GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Dbp Links NCBI RGD Ensembl	ENSRNOG00000021027	D-box binding PAR bZIP transcription factor

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Dbp	rn6_v1_chr1_+_101688297_101688297	-0.04	4.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr16_-_39476384 Show fit	53.85	ENSRNOT00000092968	Gpm6a Links NCBI RGD Ensembl Show fit	glycoprotein m6a
chr9_-_28732919 Show fit	51.21	ENSRNOT00000083915	Rims1 Links NCBI RGD Ensembl Show fit	regulating synaptic membrane exocytosis 1
chr16_-_39476025 Show fit	48.88	ENSRNOT00000014312	Gpm6a Links NCBI RGD Ensembl Show fit	glycoprotein m6a
chr6_+_48452369 Show fit	43.02	ENSRNOT00000044310	Myt1l Links NCBI RGD Ensembl Show fit	myelin transcription factor 1-like
chr11_+_42259761 Show fit	42.47	ENSRNOT00000047310	Epha6 Links NCBI RGD Ensembl Show fit	Eph receptor A6
chr15_-_77736892 Show fit	37.91	ENSRNOT00000057924	Pcdh9 Links NCBI RGD Ensembl Show fit	protocadherin 9
chr2_+_66940057 Show fit	33.17	ENSRNOT00000043050	Cdh9 Links NCBI RGD Ensembl Show fit	cadherin 9
chr2_-_89310946 Show fit	32.70	ENSRNOT00000015195	Ralyl Links NCBI RGD Ensembl Show fit	RALY RNA binding protein-like
chr2_+_54191538 Show fit	31.79	ENSRNOT00000019524	Plcxd3 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-specific phospholipase C, X domain containing 3
chr16_-_28716885 Show fit	31.73	ENSRNOT00000059750	Spock3 Links NCBI RGD Ensembl Show fit	SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3
chr7_+_48867664 Show fit	31.53	ENSRNOT00000005862	Ppfia2 Links NCBI RGD Ensembl Show fit	PTPRF interacting protein alpha 2
chr3_-_158328881 Show fit	30.83	ENSRNOT00000044466	Ptprt Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, T
chr17_-_27969433 Show fit	30.07	ENSRNOT00000073967	Nrn1 Links NCBI RGD Ensembl Show fit	neuritin 1
chr5_+_43603043 Show fit	28.99	ENSRNOT00000009899	Epha7 Links NCBI RGD Ensembl Show fit	Eph receptor A7
chr2_-_212852870 Show fit	28.74	ENSRNOT00000066218	Ntng1 Links NCBI RGD Ensembl Show fit	netrin G1
chrX_-_131343853 Show fit	28.39	ENSRNOT00000038653	Dcaf12l1 Links NCBI RGD Ensembl Show fit	DDB1 and CUL4 associated factor 12-like 1
chr1_-_198454914 Show fit	28.20	ENSRNOT00000049044	Prrt2 Links NCBI RGD Ensembl Show fit	proline-rich transmembrane protein 2
chr15_+_96821832 Show fit	27.50	ENSRNOT00000012785	Slitrk5 Links NCBI RGD Ensembl Show fit	SLIT and NTRK-like family, member 5
chr7_-_76294663 Show fit	27.00	ENSRNOT00000064513	Ncald Links NCBI RGD Ensembl Show fit	neurocalcin delta
chr6_+_126874193 Show fit	26.78	ENSRNOT00000011775	Unc79 Links NCBI RGD Ensembl Show fit	unc-79 homolog (C. elegans)
chr14_+_39663421 Show fit	25.46	ENSRNOT00000003197	Gabra2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor alpha2 subunit
chr15_-_93307420 Show fit	24.62	ENSRNOT00000012195	Slitrk1 Links NCBI RGD Ensembl Show fit	SLIT and NTRK-like family, member 1
chr2_-_35104963 Show fit	24.13	ENSRNOT00000018058	Rgs7bp Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 7-binding protein
chr3_+_95707386 Show fit	23.67	ENSRNOT00000005882	Pax6 Links NCBI RGD Ensembl Show fit	paired box 6
chr3_-_150064438 Show fit	22.53	ENSRNOT00000086933	E2f1 Links NCBI RGD Ensembl Show fit	E2F transcription factor 1
chrX_+_92596378 Show fit	22.30	ENSRNOT00000045001	Pcdh11x Links NCBI RGD Ensembl Show fit	protocadherin 11 X-linked
chrX_-_38468360 Show fit	22.11	ENSRNOT00000045285	Map7d2 Links NCBI RGD Ensembl Show fit	MAP7 domain containing 2
chrX_+_39711201 Show fit	21.82	ENSRNOT00000080512 ENSRNOT00000009802	Cnksr2 Links NCBI RGD Ensembl Show fit	connector enhancer of kinase suppressor of Ras 2
chr18_-_18079560 Show fit	21.21	ENSRNOT00000072093	AABR07031533.1 Links NCBI RGD Ensembl Show fit
chr2_+_50099576 Show fit	21.16	ENSRNOT00000089218	Hcn1 Links NCBI RGD Ensembl Show fit	hyperpolarization-activated cyclic nucleotide-gated potassium channel 1
chrX_+_62727755 Show fit	21.02	ENSRNOT00000077055	Pcyt1b Links NCBI RGD Ensembl Show fit	phosphate cytidylyltransferase 1, choline, beta
chr2_+_102685513 Show fit	20.23	ENSRNOT00000033940	Bhlhe22 Links NCBI RGD Ensembl Show fit	basic helix-loop-helix family, member e22
chr10_-_8654892 Show fit	20.04	ENSRNOT00000066534	Rbfox1 Links NCBI RGD Ensembl Show fit	RNA binding protein, fox-1 homolog 1
chr10_-_31359699 Show fit	19.87	ENSRNOT00000081280	Cyfip2 Links NCBI RGD Ensembl Show fit	cytoplasmic FMR1 interacting protein 2
chr10_+_77762900 Show fit	19.80	ENSRNOT00000003308	Mmd Links NCBI RGD Ensembl Show fit	monocyte to macrophage differentiation-associated
chr11_-_30051103 Show fit	19.20	ENSRNOT00000046486	Tiam1 Links NCBI RGD Ensembl Show fit	T-cell lymphoma invasion and metastasis 1
chr18_-_26211445 Show fit	18.87	ENSRNOT00000027739	Nrep Links NCBI RGD Ensembl Show fit	neuronal regeneration related protein
chr2_-_173087648 Show fit	17.91	ENSRNOT00000091079	Iqcj Links NCBI RGD Ensembl Show fit	IQ motif containing J
chr9_-_71852113 Show fit	17.71	ENSRNOT00000083263 ENSRNOT00000072983	AABR07067896.1 Links NCBI RGD Ensembl Show fit
chr3_-_120076788 Show fit	17.50	ENSRNOT00000047158	Kcnip3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel interacting protein 3
chr2_-_188645196 Show fit	17.47	ENSRNOT00000083793	Efna3 Links NCBI RGD Ensembl Show fit	ephrin A3
chr3_-_120087136 Show fit	16.72	ENSRNOT00000078994	Kcnip3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel interacting protein 3
chr7_+_23403891 Show fit	16.19	ENSRNOT00000037918	Syn3 Links NCBI RGD Ensembl Show fit	synapsin III
chr14_+_17531398 Show fit	16.12	ENSRNOT00000050038	Cdkl2 Links NCBI RGD Ensembl Show fit	cyclin dependent kinase like 2
chr1_-_170404056 Show fit	15.83	ENSRNOT00000024402	Apbb1 Links NCBI RGD Ensembl Show fit	amyloid beta precursor protein binding family B member 1
chr3_+_8537350 Show fit	15.56	ENSRNOT00000079640	Sptan1 Links NCBI RGD Ensembl Show fit	spectrin, alpha, non-erythrocytic 1
