rn6_v1_chr15_-_76789298_76789298	13.39	Nkx2-4	ENSRNOT00000077853|AABR07018857.1|ENSRNOG00000057059|
rn6_v1_chr7_+_136182224_136182224	12.7189	Nkx2-4	ENSRNOT00000008159|Tmem117|ENSRNOG00000006068|transmembrane protein 117 [Source:RGD Symbol%3BAcc:1562562]
rn6_v1_chr14_-_85191557_85191557	10.2085	Nkx2-4	ENSRNOT00000011604|Nefh|ENSRNOG00000008716|neurofilament heavy [Source:RGD Symbol%3BAcc:3159]
rn6_v1_chr15_-_14737704_14737704	9.53912	Nkx2-4	ENSRNOT00000011307|Synpr|ENSRNOG00000008203|synaptoporin [Source:RGD Symbol%3BAcc:708366]
rn6_v1_chr1_-_224698514_224698514	8.80717	Nkx2-4	ENSRNOT00000024234|Slc22a25|ENSRNOG00000017964|solute carrier family 22%2C member 25 [Source:RGD Symbol%3BAcc:621104]
rn6_v1_chr2_+_144861455_144861459	8.71345	Nkx2-4	ENSRNOT00000093284|Dclk1|ENSRNOG00000032922|doublecortin-like kinase 1 [Source:RGD Symbol%3BAcc:68437]	ENSRNOT00000019748|Dclk1|ENSRNOG00000032922|doublecortin-like kinase 1 [Source:RGD Symbol%3BAcc:68437]	ENSRNOT00000072110|Dclk1|ENSRNOG00000032922|doublecortin-like kinase 1 [Source:RGD Symbol%3BAcc:68437]
rn6_v1_chr2_-_235177275_235177275	8.05613	Nkx2-4	ENSRNOT00000093153|LOC103691699|ENSRNOG00000051964|uncharacterized LOC103691699 [Source:RGD Symbol%3BAcc:9170085]
rn6_v1_chr4_+_64088900_64088900	7.56967	Nkx2-4	ENSRNOT00000075341|Chrm2|ENSRNOG00000046972|cholinergic receptor%2C muscarinic 2 [Source:RGD Symbol%3BAcc:620023]
rn6_v1_chr5_+_149077412_149077412	7.5123	Nkx2-4	ENSRNOT00000014666|Matn1|ENSRNOG00000010932|matrilin 1%2C cartilage matrix protein [Source:RGD Symbol%3BAcc:1359410]
rn6_v1_chr2_+_68820615_68820631	7.50937	Nkx2-4	ENSRNOT00000087007|Egf|ENSRNOG00000053979|epidermal growth factor [Source:RGD Symbol%3BAcc:2542]	ENSRNOT00000089504|Egf|ENSRNOG00000053979|epidermal growth factor [Source:RGD Symbol%3BAcc:2542]
rn6_v1_chr2_+_68821004_68821004	7.43467	Nkx2-4	ENSRNOT00000083713|Egf|ENSRNOG00000053979|epidermal growth factor [Source:RGD Symbol%3BAcc:2542]
rn6_v1_chr9_+_47281961_47281961	7.03845	Nkx2-4	ENSRNOT00000065234|Slc9a4|ENSRNOG00000015306|solute carrier family 9 member A4 [Source:RGD Symbol%3BAcc:3721]
rn6_v1_chr9_-_28732919_28732919	6.56283	Nkx2-4	ENSRNOT00000083915|Rims1|ENSRNOG00000011000|regulating synaptic membrane exocytosis 1 [Source:RGD Symbol%3BAcc:620000]
rn6_v1_chr17_-_61332391_61332391	6.46026	Nkx2-4	ENSRNOT00000034599|LOC100362965|ENSRNOG00000022595|SNRPN upstream reading frame protein-like [Source:RGD Symbol%3BAcc:2323728]
rn6_v1_chr7_+_123510804_123510804	6.3781	Nkx2-4	ENSRNOT00000010491|Sept3|ENSRNOG00000007686|septin 3 [Source:RGD Symbol%3BAcc:621745]
