rn6_v1_chr20_+_26999795_26999795	53.5009	Hoxc9	ENSRNOT00000057872|Mypn|ENSRNOG00000000383|myopalladin [Source:RGD Symbol%3BAcc:1308510]
rn6_v1_chr7_-_29171783_29171783	50.677	Hoxc9	ENSRNOT00000079235|Mybpc1|ENSRNOG00000056493|myosin binding protein C%2C slow type [Source:RGD Symbol%3BAcc:735102]
rn6_v1_chr19_+_50848736_50848736	45.0353	Hoxc9	ENSRNOT00000077053|Cdh13|ENSRNOG00000014371|cadherin 13 [Source:RGD Symbol%3BAcc:619745]
rn6_v1_chr10_-_8498422_8498422	43.9884	Hoxc9	ENSRNOT00000082332|Rbfox1|ENSRNOG00000002827|RNA binding protein%2C fox-1 homolog 1 [Source:RGD Symbol%3BAcc:1311210]
rn6_v1_chr17_-_78735324_78735324	37.7129	Hoxc9	ENSRNOT00000036299|Cdnf|ENSRNOG00000026493|cerebral dopamine neurotrophic factor [Source:RGD Symbol%3BAcc:1307600]
rn6_v1_chr1_-_215838209_215838209	37.6848	Hoxc9	ENSRNOT00000050760|Igf2|ENSRNOG00000020369|insulin-like growth factor 2 [Source:RGD Symbol%3BAcc:2870]
rn6_v1_chr1_+_167870452_167870452	34.3212	Hoxc9	ENSRNOT00000025027|Olr63|ENSRNOG00000018551|olfactory receptor 63 [Source:RGD Symbol%3BAcc:1332833]
rn6_v1_chr8_+_64481172_64481172	34.1112	Hoxc9	ENSRNOT00000015332|Pkm|ENSRNOG00000011329|pyruvate kinase%2C muscle [Source:RGD Symbol%3BAcc:3337]
rn6_v1_chr13_+_106463368_106463368	32.3692	Hoxc9	ENSRNOT00000003489|Esrrg|ENSRNOG00000002593|estrogen-related receptor gamma [Source:RGD Symbol%3BAcc:1303236]
rn6_v1_chr7_-_130120579_130120579	31.887	Hoxc9	ENSRNOT00000044376|Mapk12|ENSRNOG00000031233|mitogen-activated protein kinase 12 [Source:RGD Symbol%3BAcc:70975]
rn6_v1_chrX_-_142248369_142248369	27.9302	Hoxc9	ENSRNOT00000091330|Fgf13|ENSRNOG00000042753|fibroblast growth factor 13 [Source:RGD Symbol%3BAcc:620164]
rn6_v1_chr8_+_119228612_119228730	27.3951	Hoxc9	ENSRNOT00000078439|Lrrc2|ENSRNOG00000030688|leucine rich repeat containing 2 [Source:RGD Symbol%3BAcc:1311716]	ENSRNOT00000043737|Lrrc2|ENSRNOG00000030688|leucine rich repeat containing 2 [Source:RGD Symbol%3BAcc:1311716]
rn6_v1_chr3_-_23020441_23020441	25.7269	Hoxc9	ENSRNOT00000017651|Nr5a1|ENSRNOG00000012682|nuclear receptor subfamily 5%2C group A%2C member 1 [Source:RGD Symbol%3BAcc:68350]
rn6_v1_chr12_+_27155587_27155587	22.0636	Hoxc9	ENSRNOT00000044800|AABR07035916.1|ENSRNOG00000034287|
rn6_v1_chr20_-_25826658_25826658	21.0818	Hoxc9	ENSRNOT00000057950|Ctnna3|ENSRNOG00000000373|catenin alpha 3 [Source:RGD Symbol%3BAcc:1562230]	ENSRNOT00000084660|Ctnna3|ENSRNOG00000000373|catenin alpha 3 [Source:RGD Symbol%3BAcc:1562230]
rn6_v1_chr1_+_201055644_201055644	20.9828	Hoxc9	ENSRNOT00000054937|Tacc2|ENSRNOG00000020457|transforming%2C acidic coiled-coil containing protein 2 [Source:RGD Symbol%3BAcc:1303004]	ENSRNOT00000047161|Tacc2|ENSRNOG00000020457|transforming%2C acidic coiled-coil containing protein 2 [Source:RGD Symbol%3BAcc:1303004]
rn6_v1_chr16_+_8207223_8207223	18.7409	Hoxc9	ENSRNOT00000026751|Oxnad1|ENSRNOG00000019760|oxidoreductase NAD-binding domain containing 1 [Source:RGD Symbol%3BAcc:1311534]