chr5_-_12526962 Show fit	15.43	ENSRNOT00000092104	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr12_-_40822159 Show fit	15.30	ENSRNOT00000001826	Hectd4 Links NCBI RGD Ensembl Show fit	HECT domain E3 ubiquitin protein ligase 4
chr1_+_17602281 Show fit	14.83	ENSRNOT00000075461	LOC103690149 Links NCBI RGD Ensembl Show fit	jouberin-like
chr8_-_120446455 Show fit	14.30	ENSRNOT00000085161 ENSRNOT00000042854 ENSRNOT00000037199	Arpp21 Links NCBI RGD Ensembl Show fit	cAMP regulated phosphoprotein 21
chr8_+_59344083 Show fit	14.08	ENSRNOT00000031175	Crabp1 Links NCBI RGD Ensembl Show fit	cellular retinoic acid binding protein 1
chrX_+_84064427 Show fit	14.07	ENSRNOT00000046364	Zfp711 Links NCBI RGD Ensembl Show fit	zinc finger protein 711
chr13_-_107886476 Show fit	13.80	ENSRNOT00000077282	Kcnk2 Links NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 2
chr2_+_155555840 Show fit	13.54	ENSRNOT00000080951	AABR07010944.1 Links NCBI RGD Ensembl Show fit
chr8_-_122311431 Show fit	13.53	ENSRNOT00000033126	Fbxl2 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 2
chrX_-_142164220 Show fit	13.12	ENSRNOT00000064780	Fgf13 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 13
chr20_+_25990656 Show fit	13.00	ENSRNOT00000081254	Lrrtm3 Links NCBI RGD Ensembl Show fit	leucine rich repeat transmembrane neuronal 3
chr5_+_136669674 Show fit	12.90	ENSRNOT00000048770	Slc6a9 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 9
chr20_-_27578244 Show fit	12.79	ENSRNOT00000000708	Fam26d Links NCBI RGD Ensembl Show fit	family with sequence similarity 26, member D
chr18_+_30581530 Show fit	12.33	ENSRNOT00000048166	Pcdhb20 Links NCBI RGD Ensembl Show fit	protocadherin beta 20
chr3_+_81498022 Show fit	11.90	ENSRNOT00000010510	Chst1 Links NCBI RGD Ensembl Show fit	carbohydrate sulfotransferase 1
chr6_+_137997335 Show fit	11.86	ENSRNOT00000006872	Tmem121 Links NCBI RGD Ensembl Show fit	transmembrane protein 121
chr1_-_81946714 Show fit	11.77	ENSRNOT00000027578	Grik5 Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor kainate type subunit 5
chrX_-_30831483 Show fit	11.53	ENSRNOT00000004443	Glra2 Links NCBI RGD Ensembl Show fit	glycine receptor, alpha 2
chr10_-_90240509 Show fit	11.52	ENSRNOT00000028407	Atxn7l3 Links NCBI RGD Ensembl Show fit	ataxin 7-like 3
chr11_+_69484293 Show fit	11.42	ENSRNOT00000049292	Kalrn Links NCBI RGD Ensembl Show fit	kalirin, RhoGEF kinase
chr2_-_63166509 Show fit	11.37	ENSRNOT00000018246	Cdh6 Links NCBI RGD Ensembl Show fit	cadherin 6
chr2_+_239415046 Show fit	10.99	ENSRNOT00000072196	Cxxc4 Links NCBI RGD Ensembl Show fit	CXXC finger protein 4
chr15_-_60743064 Show fit	10.80	ENSRNOT00000013333	Akap11 Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 11
chr4_+_24222500 Show fit	10.79	ENSRNOT00000045346	Zfp804b Links NCBI RGD Ensembl Show fit	zinc finger protein 804B
chr4_+_81311490 Show fit	10.52	ENSRNOT00000016265	Snx10 Links NCBI RGD Ensembl Show fit	sorting nexin 10
chr18_-_5314511 Show fit	10.33	ENSRNOT00000022637 ENSRNOT00000079682	Zfp521 Links NCBI RGD Ensembl Show fit	zinc finger protein 521
chrX_+_112270986 Show fit	10.08	ENSRNOT00000091441 ENSRNOT00000082652	Vsig1 Links NCBI RGD Ensembl Show fit	V-set and immunoglobulin domain containing 1
chr20_+_25990304 Show fit	9.95	ENSRNOT00000033980	Lrrtm3 Links NCBI RGD Ensembl Show fit	leucine rich repeat transmembrane neuronal 3
chrX_+_15988604 Show fit	9.80	ENSRNOT00000003800	Usp27x Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 27, X-linked
chr3_+_160231914 Show fit	9.60	ENSRNOT00000014411	Kcnk15 Links NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 15
chr18_-_29015552 Show fit	9.11	ENSRNOT00000028713	Nrg2 Links NCBI RGD Ensembl Show fit	neuregulin 2
chr6_+_22696397 Show fit	8.93	ENSRNOT00000011630	Alk Links NCBI RGD Ensembl Show fit	anaplastic lymphoma receptor tyrosine kinase
chr19_+_46733633 Show fit	8.78	ENSRNOT00000016307	Clec3a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 3, member A
chr4_+_157513414 Show fit	8.41	ENSRNOT00000078769	Pianp Links NCBI RGD Ensembl Show fit	PILR alpha associated neural protein
chr13_-_1946508 Show fit	8.23	ENSRNOT00000043890	Dsel Links NCBI RGD Ensembl Show fit	dermatan sulfate epimerase-like
chr6_+_132551394 Show fit	8.20	ENSRNOT00000019583	Evl Links NCBI RGD Ensembl Show fit	Enah/Vasp-like
chr18_-_39957265 Show fit	8.00	ENSRNOT00000042653	AABR07031937.1 Links NCBI RGD Ensembl Show fit
chr3_-_134696654 Show fit	7.99	ENSRNOT00000006454	Flrt3 Links NCBI RGD Ensembl Show fit	fibronectin leucine rich transmembrane protein 3
chr9_+_100104000 Show fit	7.86	ENSRNOT00000074160	Capn10 Links NCBI RGD Ensembl Show fit	calpain 10
chr13_-_51201331 Show fit	7.76	ENSRNOT00000005272 ENSRNOT00000078990	Tmem183a Links NCBI RGD Ensembl Show fit	transmembrane protein 183A
chr15_+_344685 Show fit	7.75	ENSRNOT00000065542 ENSRNOT00000066928	Kcnma1 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily M alpha 1
chr7_-_68549763 Show fit	7.70	ENSRNOT00000078014	Slc16a7 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 7
chr1_+_190671696 Show fit	7.62	ENSRNOT00000084934	AABR07005633.1 Links NCBI RGD Ensembl Show fit
chr10_+_65767930 Show fit	7.46	ENSRNOT00000039954	Vtn Links NCBI RGD Ensembl Show fit	vitronectin
chr2_+_211320420 Show fit	7.32	ENSRNOT00000027504	RGD1309139 Links NCBI RGD Ensembl Show fit	similar to CG5435-PA
chr4_-_45332420 Show fit	7.18	ENSRNOT00000083039	Wnt2 Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family member 2
chr7_-_3315856 Show fit	7.16	ENSRNOT00000010035	Gdf11 Links NCBI RGD Ensembl Show fit	growth differentiation factor 11
chr18_+_28370085 Show fit	7.16	ENSRNOT00000083993	Matr3 Links NCBI RGD Ensembl Show fit	matrin 3
chr2_-_118989127 Show fit	6.90	ENSRNOT00000014871	Gnb4 Links NCBI RGD Ensembl Show fit	G protein subunit beta 4
chr14_-_17333588 Show fit	6.74	ENSRNOT00000077636	Ppef2 Links NCBI RGD Ensembl Show fit	protein phosphatase with EF-hand domain 2
chr12_-_18526250 Show fit	6.68	ENSRNOT00000001791	Asmt Links NCBI RGD Ensembl Show fit	acetylserotonin O-methyltransferase