rn6_v1_chr6_+_43001948_43001948	6.26805	Nkx2-4	ENSRNOT00000007374|Hpcal1|ENSRNOG00000005492|hippocalcin-like 1 [Source:RGD Symbol%3BAcc:708375]
rn6_v1_chr14_+_113867209_113867209	6.09868	Nkx2-4	ENSRNOT00000067591|Ccdc88a|ENSRNOG00000004057|coiled coil domain containing 88A [Source:RGD Symbol%3BAcc:1306694]
rn6_v1_chr4_-_49422824_49422824	5.93309	Nkx2-4	ENSRNOT00000077889|Fam3c|ENSRNOG00000060349|family with sequence similarity 3%2C member C [Source:RGD Symbol%3BAcc:735193]
rn6_v1_chr18_+_29972808_29972808	5.54441	Nkx2-4	ENSRNOT00000074051|Pcdha4|ENSRNOG00000047174|protocadherin alpha 4 [Source:RGD Symbol%3BAcc:620337]
rn6_v1_chr1_+_100161872_100161872	5.35303	Nkx2-4	ENSRNOT00000025777|Klk1c3|ENSRNOG00000033414|kallikrein 1-related peptidase C3 [Source:RGD Symbol%3BAcc:735032]
rn6_v1_chr18_+_29993361_29993361	4.74762	Nkx2-4	ENSRNOT00000075810|Pcdha4|ENSRNOG00000020119|protocadherin alpha 4 [Source:RGD Symbol%3BAcc:620337]
rn6_v1_chr1_-_100671074_100671074	4.73072	Nkx2-4	ENSRNOT00000027132|Myh14|ENSRNOG00000020014|myosin heavy chain 14 [Source:RGD Symbol%3BAcc:1306821]
rn6_v1_chr16_-_82099991_82099991	4.14745	Nkx2-4	ENSRNOT00000089447|Atp11a|ENSRNOG00000017154|ATPase phospholipid transporting 11A [Source:RGD Symbol%3BAcc:1308688]
rn6_v1_chr14_-_14390699_14390699	4.14309	Nkx2-4	ENSRNOT00000046639|Anxa3|ENSRNOG00000002045|annexin A3 [Source:RGD Symbol%3BAcc:2119]
rn6_v1_chr16_-_55132191_55132191	4.06105	Nkx2-4	ENSRNOT00000017025|Micu3|ENSRNOG00000012767|mitochondrial calcium uptake family%2C member 3 [Source:RGD Symbol%3BAcc:1563411]
rn6_v1_chr9_+_82596355_82596355	3.80334	Nkx2-4	ENSRNOT00000065076|Speg|ENSRNOG00000019850|SPEG complex locus [Source:RGD Symbol%3BAcc:2124]
rn6_v1_chr5_+_78384444_78384444	3.44209	Nkx2-4	ENSRNOT00000034978|LOC500475|ENSRNOG00000024506|similar to hypothetical protein 4933430I17 [Source:RGD Symbol%3BAcc:1563460]
rn6_v1_chr1_+_101688297_101688297	3.32712	Nkx2-4	ENSRNOT00000091606|Dbp|ENSRNOG00000021027|D-box binding PAR bZIP transcription factor [Source:RGD Symbol%3BAcc:2491]
rn6_v1_chr8_-_55162421_55162421	3.16509	Nkx2-4	ENSRNOT00000083102|Dixdc1|ENSRNOG00000010260|DIX domain containing 1 [Source:RGD Symbol%3BAcc:1309902]
rn6_v1_chr3_-_9936352_9936405	3.10976	Nkx2-4	ENSRNOT00000011224|Fnbp1|ENSRNOG00000008258|formin binding protein 1 [Source:RGD Symbol%3BAcc:621350]	ENSRNOT00000042798|Fnbp1|ENSRNOG00000008258|formin binding protein 1 [Source:RGD Symbol%3BAcc:621350]
