002969|Stard6|ENSRNOG00000026324|StAR-related lipid transfer domain containing 6 [Source:RGD Symbol%3BAcc:1359639]
rn6_v1_chr7_-_130170609_130170609	0.0598985	Sox2	ENSRNOT00000088030|Dennd6b|ENSRNOG00000029866|DENN domain containing 6B [Source:RGD Symbol%3BAcc:1308012]
rn6_v1_chr7_+_63747577_63747686	0.0597741	Sox2	ENSRNOT00000086123|RGD1561648|ENSRNOG00000023824|RGD1561648 [Source:RGD Symbol%3BAcc:1561648]	ENSRNOT00000067395|RGD1561648|ENSRNOG00000023824|RGD1561648 [Source:RGD Symbol%3BAcc:1561648]	ENSRNOT00000080052|RGD1561648|ENSRNOG00000023824|RGD1561648 [Source:RGD Symbol%3BAcc:1561648]
rn6_v1_chr1_+_274309758_274309758	0.0595058	Sox2	ENSRNOT00000019560|Smc3|ENSRNOG00000014173|structural maintenance of chromosomes 3 [Source:RGD Symbol%3BAcc:62006]
rn6_v1_chr8_+_36850324_36850324	0.0591021	Sox2	ENSRNOT00000060448|Pate2|ENSRNOG00000033981|prostate and testis expressed 2 [Source:RGD Symbol%3BAcc:2320100]
rn6_v1_chr1_-_220204032_220204032	0.0589798	Sox2	ENSRNOT00000027038|Peli3|ENSRNOG00000019950|pellino E3 ubiquitin protein ligase family member 3 [Source:RGD Symbol%3BAcc:1305989]
rn6_v1_chr4_-_56114254_56114254	0.0582518	Sox2	ENSRNOT00000010673|Lrrc4|ENSRNOG00000008098|leucine rich repeat containing 4 [Source:RGD Symbol%3BAcc:1560026]
rn6_v1_chr5_-_77945016_77945016	0.0581663	Sox2	ENSRNOT00000076223|Zfp37|ENSRNOG00000051078|zinc finger protein 37 [Source:RGD Symbol%3BAcc:620723]
rn6_v1_chr3_+_160092975_160092975	0.0580751	Sox2	ENSRNOT00000080707|Pkig|ENSRNOG00000010235|cAMP-dependent protein kinase inhibitor gamma [Source:RGD Symbol%3BAcc:628775]
rn6_v1_chr12_-_18531161_18531161	0.0580108	Sox2	ENSRNOT00000037829|Akap17a|ENSRNOG00000028211|A-kinase anchoring protein 17A [Source:RGD Symbol%3BAcc:1564640]
rn6_v1_chr3_-_140728129_140728129	0.0577347	Sox2	ENSRNOT00000015637|Ralgapa2|ENSRNOG00000036964|Ral GTPase activating protein catalytic alpha subunit 2 [Source:RGD Symbol%3BAcc:1308023]
rn6_v1_chr10_+_58784660_58784660	0.0576377	Sox2	ENSRNOT00000019925|LOC100912483|ENSRNOG00000014865|uncharacterized LOC100912483 [Source:RGD Symbol%3BAcc:6486589]
rn6_v1_chrX_-_4945944_4945944	0.0575405	Sox2	ENSRNOT00000077238|Kdm6a|ENSRNOG00000052721|lysine demethylase 6A [Source:RGD Symbol%3BAcc:9275041]
rn6_v1_chr5_+_120498883_120498883	0.0575091	Sox2	ENSRNOT00000007859|Leprot|ENSRNOG00000050849|leptin receptor overlapping transcript [Source:RGD Symbol%3BAcc:621034]
rn6_v1_chr14_-_103321270_103321270	0.0572548	Sox2	ENSRNOT00000006157|Meis1|ENSRNOG00000004606|Meis homeobox 1 [Source:RGD Symbol%3BAcc:1585482]
rn6_v1_chr1_+_220307394_220307394	0.0572431	Sox2	ENSRNOT00000071891|LOC108348052|ENSRNOG00000050201|equilibrative nucleoside transporter 2 [Source:RGD Symbol%3BAcc:11407640]
rn6_v1_chr11_+_86852711_86852711	0.0571222	Sox2	ENSRNOT00000002581|Dgcr8|ENSRNOG00000001886|DGCR8 microprocessor complex subunit [Source:RGD Symbol%3BAcc:1306365]
rn6_v1_chr1_-_198320075_198320075	0.0570206	Sox2	ENSRNOT00000081291|Taok2|ENSRNOG00000019964|TAO kinase 2 [Source:RGD Symbol%3BAcc:621590]
rn6_v1_chr1_-_69287538_69287538	0.0569636	Sox2	ENSRNOT00000071232|LOC102546678|ENSRNOG00000047013|transmembrane gamma-carboxyglutamic acid protein 3-like [Source:RGD Symbol%3BAcc:7696879]
rn6_v1_chr8_+_4440876_4440980	0.0564253	Sox2	ENSRNOT00000049325|Pdgfd|ENSRNOG00000029148|platelet derived growth factor D [Source:RGD Symbol%3BAcc:621880]	ENSRNOT00000076529|Pdgfd|ENSRNOG00000029148|platelet derived growth factor D [Source:RGD Symbol%3BAcc:621880]	ENSRNOT00000076748|Pdgfd|ENSRNOG00000029148|platelet derived growth factor D [Source:RGD Symbol%3BAcc:621880]
rn6_v1_chr5_-_64225844_64225844	0.0563147	Sox2	ENSRNOT00000011401|Tex10|ENSRNOG00000008618|testis expressed 10 [Source:RGD Symbol%3BAcc:1312045]
rn6_v1_chr6_+_109710781_109710781	0.056141	Sox2	ENSRNOT00000012895|Ttll5|ENSRNOG00000009318|tubulin tyrosine ligase like 5 [Source:RGD Symbol%3BAcc:1563583]
rn6_v1_chr1_-_191984858_191984858	0.0560873	Sox2	ENSRNOT00000025309|Gga2|ENSRNOG00000018599|golgi associated%2C gamma adaptin ear containing%2C ARF binding protein 2 [Source:RGD Symbol%3BAcc:1304800]
rn6_v1_chr10_-_65424802_65424802	0.0555467	Sox2	ENSRNOT00000018468|Traf4|ENSRNOG00000013169|Tnf receptor associated factor 4 [Source:RGD Symbol%3BAcc:1306708]
rn6_v1_chr9_+_38396449_38396449	0.0555271	Sox2	ENSRNOT00000017022|Zfp451|ENSRNOG00000012718|zinc finger protein 451 [Source:RGD Symbol%3BAcc:1305865]
rn6_v1_chr1_-_178367828_178367828	0.0554925	Sox2	ENSRNOT00000050823|AABR07071968.1|ENSRNOG00000033924|
rn6_v1_chr7_-_18612118_18612147	0.0554532	Sox2	ENSRNOT00000078122|Rab11b|ENSRNOG00000007648|RAB11B%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:68369]	ENSRNOT00000010197|Rab11b|ENSRNOG00000007648|RAB11B%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:68369]
rn6_v1_chr10_+_108750620_108750620	0.0553064	Sox2	ENSRNOT00000005337|Rptor|ENSRNOG00000003821|regulatory associated protein of MTOR%2C complex 1 [Source:RGD Symbol%3BAcc:1311784]
rn6_v1_chr9_+_88607508_88607508	0.0551742	Sox2	ENSRNOT00000021309|Agfg1|ENSRNOG00000015619|ArfGAP with FG repeats 1 [Source:RGD Symbol%3BAcc:1560041]
rn6_v1_chr20_+_38935820_38935820	0.0550229	Sox2	ENSRNOT00000001059|Hsf2|ENSRNOG00000000808|heat shock transcription factor 2 [Source:RGD Symbol%3BAcc:68395]
rn6_v1_chr17_+_78764506_78764506	0.0550179	Sox2	ENSRNOT00000077953|Suv39h2|ENSRNOG00000015585|suppressor of variegation 3-9 homolog 2 [Source:RGD Symbol%3BAcc:1306969]
rn6_v1_chr11_+_73738433_73738433	0.0547984	Sox2	ENSRNOT00000002353|Tmem44|ENSRNOG00000001726|transmembrane protein 44 [Source:RGD Symbol%3BAcc:1563737]
rn6_v1_chr6_+_18877907_18877907	0.0544553	Sox2	ENSRNOT00000084222|Alkbh8|ENSRNOG00000024525|alkB homolog 8%2C tRNA methyltransferase [Source:RGD Symbol%3BAcc:1304687]
rn6_v1_chr2_+_188476820_188476820	0.0544426	Sox2	ENSRNOT00000027793|Clk2|ENSRNOG00000020500|CDC-like kinase 2 [Source:RGD Symbol%3BAcc:1359711]
rn6_v1_chr1_+_101599018_101599018	0.0544235	Sox2	ENSRNOT00000028494|Fut1|ENSRNOG00000020995|fucosyltransferase 1 [Source:RGD Symbol%3BAcc:2638]
rn6_v1_chr15_-_34400449_34400449	0.0537578	Sox2	ENSRNOT00000048455|Rabggta|ENSRNOG00000030483|Rab geranylgeranyltransferase%2C alpha subunit [Source:RGD Symbol%3BAcc:621697]
rn6_v1_chr5_+_62840360_62840360	0.0535999	Sox2	ENSRNOT00000088385|Col15a1|ENSRNOG00000060381|collagen type XV alpha 1 chain [Source:RGD Symbol%3BAcc:1310820]
rn6_v1_chr7_-_107768072_107768072	0.0535118	Sox2	ENSRNOT00000093189|Ndrg1|ENSRNOG00000007393|N-myc downstream regulated 1 [Source:RGD Symbol%3BAcc:1307303]
rn6_v1_chr12_-_44962656_44962656	0.0534876	Sox2	ENSRNOT00000001499|Wsb2|ENSRNOG00000001135|WD repeat and SOCS box-containing 2 [Source:RGD Symbol%3BAcc:1359599]
rn6_v1_chr8_+_118206698_118206703	0.0534025	Sox2	ENSRNOT00000082607|Smarcc1|ENSRNOG00000020804|SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily c%2C member 1 [Source:RGD Symbol%3BAcc:1304850]	ENSRNOT00000064140|Smarcc1|ENSRNOG00000020804|SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily c%2C member 1 [Source:RGD Symbol%3BAcc:1304850]
rn6_v1_chr1_+_67340809_67340809	0.0533077	Sox2	ENSRNOT00000045266|LOC100362054|ENSRNOG00000031178|mCG114696-like [Source:RGD Symbol%3BAcc:2318927]
rn6_v1_chr15_-_28611946_28611946	0.0531321	Sox2	ENSRNOT00000016288|Supt16h|ENSRNOG00000011953|SPT16 homolog%2C facilitates chromatin remodeling subunit [Source:RGD Symbol%3BAcc:1310032]
rn6_v1_chr6_-_138249382_138249391	0.0531267	Sox2	ENSRNOT00000085678|Ighm|ENSRNOG00000034190|immunoglobulin heavy constant mu [Source:MGI Symbol%3BAcc:MGI:96448]	ENSRNOT00000006912|Ighm|ENSRNOG00000034190|immunoglobulin heavy constant mu [Source:MGI Symbol%3BAcc:MGI:96448]
rn6_v1_chr10_-_104358253_104358253	0.0524901	Sox2	ENSRNOT00000005942|Caskin2|ENSRNOG00000004310|cask-interacting protein 2 [Source:RGD Symbol%3BAcc:1309738]
rn6_v1_chr14_-_104523297_104523297	0.0523567	Sox2	ENSRNOT00000039523|Cep68|ENSRNOG00000027282|centrosomal protein 68 [Source:RGD Symbol%3BAcc:1309101]
rn6_v1_chr2_-_138833933_138833933	0.0522538	Sox2	ENSRNOT00000013343|Pcdh18|ENSRNOG00000009949|protocadherin 18 [Source:RGD Symbol%3BAcc:1305870]
rn6_v1_chr1_-_248377093_248377093	0.0521479	Sox2	ENSRNOT00000067612|Gldc|ENSRNOG00000011599|glycine decarboxylase [Source:RGD Symbol%3BAcc:1308660]
rn6_v1_chr4_-_66002444_66002444	0.0518764	Sox2	ENSRNOT00000018645|Zc3hav1l|ENSRNOG00000013944|zinc finger CCCH-type containing%2C antiviral 1 like [Source:RGD Symbol%3BAcc:1309236]
rn6_v1_chr10_-_89700283_89700283	0.0518062	Sox2	ENSRNOT00000028213|Etv4|ENSRNOG00000020792|ets variant 4 [Source:RGD Symbol%3BAcc:1306524]
rn6_v1_chr7_+_11556192_11556192	0.0516663	Sox2	ENSRNOT00000046078|Diras1|ENSRNOG00000029738|DIRAS family GTPase 1 [Source:RGD Symbol%3BAcc:1310445]
rn6_v1_chr17_-_44639919_44639919	0.0516583	Sox2	ENSRNOT00000079676|Zfp184|ENSRNOG00000061612|zinc finger protein 184 [Source:RGD Symbol%3BAcc:1304798]
rn6_v1_chr2_-_188660179_188660179	0.051525	Sox2	ENSRNOT00000027935|Efna4|ENSRNOG00000020588|ephrin A4 [Source:RGD Symbol%3BAcc:1307808]
rn6_v1_chr6_-_18351536_18351536	0.0515052	Sox2	ENSRNOT00000061588|Crnkl1|ENSRNOG00000040045|crooked neck pre-mRNA splicing factor 1 [Source:RGD Symbol%3BAcc:620507]
rn6_v1_chr14_+_48726045_48726045	0.0513263	Sox2	ENSRNOT00000086646|Arap2|ENSRNOG00000056826|ArfGAP with RhoGAP domain%2C ankyrin repeat and PH domain 2 [Source:RGD Symbol%3BAcc:1306452]
rn6_v1_chr10_+_70370300_70370447	0.0511749	Sox2	ENSRNOT00000055957|Slfn2|ENSRNOG00000037113|schlafen 2 [Source:RGD Symbol%3BAcc:1308645]	ENSRNOT00000076536|Slfn2|ENSRNOG00000037113|schlafen 2 [Source:RGD Symbol%3BAcc:1308645]
rn6_v1_chr6_+_33786197_33786197	0.0510647	Sox2	ENSRNOT00000082598|Pum2|ENSRNOG00000006180|pumilio RNA-binding family member 2 [Source:RGD Symbol%3BAcc:1311024]
rn6_v1_chr14_-_45376127_45376127	0.0507267	Sox2	ENSRNOT00000059247|AABR07015015.2|ENSRNOG00000057505|
rn6_v1_chr11_+_47061354_47061354	0.0507103	Sox2	ENSRNOT00000039997|Pcnp|ENSRNOG00000028411|PEST proteolytic signal containing nuclear protein [Source:RGD Symbol%3BAcc:1563775]
rn6_v1_chr10_-_72235888_72235888	0.0500994	Sox2	ENSRNOT00000039481|Znhit3|ENSRNOG00000027818|zinc finger%2C HIT-type containing 3 [Source:RGD Symbol%3BAcc:1598226]
rn6_v1_chr15_-_18675431_18675431	0.0496779	Sox2	ENSRNOT00000080794|Abhd6|ENSRNOG00000008167|abhydrolase domain containing 6 [Source:RGD Symbol%3BAcc:1359323]
rn6_v1_chrX_-_1714061_1714061	0.0495894	Sox2	ENSRNOT00000011592|Cdk16|ENSRNOG00000008578|cyclin-dependent kinase 16 [Source:RGD Symbol%3BAcc:620584]
rn6_v1_chr9_-_119190698_119190698	0.0495158	Sox2	ENSRNOT00000021534|Tgif1|ENSRNOG00000015906|TGFB-induced factor homeobox 1 [Source:RGD Symbol%3BAcc:1310517]
rn6_v1_chr10_+_63405596_63405596	0.0495136	Sox2	ENSRNOT00000077063|Gosr1|ENSRNOG00000003971|golgi SNAP receptor complex member 1 [Source:RGD Symbol%3BAcc:71093]