chr20_-_25826658 Show fit	6.39	ENSRNOT00000057950 ENSRNOT00000084660	Ctnna3 Links NCBI RGD Ensembl Show fit	catenin alpha 3
chr1_+_265157379 Show fit	6.39	ENSRNOT00000022426	Btrc Links NCBI RGD Ensembl Show fit	beta-transducin repeat containing E3 ubiquitin protein ligase
chr8_-_12902262 Show fit	6.37	ENSRNOT00000033969	Endod1 Links NCBI RGD Ensembl Show fit	endonuclease domain containing 1
chr15_+_51756978 Show fit	6.36	ENSRNOT00000024067	Egr3 Links NCBI RGD Ensembl Show fit	early growth response 3
chr4_-_68819872 Show fit	6.26	ENSRNOT00000033265 ENSRNOT00000081884	Clec5a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 5, member A
chr9_+_119542328 Show fit	6.15	ENSRNOT00000082005	Lpin2 Links NCBI RGD Ensembl Show fit	lipin 2
chr5_-_70463546 Show fit	6.05	ENSRNOT00000043184	AC118841.1 Links NCBI RGD Ensembl Show fit
chr7_-_33793565 Show fit	5.99	ENSRNOT00000065354	AABR07056633.1 Links NCBI RGD Ensembl Show fit
chr10_-_46332172 Show fit	5.95	ENSRNOT00000004475	Rasd1 Links NCBI RGD Ensembl Show fit	ras related dexamethasone induced 1
chr14_+_108826831 Show fit	5.53	ENSRNOT00000083146 ENSRNOT00000009421	Bcl11a Links NCBI RGD Ensembl Show fit	B-cell CLL/lymphoma 11A
chr19_-_17045349 Show fit	5.32	ENSRNOT00000086829	Fto Links NCBI RGD Ensembl Show fit	FTO, alpha-ketoglutarate dependent dioxygenase
chr13_-_48927483 Show fit	5.19	ENSRNOT00000010976	Cdk18 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 18
chr10_+_90230711 Show fit	4.91	ENSRNOT00000055185	Tmub2 Links NCBI RGD Ensembl Show fit	transmembrane and ubiquitin-like domain containing 2
chr12_-_5822874 Show fit	4.91	ENSRNOT00000075920	Fry Links NCBI RGD Ensembl Show fit	FRY microtubule binding protein
chr2_-_210454737 Show fit	4.68	ENSRNOT00000079993	Ahcyl1 Links NCBI RGD Ensembl Show fit	adenosylhomocysteinase-like 1
chr17_+_43632397 Show fit	4.60	ENSRNOT00000013790	Hist1h2ah Links NCBI RGD Ensembl Show fit	histone cluster 1, H2ah
chr10_-_87578854 Show fit	4.58	ENSRNOT00000065619	LOC680160 Links NCBI RGD Ensembl Show fit	similar to keratin associated protein 4-7
chr4_+_8066907 Show fit	4.56	ENSRNOT00000080811	Srpk2 Links NCBI RGD Ensembl Show fit	SRSF protein kinase 2
chr18_+_61258911 Show fit	4.52	ENSRNOT00000082403	Zfp532 Links NCBI RGD Ensembl Show fit	zinc finger protein 532
chr18_+_61261418 Show fit	4.50	ENSRNOT00000064250	Zfp532 Links NCBI RGD Ensembl Show fit	zinc finger protein 532
chr2_-_189818224 Show fit	4.40	ENSRNOT00000020575	Ints3 Links NCBI RGD Ensembl Show fit	integrator complex subunit 3
chr1_-_226292480 Show fit	4.38	ENSRNOT00000039133	Myrf Links NCBI RGD Ensembl Show fit	myelin regulatory factor
chr7_-_143966863 Show fit	4.32	ENSRNOT00000018828	Sp7 Links NCBI RGD Ensembl Show fit	Sp7 transcription factor
chr5_+_140692779 Show fit	4.26	ENSRNOT00000019101	Mycl Links NCBI RGD Ensembl Show fit	v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
chr8_-_39551700 Show fit	4.22	ENSRNOT00000091894 ENSRNOT00000076025	Pknox2 Links NCBI RGD Ensembl Show fit	PBX/knotted 1 homeobox 2
chr18_+_30864216 Show fit	4.08	ENSRNOT00000027015	Pcdhga7 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily A, 7
chr4_-_42188289 Show fit	3.98	ENSRNOT00000081688	Rbmxl1b Links NCBI RGD Ensembl Show fit	RNA binding motif protein, X-linked-like 1B
chr13_+_34483876 Show fit	3.98	ENSRNOT00000092998	Clasp1 Links NCBI RGD Ensembl Show fit	cytoplasmic linker associated protein 1
chr2_+_58462588 Show fit	3.74	ENSRNOT00000083799	Nadk2 Links NCBI RGD Ensembl Show fit	NAD kinase 2, mitochondrial
chr2_+_92574038 Show fit	3.69	ENSRNOT00000089422	tGap1 Links NCBI RGD Ensembl Show fit	GTPase activating protein testicular GAP1
chr13_-_111948753 Show fit	3.64	ENSRNOT00000048074	Hsd11b1 Links NCBI RGD Ensembl Show fit	hydroxysteroid 11-beta dehydrogenase 1
chr12_-_41671437 Show fit	3.60	ENSRNOT00000001883	Lhx5 Links NCBI RGD Ensembl Show fit	LIM homeobox 5
chr16_-_6405117 Show fit	3.60	ENSRNOT00000047737	Cacna1d Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 D
chr6_+_52631092 Show fit	3.57	ENSRNOT00000014054	Atxn7l1 Links NCBI RGD Ensembl Show fit	ataxin 7-like 1
chr11_-_81717521 Show fit	3.47	ENSRNOT00000058422	Ahsg Links NCBI RGD Ensembl Show fit	alpha-2-HS-glycoprotein
chr14_+_22706901 Show fit	3.47	ENSRNOT00000088798	Ppial4d Links NCBI RGD Ensembl Show fit	peptidylprolyl isomerase A (cyclophilin A)-like 4D
chr20_-_22459025 Show fit	3.38	ENSRNOT00000000792	Egr2 Links NCBI RGD Ensembl Show fit	early growth response 2
chr5_+_60850852 Show fit	3.28	ENSRNOT00000016720	Trmt10b Links NCBI RGD Ensembl Show fit	tRNA methyltransferase 10B
chr16_-_6404578 Show fit	3.26	ENSRNOT00000051371	Cacna1d Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 D
chr10_+_29165577 Show fit	3.25	ENSRNOT00000078415	Ccnjl Links NCBI RGD Ensembl Show fit	cyclin J-like
chr4_+_8066737 Show fit	3.11	ENSRNOT00000063994	Srpk2 Links NCBI RGD Ensembl Show fit	SRSF protein kinase 2
chr1_-_72311856 Show fit	3.04	ENSRNOT00000021286	Epn1 Links NCBI RGD Ensembl Show fit	Epsin 1
chr5_-_86554102 Show fit	2.90	ENSRNOT00000083340 ENSRNOT00000007710	Cdk5rap2 Links NCBI RGD Ensembl Show fit	CDK5 regulatory subunit associated protein 2
chrX_+_111396995 Show fit	2.85	ENSRNOT00000087634	Pih1d3 Links NCBI RGD Ensembl Show fit	PIH1 domain containing 3
chr7_+_80750725 Show fit	2.78	ENSRNOT00000079962	Oxr1 Links NCBI RGD Ensembl Show fit	oxidation resistance 1
chr8_+_79054237 Show fit	2.78	ENSRNOT00000077613	Mns1 Links NCBI RGD Ensembl Show fit	meiosis-specific nuclear structural 1
chr15_+_31533675 Show fit	2.73	ENSRNOT00000084141	AABR07017825.7 Links NCBI RGD Ensembl Show fit
chr15_+_47373120 Show fit	2.71	ENSRNOT00000070815	Rp1l1 Links NCBI RGD Ensembl Show fit	RP1 like 1
chr15_-_32925673 Show fit	2.69	ENSRNOT00000081045	Olr1646 Links NCBI RGD Ensembl Show fit	olfactory receptor 1646
chr3_+_175426752 Show fit	2.68	ENSRNOT00000085718	Ss18l1 Links NCBI RGD Ensembl Show fit	SS18L1, nBAF chromatin remodeling complex subunit
chrX_+_23414354 Show fit	2.63	ENSRNOT00000031235	Cldn34a Links NCBI RGD Ensembl Show fit	claudin 34A