rn6_v1_chr2_+_72006099_72006099	2.92439	Nkx2-4	ENSRNOT00000034044|Cdh12|ENSRNOG00000026392|cadherin 12 [Source:RGD Symbol%3BAcc:1566350]
rn6_v1_chr10_-_66858598_66858598	2.89524	Nkx2-4	ENSRNOT00000018898|Evi2b|ENSRNOG00000014125|ecotropic viral integration site 2B [Source:RGD Symbol%3BAcc:6495961]
rn6_v1_chr4_-_160662974_160662974	2.85671	Nkx2-4	ENSRNOT00000089199|Tspan9|ENSRNOG00000051620|tetraspanin 9 [Source:RGD Symbol%3BAcc:1304740]
rn6_v1_chr2_+_95320283_95320283	2.71403	Nkx2-4	ENSRNOT00000015537|Hey1|ENSRNOG00000011593|hes-related family bHLH transcription factor with YRPW motif 1 [Source:RGD Symbol%3BAcc:621403]
rn6_v1_chr19_-_10358695_10358695	2.68931	Nkx2-4	ENSRNOT00000019770|Katnb1|ENSRNOG00000014626|katanin regulatory subunit B1 [Source:RGD Symbol%3BAcc:1311256]
rn6_v1_chr3_-_141411170_141411170	2.65202	Nkx2-4	ENSRNOT00000017364|Nkx2-2|ENSRNOG00000012728|NK2 homeobox 2 [Source:RGD Symbol%3BAcc:1308443]
rn6_v1_chr8_+_107508351_107508351	2.61272	Nkx2-4	ENSRNOT00000081594|Cep70|ENSRNOG00000022845|centrosomal protein 70 [Source:RGD Symbol%3BAcc:1561486]
rn6_v1_chr15_-_60289763_60289763	2.60686	Nkx2-4	ENSRNOT00000038579|Fam216b|ENSRNOG00000021943|family with sequence similarity 216%2C member B [Source:RGD Symbol%3BAcc:1560137]
rn6_v1_chr4_-_22425381_22425515	2.45056	Nkx2-4	ENSRNOT00000011166|Abcb1a|ENSRNOG00000008012|ATP binding cassette subfamily B member 1A [Source:RGD Symbol%3BAcc:619951]	ENSRNOT00000037712|Abcb1a|ENSRNOG00000008012|ATP binding cassette subfamily B member 1A [Source:RGD Symbol%3BAcc:619951]
rn6_v1_chr4_-_129430251_129430251	2.41066	Nkx2-4	ENSRNOT00000067881|Fam19a4|ENSRNOG00000005830|family with sequence similarity 19 member A4%2C C-C motif chemokine like [Source:RGD Symbol%3BAcc:1597443]
rn6_v1_chr18_-_63394690_63394766	2.32978	Nkx2-4	ENSRNOT00000090078|Cep76|ENSRNOG00000021918|centrosomal protein 76 [Source:RGD Symbol%3BAcc:1305183]	ENSRNOT00000029431|Cep76|ENSRNOG00000021918|centrosomal protein 76 [Source:RGD Symbol%3BAcc:1305183]
rn6_v1_chr3_+_19495628_19495628	2.27682	Nkx2-4	ENSRNOT00000077990|Igkv4-57|ENSRNOG00000052969|immunoglobulin kappa variable 4-57 [Source:MGI Symbol%3BAcc:MGI:2685035]
rn6_v1_chr3_+_2396143_2396143	2.18549	Nkx2-4	ENSRNOT00000012388|Nrarp|ENSRNOG00000009354|Notch-regulated ankyrin repeat protein [Source:RGD Symbol%3BAcc:1591939]
rn6_v1_chr3_-_93216495_93216495	2.08134	Nkx2-4	ENSRNOT00000010580|Ehf|ENSRNOG00000007484|ets homologous factor [Source:RGD Symbol%3BAcc:1310282]