rn6_v1_chr16_-_7681576_7681576	0.0494891	Sox2	ENSRNOT00000026550|Colq|ENSRNOG00000019615|collagen like tail subunit of asymmetric acetylcholinesterase [Source:RGD Symbol%3BAcc:2377]
rn6_v1_chr13_-_44798543_44798543	0.0491702	Sox2	ENSRNOT00000005355|Zranb3|ENSRNOG00000003979|zinc finger RANBP2-type containing 3 [Source:RGD Symbol%3BAcc:1564952]
rn6_v1_chrX_-_18890090_18890090	0.0490759	Sox2	ENSRNOT00000041039|Klf8|ENSRNOG00000039057|Kruppel-like factor 8 [Source:RGD Symbol%3BAcc:1565831]
rn6_v1_chr18_+_30574627_30574627	0.0490639	Sox2	ENSRNOT00000060484|Pcdhb19|ENSRNOG00000039469|protocadherin beta 19 [Source:RGD Symbol%3BAcc:1549697]
rn6_v1_chr5_-_139748489_139748489	0.0490567	Sox2	ENSRNOT00000078741|Nfyc|ENSRNOG00000010735|nuclear transcription factor Y subunit gamma [Source:RGD Symbol%3BAcc:3173]
rn6_v1_chr6_-_39363367_39363458	0.0488933	Sox2	ENSRNOT00000088687|Fam84a|ENSRNOG00000004084|family with sequence similarity 84%2C member A [Source:RGD Symbol%3BAcc:1305779]	ENSRNOT00000065531|Fam84a|ENSRNOG00000004084|family with sequence similarity 84%2C member A [Source:RGD Symbol%3BAcc:1305779]
rn6_v1_chr2_+_188087486_188087486	0.0481886	Sox2	ENSRNOT00000027455|Rit1|ENSRNOG00000020232|Ras-like without CAAX 1 [Source:RGD Symbol%3BAcc:1559874]
rn6_v1_chr16_-_50501921_50501921	0.0481526	Sox2	ENSRNOT00000081023|Fat1|ENSRNOG00000030954|FAT atypical cadherin 1 [Source:RGD Symbol%3BAcc:621254]
rn6_v1_chr1_-_175657485_175657485	0.0480924	Sox2	ENSRNOT00000024561|rnf141|ENSRNOG00000017900|ring finger protein 141 [Source:RGD Symbol%3BAcc:1303154]
rn6_v1_chr8_+_70712513_70712513	0.0480779	Sox2	ENSRNOT00000079548|Parp16|ENSRNOG00000029127|poly (ADP-ribose) polymerase family%2C member 16 [Source:RGD Symbol%3BAcc:1306243]
rn6_v1_chr4_+_3959640_3959640	0.0480587	Sox2	ENSRNOT00000009439|Paxip1|ENSRNOG00000007131|PAX interacting protein 1 [Source:RGD Symbol%3BAcc:1307547]
rn6_v1_chr10_-_56831243_56831243	0.0479774	Sox2	ENSRNOT00000025403|Slc16a13|ENSRNOG00000018785|solute carrier family 16%2C member 13 [Source:RGD Symbol%3BAcc:1359138]
rn6_v1_chr8_-_96132634_96132634	0.047918	Sox2	ENSRNOT00000041655|Syncrip|ENSRNOG00000000204|synaptotagmin binding%2C cytoplasmic RNA interacting protein [Source:RGD Symbol%3BAcc:1305683]
rn6_v1_chr1_-_164307084_164307084	0.0478978	Sox2	ENSRNOT00000086091|Serpinh1|ENSRNOG00000016831|serpin family H member 1 [Source:RGD Symbol%3BAcc:69302]
rn6_v1_chr3_+_148635775_148635775	0.0476212	Sox2	ENSRNOT00000067261|Tm9sf4|ENSRNOG00000009406|transmembrane 9 superfamily member 4 [Source:RGD Symbol%3BAcc:1307768]
rn6_v1_chr6_+_44225233_44225233	0.0475132	Sox2	ENSRNOT00000066593|Kidins220|ENSRNOG00000023176|kinase D-interacting substrate 220 [Source:RGD Symbol%3BAcc:619949]
rn6_v1_chr7_+_66742987_66742987	0.0474946	Sox2	ENSRNOT00000045130|Mon2|ENSRNOG00000004185|MON2 homolog%2C regulator of endosome-to-Golgi trafficking [Source:RGD Symbol%3BAcc:1308808]
rn6_v1_chr8_-_63350269_63350269	0.047481	Sox2	ENSRNOT00000042681|Cd276|ENSRNOG00000033608|Cd276 molecule [Source:RGD Symbol%3BAcc:727815]
rn6_v1_chr1_-_261051498_261051498	0.0474594	Sox2	ENSRNOT00000071417|Arhgap19|ENSRNOG00000048166|Rho GTPase activating protein 19 [Source:RGD Symbol%3BAcc:1593044]
rn6_v1_chr1_+_85112834_85112834	0.0472726	Sox2	ENSRNOT00000026107|Dyrk1b|ENSRNOG00000019254|dual specificity tyrosine phosphorylation regulated kinase 1B [Source:RGD Symbol%3BAcc:1307223]
rn6_v1_chr8_+_44990014_44990014	0.0468536	Sox2	ENSRNOT00000044608|Hspa8|ENSRNOG00000034066|heat shock protein family A (Hsp70) member 8 [Source:RGD Symbol%3BAcc:621725]
rn6_v1_chr3_-_122946289_122946289	0.0466013	Sox2	ENSRNOT00000055810|Pced1a|ENSRNOG00000021221|PC-esterase domain containing 1A [Source:RGD Symbol%3BAcc:1308836]
rn6_v1_chr7_-_81592206_81592206	0.0465255	Sox2	ENSRNOT00000007979|Angpt1|ENSRNOG00000005854|angiopoietin 1 [Source:RGD Symbol%3BAcc:628896]
rn6_v1_chr1_-_221015929_221015929	0.0464933	Sox2	ENSRNOT00000028137|Sipa1|ENSRNOG00000020726|signal-induced proliferation-associated 1 [Source:RGD Symbol%3BAcc:1303184]
rn6_v1_chr9_-_43139246_43139246	0.0464468	Sox2	ENSRNOT00000075882|Sema4c|ENSRNOG00000016254|semaphorin 4C [Source:RGD Symbol%3BAcc:1562837]
rn6_v1_chr7_+_2875909_2875909	0.0460031	Sox2	ENSRNOT00000028244|Smarcc2|ENSRNOG00000031135|SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily c%2C member 2 [Source:RGD Symbol%3BAcc:1597704]
rn6_v1_chr18_-_27749235_27749235	0.0458465	Sox2	ENSRNOT00000026696|Hspa9|ENSRNOG00000019525|heat shock protein family A member 9 [Source:RGD Symbol%3BAcc:1311806]
rn6_v1_chrX_+_86126157_86126157	0.0458021	Sox2	ENSRNOT00000006992|Klhl4|ENSRNOG00000005215|kelch-like family member 4 [Source:RGD Symbol%3BAcc:1565441]
rn6_v1_chr18_-_37132223_37132223	0.0457349	Sox2	ENSRNOT00000091634|Ppp2r2b|ENSRNOG00000018851|protein phosphatase 2%2C regulatory subunit B%2C beta [Source:RGD Symbol%3BAcc:631441]
rn6_v1_chr15_+_18399515_18399515	0.0456073	Sox2	ENSRNOT00000071273|Fam107a|ENSRNOG00000033261|family with sequence similarity 107%2C member A [Source:RGD Symbol%3BAcc:1306327]
rn6_v1_chr11_-_65209268_65209268	0.045485	Sox2	ENSRNOT00000077612|Gsk3b|ENSRNOG00000002833|glycogen synthase kinase 3 beta [Source:RGD Symbol%3BAcc:70982]
rn6_v1_chr9_+_82741920_82741920	0.0454374	Sox2	ENSRNOT00000027337|Slc4a3|ENSRNOG00000020138|solute carrier family 4 member 3 [Source:RGD Symbol%3BAcc:3712]
rn6_v1_chr3_-_64543100_64543100	0.0453564	Sox2	ENSRNOT00000025803|Zfp385b|ENSRNOG00000019065|zinc finger protein 385B [Source:RGD Symbol%3BAcc:1311181]
rn6_v1_chr19_+_56136904_56136904	0.0453193	Sox2	ENSRNOT00000022823|Spire2|ENSRNOG00000016920|spire-type actin nucleation factor 2 [Source:RGD Symbol%3BAcc:1305837]
rn6_v1_chr2_-_22059149_22059149	0.0451802	Sox2	ENSRNOT00000031909|Fam151b|ENSRNOG00000024136|family with sequence similarity 151%2C member B [Source:RGD Symbol%3BAcc:1561110]
rn6_v1_chr1_+_185210922_185210922	0.0451136	Sox2	ENSRNOT00000055120|Pik3c2a|ENSRNOG00000020479|phosphatidylinositol-4-phosphate 3-kinase%2C catalytic subunit type 2 alpha [Source:RGD Symbol%3BAcc:1310389]
rn6_v1_chr2_-_219458271_219458271	0.0450675	Sox2	ENSRNOT00000064735|Cdc14a|ENSRNOG00000014515|cell division cycle 14A [Source:RGD Symbol%3BAcc:1304649]
rn6_v1_chr17_+_45188248_45188248	0.045008	Sox2	ENSRNOT00000091609|Zscan26|ENSRNOG00000053518|zinc finger and SCAN domain containing 26 [Source:RGD Symbol%3BAcc:727885]
rn6_v1_chr18_+_53915807_53915807	0.0450023	Sox2	ENSRNOT00000026543|Adamts19|ENSRNOG00000019577|ADAM metallopeptidase with thrombospondin type 1 motif%2C 19 [Source:RGD Symbol%3BAcc:1308359]
rn6_v1_chr3_+_92640752_92640752	0.0448975	Sox2	ENSRNOT00000007604|Slc1a2|ENSRNOG00000005479|solute carrier family 1 member 2 [Source:RGD Symbol%3BAcc:3697]
rn6_v1_chr2_+_23289374_23289391	0.0445025	Sox2	ENSRNOT00000090666|Dmgdh|ENSRNOG00000023588|dimethylglycine dehydrogenase [Source:RGD Symbol%3BAcc:620453]	ENSRNOT00000032783|Dmgdh|ENSRNOG00000023588|dimethylglycine dehydrogenase [Source:RGD Symbol%3BAcc:620453]
rn6_v1_chr3_-_7164654_7164654	0.0444662	Sox2	ENSRNOT00000015068|Gtf3c5|ENSRNOG00000010981|general transcription factor IIIC subunit 5 [Source:RGD Symbol%3BAcc:1305173]
rn6_v1_chr5_-_9381214_9381214	0.0442189	Sox2	ENSRNOT00000039237|RGD1561849|ENSRNOG00000021663|similar to RIKEN cDNA 3110035E14 [Source:RGD Symbol%3BAcc:1561849]
rn6_v1_chr7_+_140716113_140716113	0.044207	Sox2	ENSRNOT00000033450|Tuba1c|ENSRNOG00000021438|tubulin%2C alpha 1C [Source:RGD Symbol%3BAcc:1307226]
rn6_v1_chr8_-_50246656_50246656	0.0441952	Sox2	ENSRNOT00000024240|Sidt2|ENSRNOG00000017871|SID1 transmembrane family%2C member 2 [Source:RGD Symbol%3BAcc:1308311]
rn6_v1_chr18_-_68983619_68983619	0.0439583	Sox2	ENSRNOT00000014670|LOC361346|ENSRNOG00000028677|similar to chromosome 18 open reading frame 54 [Source:RGD Symbol%3BAcc:1563837]
rn6_v1_chr18_+_31396922_31396922	0.0439542	Sox2	ENSRNOT00000026273|RGD735029|ENSRNOG00000019276|SEL1 domain containing protein RGD735029 [Source:RGD Symbol%3BAcc:735029]
rn6_v1_chr11_-_88016825_88016825	0.043875	Sox2	ENSRNOT00000079595|Hic2|ENSRNOG00000051458|HIC ZBTB transcriptional repressor 2 [Source:RGD Symbol%3BAcc:1305338]
rn6_v1_chr4_+_158088505_158088505	0.0437749	Sox2	ENSRNOT00000026643|Vwf|ENSRNOG00000019689|von Willebrand factor [Source:RGD Symbol%3BAcc:621759]
rn6_v1_chrX_+_9436707_9436707	0.0435048	Sox2	ENSRNOT00000004187|Cask|ENSRNOG00000003054|calcium/calmodulin dependent serine protein kinase [Source:RGD Symbol%3BAcc:62004]
rn6_v1_chr4_+_77519028_77519028	0.0431678	Sox2	ENSRNOT00000008743|Zfp398|ENSRNOG00000006703|zinc finger protein 398 [Source:RGD Symbol%3BAcc:1562129]
rn6_v1_chr20_-_4380600_4380600	0.0430895	Sox2	ENSRNOT00000068712|Egfl8|ENSRNOG00000000436|EGF-like-domain%2C multiple 8 [Source:RGD Symbol%3BAcc:1549706]
rn6_v1_chr14_+_39964588_39964588	0.0430698	Sox2	ENSRNOT00000003240|Gabrg1|ENSRNOG00000002360|gamma-aminobutyric acid type A receptor gamma 1 subunit [Source:RGD Symbol%3BAcc:621732]
rn6_v1_chr8_+_130581062_130581062	0.0429362	Sox2	ENSRNOT00000014323|Fam198a|ENSRNOG00000025676|family with sequence similarity 198%2C member A [Source:RGD Symbol%3BAcc:1305157]
rn6_v1_chr7_-_98197087_98197114	0.0428016	Sox2	ENSRNOT00000010484|Klhl38|ENSRNOG00000007896|kelch-like family member 38 [Source:RGD Symbol%3BAcc:1564169]	ENSRNOT00000079961|Klhl38|ENSRNOG00000007896|kelch-like family member 38 [Source:RGD Symbol%3BAcc:1564169]
rn6_v1_chr3_-_177095597_177095597	0.042783	Sox2	ENSRNOT00000029386|Samd10|ENSRNOG00000036719|sterile alpha motif domain containing 10 [Source:RGD Symbol%3BAcc:1563203]
rn6_v1_chr1_-_227002139_227002139	0.0426597	Sox2	ENSRNOT00000028405|Ccdc86|ENSRNOG00000020925|coiled-coil domain containing 86 [Source:RGD Symbol%3BAcc:1359280]
rn6_v1_chr19_+_57064908_57064908	0.0425641	Sox2	ENSRNOT00000065431|Galnt2|ENSRNOG00000019143|polypeptide N-acetylgalactosaminyltransferase 2 [Source:RGD Symbol%3BAcc:1310692]
rn6_v1_chr2_-_54777729_54777729	0.0421411	Sox2	ENSRNOT00000082548|C7|ENSRNOG00000061379|complement C7 [Source:RGD Symbol%3BAcc:620318]
rn6_v1_chr5_-_33664435_33664435	0.0421249	Sox2	ENSRNOT00000009047|Wwp1|ENSRNOG00000006328|WW domain containing E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1311734]
rn6_v1_chr12_-_45116665_45116665	0.0420976	Sox2	ENSRNOT00000089043|Taok3|ENSRNOG00000001138|TAO kinase 3 [Source:RGD Symbol%3BAcc:1562861]
rn6_v1_chr17_-_90315492_90315492	0.0416821	Sox2	ENSRNOT00000070807|Gng4|ENSRNOG00000047080|G protein subunit gamma 4 [Source:RGD Symbol%3BAcc:620806]
rn6_v1_chr6_-_64170122_64170151	0.0415779	Sox2	ENSRNOT00000093248|Dnajb9|ENSRNOG00000004006|DnaJ heat shock protein family (Hsp40) member B9 [Source:RGD Symbol%3BAcc:3070]	ENSRNOT00000005363|Dnajb9|ENSRNOG00000004006|DnaJ heat shock protein family (Hsp40) member B9 [Source:RGD Symbol%3BAcc:3070]
rn6_v1_chr1_-_214504569_214504569	0.0415626	Sox2	ENSRNOT00000082221|Chid1|ENSRNOG00000050181|chitinase domain containing 1 [Source:RGD Symbol%3BAcc:1308955]