chr20_+_3823042 Show fit	2.62	ENSRNOT00000041613	Rxrb Links NCBI RGD Ensembl Show fit	retinoid X receptor beta
chr10_-_81942188 Show fit	2.58	ENSRNOT00000003784	Wfikkn2 Links NCBI RGD Ensembl Show fit	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
chr18_-_58423196 Show fit	2.54	ENSRNOT00000025556	Piezo2 Links NCBI RGD Ensembl Show fit	piezo-type mechanosensitive ion channel component 2
chr6_+_93461713 Show fit	2.46	ENSRNOT00000031595	Arid4a Links NCBI RGD Ensembl Show fit	AT-rich interaction domain 4A
chr10_-_48038647 Show fit	2.35	ENSRNOT00000078448	Prpsap2 Links NCBI RGD Ensembl Show fit	phosphoribosyl pyrophosphate synthetase-associated protein 2
chr4_+_114776797 Show fit	2.32	ENSRNOT00000089635	LOC103692167 Links NCBI RGD Ensembl Show fit	polycomb group RING finger protein 1
chr5_-_117612123 Show fit	2.31	ENSRNOT00000065112	Dock7 Links NCBI RGD Ensembl Show fit	dedicator of cytokinesis 7
chr16_-_54628458 Show fit	2.28	ENSRNOT00000042587	Adam24 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 24
chr12_-_1512130 Show fit	2.12	ENSRNOT00000086278	AABR07034940.2 Links NCBI RGD Ensembl Show fit
chr11_-_83867203 Show fit	2.01	ENSRNOT00000002394	Chrd Links NCBI RGD Ensembl Show fit	chordin
chrX_+_32745873 Show fit	1.94	ENSRNOT00000005559	Grpr Links NCBI RGD Ensembl Show fit	gastrin releasing peptide receptor
chr10_+_35133252 Show fit	1.83	ENSRNOT00000051916	Scgb3a1 Links NCBI RGD Ensembl Show fit	secretoglobin, family 3A, member 1
chr1_+_277261681 Show fit	1.82	ENSRNOT00000022724	Plekhs1 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing S1
chr11_-_66807694 Show fit	1.78	ENSRNOT00000083152	Golgb1 Links NCBI RGD Ensembl Show fit	golgin B1
chr12_-_38274036 Show fit	1.76	ENSRNOT00000063990	Kntc1 Links NCBI RGD Ensembl Show fit	kinetochore associated 1
chr7_-_24667301 Show fit	1.75	ENSRNOT00000009154	Tmem263 Links NCBI RGD Ensembl Show fit	transmembrane protein 263
chr15_+_23792931 Show fit	1.75	ENSRNOT00000092091	Samd4a Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 4A
chr4_-_166869399 Show fit	1.73	ENSRNOT00000007521	Tas2r121 Links NCBI RGD Ensembl Show fit	taste receptor, type 2, member 121
chr2_-_154542557 Show fit	1.65	ENSRNOT00000013392	Slc33a1 Links NCBI RGD Ensembl Show fit	solute carrier family 33 member 1
chr5_+_139394794 Show fit	1.60	ENSRNOT00000045954	Scmh1 Links NCBI RGD Ensembl Show fit	sex comb on midleg homolog 1 (Drosophila)
chr1_+_266844480 Show fit	1.54	ENSRNOT00000027482	Taf5 Links NCBI RGD Ensembl Show fit	TATA-box binding protein associated factor 5
chr5_-_50221095 Show fit	1.51	ENSRNOT00000012164	RGD1563056 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein
chr19_-_43955747 Show fit	1.50	ENSRNOT00000058891 ENSRNOT00000041815	Bcar1 Links NCBI RGD Ensembl Show fit	BCAR1, Cas family scaffolding protein
chr3_-_2680622 Show fit	1.49	ENSRNOT00000020806	RGD1306215 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC36831
chr1_-_129228068 Show fit	1.47	ENSRNOT00000044428	AABR07004183.1 Links NCBI RGD Ensembl Show fit
chr14_-_2610929 Show fit	1.46	ENSRNOT00000036442	Ccdc18 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 18
chr5_+_119727839 Show fit	1.45	ENSRNOT00000014354	Cachd1 Links NCBI RGD Ensembl Show fit	cache domain containing 1
chr3_+_80676820 Show fit	1.41	ENSRNOT00000084809	Ambra1 Links NCBI RGD Ensembl Show fit	autophagy and beclin 1 regulator 1
chr17_+_34704616 Show fit	1.39	ENSRNOT00000090706 ENSRNOT00000083674 ENSRNOT00000077110	Exoc2 Links NCBI RGD Ensembl Show fit	exocyst complex component 2
chr14_-_44348691 Show fit	1.39	ENSRNOT00000030485	Ube2k Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2K
chr7_-_114573900 Show fit	1.37	ENSRNOT00000011219	Ptk2 Links NCBI RGD Ensembl Show fit	protein tyrosine kinase 2
chr1_-_188895223 Show fit	1.28	ENSRNOT00000032796	Gpr139 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 139
chr11_-_28614260 Show fit	1.23	ENSRNOT00000074102	Krtap26-1 Links NCBI RGD Ensembl Show fit	keratin associated protein 26-1
chr4_-_130659697 Show fit	1.20	ENSRNOT00000072374	LOC100363436 Links NCBI RGD Ensembl Show fit	rCG56280-like
chr20_-_3822754 Show fit	1.10	ENSRNOT00000000541 ENSRNOT00000077357	Slc39a7 Links NCBI RGD Ensembl Show fit	solute carrier family 39 member 7
chr15_+_102164751 Show fit	1.08	ENSRNOT00000076400	Gpc6 Links NCBI RGD Ensembl Show fit	glypican 6
chr7_-_123767797 Show fit	1.01	ENSRNOT00000012699	Tcf20 Links NCBI RGD Ensembl Show fit	transcription factor 20
chr3_+_138174054 Show fit	1.01	ENSRNOT00000007946	Banf2 Links NCBI RGD Ensembl Show fit	barrier to autointegration factor 2
chr1_-_169321075 Show fit	1.00	ENSRNOT00000055216	RGD1562433 Links NCBI RGD Ensembl Show fit	similar to ubiquilin 1 isoform 2
chr7_+_29909120 Show fit	0.77	ENSRNOT00000049362	AABR07056556.1 Links NCBI RGD Ensembl Show fit
chr16_+_69089955 Show fit	0.73	ENSRNOT00000017324	Brf2 Links NCBI RGD Ensembl Show fit	BRF2, RNA polymerase III transcription initiation factor 50 subunit
chr3_+_72990358 Show fit	0.73	ENSRNOT00000091920	Olr444 Links NCBI RGD Ensembl Show fit	olfactory receptor 444
chr16_+_71787966 Show fit	0.73	ENSRNOT00000080084	Htra4 Links NCBI RGD Ensembl Show fit	HtrA serine peptidase 4
chr8_+_44990014 Show fit	0.72	ENSRNOT00000044608	Hspa8 Links NCBI RGD Ensembl Show fit	heat shock protein family A (Hsp70) member 8
chr8_+_4440876 Show fit	0.68	ENSRNOT00000049325 ENSRNOT00000076529 ENSRNOT00000076748	Pdgfd Links NCBI RGD Ensembl Show fit	platelet derived growth factor D
chr2_-_49128501 Show fit	0.62	ENSRNOT00000073847	Parp8 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 8
chr10_+_56512615 Show fit	0.56	ENSRNOT00000021883	Neurl4 Links NCBI RGD Ensembl Show fit	neuralized E3 ubiquitin protein ligase 4
chr7_+_109411475 Show fit	0.44	ENSRNOT00000051728	RGD1564548 Links NCBI RGD Ensembl Show fit	similar to H3 histone, family 3B
chr1_+_51619875 Show fit	0.35	ENSRNOT00000023319	Pabpc6 Links NCBI RGD Ensembl Show fit	poly(A) binding protein, cytoplasmic 6