rn6_v1_chr17_-_29895386_29895386	2.05108	Nkx2-4	ENSRNOT00000048757|Cdyl|ENSRNOG00000032215|chromodomain Y-like [Source:RGD Symbol%3BAcc:1549745]
rn6_v1_chr1_-_67134827_67134827	2.01055	Nkx2-4	ENSRNOT00000045214|Vom1r45|ENSRNOG00000028882|vomeronasal 1 receptor 45 [Source:RGD Symbol%3BAcc:1359121]
rn6_v1_chr19_+_57047830_57047830	1.89788	Nkx2-4	ENSRNOT00000080860|Galnt2|ENSRNOG00000019143|polypeptide N-acetylgalactosaminyltransferase 2 [Source:RGD Symbol%3BAcc:1310692]
rn6_v1_chr4_-_155421998_155421998	1.77863	Nkx2-4	ENSRNOT00000041552|Gdf3|ENSRNOG00000015331|growth differentiation factor 3 [Source:RGD Symbol%3BAcc:1564178]
rn6_v1_chr2_+_22910236_22910236	1.77183	Nkx2-4	ENSRNOT00000078266|Homer1|ENSRNOG00000047014|homer scaffolding protein 1 [Source:RGD Symbol%3BAcc:628725]
rn6_v1_chr15_-_14510828_14510828	1.71024	Nkx2-4	ENSRNOT00000039347|Sntn|ENSRNOG00000027383|sentan%2C cilia apical structure protein [Source:RGD Symbol%3BAcc:1562356]
rn6_v1_chr3_+_19690016_19690016	1.69487	Nkx2-4	ENSRNOT00000085460|AABR07051707.1|ENSRNOG00000057618|
rn6_v1_chr14_+_72889038_72889038	1.58536	Nkx2-4	ENSRNOT00000084261|Rab5a|ENSRNOG00000057056|RAB5A%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620936]
rn6_v1_chr16_-_8564379_8564379	1.58167	Nkx2-4	ENSRNOT00000060975|LOC680885|ENSRNOG00000039749|hypothetical protein LOC680885 [Source:RGD Symbol%3BAcc:1586999]
rn6_v1_chr1_-_242765807_242765807	1.42332	Nkx2-4	ENSRNOT00000020763|Pgm5|ENSRNOG00000015406|phosphoglucomutase 5 [Source:RGD Symbol%3BAcc:1307969]
rn6_v1_chr10_-_19574094_19574094	1.39551	Nkx2-4	ENSRNOT00000059810|Dock2|ENSRNOG00000006932|dedicator of cytokinesis 2 [Source:RGD Symbol%3BAcc:1564189]
rn6_v1_chr5_-_139853247_139853247	1.35148	Nkx2-4	ENSRNOT00000056644|Exo5|ENSRNOG00000037432|exonuclease 5 [Source:RGD Symbol%3BAcc:1309802]
rn6_v1_chr1_-_82004538_82004538	1.30944	Nkx2-4	ENSRNOT00000087572|Pou2f2|ENSRNOG00000055650|POU class 2 homeobox 2 [Source:RGD Symbol%3BAcc:621690]
rn6_v1_chr14_-_74095146_74095146	1.30301	Nkx2-4	ENSRNOT00000049313|LOC679766|ENSRNOG00000033640|similar to developmental pluripotency-associated 3 [Source:RGD Symbol%3BAcc:1584776]
rn6_v1_chr4_+_120672152_120672152	1.28347	Nkx2-4	ENSRNOT00000077231|Mgll|ENSRNOG00000014508|monoglyceride lipase [Source:RGD Symbol%3BAcc:71039]
rn6_v1_chr12_-_13133219_13133219	1.26041	Nkx2-4	ENSRNOT00000092292|Daglb|ENSRNOG00000001079|diacylglycerol lipase%2C beta [Source:RGD Symbol%3BAcc:1310193]
rn6_v1_chr7_-_9104719_9104719	1.15838	Nkx2-4	ENSRNOT00000088247|LOC103692758|ENSRNOG00000054122|olfactory receptor 6C74-like [Source:RGD Symbol%3BAcc:9134166]