rn6_v1_chr19_-_26053762_26053762	0.0414939	Sox2	ENSRNOT00000004646|MAST1|ENSRNOG00000003469|microtubule associated serine/threonine kinase 1 [Source:RGD Symbol%3BAcc:631372]
rn6_v1_chrX_-_124870329_124870329	0.0410781	Sox2	ENSRNOT00000065023|Cul4b|ENSRNOG00000002585|cullin 4B [Source:RGD Symbol%3BAcc:1564494]
rn6_v1_chr2_+_11658568_11658568	0.0409841	Sox2	ENSRNOT00000076408|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076416|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076992|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000075931|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076136|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076481|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076084|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076230|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076710|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]	ENSRNOT00000076239|Mef2c|ENSRNOG00000033134|myocyte enhancer factor 2C [Source:RGD Symbol%3BAcc:1563119]
rn6_v1_chr13_+_100817359_100817359	0.0407816	Sox2	ENSRNOT00000004330|Tp53bp2|ENSRNOG00000003237|tumor protein p53 binding protein%2C 2 [Source:RGD Symbol%3BAcc:1305461]
rn6_v1_chr18_+_30387937_30387937	0.0407244	Sox2	ENSRNOT00000027210|Pcdhb4|ENSRNOG00000027469|protocadherin beta 4 [Source:RGD Symbol%3BAcc:1308912]
rn6_v1_chr3_-_29984201_29984201	0.0406815	Sox2	ENSRNOT00000006350|Zeb2|ENSRNOG00000004677|zinc finger E-box binding homeobox 2 [Source:RGD Symbol%3BAcc:1307272]
rn6_v1_chr4_-_108008484_108008484	0.0404008	Sox2	ENSRNOT00000007971|Ctnna2|ENSRNOG00000006003|catenin alpha 2 [Source:RGD Symbol%3BAcc:1305060]
rn6_v1_chr4_-_153028129_153028129	0.0403453	Sox2	ENSRNOT00000074558|Cecr6|ENSRNOG00000046851|cat eye syndrome chromosome region%2C candidate 6 [Source:RGD Symbol%3BAcc:1565302]
rn6_v1_chr13_-_91872954_91873096	0.0399138	Sox2	ENSRNOT00000004613|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]	ENSRNOT00000079263|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]
rn6_v1_chr15_-_28733513_28733513	0.0399005	Sox2	ENSRNOT00000078180|Sall2|ENSRNOG00000013287|spalt-like transcription factor 2 [Source:RGD Symbol%3BAcc:1309272]
rn6_v1_chr8_+_71514281_71514281	0.0398916	Sox2	ENSRNOT00000022256|Ns5atp9|ENSRNOG00000016561|NS5A (hepatitis C virus) transactivated protein 9 [Source:RGD Symbol%3BAcc:1303041]
rn6_v1_chr1_-_246110218_246110218	0.0398367	Sox2	ENSRNOT00000077544|Rfx3|ENSRNOG00000014486|regulatory factor X3 [Source:RGD Symbol%3BAcc:1307779]
rn6_v1_chr16_-_71319052_71319052	0.0397191	Sox2	ENSRNOT00000050980|Fgfr1|ENSRNOG00000016050|Fibroblast growth factor receptor 1 [Source:RGD Symbol%3BAcc:620713]
rn6_v1_chr8_+_45797315_45797315	0.0396693	Sox2	ENSRNOT00000059997|AABR07070046.1|ENSRNOG00000039200|
rn6_v1_chr4_-_146839397_146839397	0.0395147	Sox2	ENSRNOT00000010338|Vgll4|ENSRNOG00000007822|vestigial-like family member 4 [Source:RGD Symbol%3BAcc:1311653]
rn6_v1_chr6_-_41039437_41039437	0.0393844	Sox2	ENSRNOT00000005774|Trib2|ENSRNOG00000004110|tribbles pseudokinase 2 [Source:RGD Symbol%3BAcc:1564451]
rn6_v1_chr9_-_10427746_10427746	0.0393721	Sox2	ENSRNOT00000071207|Catsperd|ENSRNOG00000048818|cation channel sperm associated auxiliary subunit delta [Source:RGD Symbol%3BAcc:1594167]
rn6_v1_chr13_-_100414226_100414226	0.0392079	Sox2	ENSRNOT00000085188|Enah|ENSRNOG00000031934|enabled homolog (Drosophila) [Source:RGD Symbol%3BAcc:1307666]
rn6_v1_chr9_+_95309759_95309759	0.039194	Sox2	ENSRNOT00000051438|Mroh2a|ENSRNOG00000042182|maestro heat-like repeat family member 2A [Source:RGD Symbol%3BAcc:1565687]
rn6_v1_chr4_+_82783686_82783686	0.0391917	Sox2	ENSRNOT00000041988|Tax1bp1|ENSRNOG00000008393|Tax1 binding protein 1 [Source:RGD Symbol%3BAcc:708579]
rn6_v1_chr15_-_33218456_33218456	0.0389969	Sox2	ENSRNOT00000017753|Ajuba|ENSRNOG00000012791|ajuba LIM protein [Source:RGD Symbol%3BAcc:620407]
rn6_v1_chr8_+_22402890_22402890	0.0389827	Sox2	ENSRNOT00000079230|Ilf3|ENSRNOG00000022741|interleukin enhancer binding factor 3 [Source:RGD Symbol%3BAcc:619734]
rn6_v1_chr6_-_144123596_144123729	0.038651	Sox2	ENSRNOT00000006144|Wdr60|ENSRNOG00000004520|WD repeat domain 60 [Source:RGD Symbol%3BAcc:1306493]	ENSRNOT00000087845|Wdr60|ENSRNOG00000004520|WD repeat domain 60 [Source:RGD Symbol%3BAcc:1306493]
rn6_v1_chr10_+_3179346_3179346	0.0386437	Sox2	ENSRNOT00000082082|Rrn3|ENSRNOG00000003326|RRN3 homolog%2C RNA polymerase I transcription factor [Source:RGD Symbol%3BAcc:1305001]
rn6_v1_chr13_+_53506925_53506925	0.0386098	Sox2	ENSRNOT00000088133|Zfp281|ENSRNOG00000058643|zinc finger protein 281 [Source:RGD Symbol%3BAcc:1305139]
rn6_v1_chr10_+_88992487_88992487	0.0385822	Sox2	ENSRNOT00000027061|Coasy|ENSRNOG00000019918|Coenzyme A synthase [Source:RGD Symbol%3BAcc:1549767]
rn6_v1_chr7_-_97902585_97902585	0.0384789	Sox2	ENSRNOT00000008382|RGD1310852|ENSRNOG00000006370|similar to RIKEN cDNA 9130401M01 [Source:RGD Symbol%3BAcc:1310852]
rn6_v1_chr5_+_162031722_162031722	0.0383567	Sox2	ENSRNOT00000020483|Lrrc38|ENSRNOG00000015264|leucine rich repeat containing 38 [Source:RGD Symbol%3BAcc:1311416]
rn6_v1_chr3_-_57913999_57913999	0.0383187	Sox2	ENSRNOT00000090426|Slc25a12|ENSRNOG00000022922|solute carrier family 25 member 12 [Source:RGD Symbol%3BAcc:1305181]
rn6_v1_chr11_-_86793791_86793791	0.0380563	Sox2	ENSRNOT00000044635|Arvcf|ENSRNOG00000001888|armadillo repeat gene deleted in velo-cardio-facial syndrome [Source:RGD Symbol%3BAcc:1306655]
rn6_v1_chr7_+_110031696_110031696	0.0380414	Sox2	ENSRNOT00000012753|Khdrbs3|ENSRNOG00000009539|KH RNA binding domain containing%2C signal transduction associated 3 [Source:RGD Symbol%3BAcc:620921]
rn6_v1_chr11_-_25456836_25456836	0.038013	Sox2	ENSRNOT00000085444|Adamts5|ENSRNOG00000057794|ADAM metallopeptidase with thrombospondin type 1 motif%2C 5 [Source:RGD Symbol%3BAcc:735196]
rn6_v1_chr16_-_50501716_50501716	0.0379485	Sox2	ENSRNOT00000067486|Fat1|ENSRNOG00000030954|FAT atypical cadherin 1 [Source:RGD Symbol%3BAcc:621254]
rn6_v1_chr2_+_187893875_187893875	0.0378978	Sox2	ENSRNOT00000093014|Mex3a|ENSRNOG00000058654|mex-3 RNA binding family member A [Source:RGD Symbol%3BAcc:1564904]
rn6_v1_chr4_+_91373942_91373942	0.0377752	Sox2	ENSRNOT00000043827|Ccser1|ENSRNOG00000029321|coiled-coil serine-rich protein 1 [Source:RGD Symbol%3BAcc:1565731]
rn6_v1_chr1_-_165530095_165530095	0.0377677	Sox2	ENSRNOT00000024256|Dnajb13|ENSRNOG00000017975|DnaJ heat shock protein family (Hsp40) member B13 [Source:RGD Symbol%3BAcc:1359131]
rn6_v1_chr18_+_70248713_70248713	0.0373605	Sox2	ENSRNOT00000032202|Mbd1|ENSRNOG00000024104|methyl-CpG binding domain protein 1 [Source:RGD Symbol%3BAcc:1305980]
rn6_v1_chr1_-_134867001_134867001	0.0371252	Sox2	ENSRNOT00000090149|Chd2|ENSRNOG00000012716|chromodomain helicase DNA binding protein 2 [Source:RGD Symbol%3BAcc:1310056]
rn6_v1_chr9_+_16508799_16508799	0.0369859	Sox2	ENSRNOT00000021803|Rpl7l1|ENSRNOG00000016269|ribosomal protein L7-like 1 [Source:RGD Symbol%3BAcc:1308469]
rn6_v1_chr2_-_34963207_34963207	0.0369066	Sox2	ENSRNOT00000017870|Fam159b|ENSRNOG00000013372|family with sequence similarity 159%2C member B [Source:RGD Symbol%3BAcc:1564672]
rn6_v1_chr9_+_65279675_65279675	0.0368365	Sox2	ENSRNOT00000019486|Bzw1|ENSRNOG00000013977|basic leucine zipper and W2 domains 1 [Source:RGD Symbol%3BAcc:735129]
rn6_v1_chr10_+_94407559_94407559	0.0362618	Sox2	ENSRNOT00000013046|Ddx42|ENSRNOG00000009474|DEAD-box helicase 42 [Source:RGD Symbol%3BAcc:1304909]
rn6_v1_chr3_+_129599353_129599353	0.03625	Sox2	ENSRNOT00000008734|Snap25|ENSRNOG00000006037|synaptosomal-associated protein 25 [Source:RGD Symbol%3BAcc:3728]
rn6_v1_chr1_+_78800754_78800754	0.0361056	Sox2	ENSRNOT00000084601|Dact3|ENSRNOG00000052256|dishevelled-binding antagonist of beta-catenin 3 [Source:RGD Symbol%3BAcc:1563892]
rn6_v1_chr1_+_50828585_50828585	0.0360395	Sox2	ENSRNOT00000086441|LOC108348175|ENSRNOG00000048297|protein quaking-like [Source:RGD Symbol%3BAcc:11514364]	ENSRNOT00000023290|LOC108348175|ENSRNOG00000048297|protein quaking-like [Source:RGD Symbol%3BAcc:11514364]	ENSRNOT00000035402|LOC108348175|ENSRNOG00000048297|protein quaking-like [Source:RGD Symbol%3BAcc:11514364]
rn6_v1_chr10_+_85608544_85608544	0.0357041	Sox2	ENSRNOT00000092122|Mllt6|ENSRNOG00000053285|MLLT6%2C PHD finger domain containing [Source:RGD Symbol%3BAcc:1306689]
rn6_v1_chr3_+_11679530_11679530	0.0354089	Sox2	ENSRNOT00000074562|Eng|ENSRNOG00000050190|endoglin [Source:RGD Symbol%3BAcc:1593188]	ENSRNOT00000071801|Eng|ENSRNOG00000050190|endoglin [Source:RGD Symbol%3BAcc:1593188]
rn6_v1_chr3_-_113057791_113057791	0.0353962	Sox2	ENSRNOT00000056190|Tgm7l1|ENSRNOG00000037203|transglutaminase 7-like 1 [Source:RGD Symbol%3BAcc:1593350]
rn6_v1_chr10_+_81693770_81693885	0.035231	Sox2	ENSRNOT00000003777|Spag9|ENSRNOG00000002749|sperm associated antigen 9 [Source:RGD Symbol%3BAcc:1311289]	ENSRNOT00000085681|Spag9|ENSRNOG00000002749|sperm associated antigen 9 [Source:RGD Symbol%3BAcc:1311289]
rn6_v1_chr13_-_100405339_100405339	0.0350217	Sox2	ENSRNOT00000039974|Enah|ENSRNOG00000031934|enabled homolog (Drosophila) [Source:RGD Symbol%3BAcc:1307666]
rn6_v1_chr1_-_211196868_211196868	0.0348267	Sox2	ENSRNOT00000022714|Mapk1ip1|ENSRNOG00000016935|mitogen-activated protein kinase 1 interacting protein 1 [Source:RGD Symbol%3BAcc:1565431]
rn6_v1_chr1_-_270472866_270472866	0.0346562	Sox2	ENSRNOT00000015979|Sorcs1|ENSRNOG00000011313|sortilin-related VPS10 domain containing receptor 1 [Source:RGD Symbol%3BAcc:1305910]
rn6_v1_chr18_-_6781841_6781841	0.0346362	Sox2	ENSRNOT00000077606|Aqp4|ENSRNOG00000016043|aquaporin 4 [Source:RGD Symbol%3BAcc:2143]	ENSRNOT00000048109|Aqp4|ENSRNOG00000016043|aquaporin 4 [Source:RGD Symbol%3BAcc:2143]
rn6_v1_chr6_-_21600451_21600451	0.0345543	Sox2	ENSRNOT00000047674|Ltbp1|ENSRNOG00000033090|latent transforming growth factor beta binding protein 1 [Source:RGD Symbol%3BAcc:68379]
rn6_v1_chr2_+_119112513_119112513	0.0345504	Sox2	ENSRNOT00000015460|Actl6a|ENSRNOG00000011553|actin-like 6A [Source:RGD Symbol%3BAcc:1307747]
rn6_v1_chr7_-_117267803_117267803	0.0345027	Sox2	ENSRNOT00000082271|Plec|ENSRNOG00000023781|plectin [Source:RGD Symbol%3BAcc:621649]
rn6_v1_chr14_+_82762190_82762190	0.0344319	Sox2	ENSRNOT00000057929|Ctbp1|ENSRNOG00000005428|C-terminal binding protein 1 [Source:RGD Symbol%3BAcc:2441]
rn6_v1_chr18_+_27576129_27576129	0.0343203	Sox2	ENSRNOT00000070930|Kdm3b|ENSRNOG00000050200|lysine demethylase 3B [Source:RGD Symbol%3BAcc:1583423]
rn6_v1_chr9_+_111233147_111233147	0.0340072	Sox2	ENSRNOT00000056439|Ppip5k2|ENSRNOG00000011613|diphosphoinositol pentakisphosphate kinase 2 [Source:RGD Symbol%3BAcc:1590765]
rn6_v1_chr9_+_86874685_86874685	0.0339566	Sox2	ENSRNOT00000041337|NEWGENE_1305560|ENSRNOG00000023765|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:RGD Symbol%3BAcc:9171458]
rn6_v1_chr3_-_3855981_3855981	0.0338813	Sox2	ENSRNOT00000079882|Inpp5e|ENSRNOG00000019039|inositol polyphosphate-5-phosphatase E [Source:RGD Symbol%3BAcc:620478]