chr3_-_75879716 Show fit	0.35	ENSRNOT00000007553	Olr584 Links NCBI RGD Ensembl Show fit	olfactory receptor 584
chr10_+_34804878 Show fit	0.34	ENSRNOT00000043954	Olr1401 Links NCBI RGD Ensembl Show fit	olfactory receptor 1401
chr5_-_150506871 Show fit	0.22	ENSRNOT00000086131	Trnau1ap Links NCBI RGD Ensembl Show fit	tRNA selenocysteine 1 associated protein 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
17.1	51.2	GO:0031632	positive regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031632)
7.9	23.7	GO:0021918	pancreatic A cell development(GO:0003322) forebrain-midbrain boundary formation(GO:0021905) somatic motor neuron fate commitment(GO:0021917) regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment(GO:0021918) sensory neuron migration(GO:1904937)
6.1	30.6	GO:0098989	NMDA selective glutamate receptor signaling pathway(GO:0098989)
5.9	11.8	GO:0031630	regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031630)
5.3	21.2	GO:1902630	regulation of membrane hyperpolarization(GO:1902630)
5.1	30.4	GO:0051964	negative regulation of synapse assembly(GO:0051964)
4.6	13.8	GO:1900039	positive regulation of cellular response to hypoxia(GO:1900039)
4.5	22.5	GO:0071930	negative regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0071930)
4.0	31.7	GO:0019800	peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800)
3.5	14.1	GO:0034653	diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653)
3.4	3.4	GO:0021593	rhombomere morphogenesis(GO:0021593)
3.0	8.9	GO:0090648	response to environmental enrichment(GO:0090648)
3.0	11.9	GO:0042339	keratan sulfate metabolic process(GO:0042339)
2.9	20.2	GO:0021960	anterior commissure morphogenesis(GO:0021960)
2.6	7.8	GO:0060082	eye blink reflex(GO:0060082)
2.5	19.9	GO:0051388	positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388)
2.4	7.2	GO:0060492	foregut regionalization(GO:0060423) lung field specification(GO:0060424) lung induction(GO:0060492) Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation(GO:1904953) canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation(GO:1904954)
2.4	102.7	GO:0051491	positive regulation of filopodium assembly(GO:0051491)
2.3	20.4	GO:1904116	response to vasopressin(GO:1904116)
2.2	6.7	GO:0030186	melatonin metabolic process(GO:0030186)
2.2	24.4	GO:0060012	synaptic transmission, glycinergic(GO:0060012)
2.2	15.4	GO:0045196	establishment or maintenance of neuroblast polarity(GO:0045196) establishment of neuroblast polarity(GO:0045200)
1.9	23.0	GO:1902993	positive regulation of beta-amyloid formation(GO:1902004) positive regulation of amyloid precursor protein catabolic process(GO:1902993)
1.8	5.5	GO:1903860	negative regulation of dendrite extension(GO:1903860)
1.8	5.3	GO:0042245	RNA repair(GO:0042245)
1.5	7.7	GO:1901475	pyruvate transmembrane transport(GO:1901475)
1.5	7.7	GO:0035063	nuclear speck organization(GO:0035063)
1.5	28.2	GO:0050884	neuromuscular process controlling posture(GO:0050884)
1.5	4.4	GO:0032286	central nervous system myelin maintenance(GO:0032286)
1.3	20.0	GO:0048149	behavioral response to ethanol(GO:0048149)
1.3	34.2	GO:0048266	behavioral response to pain(GO:0048266)
1.3	59.9	GO:0048013	ephrin receptor signaling pathway(GO:0048013)
1.2	4.9	GO:1904428	negative regulation of tubulin deacetylation(GO:1904428)
1.2	3.6	GO:0006713	glucocorticoid catabolic process(GO:0006713)
1.2	27.5	GO:0021756	striatum development(GO:0021756)
0.9	8.0	GO:0003344	pericardium morphogenesis(GO:0003344)
0.9	7.9	GO:2000676	positive regulation of type B pancreatic cell apoptotic process(GO:2000676)
0.9	20.0	GO:2001014	regulation of skeletal muscle cell differentiation(GO:2001014)
0.8	6.4	GO:0086073	bundle of His cell-Purkinje myocyte adhesion involved in cell communication(GO:0086073)
0.8	6.9	GO:0086046	membrane depolarization during SA node cell action potential(GO:0086046)
0.7	3.4	GO:0006741	NADP biosynthetic process(GO:0006741)
0.7	7.5	GO:0061302	smooth muscle cell-matrix adhesion(GO:0061302)
0.7	11.4	GO:0016339	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.7	4.7	GO:0033353	S-adenosylmethionine cycle(GO:0033353)
0.7	19.9	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.6	1.9	GO:0031989	bombesin receptor signaling pathway(GO:0031989)
0.6	25.5	GO:0007214	gamma-aminobutyric acid signaling pathway(GO:0007214)
0.6	2.3	GO:0060468	prevention of polyspermy(GO:0060468)
0.6	8.5	GO:0030277	maintenance of gastrointestinal epithelium(GO:0030277)
0.5	4.3	GO:0045631	regulation of auditory receptor cell differentiation(GO:0045607) regulation of mechanoreceptor differentiation(GO:0045631) regulation of inner ear receptor cell differentiation(GO:2000980)
0.5	11.5	GO:0016578	histone deubiquitination(GO:0016578)
0.5	3.6	GO:0021937	cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation(GO:0021937)
0.5	1.5	GO:1990839	response to endothelin(GO:1990839) cellular response to endothelin(GO:1990859)
0.5	2.5	GO:0030205	dermatan sulfate metabolic process(GO:0030205)
0.5	15.2	GO:0019835	cytolysis(GO:0019835)
0.5	6.4	GO:0046643	regulation of gamma-delta T cell differentiation(GO:0045586) regulation of gamma-delta T cell activation(GO:0046643)
0.4	9.8	GO:0070536	protein K63-linked deubiquitination(GO:0070536)
0.4	2.9	GO:0046600	negative regulation of centriole replication(GO:0046600)
0.4	2.0	GO:0021914	negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021914)
0.4	53.0	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156)
0.4	24.6	GO:0051965	positive regulation of synapse assembly(GO:0051965)
0.4	4.0	GO:0090091	positive regulation of extracellular matrix disassembly(GO:0090091)
0.4	2.5	GO:0034773	histone H4-K20 trimethylation(GO:0034773)
0.3	1.4	GO:0010993	regulation of ubiquitin homeostasis(GO:0010993) free ubiquitin chain polymerization(GO:0010994)
0.3	15.3	GO:0051693	actin filament capping(GO:0051693)
0.3	7.2	GO:0021511	spinal cord patterning(GO:0021511)
0.3	0.7	GO:2000437	regulation of monocyte extravasation(GO:2000437)