rn6_v1_chr4_+_82783686_82783686	1.15292	Nkx2-4	ENSRNOT00000041988|Tax1bp1|ENSRNOG00000008393|Tax1 binding protein 1 [Source:RGD Symbol%3BAcc:708579]
rn6_v1_chr20_-_5227620_5227620	1.13805	Nkx2-4	ENSRNOT00000086240|RT1-DMb|ENSRNOG00000051002|RT1 class II%2C locus DMb [Source:RGD Symbol%3BAcc:735096]
rn6_v1_chr4_-_68819872_68819928	1.02951	Nkx2-4	ENSRNOT00000033265|Clec5a|ENSRNOG00000026306|C-type lectin domain family 5%2C member A [Source:RGD Symbol%3BAcc:1584755]	ENSRNOT00000081884|Clec5a|ENSRNOG00000026306|C-type lectin domain family 5%2C member A [Source:RGD Symbol%3BAcc:1584755]
rn6_v1_chr12_-_19114399_19114399	0.961664	Nkx2-4	ENSRNOT00000073099|Cyp3a9|ENSRNOG00000046643|cytochrome P450%2C family 3%2C subfamily a%2C polypeptide 9 [Source:RGD Symbol%3BAcc:708392]
rn6_v1_chr3_-_173944396_173944396	0.952155	Nkx2-4	ENSRNOT00000079019|Sycp2|ENSRNOG00000061690|synaptonemal complex protein 2 [Source:RGD Symbol%3BAcc:69429]
rn6_v1_chr14_-_107160334_107160334	0.860127	Nkx2-4	ENSRNOT00000012131|Ehbp1|ENSRNOG00000008917|EH domain binding protein 1 [Source:RGD Symbol%3BAcc:1310604]
rn6_v1_chr10_-_70646495_70646495	0.804023	Nkx2-4	ENSRNOT00000071218|Gas2l2|ENSRNOG00000047546|growth arrest-specific 2 like 2 [Source:RGD Symbol%3BAcc:1307868]
rn6_v1_chr1_-_155955173_155955173	0.785834	Nkx2-4	ENSRNOT00000079345|AABR07004776.1|ENSRNOG00000051568|
rn6_v1_chr9_-_17163170_17163170	0.726701	Nkx2-4	ENSRNOT00000025921|Xpo5|ENSRNOG00000019085|exportin 5 [Source:RGD Symbol%3BAcc:1311522]
rn6_v1_chr6_+_10306405_10306508	0.669166	Nkx2-4	ENSRNOT00000090420|Epas1|ENSRNOG00000021318|endothelial PAS domain protein 1 [Source:RGD Symbol%3BAcc:68404]	ENSRNOT00000080507|Epas1|ENSRNOG00000021318|endothelial PAS domain protein 1 [Source:RGD Symbol%3BAcc:68404]
rn6_v1_chr8_+_1502877_1502877	0.667374	Nkx2-4	ENSRNOT00000034482|Msantd4|ENSRNOG00000022245|Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:RGD Symbol%3BAcc:1565380]
rn6_v1_chr10_+_90984227_90984266	0.65093	Nkx2-4	ENSRNOT00000003890|Ccdc103|ENSRNOG00000002905|coiled-coil domain containing 103 [Source:RGD Symbol%3BAcc:1562370]	ENSRNOT00000093707|Ccdc103|ENSRNOG00000002905|coiled-coil domain containing 103 [Source:RGD Symbol%3BAcc:1562370]
rn6_v1_chr8_+_96551245_96551245	0.625638	Nkx2-4	ENSRNOT00000039850|Bcl2a1|ENSRNOG00000047606|BCL2-related protein A1 [Source:RGD Symbol%3BAcc:620621]
rn6_v1_chr2_-_240866689_240866689	0.579295	Nkx2-4	ENSRNOT00000036838|Nfkb1|ENSRNOG00000023258|nuclear factor kappa B subunit 1 [Source:RGD Symbol%3BAcc:70498]