rn6_v1_chr18_+_51785111_51785111	0.0338424	Sox2	ENSRNOT00000019351|Lmnb1|ENSRNOG00000013774|lamin B1 [Source:RGD Symbol%3BAcc:620522]
rn6_v1_chr9_+_111649631_111649631	0.0336505	Sox2	ENSRNOT00000056430|Fer|ENSRNOG00000015898|FER tyrosine kinase [Source:RGD Symbol%3BAcc:1306273]
rn6_v1_chr17_-_76188979_76188979	0.0336249	Sox2	ENSRNOT00000092442|Upf2|ENSRNOG00000023593|UPF2 regulator of nonsense transcripts homolog (yeast) [Source:RGD Symbol%3BAcc:1309178]
rn6_v1_chr15_+_57241968_57241968	0.0335504	Sox2	ENSRNOT00000082191|Lcp1|ENSRNOG00000010319|lymphocyte cytosolic protein 1 [Source:RGD Symbol%3BAcc:1308288]
rn6_v1_chr5_+_36076565_36076565	0.0332354	Sox2	ENSRNOT00000013599|Faxc|ENSRNOG00000010106|failed axon connections homolog [Source:RGD Symbol%3BAcc:1562449]
rn6_v1_chr3_-_92749121_92749121	0.0332294	Sox2	ENSRNOT00000008760|Cd44|ENSRNOG00000006094|CD44 molecule (Indian blood group) [Source:RGD Symbol%3BAcc:2307]
rn6_v1_chrX_-_70460536_70460536	0.0331592	Sox2	ENSRNOT00000076824|Pdzd11|ENSRNOG00000002838|PDZ domain containing 11 [Source:RGD Symbol%3BAcc:1560007]
rn6_v1_chr2_-_258932200_258932200	0.0330955	Sox2	ENSRNOT00000045905|Adgrl2|ENSRNOG00000032660|adhesion G protein-coupled receptor L2 [Source:RGD Symbol%3BAcc:620835]
rn6_v1_chr6_-_94834908_94834908	0.0329043	Sox2	ENSRNOT00000006284|L3hypdh|ENSRNOG00000004503|trans-L-3-hydroxyproline dehydratase [Source:RGD Symbol%3BAcc:1305721]
rn6_v1_chr7_+_116739062_116739156	0.032816	Sox2	ENSRNOT00000075837|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]	ENSRNOT00000076670|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]	ENSRNOT00000010065|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]
rn6_v1_chr8_+_131933387_131933387	0.0326725	Sox2	ENSRNOT00000043784|Zfp167|ENSRNOG00000004104|zinc finger protein 167 [Source:RGD Symbol%3BAcc:1305242]
rn6_v1_chr4_-_100660140_100660140	0.0326127	Sox2	ENSRNOT00000020005|Tcf7l1|ENSRNOG00000014753|transcription factor 7 like 1 [Source:RGD Symbol%3BAcc:1311671]
rn6_v1_chr7_+_49429613_49429613	0.0323679	Sox2	ENSRNOT00000072526|Lin7a|ENSRNOG00000004527|lin-7 homolog A%2C crumbs cell polarity complex component [Source:RGD Symbol%3BAcc:621256]
rn6_v1_chr4_-_27331508_27331582	0.0320062	Sox2	ENSRNOT00000090751|Akap9|ENSRNOG00000026319|A-kinase anchoring protein 9 [Source:RGD Symbol%3BAcc:620833]	ENSRNOT00000010118|Akap9|ENSRNOG00000026319|A-kinase anchoring protein 9 [Source:RGD Symbol%3BAcc:620833]
rn6_v1_chr16_-_69961162_69961162	0.0317025	Sox2	ENSRNOT00000074955|Prrg3|ENSRNOG00000045663|proline rich and Gla domain 3 [Source:RGD Symbol%3BAcc:1560309]
rn6_v1_chr4_-_77489535_77489535	0.031699	Sox2	ENSRNOT00000008728|Pdia4|ENSRNOG00000006228|protein disulfide isomerase family A%2C member 4 [Source:RGD Symbol%3BAcc:619835]
rn6_v1_chr6_+_111180108_111180108	0.0314462	Sox2	ENSRNOT00000082027|Gstz1|ENSRNOG00000047708|glutathione S-transferase zeta 1 [Source:RGD Symbol%3BAcc:1589363]
rn6_v1_chr12_+_38345456_38345456	0.0313825	Sox2	ENSRNOT00000001685|Clip1|ENSRNOG00000001247|CAP-GLY domain containing linker protein 1 [Source:RGD Symbol%3BAcc:67404]
rn6_v1_chr8_-_64268555_64268555	0.0313166	Sox2	ENSRNOT00000013581|Arih1|ENSRNOG00000009887|ariadne RBR E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1308131]	ENSRNOT00000084758|Arih1|ENSRNOG00000009887|ariadne RBR E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1308131]
rn6_v1_chr12_+_16084266_16084271	0.0312788	Sox2	ENSRNOT00000079866|Ttyh3|ENSRNOG00000055583|tweety family member 3 [Source:RGD Symbol%3BAcc:1309549]	ENSRNOT00000080774|Ttyh3|ENSRNOG00000055583|tweety family member 3 [Source:RGD Symbol%3BAcc:1309549]
rn6_v1_chr3_-_60166013_60166013	0.0312387	Sox2	ENSRNOT00000024922|Wipf1|ENSRNOG00000018406|WAS/WASL interacting protein family%2C member 1 [Source:RGD Symbol%3BAcc:620887]
rn6_v1_chr8_+_59711549_59711549	0.0309388	Sox2	ENSRNOT00000019539|Ube2q2|ENSRNOG00000014529|ubiquitin conjugating enzyme E2 Q2 [Source:RGD Symbol%3BAcc:1307680]
rn6_v1_chr3_+_3767394_3767394	0.030698	Sox2	ENSRNOT00000067840|Gpsm1|ENSRNOG00000018666|G-protein signaling modulator 1 [Source:RGD Symbol%3BAcc:628682]
rn6_v1_chr5_+_152680407_152680407	0.0303176	Sox2	ENSRNOT00000076864|Stmn1|ENSRNOG00000016810|stathmin 1 [Source:RGD Symbol%3BAcc:2992]
rn6_v1_chr17_-_10001901_10001901	0.0301717	Sox2	ENSRNOT00000082836|Fgfr4|ENSRNOG00000016763|fibroblast growth factor receptor 4 [Source:RGD Symbol%3BAcc:2612]
rn6_v1_chr5_-_12563429_12563429	0.0298904	Sox2	ENSRNOT00000059625|St18|ENSRNOG00000006200|suppression of tumorigenicity 18 [Source:RGD Symbol%3BAcc:708566]
rn6_v1_chr12_+_23151180_23151180	0.0298469	Sox2	ENSRNOT00000059486|Cux1|ENSRNOG00000001424|cut-like homeobox 1 [Source:RGD Symbol%3BAcc:620618]
rn6_v1_chr16_-_59721227_59721227	0.0297077	Sox2	ENSRNOT00000015166|Prag1|ENSRNOG00000011407|PEAK1 related kinase activating pseudokinase 1 [Source:RGD Symbol%3BAcc:1311793]
rn6_v1_chr7_-_117267402_117267402	0.0296748	Sox2	ENSRNOT00000088945|Plec|ENSRNOG00000023781|plectin [Source:RGD Symbol%3BAcc:621649]
rn6_v1_chr16_+_23475351_23475351	0.0296138	Sox2	ENSRNOT00000068177|Psd3|ENSRNOG00000013884|pleckstrin and Sec7 domain containing 3 [Source:RGD Symbol%3BAcc:1559968]
rn6_v1_chr1_-_242861767_242861767	0.029486	Sox2	ENSRNOT00000021185|Cbwd1|ENSRNOG00000015516|COBW domain containing 1 [Source:RGD Symbol%3BAcc:708495]
rn6_v1_chr2_-_57935334_57935363	0.0294431	Sox2	ENSRNOT00000022319|Slc1a3|ENSRNOG00000016163|solute carrier family 1 member 3 [Source:RGD Symbol%3BAcc:3698]	ENSRNOT00000085599|Slc1a3|ENSRNOG00000016163|solute carrier family 1 member 3 [Source:RGD Symbol%3BAcc:3698]	ENSRNOT00000077790|Slc1a3|ENSRNOG00000016163|solute carrier family 1 member 3 [Source:RGD Symbol%3BAcc:3698]	ENSRNOT00000035821|Slc1a3|ENSRNOG00000016163|solute carrier family 1 member 3 [Source:RGD Symbol%3BAcc:3698]
rn6_v1_chr6_+_29012207_29012207	0.0293505	Sox2	ENSRNOT00000079077|Atad2b|ENSRNOG00000058973|ATPase family%2C AAA domain containing 2B [Source:RGD Symbol%3BAcc:1566199]
rn6_v1_chr6_+_18880737_18880737	0.0293434	Sox2	ENSRNOT00000003432|Alkbh8|ENSRNOG00000024525|alkB homolog 8%2C tRNA methyltransferase [Source:RGD Symbol%3BAcc:1304687]
rn6_v1_chrX_-_158261717_158261717	0.029257	Sox2	ENSRNOT00000086804|RGD1561558|ENSRNOG00000053609|similar to RIKEN cDNA 1700001F22 [Source:RGD Symbol%3BAcc:1561558]
rn6_v1_chr3_+_137154086_137154086	0.0291522	Sox2	ENSRNOT00000034252|Otor|ENSRNOG00000028721|otoraplin [Source:RGD Symbol%3BAcc:1305253]
rn6_v1_chr19_+_25143428_25143428	0.0291457	Sox2	ENSRNOT00000007535|Palm3|ENSRNOG00000005729|paralemmin 3 [Source:RGD Symbol%3BAcc:2323602]
rn6_v1_chr14_+_8080275_8080277	0.0289728	Sox2	ENSRNOT00000065965|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]	ENSRNOT00000092542|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]
rn6_v1_chrX_+_44907521_44907521	0.0287099	Sox2	ENSRNOT00000004901|Tbl1x|ENSRNOG00000003686|transducin (beta)-like 1 X-linked [Source:RGD Symbol%3BAcc:1563868]
rn6_v1_chr17_-_53688966_53688966	0.0286243	Sox2	ENSRNOT00000078643|LOC100912163|ENSRNOG00000016391|AT-rich interactive domain-containing protein 4B-like [Source:RGD Symbol%3BAcc:6488837]
rn6_v1_chr6_-_3395954_3395954	0.0285194	Sox2	ENSRNOT00000078044|Map4k3|ENSRNOG00000007172|mitogen-activated protein kinase kinase kinase kinase 3 [Source:RGD Symbol%3BAcc:621280]
rn6_v1_chr4_-_87111025_87111025	0.0283129	Sox2	ENSRNOT00000018442|Kbtbd2|ENSRNOG00000013809|kelch repeat and BTB domain containing 2 [Source:RGD Symbol%3BAcc:1310317]
rn6_v1_chr7_+_27081667_27081667	0.0281315	Sox2	ENSRNOT00000066143|Nfyb|ENSRNOG00000010309|nuclear transcription factor Y subunit beta [Source:RGD Symbol%3BAcc:3172]
rn6_v1_chr8_-_12355091_12355091	0.0280762	Sox2	ENSRNOT00000009318|Cep57|ENSRNOG00000006792|centrosomal protein 57 [Source:RGD Symbol%3BAcc:1309884]
rn6_v1_chr2_-_142235066_142235066	0.0279282	Sox2	ENSRNOT00000018385|Cog6|ENSRNOG00000013660|component of oligomeric golgi complex 6 [Source:RGD Symbol%3BAcc:1303283]
rn6_v1_chr8_-_47529689_47529689	0.027709	Sox2	ENSRNOT00000012826|Oaf|ENSRNOG00000009243|out at first homolog [Source:RGD Symbol%3BAcc:1305890]
rn6_v1_chr8_-_80631873_80631926	0.0276651	Sox2	ENSRNOT00000091661|Unc13c|ENSRNOG00000056612|unc-13 homolog C [Source:RGD Symbol%3BAcc:628592]	ENSRNOT00000080662|Unc13c|ENSRNOG00000056612|unc-13 homolog C [Source:RGD Symbol%3BAcc:628592]
rn6_v1_chr5_-_82168347_82168427	0.0276064	Sox2	ENSRNOT00000084959|Astn2|ENSRNOG00000060105|astrotactin 2 [Source:RGD Symbol%3BAcc:2320342]	ENSRNOT00000084147|Astn2|ENSRNOG00000060105|astrotactin 2 [Source:RGD Symbol%3BAcc:2320342]
rn6_v1_chr6_-_2886465_2886465	0.0274491	Sox2	ENSRNOT00000038448|Srsf7|ENSRNOG00000027360|serine and arginine rich splicing factor 7 [Source:RGD Symbol%3BAcc:1307425]
rn6_v1_chr11_-_14741563_14741563	0.0273734	Sox2	ENSRNOT00000002152|Nrip1|ENSRNOG00000001585|nuclear receptor interacting protein 1 [Source:RGD Symbol%3BAcc:1311850]
rn6_v1_chr15_+_41799992_41799992	0.0273534	Sox2	ENSRNOT00000032631|AABR07072463.1|ENSRNOG00000021843|
rn6_v1_chrX_+_71324365_71324365	0.0268737	Sox2	ENSRNOT00000004911|Nono|ENSRNOG00000003689|non-POU domain containing%2C octamer-binding [Source:RGD Symbol%3BAcc:1549738]
rn6_v1_chr10_-_56368360_56368360	0.0267023	Sox2	ENSRNOT00000019674|Slc35g3|ENSRNOG00000014519|solute carrier family 35%2C member G3 [Source:RGD Symbol%3BAcc:1308025]
rn6_v1_chr10_+_56187679_56187679	0.0265957	Sox2	ENSRNOT00000085115|Tp53|ENSRNOG00000010756|tumor protein p53 [Source:RGD Symbol%3BAcc:3889]
rn6_v1_chr19_+_55197704_55197704	0.0265566	Sox2	ENSRNOT00000045657|Zc3h18|ENSRNOG00000028501|zinc finger CCCH-type containing 18 [Source:RGD Symbol%3BAcc:1303257]
rn6_v1_chr19_+_25029037_25029037	0.0263499	Sox2	ENSRNOT00000045699|Adgrl1|ENSRNOG00000029134|adhesion G protein-coupled receptor L1 [Source:RGD Symbol%3BAcc:620768]
rn6_v1_chr14_+_5928737_5928737	0.0261577	Sox2	ENSRNOT00000071877|Mpa2l|ENSRNOG00000002134|macrophage activation 2 like [Source:RGD Symbol%3BAcc:1561523]	ENSRNOT00000040985|Mpa2l|ENSRNOG00000002134|macrophage activation 2 like [Source:RGD Symbol%3BAcc:1561523]	ENSRNOT00000074889|Mpa2l|ENSRNOG00000002134|macrophage activation 2 like [Source:RGD Symbol%3BAcc:1561523]
rn6_v1_chr8_+_1502877_1502877	0.0260473	Sox2	ENSRNOT00000034482|Msantd4|ENSRNOG00000022245|Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:RGD Symbol%3BAcc:1565380]
rn6_v1_chr14_-_90864917_90864917	0.0260407	Sox2	ENSRNOT00000044737|LOC498414|ENSRNOG00000030665|LRRGT00197 [Source:RGD Symbol%3BAcc:1563337]
rn6_v1_chrX_+_159513800_159513800	0.0260276	Sox2	ENSRNOT00000065636|Htatsf1|ENSRNOG00000027761|HIV-1 Tat specific factor 1 [Source:RGD Symbol%3BAcc:1563377]
rn6_v1_chr11_+_34598492_34598492	0.0259301	Sox2	ENSRNOT00000065600|Ttc3|ENSRNOG00000001682|tetratricopeptide repeat domain 3 [Source:RGD Symbol%3BAcc:1308654]