0.3	6.7	GO:0010801	negative regulation of peptidyl-threonine phosphorylation(GO:0010801)
0.3	10.9	GO:0010738	regulation of protein kinase A signaling(GO:0010738)
0.3	6.3	GO:0033033	negative regulation of myeloid cell apoptotic process(GO:0033033)
0.3	27.0	GO:0003073	regulation of systemic arterial blood pressure(GO:0003073)
0.3	5.9	GO:0007263	nitric oxide mediated signal transduction(GO:0007263)
0.3	17.6	GO:0031103	axon regeneration(GO:0031103)
0.3	2.8	GO:1902083	negative regulation of peptidyl-cysteine S-nitrosylation(GO:1902083) regulation of peptidyl-cysteine S-nitrosylation(GO:2000169)
0.3	15.8	GO:0010039	response to iron ion(GO:0010039)
0.3	22.3	GO:0010923	negative regulation of phosphatase activity(GO:0010923)
0.3	8.1	GO:0071539	protein localization to centrosome(GO:0071539)
0.3	2.8	GO:0070986	left/right axis specification(GO:0070986)
0.2	15.0	GO:0034605	cellular response to heat(GO:0034605)
0.2	8.2	GO:0045010	actin nucleation(GO:0045010)
0.2	10.3	GO:0048663	neuron fate commitment(GO:0048663)
0.2	30.1	GO:1990138	neuron projection extension(GO:1990138)
0.2	1.7	GO:0051182	coenzyme transport(GO:0051182)
0.2	7.2	GO:0003170	heart valve development(GO:0003170)
0.2	3.5	GO:0045780	positive regulation of bone resorption(GO:0045780) positive regulation of bone remodeling(GO:0046852)
0.2	4.4	GO:0016180	snRNA processing(GO:0016180)
0.2	16.1	GO:1903955	positive regulation of protein targeting to mitochondrion(GO:1903955)
0.2	6.9	GO:0021762	substantia nigra development(GO:0021762)
0.1	1.5	GO:0051103	DNA ligation involved in DNA repair(GO:0051103)
0.1	0.8	GO:0001927	exocyst assembly(GO:0001927)
0.1	3.3	GO:0030488	tRNA methylation(GO:0030488)
0.1	16.2	GO:0007269	neurotransmitter secretion(GO:0007269) signal release from synapse(GO:0099643)
0.1	9.1	GO:0007173	epidermal growth factor receptor signaling pathway(GO:0007173)
0.1	2.6	GO:2000273	positive regulation of receptor activity(GO:2000273)
0.1	1.8	GO:1901741	positive regulation of myoblast fusion(GO:1901741)
0.1	5.6	GO:0035082	axoneme assembly(GO:0035082)
0.1	1.4	GO:0098780	response to mitochondrial depolarisation(GO:0098780)
0.1	3.5	GO:0000413	protein peptidyl-prolyl isomerization(GO:0000413)
0.1	2.5	GO:0050974	detection of mechanical stimulus involved in sensory perception(GO:0050974)
0.1	2.7	GO:0050775	positive regulation of dendrite morphogenesis(GO:0050775)
0.1	27.6	GO:0030900	forebrain development(GO:0030900)
0.1	2.6	GO:0043392	negative regulation of DNA binding(GO:0043392)
0.0	1.7	GO:0032467	positive regulation of cytokinesis(GO:0032467)
0.0	1.1	GO:0006882	cellular zinc ion homeostasis(GO:0006882)
0.0	0.7	GO:0006359	regulation of transcription from RNA polymerase III promoter(GO:0006359)
0.0	0.2	GO:2000074	regulation of type B pancreatic cell development(GO:2000074) negative regulation of glucocorticoid receptor signaling pathway(GO:2000323)
0.0	0.7	GO:0060218	hematopoietic stem cell differentiation(GO:0060218)
0.0	6.7	GO:0007409	axonogenesis(GO:0007409)
0.0	0.1	GO:0045162	clustering of voltage-gated sodium channels(GO:0045162)
0.0	0.2	GO:0001514	selenocysteine incorporation(GO:0001514) translational readthrough(GO:0006451)
0.0	1.3	GO:0007218	neuropeptide signaling pathway(GO:0007218)
0.0	3.0	GO:0007565	female pregnancy(GO:0007565)
0.0	1.5	GO:0030178	negative regulation of Wnt signaling pathway(GO:0030178)
0.0	1.5	GO:0016573	histone acetylation(GO:0016573)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
7.1	21.2	GO:0098855	HCN channel complex(GO:0098855)
6.4	51.2	GO:0098831	presynaptic active zone cytoplasmic component(GO:0098831)
4.0	15.8	GO:1990761	growth cone lamellipodium(GO:1990761) growth cone filopodium(GO:1990812)
3.8	22.5	GO:0035189	Rb-E2F complex(GO:0035189)
2.9	129.9	GO:0044295	axonal growth cone(GO:0044295)
2.0	13.8	GO:0044305	calyx of Held(GO:0044305)
2.0	11.8	GO:0032983	kainate selective glutamate receptor complex(GO:0032983)
1.5	3.0	GO:0098888	extrinsic component of presynaptic membrane(GO:0098888)
1.5	15.2	GO:0008091	spectrin(GO:0008091) cuticular plate(GO:0032437)
1.2	7.5	GO:0048237	rough endoplasmic reticulum lumen(GO:0048237)
1.2	10.5	GO:0031313	extrinsic component of endosome membrane(GO:0031313)
1.1	25.5	GO:1902711	GABA-A receptor complex(GO:1902711)
1.1	4.4	GO:0070876	SOSS complex(GO:0070876)
1.0	4.0	GO:0031592	centrosomal corona(GO:0031592)
1.0	45.2	GO:0046658	anchored component of plasma membrane(GO:0046658)
1.0	7.8	GO:0048787	presynaptic active zone membrane(GO:0048787)
0.9	11.5	GO:0000124	SAGA complex(GO:0000124)
0.6	1.8	GO:1990423	RZZ complex(GO:1990423)
0.6	6.9	GO:1990454	L-type voltage-gated calcium channel complex(GO:1990454)
0.5	2.4	GO:0002189	ribose phosphate diphosphokinase complex(GO:0002189)
0.4	6.4	GO:0005916	fascia adherens(GO:0005916)
0.4	1.5	GO:0043564	Ku70:Ku80 complex(GO:0043564)
0.4	0.7	GO:1990836	lysosomal matrix(GO:1990836)
0.3	81.1	GO:0045211	postsynaptic membrane(GO:0045211)
0.3	24.0	GO:0044291	cell-cell contact zone(GO:0044291)
0.3	19.9	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)
0.3	19.8	GO:0031902	late endosome membrane(GO:0031902)
0.2	2.9	GO:0097431	mitotic spindle pole(GO:0097431)
0.2	34.2	GO:0043679	axon terminus(GO:0043679)
0.2	1.5	GO:0033276	transcription factor TFTC complex(GO:0033276)
0.2	120.3	GO:0045202	synapse(GO:0045202)
0.2	18.5	GO:0016323	basolateral plasma membrane(GO:0016323)
0.2	16.2	GO:0030672	synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501)
0.2	2.7	GO:0071565	nBAF complex(GO:0071565)
0.1	5.9	GO:0016529	sarcoplasmic reticulum(GO:0016529)
0.1	1.4	GO:0032433	filopodium tip(GO:0032433)
0.1	20.0	GO:0005802	trans-Golgi network(GO:0005802)
0.1	27.5	GO:0043235	receptor complex(GO:0043235)
0.1	7.9	GO:0005758	mitochondrial intermembrane space(GO:0005758)
0.1	2.7	GO:0032391	photoreceptor connecting cilium(GO:0032391)
0.1	4.2	GO:0045171	intercellular bridge(GO:0045171)
0.1	1.6	GO:0010369	chromocenter(GO:0010369)
0.1	2.3	GO:0008180	COP9 signalosome(GO:0008180)
0.1	9.7	GO:0030027	lamellipodium(GO:0030027)
0.1	56.2	GO:0005887	integral component of plasma membrane(GO:0005887)