rn6_v1_chr7_+_107467260_107467286	0.500584	Nkx2-4	ENSRNOT00000009240|Tg|ENSRNOG00000006104|thyroglobulin [Source:RGD Symbol%3BAcc:3848]	ENSRNOT00000077382|Tg|ENSRNOG00000006104|thyroglobulin [Source:RGD Symbol%3BAcc:3848]
rn6_v1_chr2_-_213178632_213178632	0.444787	Nkx2-4	ENSRNOT00000023079|LOC108348173|ENSRNOG00000017187|protein arginine N-methyltransferase 6 [Source:RGD Symbol%3BAcc:11469917]
rn6_v1_chr1_+_60248695_60248695	0.306417	Nkx2-4	ENSRNOT00000079558|Vom1r9|ENSRNOG00000054409|vomeronasal 1 receptor 9 [Source:RGD Symbol%3BAcc:2316475]
rn6_v1_chr8_-_20173107_20173107	0.300522	Nkx2-4	ENSRNOT00000045215|Olr1163|ENSRNOG00000030569|olfactory receptor 1163 [Source:RGD Symbol%3BAcc:1334266]
rn6_v1_chr13_-_26769374_26769374	0.269357	Nkx2-4	ENSRNOT00000003768|Bcl2|ENSRNOG00000002791|BCL2%2C apoptosis regulator [Source:RGD Symbol%3BAcc:2199]
rn6_v1_chr1_+_170147300_170147300	0.26009	Nkx2-4	ENSRNOT00000048075|Olr200|ENSRNOG00000048852|olfactory receptor 200 [Source:RGD Symbol%3BAcc:1334048]
rn6_v1_chr3_-_74567685_74567685	0.254633	Nkx2-4	ENSRNOT00000068048|Olr532|ENSRNOG00000055669|olfactory receptor 532 [Source:RGD Symbol%3BAcc:1333655]
rn6_v1_chr1_+_75233703_75233703	0.236171	Nkx2-4	ENSRNOT00000064178|LOC100911727|ENSRNOG00000047206|DNA ligase 1-like [Source:RGD Symbol%3BAcc:6491367]
rn6_v1_chr7_-_130170609_130170609	0.197542	Nkx2-4	ENSRNOT00000088030|Dennd6b|ENSRNOG00000029866|DENN domain containing 6B [Source:RGD Symbol%3BAcc:1308012]
rn6_v1_chr20_+_1736377_1736377	0.166989	Nkx2-4	ENSRNOT00000047035|Olr1734|ENSRNOG00000058776|olfactory receptor 1734 [Source:RGD Symbol%3BAcc:1334232]
rn6_v1_chr3_+_18805220_18805220	0.16622	Nkx2-4	ENSRNOT00000071216|Igkv4-86|ENSRNOG00000047655|immunoglobulin kappa variable 4-86 [Source:MGI Symbol%3BAcc:MGI:2685305]
rn6_v1_chr6_+_136084605_136084605	0.14199	Nkx2-4	ENSRNOT00000092806|Mark3|ENSRNOG00000010330|microtubule affinity regulating kinase 3 [Source:RGD Symbol%3BAcc:619883]
rn6_v1_chr5_+_118418799_118418799	0.124325	Nkx2-4	ENSRNOT00000012052|Alg6|ENSRNOG00000009045|ALG6%2C alpha-1%2C3-glucosyltransferase [Source:RGD Symbol%3BAcc:1308815]
rn6_v1_chr1_-_44615760_44615760	0.0939489	Nkx2-4	ENSRNOT00000022148|Nox3|ENSRNOG00000016490|NADPH oxidase 3 [Source:RGD Symbol%3BAcc:1303190]
rn6_v1_chr7_+_140742418_140742418	0.0569409	Nkx2-4	ENSRNOT00000089211|Prph|ENSRNOG00000052880|peripherin [Source:RGD Symbol%3BAcc:3414]
rn6_v1_chr1_-_48686713_48686713	0.0266809	Nkx2-4	ENSRNOT00000091196|AABR07001516.1|ENSRNOG00000055981|