rn6_v1_chr2_-_226779440_226779440	0.0258408	Sox2	ENSRNOT00000055669|Fnbp1l|ENSRNOG00000013798|formin binding protein 1-like [Source:RGD Symbol%3BAcc:1305386]
rn6_v1_chr2_-_29121104_29121104	0.0253115	Sox2	ENSRNOT00000020543|Tnpo1|ENSRNOG00000014999|transportin 1 [Source:RGD Symbol%3BAcc:1308372]
rn6_v1_chr2_+_157316266_157316266	0.0253015	Sox2	ENSRNOT00000015387|Tiparp|ENSRNOG00000011238|TCDD-inducible poly(ADP-ribose) polymerase [Source:RGD Symbol%3BAcc:1306171]
rn6_v1_chr17_-_43821536_43821536	0.0252697	Sox2	ENSRNOT00000072286|RGD1562378|ENSRNOG00000050933|histone H4 variant H4-v.1 [Source:RGD Symbol%3BAcc:1562378]
rn6_v1_chr3_-_176958880_176958880	0.0251534	Sox2	ENSRNOT00000078661|Zbtb46|ENSRNOG00000014592|zinc finger and BTB domain containing 46 [Source:RGD Symbol%3BAcc:1307408]
rn6_v1_chrX_+_44830849_44830849	0.0251203	Sox2	ENSRNOT00000079680|Tbl1x|ENSRNOG00000003686|transducin (beta)-like 1 X-linked [Source:RGD Symbol%3BAcc:1563868]
rn6_v1_chr12_+_48292273_48292273	0.0251165	Sox2	ENSRNOT00000000874|Svop|ENSRNOG00000000693|SV2 related protein [Source:RGD Symbol%3BAcc:620277]
rn6_v1_chr13_-_90405591_90405591	0.0250604	Sox2	ENSRNOT00000006849|Vangl2|ENSRNOG00000004889|VANGL planar cell polarity protein 2 [Source:RGD Symbol%3BAcc:1309442]
rn6_v1_chr6_+_8284878_8284878	0.024992	Sox2	ENSRNOT00000009581|Slc3a1|ENSRNOG00000007006|solute carrier family 3 member 1 [Source:RGD Symbol%3BAcc:3709]
rn6_v1_chr6_+_108820774_108820920	0.0248723	Sox2	ENSRNOT00000089683|Ylpm1|ENSRNOG00000027317|YLP motif containing 1 [Source:RGD Symbol%3BAcc:1564946]	ENSRNOT00000080038|Ylpm1|ENSRNOG00000027317|YLP motif containing 1 [Source:RGD Symbol%3BAcc:1564946]	ENSRNOT00000006492|Ylpm1|ENSRNOG00000027317|YLP motif containing 1 [Source:RGD Symbol%3BAcc:1564946]
rn6_v1_chr14_-_6813945_6813945	0.0247492	Sox2	ENSRNOT00000002938|Ibsp|ENSRNOG00000002158|integrin-binding sialoprotein [Source:RGD Symbol%3BAcc:2855]
rn6_v1_chr10_+_3170742_3170777	0.0246981	Sox2	ENSRNOT00000093528|Rrn3|ENSRNOG00000003326|RRN3 homolog%2C RNA polymerase I transcription factor [Source:RGD Symbol%3BAcc:1305001]	ENSRNOT00000004459|Rrn3|ENSRNOG00000003326|RRN3 homolog%2C RNA polymerase I transcription factor [Source:RGD Symbol%3BAcc:1305001]
rn6_v1_chr5_+_135354700_135354700	0.0244048	Sox2	ENSRNOT00000021850|Ipp|ENSRNOG00000016183|intracisternal A particle-promoted polypeptide [Source:RGD Symbol%3BAcc:1306299]
rn6_v1_chr2_+_159138758_159138758	0.0243257	Sox2	ENSRNOT00000087942|AABR07011152.1|ENSRNOG00000054349|
rn6_v1_chr17_-_55346279_55346279	0.0243092	Sox2	ENSRNOT00000025037|Svil|ENSRNOG00000018110|supervillin [Source:RGD Symbol%3BAcc:1306354]
rn6_v1_chr3_+_55094637_55094637	0.0242754	Sox2	ENSRNOT00000058763|Cers6|ENSRNOG00000024595|ceramide synthase 6 [Source:RGD Symbol%3BAcc:1561599]
rn6_v1_chr16_-_32868680_32868702	0.0242004	Sox2	ENSRNOT00000015974|Aadat|ENSRNOG00000011861|aminoadipate aminotransferase [Source:RGD Symbol%3BAcc:2948]	ENSRNOT00000082392|Aadat|ENSRNOG00000011861|aminoadipate aminotransferase [Source:RGD Symbol%3BAcc:2948]
rn6_v1_chr7_-_15856676_15856676	0.0241789	Sox2	ENSRNOT00000086553|AABR07055919.1|ENSRNOG00000059181|
rn6_v1_chr18_+_4084228_4084228	0.0241726	Sox2	ENSRNOT00000071392|Cabyr|ENSRNOG00000047436|calcium binding tyrosine phosphorylation regulated [Source:RGD Symbol%3BAcc:1585413]
rn6_v1_chr13_-_109663364_109663364	0.0241537	Sox2	ENSRNOT00000073327|AABR07022144.1|ENSRNOG00000046460|
rn6_v1_chr3_-_151658417_151658417	0.0239839	Sox2	ENSRNOT00000047246|LOC100910990|ENSRNOG00000019723|copine-1-like [Source:RGD Symbol%3BAcc:6495669]
rn6_v1_chr5_-_58309627_58309644	0.0239714	Sox2	ENSRNOT00000031509|Fam205c|ENSRNOG00000022751|family with sequence similarity 205%2C member C [Source:RGD Symbol%3BAcc:1561387]	ENSRNOT00000085709|Fam205c|ENSRNOG00000022751|family with sequence similarity 205%2C member C [Source:RGD Symbol%3BAcc:1561387]
rn6_v1_chr1_+_48176106_48176106	0.0238736	Sox2	ENSRNOT00000021840|Igf2r|ENSRNOG00000014997|insulin-like growth factor 2 receptor [Source:RGD Symbol%3BAcc:2871]
rn6_v1_chr3_-_3661810_3661810	0.0237278	Sox2	ENSRNOT00000025047|Lhx3|ENSRNOG00000018427|LIM homeobox 3 [Source:RGD Symbol%3BAcc:71078]
rn6_v1_chr4_-_150520774_150520774	0.0233272	Sox2	ENSRNOT00000009095|Zfp9|ENSRNOG00000006726|zinc finger protein 9 [Source:RGD Symbol%3BAcc:2293498]
rn6_v1_chr20_+_50172618_50172618	0.0233236	Sox2	ENSRNOT00000091456|Prep|ENSRNOG00000051061|prolyl endopeptidase [Source:RGD Symbol%3BAcc:620841]
rn6_v1_chr7_+_120891940_120891940	0.0233126	Sox2	ENSRNOT00000018787|Cby1|ENSRNOG00000013892|chibby family member 1%2C beta catenin antagonist [Source:RGD Symbol%3BAcc:708481]
rn6_v1_chr8_-_66893083_66893196	0.0231864	Sox2	ENSRNOT00000037028|Kif23|ENSRNOG00000014080|kinesin family member 23 [Source:RGD Symbol%3BAcc:1308596]	ENSRNOT00000091755|Kif23|ENSRNOG00000014080|kinesin family member 23 [Source:RGD Symbol%3BAcc:1308596]
rn6_v1_chr3_-_37947283_37947283	0.0231212	Sox2	ENSRNOT00000009181|Arl5a|ENSRNOG00000006839|ADP-ribosylation factor like GTPase 5A [Source:RGD Symbol%3BAcc:621327]
rn6_v1_chr16_+_74886719_74886719	0.0230899	Sox2	ENSRNOT00000089265|Atp7b|ENSRNOG00000012878|ATPase copper transporting beta [Source:RGD Symbol%3BAcc:2180]
rn6_v1_chr19_+_25391700_25391700	0.0226561	Sox2	ENSRNOT00000011163|LOC100359539|ENSRNOG00000008450|ribonucleotide reductase M2 polypeptide [Source:RGD Symbol%3BAcc:2323655]
rn6_v1_chr12_+_23514981_23514981	0.0225992	Sox2	ENSRNOT00000001937|Prkrip1|ENSRNOG00000001426|Prkr interacting protein 1 (IL11 inducible) [Source:RGD Symbol%3BAcc:1595708]
rn6_v1_chr2_+_198683159_198683159	0.0224982	Sox2	ENSRNOT00000028793|Txnip|ENSRNOG00000021201|thioredoxin interacting protein [Source:RGD Symbol%3BAcc:620886]
rn6_v1_chr7_+_14539608_14539608	0.0216751	Sox2	ENSRNOT00000093545|Cyp4f17|ENSRNOG00000062306|cytochrome P450%2C family 4%2C subfamily f%2C polypeptide 17 [Source:MGI Symbol%3BAcc:MGI:3646233]
rn6_v1_chr3_-_105214989_105214989	0.0215944	Sox2	ENSRNOT00000037895|Grem1|ENSRNOG00000026053|gremlin 1%2C DAN family BMP antagonist [Source:RGD Symbol%3BAcc:2359]
rn6_v1_chr16_-_10661528_10661528	0.0215843	Sox2	ENSRNOT00000085012|Fam35a|ENSRNOG00000059057|family with sequence similarity 35%2C member A [Source:RGD Symbol%3BAcc:1565067]
rn6_v1_chr2_-_139528162_139528162	0.021566	Sox2	ENSRNOT00000014317|Slc7a11|ENSRNOG00000010210|solute carrier family 7 member 11 [Source:RGD Symbol%3BAcc:1309275]
rn6_v1_chr15_+_55126953_55126953	0.0215442	Sox2	ENSRNOT00000021430|Lpar6|ENSRNOG00000015577|lysophosphatidic acid receptor 6 [Source:RGD Symbol%3BAcc:1595950]
rn6_v1_chr4_-_10020022_10020022	0.0214751	Sox2	ENSRNOT00000044020|Armc10|ENSRNOG00000012785|armadillo repeat containing 10 [Source:RGD Symbol%3BAcc:1305915]
rn6_v1_chr7_+_83348694_83348694	0.0213179	Sox2	ENSRNOT00000006402|Eny2|ENSRNOG00000004681|ENY2%2C transcription and export complex 2 subunit [Source:RGD Symbol%3BAcc:1596439]
rn6_v1_chr8_-_48736506_48736506	0.0213009	Sox2	ENSRNOT00000016227|Ccdc84|ENSRNOG00000012137|coiled-coil domain containing 84 [Source:RGD Symbol%3BAcc:1597440]
rn6_v1_chr1_+_23977688_23977688	0.0212701	Sox2	ENSRNOT00000014805|Tbpl1|ENSRNOG00000011114|TATA-box binding protein like 1 [Source:RGD Symbol%3BAcc:1597456]
rn6_v1_chr2_+_187915751_187915751	0.0211495	Sox2	ENSRNOT00000026994|Ubqln4|ENSRNOG00000019933|ubiquilin 4 [Source:RGD Symbol%3BAcc:1308273]
rn6_v1_chr8_+_107495366_107495366	0.0211091	Sox2	ENSRNOT00000056590|Cep70|ENSRNOG00000022845|centrosomal protein 70 [Source:RGD Symbol%3BAcc:1561486]
rn6_v1_chr14_+_86029335_86029335	0.0209957	Sox2	ENSRNOT00000017375|Dbnl|ENSRNOG00000012378|drebrin-like [Source:RGD Symbol%3BAcc:70941]
rn6_v1_chr6_-_107080524_107080524	0.0209366	Sox2	ENSRNOT00000011662|Zfyve1|ENSRNOG00000008614|zinc finger FYVE-type containing 1 [Source:RGD Symbol%3BAcc:1307795]
rn6_v1_chr8_+_64440214_64440214	0.0209213	Sox2	ENSRNOT00000058339|Parp6|ENSRNOG00000011199|poly (ADP-ribose) polymerase family%2C member 6 [Source:RGD Symbol%3BAcc:1310937]
rn6_v1_chr4_+_132137793_132137793	0.0207697	Sox2	ENSRNOT00000014455|Gpr27|ENSRNOG00000010880|G protein-coupled receptor 27 [Source:RGD Symbol%3BAcc:71067]
rn6_v1_chr2_-_195678848_195678848	0.0205543	Sox2	ENSRNOT00000028303|Oaz3|ENSRNOG00000020863|ornithine decarboxylase antizyme 3 [Source:RGD Symbol%3BAcc:1599278]	ENSRNOT00000075569|Oaz3|ENSRNOG00000020863|ornithine decarboxylase antizyme 3 [Source:RGD Symbol%3BAcc:1599278]
rn6_v1_chr2_+_53109684_53109684	0.0202169	Sox2	ENSRNOT00000086590|Selenop|ENSRNOG00000053086|selenoprotein P [Source:RGD Symbol%3BAcc:3660]
rn6_v1_chr7_+_133856101_133856101	0.0201096	Sox2	ENSRNOT00000038686|Pdzrn4|ENSRNOG00000022844|PDZ domain containing RING finger 4 [Source:RGD Symbol%3BAcc:1308860]
rn6_v1_chr10_+_104483042_104483042	0.0200367	Sox2	ENSRNOT00000007362|Sap30bp|ENSRNOG00000005482|SAP30 binding protein [Source:RGD Symbol%3BAcc:1565537]
rn6_v1_chr9_-_44419998_44419998	0.0199164	Sox2	ENSRNOT00000091397|Tsga10|ENSRNOG00000058681|testis specific 10 [Source:RGD Symbol%3BAcc:621142]	ENSRNOT00000083747|Tsga10|ENSRNOG00000058681|testis specific 10 [Source:RGD Symbol%3BAcc:621142]
rn6_v1_chr18_-_16543992_16543992	0.0198835	Sox2	ENSRNOT00000036306|Slc39a6|ENSRNOG00000028703|solute carrier family 39 member 6 [Source:RGD Symbol%3BAcc:1304664]
rn6_v1_chr4_+_160455986_160455986	0.0198529	Sox2	ENSRNOT00000087834|Tspan11|ENSRNOG00000054360|tetraspanin 11 [Source:RGD Symbol%3BAcc:1305424]
rn6_v1_chr10_+_105498728_105498728	0.0197032	Sox2	ENSRNOT00000032163|Sphk1|ENSRNOG00000010626|sphingosine kinase 1 [Source:RGD Symbol%3BAcc:620048]
rn6_v1_chr3_-_2123820_2123820	0.019648	Sox2	ENSRNOT00000086843|Ehmt1|ENSRNOG00000007242|euchromatic histone lysine methyltransferase 1 [Source:RGD Symbol%3BAcc:1307588]
rn6_v1_chr6_-_127248372_127248372	0.0194049	Sox2	ENSRNOT00000085517|Asb2|ENSRNOG00000051619|ankyrin repeat and SOCS box-containing 2 [Source:RGD Symbol%3BAcc:1306414]
rn6_v1_chr12_-_33016885_33016885	0.0193967	Sox2	ENSRNOT00000048474|Tmem132c|ENSRNOG00000000963|transmembrane protein 132C [Source:RGD Symbol%3BAcc:1583824]
rn6_v1_chr2_+_154555871_154555871	0.0193332	Sox2	ENSRNOT00000076292|Gmps|ENSRNOG00000051151|guanine monophosphate synthase [Source:RGD Symbol%3BAcc:1310063]
rn6_v1_chr10_+_89285855_89285855	0.0191702	Sox2	ENSRNOT00000028033|G6pc|ENSRNOG00000051171|glucose-6-phosphatase%2C catalytic subunit [Source:RGD Symbol%3BAcc:2644]
rn6_v1_chr4_+_99399148_99399148	0.0190484	Sox2	ENSRNOT00000088018|Rnf103|ENSRNOG00000007272|ring finger protein 103 [Source:RGD Symbol%3BAcc:620586]
rn6_v1_chr18_+_16438091_16438091	0.0190311	Sox2	ENSRNOT00000020856|MGC116121|ENSRNOG00000015546|similar to RIKEN cDNA 2700062C07 [Source:RGD Symbol%3BAcc:1564673]
rn6_v1_chr8_+_2604962_2604962	0.0189612	Sox2	ENSRNOT00000009993|Casp1|ENSRNOG00000007372|caspase 1 [Source:RGD Symbol%3BAcc:2274]
rn6_v1_chr2_-_187820952_187820952	0.0187314	Sox2	ENSRNOT00000092762|Sema4a|ENSRNOG00000019737|semaphorin 4A [Source:RGD Symbol%3BAcc:1304636]