0.1	3.8	GO:0005791	rough endoplasmic reticulum(GO:0005791)
0.1	4.9	GO:0030427	site of polarized growth(GO:0030427)
0.0	4.2	GO:0097014	axoneme(GO:0005930) ciliary plasm(GO:0097014)
0.0	6.9	GO:0043209	myelin sheath(GO:0043209)
0.0	4.3	GO:0016363	nuclear matrix(GO:0016363)
0.0	0.8	GO:0000145	exocyst(GO:0000145)
0.0	3.5	GO:0072562	blood microparticle(GO:0072562)
0.0	3.5	GO:0000786	nucleosome(GO:0000786)
0.0	2.6	GO:0005923	bicellular tight junction(GO:0005923)
0.0	0.1	GO:0008290	F-actin capping protein complex(GO:0008290)
0.0	11.4	GO:0005813	centrosome(GO:0005813)
0.0	4.8	GO:0005578	proteinaceous extracellular matrix(GO:0005578)
0.0	0.4	GO:0005801	cis-Golgi network(GO:0005801)
0.0	4.4	GO:0000139	Golgi membrane(GO:0000139)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.1	25.5	GO:0008503	benzodiazepine receptor activity(GO:0008503)
4.3	34.3	GO:0044323	retinoic acid-responsive element binding(GO:0044323)
4.2	21.0	GO:0004105	choline-phosphate cytidylyltransferase activity(GO:0004105)
3.8	11.5	GO:0022852	glycine-gated chloride ion channel activity(GO:0022852)
3.6	71.5	GO:0005003	ephrin receptor activity(GO:0005003)
2.8	13.8	GO:0022841	potassium ion leak channel activity(GO:0022841)
2.6	31.7	GO:0008191	metalloendopeptidase inhibitor activity(GO:0008191)
2.4	30.8	GO:0070097	alpha-catenin binding(GO:0045294) delta-catenin binding(GO:0070097)
2.4	23.7	GO:0003680	AT DNA binding(GO:0003680)
2.3	9.1	GO:0005006	epidermal growth factor-activated receptor activity(GO:0005006)
2.1	21.2	GO:0005222	intracellular cAMP activated cation channel activity(GO:0005222)
2.0	11.9	GO:0001517	N-acetylglucosamine 6-O-sulfotransferase activity(GO:0001517)
1.9	7.8	GO:0060072	large conductance calcium-activated potassium channel activity(GO:0060072)
1.7	11.8	GO:0015277	kainate selective glutamate receptor activity(GO:0015277)
1.6	9.8	GO:0061578	Lys63-specific deubiquitinase activity(GO:0061578)
1.5	7.7	GO:0050833	pyruvate transmembrane transporter activity(GO:0050833)
1.4	30.6	GO:0030676	Rac guanyl-nucleotide exchange factor activity(GO:0030676)
1.3	5.3	GO:0035514	DNA demethylase activity(GO:0035514) oxidative RNA demethylase activity(GO:0035515)
1.2	3.6	GO:0003845	11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845)
1.2	4.7	GO:0016802	adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
1.1	6.9	GO:0086059	voltage-gated calcium channel activity involved SA node cell action potential(GO:0086059)
1.1	14.1	GO:0019841	retinol binding(GO:0019841)
1.0	12.9	GO:0015187	sodium:amino acid symporter activity(GO:0005283) glycine transmembrane transporter activity(GO:0015187)
0.9	3.5	GO:0030294	receptor signaling protein tyrosine kinase inhibitor activity(GO:0030294)
0.8	2.5	GO:0047757	chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.8	15.8	GO:0048156	tau protein binding(GO:0048156)
0.7	21.3	GO:0004693	cyclin-dependent protein serine/threonine kinase activity(GO:0004693)
0.7	6.5	GO:0086080	protein binding involved in heterotypic cell-cell adhesion(GO:0086080)
0.7	90.5	GO:0005262	calcium channel activity(GO:0005262)
0.7	13.5	GO:0036312	phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
0.7	3.3	GO:0009019	tRNA (guanine-N1-)-methyltransferase activity(GO:0009019)
0.6	1.9	GO:0004946	bombesin receptor activity(GO:0004946)
0.6	2.5	GO:0022833	mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.6	8.0	GO:0045499	chemorepellent activity(GO:0045499)
0.6	3.0	GO:0035615	clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.5	2.6	GO:0004886	9-cis retinoic acid receptor activity(GO:0004886)
0.5	10.8	GO:0034236	protein kinase A catalytic subunit binding(GO:0034236)
0.5	17.5	GO:0046875	ephrin receptor binding(GO:0046875)
0.5	8.2	GO:0005522	profilin binding(GO:0005522)
0.4	34.2	GO:0048306	calcium-dependent protein binding(GO:0048306)
0.4	4.0	GO:0043515	kinetochore binding(GO:0043515)
0.4	7.2	GO:0048018	receptor agonist activity(GO:0048018)
0.4	10.5	GO:0005545	1-phosphatidylinositol binding(GO:0005545)
0.4	52.8	GO:0017124	SH3 domain binding(GO:0017124)
0.4	6.3	GO:0001618	virus receptor activity(GO:0001618)
0.4	22.8	GO:0030276	clathrin binding(GO:0030276)
0.4	6.2	GO:0008195	phosphatidate phosphatase activity(GO:0008195)
0.4	7.9	GO:0004198	calcium-dependent cysteine-type endopeptidase activity(GO:0004198)
0.3	15.6	GO:0030507	spectrin binding(GO:0030507)
0.3	7.5	GO:0001871	pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.3	13.1	GO:0048487	beta-tubulin binding(GO:0048487)
0.3	2.0	GO:0045545	syndecan binding(GO:0045545)
0.3	6.7	GO:0008171	O-methyltransferase activity(GO:0008171)
0.3	4.3	GO:0017151	DEAD/H-box RNA helicase binding(GO:0017151)
0.3	31.8	GO:0008081	phosphoric diester hydrolase activity(GO:0008081)
0.3	1.7	GO:0051185	coenzyme transporter activity(GO:0051185)
0.3	2.4	GO:0004749	ribose phosphate diphosphokinase activity(GO:0004749)
0.2	6.7	GO:0031435	mitogen-activated protein kinase kinase kinase binding(GO:0031435)
0.2	9.9	GO:0030374	ligand-dependent nuclear receptor transcription coactivator activity(GO:0030374)
0.2	0.7	GO:0031686	A1 adenosine receptor binding(GO:0031686)
0.2	6.4	GO:0045309	protein phosphorylated amino acid binding(GO:0045309)
0.2	3.4	GO:0071837	HMG box domain binding(GO:0071837)
0.1	0.7	GO:0001032	transcription factor activity, RNA polymerase III transcription factor binding(GO:0001007) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.1	4.2	GO:0003785	actin monomer binding(GO:0003785)
0.1	1.4	GO:0008432	JUN kinase binding(GO:0008432)
0.1	7.2	GO:0005160	transforming growth factor beta receptor binding(GO:0005160)
0.1	3.2	GO:0071889	14-3-3 protein binding(GO:0071889)
0.1	3.4	GO:0003951	NAD+ kinase activity(GO:0003951)
0.1	1.4	GO:0034450	ubiquitin-ubiquitin ligase activity(GO:0034450)
0.1	3.5	GO:0003755	peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1	10.4	GO:0005261	cation channel activity(GO:0005261)
0.1	1.8	GO:0030371	translation repressor activity(GO:0030371)
0.1	2.3	GO:0048365	Rac GTPase binding(GO:0048365)
0.1	0.3	GO:0008143	poly(A) binding(GO:0008143)