rn6_v1_chr16_+_22361998_22361998	18.6993	Hoxc9	ENSRNOT00000016193|Slc18a1|ENSRNOG00000011992|solute carrier family 18 member A1 [Source:RGD Symbol%3BAcc:3693]
rn6_v1_chrX_+_119390013_119390013	18.5934	Hoxc9	ENSRNOT00000074269|Agtr2|ENSRNOG00000050006|angiotensin II receptor%2C type 2 [Source:RGD Symbol%3BAcc:2072]
rn6_v1_chr13_-_36290531_36290531	18.4372	Hoxc9	ENSRNOT00000071388|Steap3|ENSRNOG00000049471|STEAP3 metalloreductase [Source:RGD Symbol%3BAcc:708552]
rn6_v1_chrX_+_136460215_136460215	17.021	Hoxc9	ENSRNOT00000093538|Arhgap36|ENSRNOG00000007552|Rho GTPase activating protein 36 [Source:RGD Symbol%3BAcc:1565967]
rn6_v1_chr8_+_130350510_130350510	16.4517	Hoxc9	ENSRNOT00000073376|Ss18l2|ENSRNOG00000047853|SS18 like 2 [Source:RGD Symbol%3BAcc:1590139]
rn6_v1_chr19_-_37427989_37427989	15.3186	Hoxc9	ENSRNOT00000022863|Tppp3|ENSRNOG00000016890|tubulin polymerization-promoting protein family member 3 [Source:RGD Symbol%3BAcc:1305061]
rn6_v1_chr1_-_56683731_56683731	15.1399	Hoxc9	ENSRNOT00000014552|Thbs2|ENSRNOG00000010529|thrombospondin 2 [Source:RGD Symbol%3BAcc:1310979]
rn6_v1_chr18_+_61261418_61261418	14.7088	Hoxc9	ENSRNOT00000064250|Zfp532|ENSRNOG00000017116|zinc finger protein 532 [Source:RGD Symbol%3BAcc:1311719]
rn6_v1_chr10_-_85974644_85974651	13.8795	Hoxc9	ENSRNOT00000006098|Cacnb1|ENSRNOG00000004518|calcium voltage-gated channel auxiliary subunit beta 1 [Source:RGD Symbol%3BAcc:68382]	ENSRNOT00000082974|Cacnb1|ENSRNOG00000004518|calcium voltage-gated channel auxiliary subunit beta 1 [Source:RGD Symbol%3BAcc:68382]
rn6_v1_chr2_+_233602732_233602732	13.1029	Hoxc9	ENSRNOT00000044232|Pitx2|ENSRNOG00000010681|paired-like homeodomain 2 [Source:RGD Symbol%3BAcc:3331]
rn6_v1_chr2_-_96032722_96032722	12.9511	Hoxc9	ENSRNOT00000015746|LOC100360846|ENSRNOG00000011827|proteasome subunit beta type 6-like [Source:RGD Symbol%3BAcc:2321312]
rn6_v1_chr7_+_123578878_123578878	12.2002	Hoxc9	ENSRNOT00000011316|Smdt1|ENSRNOG00000008461|single-pass membrane protein with aspartate-rich tail 1 [Source:RGD Symbol%3BAcc:1311310]
rn6_v1_chr8_+_36625733_36625733	11.1077	Hoxc9	ENSRNOT00000016248|Cdon|ENSRNOG00000011789|cell adhesion associated%2C oncogene regulated [Source:RGD Symbol%3BAcc:708433]
rn6_v1_chr1_+_201620642_201620642	10.8784	Hoxc9	ENSRNOT00000093674|Dmbt1|ENSRNOG00000020560|deleted in malignant brain tumors 1 [Source:RGD Symbol%3BAcc:61984]
rn6_v1_chr9_-_52238564_52238564	8.76076	Hoxc9	ENSRNOT00000005073|Col5a2|ENSRNOG00000003736|collagen type V alpha 2 chain [Source:RGD Symbol%3BAcc:70921]
rn6_v1_chr3_+_14889510_14889510	8.67671	Hoxc9	ENSRNOT00000080760|Dab2ip|ENSRNOG00000055226|DAB2 interacting protein [Source:RGD Symbol%3BAcc:621686]
rn6_v1_chr11_-_60679555_60679555	8.46399	Hoxc9	ENSRNOT00000059735|Ccdc80|ENSRNOG00000002052|coiled-coil domain containing 80 [Source:RGD Symbol%3BAcc:69421]