rn6_v1_chr17_-_44640092_44640092	0.0185604	Sox2	ENSRNOT00000077628|Zfp184|ENSRNOG00000061612|zinc finger protein 184 [Source:RGD Symbol%3BAcc:1304798]
rn6_v1_chr5_-_151898022_151898022	0.0185524	Sox2	ENSRNOT00000000133|Pigv|ENSRNOG00000000121|phosphatidylinositol glycan anchor biosynthesis%2C class V [Source:RGD Symbol%3BAcc:1309526]
rn6_v1_chr20_-_32115310_32115357	0.0185057	Sox2	ENSRNOT00000067883|Vps26a|ENSRNOG00000030683|VPS26 retromer complex component A [Source:RGD Symbol%3BAcc:1359254]	ENSRNOT00000081916|Vps26a|ENSRNOG00000030683|VPS26 retromer complex component A [Source:RGD Symbol%3BAcc:1359254]
rn6_v1_chr6_+_147876557_147876557	0.0180769	Sox2	ENSRNOT00000080090|Tmem196|ENSRNOG00000037435|transmembrane protein 196 [Source:RGD Symbol%3BAcc:1562527]
rn6_v1_chr1_-_71190423_71190423	0.0179083	Sox2	ENSRNOT00000035184|Zfp78|ENSRNOG00000015322|zinc finger protein 78 [Source:RGD Symbol%3BAcc:1586242]	ENSRNOT00000035217|Zfp78|ENSRNOG00000015322|zinc finger protein 78 [Source:RGD Symbol%3BAcc:1586242]
rn6_v1_chrX_+_43183381_43183381	0.0178805	Sox2	ENSRNOT00000039874|Magea8|ENSRNOG00000048840|melanoma antigen%2C family A%2C 8 [Source:RGD Symbol%3BAcc:1565778]
rn6_v1_chr16_-_83342667_83342667	0.0177842	Sox2	ENSRNOT00000065043|Naxd|ENSRNOG00000015021|NAD(P)HX dehydratase [Source:RGD Symbol%3BAcc:1562691]
rn6_v1_chr1_+_177495782_177495782	0.0176458	Sox2	ENSRNOT00000021020|Tead1|ENSRNOG00000015488|TEA domain transcription factor 1 [Source:RGD Symbol%3BAcc:1549742]
rn6_v1_chrX_-_77293386_77293497	0.0176264	Sox2	ENSRNOT00000089640|Taf9b|ENSRNOG00000061102|TATA-box binding protein associated factor 9b [Source:RGD Symbol%3BAcc:621116]	ENSRNOT00000088077|Taf9b|ENSRNOG00000061102|TATA-box binding protein associated factor 9b [Source:RGD Symbol%3BAcc:621116]	ENSRNOT00000091234|Taf9b|ENSRNOG00000061102|TATA-box binding protein associated factor 9b [Source:RGD Symbol%3BAcc:621116]
rn6_v1_chr17_+_34665872_34665902	0.0175929	Sox2	ENSRNOT00000092101|Exoc2|ENSRNOG00000060266|exocyst complex component 2 [Source:RGD Symbol%3BAcc:619961]	ENSRNOT00000085704|Exoc2|ENSRNOG00000060266|exocyst complex component 2 [Source:RGD Symbol%3BAcc:619961]
rn6_v1_chr20_-_4817146_4817146	0.0175293	Sox2	ENSRNOT00000080174|Ddx39b|ENSRNOG00000000841|DExD-box helicase 39B [Source:RGD Symbol%3BAcc:70923]
rn6_v1_chr11_+_88131960_88131960	0.0175025	Sox2	ENSRNOT00000046664|RGD1308065|ENSRNOG00000026918|hypothetical LOC287935 [Source:RGD Symbol%3BAcc:1308065]
rn6_v1_chr3_-_51297852_51297852	0.0172611	Sox2	ENSRNOT00000001607|Cobll1|ENSRNOG00000027016|cordon-bleu WH2 repeat protein-like 1 [Source:RGD Symbol%3BAcc:1308954]
rn6_v1_chr8_+_107499262_107499262	0.0172201	Sox2	ENSRNOT00000081029|Cep70|ENSRNOG00000022845|centrosomal protein 70 [Source:RGD Symbol%3BAcc:1561486]
rn6_v1_chr7_-_136853154_136853154	0.0171725	Sox2	ENSRNOT00000087376|Nell2|ENSRNOG00000006235|neural EGFL like 2 [Source:RGD Symbol%3BAcc:620999]
rn6_v1_chr20_+_3582743_3582743	0.0168534	Sox2	ENSRNOT00000001103|Gtf2h4|ENSRNOG00000000831|general transcription factor 2H subunit 4 [Source:RGD Symbol%3BAcc:1303309]
rn6_v1_chr4_-_132111079_132111079	0.0168182	Sox2	ENSRNOT00000013719|Eif4e3|ENSRNOG00000010301|eukaryotic translation initiation factor 4E family member 3 [Source:RGD Symbol%3BAcc:1586185]
rn6_v1_chr14_+_106008086_106008086	0.0166113	Sox2	ENSRNOT00000009319|Peli1|ENSRNOG00000006329|pellino E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1311199]
rn6_v1_chr10_+_110445797_110445797	0.0164188	Sox2	ENSRNOT00000054920|Narf|ENSRNOG00000036664|nuclear prelamin A recognition factor [Source:RGD Symbol%3BAcc:1310894]
rn6_v1_chr14_+_81858737_81858743	0.0163606	Sox2	ENSRNOT00000029784|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]	ENSRNOT00000058068|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]	ENSRNOT00000058067|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]
rn6_v1_chr4_+_118207862_118207920	0.0162572	Sox2	ENSRNOT00000085787|Tia1|ENSRNOG00000016813|TIA1 cytotoxic granule-associated RNA binding protein [Source:RGD Symbol%3BAcc:1305742]	ENSRNOT00000023103|Tia1|ENSRNOG00000016813|TIA1 cytotoxic granule-associated RNA binding protein [Source:RGD Symbol%3BAcc:1305742]
rn6_v1_chr11_-_36430413_36430413	0.01624	Sox2	ENSRNOT00000002231|Brwd1|ENSRNOG00000001632|bromodomain and WD repeat domain containing 1 [Source:RGD Symbol%3BAcc:1309030]
rn6_v1_chr20_+_37876650_37876650	0.0161098	Sox2	ENSRNOT00000001054|Gja1|ENSRNOG00000000805|gap junction protein%2C alpha 1 [Source:RGD Symbol%3BAcc:2690]
rn6_v1_chr17_+_52938980_52938980	0.0159882	Sox2	ENSRNOT00000081052|Gabpb1l|ENSRNOG00000053439|GA binding protein transcription factor%2C beta subunit 1-like [Source:RGD Symbol%3BAcc:1310235]
rn6_v1_chr10_+_89236256_89236256	0.0159078	Sox2	ENSRNOT00000027957|Psme3|ENSRNOG00000051344|proteasome activator subunit 3 [Source:RGD Symbol%3BAcc:1306996]
rn6_v1_chr5_-_160174698_160174698	0.0156181	Sox2	ENSRNOT00000016176|Tmem82|ENSRNOG00000011970|transmembrane protein 82 [Source:RGD Symbol%3BAcc:1566169]
rn6_v1_chr16_-_19308842_19308842	0.0156137	Sox2	ENSRNOT00000019556|Fam32a|ENSRNOG00000039528|family with sequence similarity 32%2C member A [Source:RGD Symbol%3BAcc:1561287]
rn6_v1_chr7_-_138100841_138100841	0.0154735	Sox2	ENSRNOT00000039002|Slc38a2|ENSRNOG00000006305|solute carrier family 38%2C member 2 [Source:RGD Symbol%3BAcc:69420]
rn6_v1_chr3_+_120728688_120728688	0.0154637	Sox2	ENSRNOT00000022596|Bcl2l11|ENSRNOG00000016551|BCL2 like 11 [Source:RGD Symbol%3BAcc:628774]
rn6_v1_chr1_-_100746021_100746021	0.0154617	Sox2	ENSRNOT00000037973|Zfp473|ENSRNOG00000026572|zinc finger protein 473 [Source:RGD Symbol%3BAcc:1305084]
rn6_v1_chrX_+_14498119_14498119	0.015441	Sox2	ENSRNOT00000051135|Xk|ENSRNOG00000003749|X-linked Kx blood group [Source:RGD Symbol%3BAcc:1359650]
rn6_v1_chr7_+_12652415_12652415	0.0154259	Sox2	ENSRNOT00000031315|Plppr3|ENSRNOG00000027940|phospholipid phosphatase related 3 [Source:RGD Symbol%3BAcc:727823]
rn6_v1_chr10_-_56511583_56511583	0.0151809	Sox2	ENSRNOT00000021402|LOC497940|ENSRNOG00000015975|similar to RIKEN cDNA 2810408A11 [Source:RGD Symbol%3BAcc:1563007]
rn6_v1_chr11_+_42936028_42936028	0.0148323	Sox2	ENSRNOT00000074653|AABR07033887.1|ENSRNOG00000045728|
rn6_v1_chr11_+_28692708_28692708	0.0147948	Sox2	ENSRNOT00000002135|Krtap13-1|ENSRNOG00000042531|keratin associated protein 13-1 [Source:RGD Symbol%3BAcc:2323555]
rn6_v1_chr3_+_21764377_21764377	0.0147236	Sox2	ENSRNOT00000063938|Gpr21|ENSRNOG00000042269|G protein-coupled receptor 21 [Source:RGD Symbol%3BAcc:1586383]
rn6_v1_chr10_-_59360661_59360661	0.0146584	Sox2	ENSRNOT00000036942|Cyb5d2|ENSRNOG00000024553|cytochrome b5 domain containing 2 [Source:RGD Symbol%3BAcc:1359124]
rn6_v1_chr18_-_6782757_6782757	0.0146384	Sox2	ENSRNOT00000068150|Aqp4|ENSRNOG00000016043|aquaporin 4 [Source:RGD Symbol%3BAcc:2143]
rn6_v1_chr3_-_46153371_46153371	0.0145893	Sox2	ENSRNOT00000085885|Baz2b|ENSRNOG00000056984|bromodomain adjacent to zinc finger domain%2C 2B [Source:RGD Symbol%3BAcc:1309801]
rn6_v1_chr6_-_67084234_67084234	0.0145025	Sox2	ENSRNOT00000050372|Nova1|ENSRNOG00000031440|NOVA alternative splicing regulator 1 [Source:RGD Symbol%3BAcc:621345]
rn6_v1_chr5_-_711033_711033	0.014332	Sox2	ENSRNOT00000024199|Crispld1|ENSRNOG00000017773|cysteine-rich secretory protein LCCL domain containing 1 [Source:RGD Symbol%3BAcc:1564813]
rn6_v1_chr10_-_85974644_85974651	0.0142273	Sox2	ENSRNOT00000006098|Cacnb1|ENSRNOG00000004518|calcium voltage-gated channel auxiliary subunit beta 1 [Source:RGD Symbol%3BAcc:68382]	ENSRNOT00000082974|Cacnb1|ENSRNOG00000004518|calcium voltage-gated channel auxiliary subunit beta 1 [Source:RGD Symbol%3BAcc:68382]
rn6_v1_chr5_+_146933592_146933592	0.0142011	Sox2	ENSRNOT00000007851|A3galt2|ENSRNOG00000005935|alpha 1%2C3-galactosyltransferase 2 [Source:RGD Symbol%3BAcc:727913]
rn6_v1_chr14_-_34172893_34172893	0.0139837	Sox2	ENSRNOT00000090470|Exoc1|ENSRNOG00000002144|exocyst complex component 1 [Source:RGD Symbol%3BAcc:1304939]
rn6_v1_chr1_-_133503194_133503194	0.0139579	Sox2	ENSRNOT00000077049|Mctp2|ENSRNOG00000009932|multiple C2 and transmembrane domain containing 2 [Source:RGD Symbol%3BAcc:1562967]
rn6_v1_chr20_+_47494424_47494424	0.0138672	Sox2	ENSRNOT00000087718|Sec63|ENSRNOG00000000314|SEC63 homolog%2C protein translocation regulator [Source:RGD Symbol%3BAcc:1304984]
rn6_v1_chr3_+_123031307_123031307	0.0136501	Sox2	ENSRNOT00000080379|Ptpra|ENSRNOG00000021223|protein tyrosine phosphatase%2C receptor type%2C A [Source:RGD Symbol%3BAcc:3450]
rn6_v1_chr1_+_225140863_225140863	0.0135798	Sox2	ENSRNOT00000027141|Mta2|ENSRNOG00000019913|metastasis associated 1 family%2C member 2 [Source:RGD Symbol%3BAcc:1306743]
rn6_v1_chrX_+_144445795_144445795	0.0134299	Sox2	ENSRNOT00000048467|RGD1561327|ENSRNOG00000031222|similar to melanoma antigen family A%2C 10 [Source:RGD Symbol%3BAcc:1561327]
rn6_v1_chr12_-_48238887_48238887	0.0133174	Sox2	ENSRNOT00000078868|Acacb|ENSRNOG00000000658|acetyl-CoA carboxylase beta [Source:RGD Symbol%3BAcc:620500]
rn6_v1_chr17_-_45285060_45285060	0.0131483	Sox2	ENSRNOT00000086879|Zscan12|ENSRNOG00000052959|zinc finger and SCAN domain containing 12 [Source:RGD Symbol%3BAcc:628738]
rn6_v1_chr5_-_159962676_159962676	0.0130629	Sox2	ENSRNOT00000013550|Clcnkb|ENSRNOG00000009897|chloride voltage-gated channel Kb [Source:RGD Symbol%3BAcc:628639]
rn6_v1_chr3_+_121499195_121499195	0.0130354	Sox2	ENSRNOT00000024322|Zc3h6|ENSRNOG00000026277|zinc finger CCCH type containing 6 [Source:RGD Symbol%3BAcc:1311061]
rn6_v1_chr6_-_107658741_107658741	0.012988	Sox2	ENSRNOT00000088712|Elmsan1|ENSRNOG00000010653|ELM2 and Myb/SANT domain containing 1 [Source:RGD Symbol%3BAcc:1306119]
rn6_v1_chr3_+_56766475_56766475	0.0129602	Sox2	ENSRNOT00000078819|Sp5|ENSRNOG00000054086|Sp5 transcription factor [Source:RGD Symbol%3BAcc:1308499]
rn6_v1_chr1_+_100447998_100447998	0.0128646	Sox2	ENSRNOT00000026259|Lrrc4b|ENSRNOG00000019418|leucine rich repeat containing 4B [Source:RGD Symbol%3BAcc:1307121]
rn6_v1_chr1_+_87045796_87045796	0.0128086	Sox2	ENSRNOT00000027620|Lgals7|ENSRNOG00000020380|galectin 7 [Source:RGD Symbol%3BAcc:61951]
rn6_v1_chr1_-_198839228_198839228	0.0127524	Sox2	ENSRNOT00000052100|LOC102553866|ENSRNOG00000031003|zinc finger protein 764-like [Source:RGD Symbol%3BAcc:7540019]
rn6_v1_chr13_-_34251650_34251650	0.0127126	Sox2	ENSRNOT00000068524|Tsn|ENSRNOG00000002319|translin [Source:RGD Symbol%3BAcc:621107]
rn6_v1_chr11_-_27094364_27094364	0.0126857	Sox2	ENSRNOT00000050902|Rwdd2b|ENSRNOG00000001599|RWD domain containing 2B [Source:RGD Symbol%3BAcc:1305062]
rn6_v1_chr3_-_148722710_148722742	0.0126671	Sox2	ENSRNOT00000090919|Plagl2|ENSRNOG00000010086|PLAG1 like zinc finger 2 [Source:RGD Symbol%3BAcc:1307999]	ENSRNOT00000068592|Plagl2|ENSRNOG00000010086|PLAG1 like zinc finger 2 [Source:RGD Symbol%3BAcc:1307999]