0.1	11.5	GO:0003729	mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.1	1.1	GO:0043395	heparan sulfate proteoglycan binding(GO:0043395)
0.0	0.8	GO:0017160	Ral GTPase binding(GO:0017160)
0.0	0.7	GO:0005161	platelet-derived growth factor receptor binding(GO:0005161)
0.0	0.5	GO:0033038	bitter taste receptor activity(GO:0033038)
0.0	1.8	GO:0004402	histone acetyltransferase activity(GO:0004402)
0.0	1.3	GO:0008188	neuropeptide receptor activity(GO:0008188)
0.0	0.7	GO:0005520	insulin-like growth factor binding(GO:0005520)
0.0	3.1	GO:0030165	PDZ domain binding(GO:0030165)
0.0	2.9	GO:0005516	calmodulin binding(GO:0005516)
0.0	2.7	GO:0003713	transcription coactivator activity(GO:0003713)
0.0	5.3	GO:0030246	carbohydrate binding(GO:0030246)
0.0	8.9	GO:0046983	protein dimerization activity(GO:0046983)
0.0	27.4	GO:0042802	identical protein binding(GO:0042802)
0.0	5.8	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.0	2.3	GO:0005096	GTPase activator activity(GO:0005096)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.1	88.9	PID EPHA FWDPATHWAY	EPHA forward signaling
1.6	30.6	PID ARF6 DOWNSTREAM PATHWAY	Arf6 downstream pathway
1.2	20.4	SA REG CASCADE OF CYCLIN EXPR	Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.5	26.2	NABA BASEMENT MEMBRANES	Genes encoding structural components of basement membranes
0.5	9.1	PID ERBB NETWORK PATHWAY	ErbB receptor signaling network
0.5	19.9	PID ECADHERIN STABILIZATION PATHWAY	Stabilization and expansion of the E-cadherin adherens junction
0.4	7.5	PID INTEGRIN5 PATHWAY	Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.3	11.0	ST WNT BETA CATENIN PATHWAY	Wnt/beta-catenin Pathway
0.3	25.2	PID CDC42 PATHWAY	CDC42 signaling events
0.3	13.4	NABA PROTEOGLYCANS	Genes encoding proteoglycans
0.3	16.9	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.3	9.7	ST DIFFERENTIATION PATHWAY IN PC12 CELLS	Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.1	3.0	PID ERBB1 INTERNALIZATION PATHWAY	Internalization of ErbB1
0.1	5.5	PID BMP PATHWAY	BMP receptor signaling
0.1	2.6	PID WNT SIGNALING PATHWAY	Wnt signaling network
0.1	2.6	PID A6B1 A6B4 INTEGRIN PATHWAY	a6b1 and a6b4 Integrin signaling
0.1	2.3	PID ERBB2 ERBB3 PATHWAY	ErbB2/ErbB3 signaling events
0.1	8.6	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.0	14.6	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.0	3.3	PID ERA GENOMIC PATHWAY	Validated nuclear estrogen receptor alpha network
0.0	0.8	PID INSULIN PATHWAY	Insulin Pathway
0.0	0.2	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.0	0.7	PID CMYB PATHWAY	C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.5	67.4	REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE	Genes involved in Dopamine Neurotransmitter Release Cycle
2.4	38.8	REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS	Genes involved in Ionotropic activity of Kainate Receptors
1.6	44.5	REACTOME ADHERENS JUNCTIONS INTERACTIONS	Genes involved in Adherens junctions interactions
1.6	23.7	REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP	Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
1.5	25.5	REACTOME GABA A RECEPTOR ACTIVATION	Genes involved in GABA A receptor activation
1.3	22.5	REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1	Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
1.1	27.2	REACTOME SYNTHESIS OF PC	Genes involved in Synthesis of PC
1.1	13.8	REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS	Genes involved in Tandem pore domain potassium channels
1.0	11.5	REACTOME LIGAND GATED ION CHANNEL TRANSPORT	Genes involved in Ligand-gated ion channel transport
0.6	12.9	REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS	Genes involved in Na+/Cl- dependent neurotransmitter transporters
0.6	7.7	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters
0.5	15.2	REACTOME NEPHRIN INTERACTIONS	Genes involved in Nephrin interactions
0.5	9.1	REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING	Genes involved in Downregulation of ERBB2:ERBB3 signaling
0.5	30.6	REACTOME NRAGE SIGNALS DEATH THROUGH JNK	Genes involved in NRAGE signals death through JNK
0.3	8.2	REACTOME GENERATION OF SECOND MESSENGER MOLECULES	Genes involved in Generation of second messenger molecules
0.3	6.4	REACTOME PROLACTIN RECEPTOR SIGNALING	Genes involved in Prolactin receptor signaling
0.3	6.9	REACTOME ACTIVATION OF KAINATE RECEPTORS UPON GLUTAMATE BINDING	Genes involved in Activation of Kainate Receptors upon glutamate binding
0.2	2.9	REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS	Genes involved in p130Cas linkage to MAPK signaling for integrins
0.1	3.0	REACTOME EGFR DOWNREGULATION	Genes involved in EGFR downregulation
0.1	4.0	REACTOME SIGNALING BY ROBO RECEPTOR	Genes involved in Signaling by Robo receptor
0.1	7.5	REACTOME INTEGRIN CELL SURFACE INTERACTIONS	Genes involved in Integrin cell surface interactions
0.1	7.2	REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS	Genes involved in Class B/2 (Secretin family receptors)
0.1	2.7	REACTOME KERATAN SULFATE BIOSYNTHESIS	Genes involved in Keratan sulfate biosynthesis
0.1	0.7	REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION	Genes involved in GABA synthesis, release, reuptake and degradation
0.1	1.1	REACTOME HS GAG DEGRADATION	Genes involved in HS-GAG degradation
0.0	1.7	REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES	Genes involved in Transport of vitamins, nucleosides, and related molecules
0.0	1.4	REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING	Genes involved in Negative regulators of RIG-I/MDA5 signaling
0.0	0.8	REACTOME INSULIN SYNTHESIS AND PROCESSING	Genes involved in Insulin Synthesis and Processing
0.0	1.5	REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING	Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0	0.7	REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER	Genes involved in RNA Polymerase III Transcription Initiation From Type 3 Promoter
0.0	0.7	REACTOME SIGNALING BY PDGF	Genes involved in Signaling by PDGF