rn6_v1_chr15_+_34234755_34234755	7.58768	Hoxc9	ENSRNOT00000059987|Dcaf11|ENSRNOG00000018825|DDB1 and CUL4 associated factor 11 [Source:RGD Symbol%3BAcc:1311288]
rn6_v1_chr15_+_34234193_34234193	7.27534	Hoxc9	ENSRNOT00000077584|Dcaf11|ENSRNOG00000018825|DDB1 and CUL4 associated factor 11 [Source:RGD Symbol%3BAcc:1311288]
rn6_v1_chr1_+_41323194_41323194	6.679	Hoxc9	ENSRNOT00000026350|Esr1|ENSRNOG00000019358|estrogen receptor 1 [Source:RGD Symbol%3BAcc:2581]
rn6_v1_chr6_-_25507073_25507073	6.06221	Hoxc9	ENSRNOT00000061176|Plb1|ENSRNOG00000026037|phospholipase B1 [Source:RGD Symbol%3BAcc:621565]
rn6_v1_chr1_-_7480825_7480825	5.02427	Hoxc9	ENSRNOT00000048754|Phactr2|ENSRNOG00000015473|phosphatase and actin regulator 2 [Source:RGD Symbol%3BAcc:1303141]
rn6_v1_chr6_-_123577695_123577695	4.78519	Hoxc9	ENSRNOT00000006604|Foxn3|ENSRNOG00000004709|forkhead box N3 [Source:RGD Symbol%3BAcc:1305711]
rn6_v1_chr1_+_79754587_79754587	4.62612	Hoxc9	ENSRNOT00000083211|Micb|ENSRNOG00000057645|MHC class I polypeptide-related sequence B [Source:RGD Symbol%3BAcc:1564508]
rn6_v1_chr3_-_103128243_103128243	4.26165	Hoxc9	ENSRNOT00000046310|Olr779|ENSRNOG00000050125|olfactory receptor 779 [Source:RGD Symbol%3BAcc:1333499]
rn6_v1_chr3_-_103400272_103400272	4.05456	Hoxc9	ENSRNOT00000046527|Olr790|ENSRNOG00000050791|olfactory receptor 790 [Source:RGD Symbol%3BAcc:1332772]
rn6_v1_chr5_+_154489590_154489590	4.02322	Hoxc9	ENSRNOT00000035788|Id3|ENSRNOG00000026124|inhibitor of DNA binding 3%2C HLH protein [Source:RGD Symbol%3BAcc:2860]
rn6_v1_chr10_+_103874383_103874383	3.95569	Hoxc9	ENSRNOT00000038935|Otop2|ENSRNOG00000028121|otopetrin 2 [Source:RGD Symbol%3BAcc:1304830]
rn6_v1_chr18_-_24823837_24823858	3.3802	Hoxc9	ENSRNOT00000021405|Myo7b|ENSRNOG00000015035|myosin VIIb [Source:RGD Symbol%3BAcc:1561153]	ENSRNOT00000090390|Myo7b|ENSRNOG00000015035|myosin VIIb [Source:RGD Symbol%3BAcc:1561153]
rn6_v1_chr1_-_140860882_140860894	3.2484	Hoxc9	ENSRNOT00000067889|Mfge8|ENSRNOG00000017510|milk fat globule-EGF factor 8 protein [Source:RGD Symbol%3BAcc:3083]	ENSRNOT00000024253|Mfge8|ENSRNOG00000017510|milk fat globule-EGF factor 8 protein [Source:RGD Symbol%3BAcc:3083]	ENSRNOT00000079100|Mfge8|ENSRNOG00000017510|milk fat globule-EGF factor 8 protein [Source:RGD Symbol%3BAcc:3083]
rn6_v1_chr3_-_103447716_103447716	3.08705	Hoxc9	ENSRNOT00000074196|Olr791|ENSRNOG00000045900|olfactory receptor 791 [Source:RGD Symbol%3BAcc:1334294]
rn6_v1_chr5_-_128839433_128839433	3.03675	Hoxc9	ENSRNOT00000065280|Osbpl9|ENSRNOG00000033593|oxysterol binding protein-like 9 [Source:RGD Symbol%3BAcc:1311508]
rn6_v1_chr3_-_103152122_103152122	3.01664	Hoxc9	ENSRNOT00000045743|Olr781|ENSRNOG00000048229|olfactory receptor 781 [Source:RGD Symbol%3BAcc:1334408]
rn6_v1_chr2_+_23257915_23257915	2.95909	Hoxc9	ENSRNOT00000080942|AABR07007675.1|ENSRNOG00000058886|
rn6_v1_chrX_+_15113878_15113878	2.94254	Hoxc9	ENSRNOT00000007464|Wdr13|ENSRNOG00000039587|WD repeat domain 13 [Source:RGD Symbol%3BAcc:1560982]