rn6_v1_chr3_+_72134731_72134731	0.0126403	Sox2	ENSRNOT00000083592|Ypel4|ENSRNOG00000060130|yippee-like 4 [Source:RGD Symbol%3BAcc:1560142]
rn6_v1_chr11_+_57108956_57108956	0.0126115	Sox2	ENSRNOT00000035485|Cd96|ENSRNOG00000023030|CD96 molecule [Source:RGD Symbol%3BAcc:1565249]
rn6_v1_chr12_+_7454884_7454884	0.0125262	Sox2	ENSRNOT00000077328|LOC100910196|ENSRNOG00000047618|katanin p60 ATPase-containing subunit A-like 1-like [Source:RGD Symbol%3BAcc:6499844]
rn6_v1_chr1_-_75154325_75154325	0.0124956	Sox2	ENSRNOT00000074520|RGD1564801|ENSRNOG00000048095|similar to hepatic multiple inositol polyphosphate phosphatase [Source:RGD Symbol%3BAcc:1564801]
rn6_v1_chr5_-_173312023_173312023	0.0124501	Sox2	ENSRNOT00000026671|Tas1r3|ENSRNOG00000019589|taste 1 receptor member 3 [Source:RGD Symbol%3BAcc:620539]
rn6_v1_chr16_-_32227491_32227491	0.0118639	Sox2	ENSRNOT00000013816|Sh3rf1|ENSRNOG00000010358|SH3 domain containing ring finger 1 [Source:RGD Symbol%3BAcc:735154]
rn6_v1_chr1_+_75356220_75356220	0.0118027	Sox2	ENSRNOT00000019799|Lig1|ENSRNOG00000014193|DNA ligase 1 [Source:RGD Symbol%3BAcc:621424]
rn6_v1_chr1_+_225151404_225151404	0.0115187	Sox2	ENSRNOT00000027187|Tut1|ENSRNOG00000020047|terminal uridylyl transferase 1%2C U6 snRNA-specific [Source:RGD Symbol%3BAcc:1561043]
rn6_v1_chr18_+_3900714_3900714	0.011501	Sox2	ENSRNOT00000092814|Lama3|ENSRNOG00000011300|laminin subunit alpha 3 [Source:RGD Symbol%3BAcc:628776]
rn6_v1_chrX_+_6273733_6273733	0.0114919	Sox2	ENSRNOT00000074275|Ndp|ENSRNOG00000046042|NDP%2C norrin cystine knot growth factor [Source:RGD Symbol%3BAcc:1563968]
rn6_v1_chr4_+_115416580_115416580	0.0113819	Sox2	ENSRNOT00000018303|Atp6v1b1|ENSRNOG00000013573|ATPase H+ transporting V1 subunit B1 [Source:RGD Symbol%3BAcc:1310619]
rn6_v1_chr10_-_34990943_34990943	0.0113494	Sox2	ENSRNOT00000075555|Rmnd5b|ENSRNOG00000047396|required for meiotic nuclear division 5 homolog B [Source:RGD Symbol%3BAcc:1559511]
rn6_v1_chr14_-_44845218_44845218	0.01126	Sox2	ENSRNOT00000004003|Klhl5|ENSRNOG00000008421|kelch-like family member 5 [Source:RGD Symbol%3BAcc:1309661]
rn6_v1_chr15_+_33074441_33074441	0.0112275	Sox2	ENSRNOT00000075610|Mmp14|ENSRNOG00000010947|matrix metallopeptidase 14 [Source:RGD Symbol%3BAcc:620198]
rn6_v1_chr1_+_229642412_229642412	0.0111051	Sox2	ENSRNOT00000017109|Lpxn|ENSRNOG00000012611|leupaxin [Source:RGD Symbol%3BAcc:1304981]
rn6_v1_chr3_+_8643936_8643936	0.0110737	Sox2	ENSRNOT00000077797|Set|ENSRNOG00000025892|SET nuclear proto-oncogene [Source:RGD Symbol%3BAcc:1307467]
rn6_v1_chr3_+_160047296_160047296	0.0110695	Sox2	ENSRNOT00000051590|Pkig|ENSRNOG00000010235|cAMP-dependent protein kinase inhibitor gamma [Source:RGD Symbol%3BAcc:628775]
rn6_v1_chr18_-_3676188_3676188	0.0110239	Sox2	ENSRNOT00000073811|Ankrd29|ENSRNOG00000046744|ankyrin repeat domain 29 [Source:RGD Symbol%3BAcc:1587260]
rn6_v1_chr10_+_97771264_97771264	0.0109577	Sox2	ENSRNOT00000005257|Arsg|ENSRNOG00000003931|arylsulfatase G [Source:RGD Symbol%3BAcc:1306571]
rn6_v1_chr12_+_13715843_13715843	0.0109038	Sox2	ENSRNOT00000042459|Actb|ENSRNOG00000034254|actin%2C beta [Source:RGD Symbol%3BAcc:628837]
rn6_v1_chr5_-_100970043_100970043	0.0106226	Sox2	ENSRNOT00000013950|Zdhhc21|ENSRNOG00000010484|zinc finger%2C DHHC-type containing 21 [Source:RGD Symbol%3BAcc:1305750]
rn6_v1_chr2_-_208152179_208152179	0.0105183	Sox2	ENSRNOT00000068152|Ddx20|ENSRNOG00000015274|DEAD-box helicase 20 [Source:RGD Symbol%3BAcc:621744]
rn6_v1_chr2_+_18354542_18354542	0.0104637	Sox2	ENSRNOT00000042958|Hapln1|ENSRNOG00000032002|hyaluronan and proteoglycan link protein 1 [Source:RGD Symbol%3BAcc:2412]
rn6_v1_chr6_+_59757397_59757397	0.0103566	Sox2	ENSRNOT00000047001|AABR07064000.1|ENSRNOG00000029594|
rn6_v1_chr4_-_164051812_164051812	0.0103263	Sox2	ENSRNOT00000085719|AABR07062183.1|ENSRNOG00000058993|
rn6_v1_chr14_-_2700977_2700977	0.0103256	Sox2	ENSRNOT00000000086|Mtf2|ENSRNOG00000000075|metal response element binding transcription factor 2 [Source:RGD Symbol%3BAcc:1304727]
rn6_v1_chr4_-_170092848_170092848	0.010315	Sox2	ENSRNOT00000072147|Hist2h4|ENSRNOG00000048735|histone cluster 2%2C H4 [Source:RGD Symbol%3BAcc:1307448]
rn6_v1_chr14_-_5101177_5101177	0.0102798	Sox2	ENSRNOT00000002888|Lrrc8d|ENSRNOG00000002121|leucine rich repeat containing 8 family%2C member D [Source:RGD Symbol%3BAcc:1309601]
rn6_v1_chr3_-_163986054_163986059	0.01021	Sox2	ENSRNOT00000082474|Ptgis|ENSRNOG00000008245|prostaglandin I2 synthase [Source:RGD Symbol%3BAcc:3438]	ENSRNOT00000010891|Ptgis|ENSRNOG00000008245|prostaglandin I2 synthase [Source:RGD Symbol%3BAcc:3438]
rn6_v1_chr10_-_95434688_95434688	0.0101197	Sox2	ENSRNOT00000074809|AABR07030603.1|ENSRNOG00000050188|
rn6_v1_chr16_+_7103998_7103998	0.0100071	Sox2	ENSRNOT00000016581|Pbrm1|ENSRNOG00000028227|polybromo 1 [Source:RGD Symbol%3BAcc:1565549]
rn6_v1_chr12_-_5682608_5682608	0.00998933	Sox2	ENSRNOT00000076483|Fry|ENSRNOG00000000894|FRY microtubule binding protein [Source:RGD Symbol%3BAcc:1307034]
rn6_v1_chr20_-_6960481_6960481	0.00996359	Sox2	ENSRNOT00000093172|Mtch1|ENSRNOG00000000527|mitochondrial carrier 1 [Source:RGD Symbol%3BAcc:1309262]
rn6_v1_chrX_-_78911601_78911601	0.00958607	Sox2	ENSRNOT00000003188|RGD1566265|ENSRNOG00000002323|similar to RIKEN cDNA 2610002M06 [Source:RGD Symbol%3BAcc:1566265]
rn6_v1_chr17_+_36335804_36335804	0.00956028	Sox2	ENSRNOT00000091334|E2f3|ENSRNOG00000029273|E2F transcription factor 3 [Source:RGD Symbol%3BAcc:1561600]
rn6_v1_chr2_+_198965685_198965711	0.00939304	Sox2	ENSRNOT00000000107|Pdzk1|ENSRNOG00000000096|PDZ domain containing 1 [Source:RGD Symbol%3BAcc:70924]	ENSRNOT00000091578|Pdzk1|ENSRNOG00000000096|PDZ domain containing 1 [Source:RGD Symbol%3BAcc:70924]
rn6_v1_chr11_-_65845418_65845418	0.00938679	Sox2	ENSRNOT00000091057|Fstl1|ENSRNOG00000002746|follistatin-like 1 [Source:RGD Symbol%3BAcc:68955]
rn6_v1_chr1_+_221735517_221735528	0.00935101	Sox2	ENSRNOT00000028628|Sf1|ENSRNOG00000021085|splicing factor 1 [Source:RGD Symbol%3BAcc:620645]	ENSRNOT00000044866|Sf1|ENSRNOG00000021085|splicing factor 1 [Source:RGD Symbol%3BAcc:620645]
rn6_v1_chr6_-_98606109_98606109	0.00906411	Sox2	ENSRNOT00000006860|Wdr89|ENSRNOG00000021628|WD repeat domain 89 [Source:RGD Symbol%3BAcc:1307393]
rn6_v1_chr10_-_15155412_15155412	0.00904743	Sox2	ENSRNOT00000026536|Haghl|ENSRNOG00000019612|hydroxyacylglutathione hydrolase-like [Source:RGD Symbol%3BAcc:1308042]
rn6_v1_chr20_-_2210033_2210033	0.00899242	Sox2	ENSRNOT00000084596|Trim26|ENSRNOG00000032930|tripartite motif-containing 26 [Source:RGD Symbol%3BAcc:1359126]
rn6_v1_chr2_-_181102918_181102918	0.00888448	Sox2	ENSRNOT00000017190|Gucy1a3|ENSRNOG00000012302|guanylate cyclase 1 soluble subunit alpha 3 [Source:RGD Symbol%3BAcc:68436]
rn6_v1_chr7_-_15821927_15821927	0.00857069	Sox2	ENSRNOT00000050658|LOC691422|ENSRNOG00000033056|similar to zinc finger protein 101 [Source:RGD Symbol%3BAcc:1583951]
rn6_v1_chr10_-_94384339_94384339	0.00849632	Sox2	ENSRNOT00000055125|Strada|ENSRNOG00000008637|STE20-related kinase adaptor alpha [Source:RGD Symbol%3BAcc:727905]
rn6_v1_chr7_+_70349863_70349863	0.00847371	Sox2	ENSRNOT00000031796|Cdk4|ENSRNOG00000025602|cyclin-dependent kinase 4 [Source:RGD Symbol%3BAcc:621120]
rn6_v1_chr7_-_122967178_122967178	0.00838723	Sox2	ENSRNOT00000052098|Rangap1|ENSRNOG00000031789|RAN GTPase activating protein 1 [Source:RGD Symbol%3BAcc:1310380]
rn6_v1_chr3_+_61658245_61658245	0.008334	Sox2	ENSRNOT00000033511|Hoxd3|ENSRNOG00000001577|homeo box D3 [Source:RGD Symbol%3BAcc:1588601]
rn6_v1_chr5_+_25349928_25349928	0.00831984	Sox2	ENSRNOT00000020826|Gem|ENSRNOG00000015160|GTP binding protein overexpressed in skeletal muscle [Source:RGD Symbol%3BAcc:1307386]
rn6_v1_chr1_+_164502389_164502389	0.00816383	Sox2	ENSRNOT00000043554|Arrb1|ENSRNOG00000030404|arrestin%2C beta 1 [Source:RGD Symbol%3BAcc:2156]
rn6_v1_chr6_+_107428508_107428508	0.00807286	Sox2	ENSRNOT00000013431|RGD1307704|ENSRNOG00000010126|similar to RIKEN cDNA 2410016O06 [Source:RGD Symbol%3BAcc:1307704]
rn6_v1_chr11_+_77644541_77644541	0.00797199	Sox2	ENSRNOT00000074688|Tmem207|ENSRNOG00000048672|transmembrane protein 207 [Source:RGD Symbol%3BAcc:2322856]
rn6_v1_chr18_+_79326738_79326738	0.00783143	Sox2	ENSRNOT00000089879|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]
rn6_v1_chr10_+_31146107_31146107	0.00772244	Sox2	ENSRNOT00000008184|Adam19|ENSRNOG00000042980|ADAM metallopeptidase domain 19 [Source:RGD Symbol%3BAcc:1585017]
rn6_v1_chr1_+_254697247_254697247	0.00769059	Sox2	ENSRNOT00000025412|Rpp30|ENSRNOG00000018718|ribonuclease P/MRP subunit p30 [Source:RGD Symbol%3BAcc:1595116]
rn6_v1_chr18_+_3317724_3317724	0.00766764	Sox2	ENSRNOT00000017187|Cables1|ENSRNOG00000012795|Cdk5 and Abl enzyme substrate 1 [Source:RGD Symbol%3BAcc:1305516]
rn6_v1_chr20_-_32416044_32416044	0.00761594	Sox2	ENSRNOT00000067004|Ccar1|ENSRNOG00000000397|cell division cycle and apoptosis regulator 1 [Source:RGD Symbol%3BAcc:1560358]
rn6_v1_chr14_-_66978499_66978499	0.00755792	Sox2	ENSRNOT00000081601|Slit2|ENSRNOG00000003840|slit guidance ligand 2 [Source:RGD Symbol%3BAcc:69310]
rn6_v1_chr1_+_219329574_219329574	0.0074528	Sox2	ENSRNOT00000071109|Cabp2|ENSRNOG00000018339|calcium binding protein 2 [Source:RGD Symbol%3BAcc:1563670]
rn6_v1_chr9_+_52023295_52023295	0.00727822	Sox2	ENSRNOT00000004956|Col3a1|ENSRNOG00000003357|collagen type III alpha 1 chain [Source:RGD Symbol%3BAcc:71029]
rn6_v1_chr3_+_69549673_69549673	0.00716867	Sox2	ENSRNOT00000043974|Zfp804a|ENSRNOG00000038004|zinc finger protein 804A [Source:RGD Symbol%3BAcc:1305239]
rn6_v1_chr5_+_137356801_137356801	0.00711654	Sox2	ENSRNOT00000027432|RGD1305347|ENSRNOG00000020259|similar to RIKEN cDNA 2610528J11 [Source:RGD Symbol%3BAcc:1305347]
rn6_v1_chr4_-_64330996_64330996	0.00710719	Sox2	ENSRNOT00000016088|Ptn|ENSRNOG00000011946|pleiotrophin [Source:RGD Symbol%3BAcc:3444]
rn6_v1_chr1_+_157573324_157573324	0.00687597	Sox2	ENSRNOT00000092066|Rab30|ENSRNOG00000010224|RAB30%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:1309507]
rn6_v1_chr5_+_173288447_173288568	0.00683069	Sox2	ENSRNOT00000091205|Mxra8|ENSRNOG00000019244|matrix remodeling associated 8 [Source:RGD Symbol%3BAcc:1359356]	ENSRNOT00000067252|Mxra8|ENSRNOG00000019244|matrix remodeling associated 8 [Source:RGD Symbol%3BAcc:1359356]
rn6_v1_chr10_+_72147816_72147816	0.00681189	Sox2	ENSRNOT00000090085|LOC102553386|ENSRNOG00000053557|SUMO-conjugating enzyme UBC9-like [Source:RGD Symbol%3BAcc:7518044]
rn6_v1_chr18_-_58097316_58097316	0.00679761	Sox2	ENSRNOT00000088527|AABR07032265.1|ENSRNOG00000059754|
rn6_v1_chr16_-_74072541_74072541	0.00668869	Sox2	ENSRNOT00000089722|AABR07026361.2|ENSRNOG00000054572|
rn6_v1_chr3_+_55960067_55960067	0.00654114	Sox2	ENSRNOT00000010216|Ppig|ENSRNOG00000007673|peptidylprolyl isomerase G [Source:RGD Symbol%3BAcc:620315]
rn6_v1_chr1_-_189182306_189182306	0.00650631	Sox2	ENSRNOT00000021249|Gp2|ENSRNOG00000015716|glycoprotein 2 [Source:RGD Symbol%3BAcc:621695]
rn6_v1_chr3_-_3434027_3434027	0.00636362	Sox2	ENSRNOT00000024163|Camsap1|ENSRNOG00000017883|calmodulin regulated spectrin-associated protein 1 [Source:RGD Symbol%3BAcc:1565022]
rn6_v1_chr12_+_25173005_25173135	0.00632143	Sox2	ENSRNOT00000033200|Clip2|ENSRNOG00000021611|CAP-GLY domain containing linker protein 2 [Source:RGD Symbol%3BAcc:62019]	ENSRNOT00000091328|Clip2|ENSRNOG00000021611|CAP-GLY domain containing linker protein 2 [Source:RGD Symbol%3BAcc:62019]
rn6_v1_chr10_+_92289107_92289107	0.00618312	Sox2	ENSRNOT00000050070|Mapt|ENSRNOG00000005133|microtubule-associated protein tau [Source:RGD Symbol%3BAcc:69329]
rn6_v1_chr10_-_37084637_37084637	0.00614029	Sox2	ENSRNOT00000075525|LOC103689927|ENSRNOG00000047719|protein RMD5 homolog B [Source:RGD Symbol%3BAcc:9131446]
rn6_v1_chr1_-_72468738_72468738	0.00592669	Sox2	ENSRNOT00000029136|Zfp628|ENSRNOG00000038622|zinc finger protein 628 [Source:RGD Symbol%3BAcc:2323809]
rn6_v1_chr13_+_99473044_99473044	0.00587154	Sox2	ENSRNOT00000004939|Cnih4|ENSRNOG00000003717|cornichon family AMPA receptor auxiliary protein 4 [Source:RGD Symbol%3BAcc:1559740]
rn6_v1_chr20_+_10032641_10032641	0.00576159	Sox2	ENSRNOT00000001544|Slc37a1|ENSRNOG00000001169|solute carrier family 37 member 1 [Source:RGD Symbol%3BAcc:1308587]
rn6_v1_chr15_+_62520953_62520953	0.00572853	Sox2	ENSRNOT00000040851|LOC306079|ENSRNOG00000031061|similar to RIKEN cDNA 3100001N19 [Source:RGD Symbol%3BAcc:1564564]
rn6_v1_chr8_+_107508351_107508351	0.00570935	Sox2	ENSRNOT00000081594|Cep70|ENSRNOG00000022845|centrosomal protein 70 [Source:RGD Symbol%3BAcc:1561486]
rn6_v1_chr7_-_15852930_15852930	0.00565085	Sox2	ENSRNOT00000009270|LOC691422|ENSRNOG00000007076|similar to zinc finger protein 101 [Source:RGD Symbol%3BAcc:1583951]
rn6_v1_chr16_+_73584521_73584521	0.00559392	Sox2	ENSRNOT00000024301|Gins4|ENSRNOG00000018040|GINS complex subunit 4 [Source:RGD Symbol%3BAcc:1307397]
rn6_v1_chr7_-_140417530_140417530	0.00548906	Sox2	ENSRNOT00000077884|Fkbp11|ENSRNOG00000054775|FK506 binding protein 11 [Source:RGD Symbol%3BAcc:1306161]
rn6_v1_chr5_-_128186532_128186532	0.00546604	Sox2	ENSRNOT00000012635|Prpf38a|ENSRNOG00000009451|pre-mRNA processing factor 38A [Source:RGD Symbol%3BAcc:1311129]
rn6_v1_chr15_-_33051129_33051129	0.00543223	Sox2	ENSRNOT00000014391|Slc7a7|ENSRNOG00000010296|solute carrier family 7 member 7 [Source:RGD Symbol%3BAcc:619902]
rn6_v1_chr5_+_148923098_148923098	0.00541657	Sox2	ENSRNOT00000048781|Sdc3|ENSRNOG00000011927|syndecan 3 [Source:RGD Symbol%3BAcc:621486]
rn6_v1_chr20_+_48552289_48552289	0.0053074	Sox2	ENSRNOT00000077926|Cdc40|ENSRNOG00000000581|cell division cycle 40 [Source:RGD Symbol%3BAcc:1307063]
rn6_v1_chr16_-_81587076_81587080	0.00500217	Sox2	ENSRNOT00000092470|LOC103693999|ENSRNOG00000019346|transmembrane and coiled-coil domain-containing protein 3 [Source:RGD Symbol%3BAcc:9333008]	ENSRNOT00000092721|LOC103693999|ENSRNOG00000019346|transmembrane and coiled-coil domain-containing protein 3 [Source:RGD Symbol%3BAcc:9333008]
rn6_v1_chr2_-_102919567_102919567	0.004274	Sox2	ENSRNOT00000072162|LOC100361143|ENSRNOG00000059302|ribosomal protein L30-like [Source:RGD Symbol%3BAcc:2320718]
rn6_v1_chr9_-_121725716_121725716	0.00421918	Sox2	ENSRNOT00000087405|Adcyap1|ENSRNOG00000049882|adenylate cyclase activating polypeptide 1 [Source:RGD Symbol%3BAcc:2037]
rn6_v1_chr10_-_47164596_47164596	0.00408021	Sox2	ENSRNOT00000075751|LOC100911674|ENSRNOG00000050567|protein GTLF3B-like [Source:RGD Symbol%3BAcc:6491771]
rn6_v1_chr4_+_68849033_68849033	0.00399549	Sox2	ENSRNOT00000016912|Mgam|ENSRNOG00000026177|maltase-glucoamylase [Source:MGI Symbol%3BAcc:MGI:1203495]
rn6_v1_chr10_+_43633035_43633035	0.00380509	Sox2	ENSRNOT00000077764|Igtp|ENSRNOG00000027008|interferon gamma induced GTPase [Source:RGD Symbol%3BAcc:1306896]
rn6_v1_chr18_-_64084556_64084556	0.00374415	Sox2	ENSRNOT00000084902|Fam210a|ENSRNOG00000016740|family with sequence similarity 210%2C member A [Source:RGD Symbol%3BAcc:1359600]
rn6_v1_chr10_+_56187020_56187020	0.00370454	Sox2	ENSRNOT00000046490|Tp53|ENSRNOG00000010756|tumor protein p53 [Source:RGD Symbol%3BAcc:3889]
rn6_v1_chr8_-_132189388_132189388	0.00360987	Sox2	ENSRNOT00000005817|Zdhhc3|ENSRNOG00000004344|zinc finger%2C DHHC-type containing 3 [Source:RGD Symbol%3BAcc:1309041]
rn6_v1_chr16_-_71125316_71125316	0.00358007	Sox2	ENSRNOT00000020900|Plpp5|ENSRNOG00000015568|phospholipid phosphatase 5 [Source:RGD Symbol%3BAcc:1591734]
rn6_v1_chr3_+_86621205_86621205	0.00356788	Sox2	ENSRNOT00000044595|Lrrc4c|ENSRNOG00000029798|leucine rich repeat containing 4C [Source:RGD Symbol%3BAcc:1311013]
rn6_v1_chr5_-_78378633_78378633	0.0034939	Sox2	ENSRNOT00000076837|Alad|ENSRNOG00000015206|aminolevulinate dehydratase [Source:RGD Symbol%3BAcc:2083]
rn6_v1_chr3_-_118137125_118137191	0.00306894	Sox2	ENSRNOT00000012287|Cops2|ENSRNOG00000008744|COP9 signalosome subunit 2 [Source:RGD Symbol%3BAcc:628791]	ENSRNOT00000084154|Cops2|ENSRNOG00000008744|COP9 signalosome subunit 2 [Source:RGD Symbol%3BAcc:628791]
rn6_v1_chr5_+_159993799_159993799	0.00305264	Sox2	ENSRNOT00000014399|Zbtb17|ENSRNOG00000010436|zinc finger and BTB domain containing 17 [Source:RGD Symbol%3BAcc:1307143]
rn6_v1_chr9_+_111028575_111028575	0.00289411	Sox2	ENSRNOT00000043451|Pam|ENSRNOG00000033280|peptidylglycine alpha-amidating monooxygenase [Source:RGD Symbol%3BAcc:3252]
rn6_v1_chr2_-_188736462_188736462	0.00286132	Sox2	ENSRNOT00000028030|Flad1|ENSRNOG00000020642|flavin adenine dinucleotide synthetase 1 [Source:RGD Symbol%3BAcc:1593292]
rn6_v1_chr8_+_97537968_97537968	0.00285921	Sox2	ENSRNOT00000037276|Adamts7|ENSRNOG00000028036|ADAM metallopeptidase with thrombospondin type 1 motif%2C 7 [Source:RGD Symbol%3BAcc:1306713]
rn6_v1_chr10_+_43871613_43871682	0.00285209	Sox2	ENSRNOT00000080540|LOC24906|ENSRNOG00000002820|RoBo-1 [Source:RGD Symbol%3BAcc:3683]	ENSRNOT00000003797|LOC24906|ENSRNOG00000002820|RoBo-1 [Source:RGD Symbol%3BAcc:3683]
rn6_v1_chr6_+_132510757_132510757	0.00282494	Sox2	ENSRNOT00000080230|Evl|ENSRNOG00000014476|Enah/Vasp-like [Source:RGD Symbol%3BAcc:621150]
rn6_v1_chr5_+_119097715_119097715	0.00270542	Sox2	ENSRNOT00000045987|Ror1|ENSRNOG00000029449|receptor tyrosine kinase-like orphan receptor 1 [Source:RGD Symbol%3BAcc:1559469]
rn6_v1_chr17_+_21382455_21382455	0.0026827	Sox2	ENSRNOT00000019756|Elovl2|ENSRNOG00000014702|ELOVL fatty acid elongase 2 [Source:RGD Symbol%3BAcc:1308605]
rn6_v1_chr2_-_198120041_198120120	0.00264306	Sox2	ENSRNOT00000079621|Plekho1|ENSRNOG00000021170|pleckstrin homology domain containing O1 [Source:RGD Symbol%3BAcc:1311487]	ENSRNOT00000028747|Plekho1|ENSRNOG00000021170|pleckstrin homology domain containing O1 [Source:RGD Symbol%3BAcc:1311487]
rn6_v1_chr2_+_257568613_257568613	0.00258826	Sox2	ENSRNOT00000066125|Usp33|ENSRNOG00000011294|ubiquitin specific peptidase 33 [Source:RGD Symbol%3BAcc:1307848]
rn6_v1_chr4_+_153805993_153805993	0.00229901	Sox2	ENSRNOT00000056174|Usp18|ENSRNOG00000037198|ubiquitin specific peptidase 18 [Source:RGD Symbol%3BAcc:1359153]
rn6_v1_chr1_-_170404056_170404056	0.00221451	Sox2	ENSRNOT00000024402|Apbb1|ENSRNOG00000018020|amyloid beta precursor protein binding family B member 1 [Source:RGD Symbol%3BAcc:2122]
rn6_v1_chr1_+_98440186_98440186	0.00215402	Sox2	ENSRNOT00000024150|Iglon5|ENSRNOG00000017918|IgLON family member 5 [Source:RGD Symbol%3BAcc:1305344]
rn6_v1_chr1_+_264059374_264059374	0.00190535	Sox2	ENSRNOT00000075397|Scd2|ENSRNOG00000046005|stearoyl-Coenzyme A desaturase 2 [Source:RGD Symbol%3BAcc:621177]
rn6_v1_chr19_-_27535792_27535792	0.00189836	Sox2	ENSRNOT00000024040|Olr1666|ENSRNOG00000017868|olfactory receptor 1666 [Source:RGD Symbol%3BAcc:1333226]
rn6_v1_chr3_-_147481073_147481073	0.00184878	Sox2	ENSRNOT00000084722|Fam110a|ENSRNOG00000050946|family with sequence similarity 110%2C member A [Source:RGD Symbol%3BAcc:1308904]
rn6_v1_chr8_-_30222036_30222036	0.00184548	Sox2	ENSRNOT00000035454|Ntm|ENSRNOG00000023720|neurotrimin [Source:RGD Symbol%3BAcc:620958]
rn6_v1_chr16_-_81912738_81912738	0.00183399	Sox2	ENSRNOT00000087095|Mcf2l|ENSRNOG00000028426|MCF.2 cell line derived transforming sequence-like [Source:RGD Symbol%3BAcc:619782]
rn6_v1_chr15_+_49069145_49069145	0.00182682	Sox2	ENSRNOT00000019487|Scara5|ENSRNOG00000014398|scavenger receptor class A%2C member 5 [Source:RGD Symbol%3BAcc:1306539]
rn6_v1_chr4_-_77706994_77706994	0.0015828	Sox2	ENSRNOT00000038517|Zfp777|ENSRNOG00000033639|zinc finger protein 777 [Source:RGD Symbol%3BAcc:1566056]
rn6_v1_chr17_+_31441630_31441640	0.00143213	Sox2	ENSRNOT00000083705|Tubb2b|ENSRNOG00000017445|tubulin%2C beta 2B class IIb [Source:RGD Symbol%3BAcc:1309427]	ENSRNOT00000023582|Tubb2b|ENSRNOG00000017445|tubulin%2C beta 2B class IIb [Source:RGD Symbol%3BAcc:1309427]
rn6_v1_chr10_-_74119009_74119032	0.00137708	Sox2	ENSRNOT00000085712|Dhx40|ENSRNOG00000004549|DEAH-box helicase 40 [Source:RGD Symbol%3BAcc:1359618]	ENSRNOT00000006926|Dhx40|ENSRNOG00000004549|DEAH-box helicase 40 [Source:RGD Symbol%3BAcc:1359618]
rn6_v1_chr3_-_161498951_161498951	0.00132831	Sox2	ENSRNOT00000024214|Ncoa5|ENSRNOG00000017824|nuclear receptor coactivator 5 [Source:RGD Symbol%3BAcc:1307702]
rn6_v1_chr5_+_118418799_118418799	0.00120412	Sox2	ENSRNOT00000012052|Alg6|ENSRNOG00000009045|ALG6%2C alpha-1%2C3-glucosyltransferase [Source:RGD Symbol%3BAcc:1308815]
rn6_v1_chr19_+_55594831_55594831	0.00113094	Sox2	ENSRNOT00000020313|Acsf3|ENSRNOG00000015077|acyl-CoA synthetase family member 3 [Source:RGD Symbol%3BAcc:1586037]
rn6_v1_chr13_-_53137253_53137253	0.00102648	Sox2	ENSRNOT00000011368|Gpr25|ENSRNOG00000008603|G protein-coupled receptor 25 [Source:RGD Symbol%3BAcc:1311611]
rn6_v1_chr17_-_8429338_8429338	0.00102329	Sox2	ENSRNOT00000016390|Tgfbi|ENSRNOG00000012216|transforming growth factor%2C beta induced [Source:RGD Symbol%3BAcc:620017]
rn6_v1_chr11_+_87366621_87366621	0.000997627	Sox2	ENSRNOT00000040978|Aifm3|ENSRNOG00000037957|apoptosis inducing factor%2C mitochondria associated 3 [Source:RGD Symbol%3BAcc:1306028]
rn6_v1_chr17_+_9679628_9679665	0.000861893	Sox2	ENSRNOT00000019569|Dbn1|ENSRNOG00000014170|drebrin 1 [Source:RGD Symbol%3BAcc:70885]	ENSRNOT00000019393|Dbn1|ENSRNOG00000014170|drebrin 1 [Source:RGD Symbol%3BAcc:70885]
rn6_v1_chr11_-_69355854_69355854	0.000849206	Sox2	ENSRNOT00000002975|Ropn1|ENSRNOG00000002187|rhophilin associated tail protein 1 [Source:RGD Symbol%3BAcc:1310675]
rn6_v1_chr5_+_145188323_145188323	0.000579642	Sox2	ENSRNOT00000038888|Tmem35b|ENSRNOG00000028083|transmembrane protein 35B [Source:RGD Symbol%3BAcc:2319741]
rn6_v1_chr11_-_87017115_87017115	0.000521354	Sox2	ENSRNOT00000051037|Rtn4r|ENSRNOG00000030920|reticulon 4 receptor [Source:RGD Symbol%3BAcc:620810]
rn6_v1_chr20_+_1787174_1787310	0.000397606	Sox2	ENSRNOT00000072824|Olr1738|ENSRNOG00000029883|olfactory receptor 1738 [Source:RGD Symbol%3BAcc:1333138]	ENSRNOT00000041883|Olr1738|ENSRNOG00000029883|olfactory receptor 1738 [Source:RGD Symbol%3BAcc:1333138]