rn6_v1_chr15_-_36321572_36321572	2.88728	Hoxc9	ENSRNOT00000073934|AABR07018016.1|ENSRNOG00000049726|
rn6_v1_chr13_-_61306939_61306939	2.87505	Hoxc9	ENSRNOT00000086610|Rgs21|ENSRNOG00000056369|regulator of G-protein signaling 21 [Source:RGD Symbol%3BAcc:2320695]
rn6_v1_chr3_-_103485806_103485806	2.71439	Hoxc9	ENSRNOT00000072524|Olr789|ENSRNOG00000046043|olfactory receptor 789 [Source:RGD Symbol%3BAcc:1332602]
rn6_v1_chr2_-_236149971_236149971	2.32834	Hoxc9	ENSRNOT00000089472|AABR07013412.1|ENSRNOG00000055035|
rn6_v1_chr4_-_119399130_119399130	2.26783	Hoxc9	ENSRNOT00000042796|Vom1r101|ENSRNOG00000029263|vomeronasal 1 receptor 101 [Source:RGD Symbol%3BAcc:708395]
rn6_v1_chr8_-_63291966_63291966	2.145	Hoxc9	ENSRNOT00000077762|AABR07070278.1|ENSRNOG00000051681|
rn6_v1_chr6_-_33691301_33691301	2.00396	Hoxc9	ENSRNOT00000008008|Rhob|ENSRNOG00000021403|ras homolog family member B [Source:RGD Symbol%3BAcc:621309]
rn6_v1_chr1_-_200548317_200548317	2.00146	Hoxc9	ENSRNOT00000088610|AABR07005806.1|ENSRNOG00000057653|
rn6_v1_chr1_-_155955173_155955173	1.81641	Hoxc9	ENSRNOT00000079345|AABR07004776.1|ENSRNOG00000051568|
rn6_v1_chr7_+_42304534_42304534	1.58494	Hoxc9	ENSRNOT00000085097|Kitlg|ENSRNOG00000005386|KIT ligand [Source:RGD Symbol%3BAcc:3086]
rn6_v1_chr20_-_27083410_27083410	1.57919	Hoxc9	ENSRNOT00000000432|Atoh7|ENSRNOG00000000384|atonal bHLH transcription factor 7 [Source:RGD Symbol%3BAcc:1304957]
rn6_v1_chr17_+_41798783_41798783	1.3595	Hoxc9	ENSRNOT00000023519|Nrsn1|ENSRNOG00000017444|neurensin 1 [Source:RGD Symbol%3BAcc:1307833]
rn6_v1_chr4_+_133540540_133540540	0.918766	Hoxc9	ENSRNOT00000073232|AABR07061556.1|ENSRNOG00000050475|
rn6_v1_chr2_+_66940057_66940057	0.639498	Hoxc9	ENSRNOT00000043050|Cdh9|ENSRNOG00000033837|cadherin 9 [Source:RGD Symbol%3BAcc:1308343]
rn6_v1_chr11_-_37253776_37253776	0.533058	Hoxc9	ENSRNOT00000002215|Dscam|ENSRNOG00000027992|DS cell adhesion molecule [Source:RGD Symbol%3BAcc:619992]
rn6_v1_chr4_-_18396035_18396035	0.477872	Hoxc9	ENSRNOT00000034692|Sema3a|ENSRNOG00000023337|semaphorin 3A [Source:RGD Symbol%3BAcc:3657]
rn6_v1_chr10_-_88107232_88107232	0.435885	Hoxc9	ENSRNOT00000019330|Krt9|ENSRNOG00000014370|keratin 9 [Source:RGD Symbol%3BAcc:628785]	ENSRNOT00000076770|Krt9|ENSRNOG00000014370|keratin 9 [Source:RGD Symbol%3BAcc:628785]
rn6_v1_chr2_-_140334912_140334912	0.237512	Hoxc9	ENSRNOT00000015067|Elf2|ENSRNOG00000010815|E74-like factor 2 [Source:RGD Symbol%3BAcc:1310585]
rn6_v1_chr2_-_173087648_173087648	0.219435	Hoxc9	ENSRNOT00000091079|Iqcj|ENSRNOG00000060482|IQ motif containing J [Source:MGI Symbol%3BAcc:MGI:3644166]
rn6_v1_chr15_-_27001826_27001826	0.195913	Hoxc9	ENSRNOT00000016693|Olr1608|ENSRNOG00000012522|olfactory receptor 1608 [Source:RGD Symbol%3BAcc:1333964]
rn6_v1_chr4_-_85329362_85329362	0.176675	Hoxc9	ENSRNOT00000014925|Crhr2|ENSRNOG00000011145|corticotropin releasing hormone receptor 2 [Source:RGD Symbol%3BAcc:70547]
