rn6_v1_chr8_-_120446455_120446507	21.0977	Nkx3-1	ENSRNOT00000085161|Arpp21|ENSRNOG00000008919|cAMP regulated phosphoprotein 21 [Source:RGD Symbol%3BAcc:1593239]	ENSRNOT00000042854|Arpp21|ENSRNOG00000008919|cAMP regulated phosphoprotein 21 [Source:RGD Symbol%3BAcc:1593239]	ENSRNOT00000037199|Arpp21|ENSRNOG00000008919|cAMP regulated phosphoprotein 21 [Source:RGD Symbol%3BAcc:1593239]
rn6_v1_chr11_+_54619129_54619129	13.1967	Nkx3-1	ENSRNOT00000059924|Trat1|ENSRNOG00000029564|T cell receptor associated transmembrane adaptor 1 [Source:RGD Symbol%3BAcc:1563011]
rn6_v1_chr15_+_31642169_31642169	13.1532	Nkx3-1	ENSRNOT00000072362|AABR07017833.1|ENSRNOG00000054992|
rn6_v1_chr4_+_70572942_70572942	13.1066	Nkx3-1	ENSRNOT00000051964|AC142181.1|ENSRNOG00000033815|
rn6_v1_chr15_+_31417147_31417147	12.3074	Nkx3-1	ENSRNOT00000092182|AABR07017824.2|ENSRNOG00000051728|
rn6_v1_chr15_-_29761117_29761117	12.166	Nkx3-1	ENSRNOT00000075194|AABR07017658.2|ENSRNOG00000050394|
rn6_v1_chr19_-_10681145_10681145	11.6809	Nkx3-1	ENSRNOT00000022167|Ccl22|ENSRNOG00000016535|C-C motif chemokine ligand 22 [Source:RGD Symbol%3BAcc:619933]
rn6_v1_chr15_+_31097291_31097291	11.6517	Nkx3-1	ENSRNOT00000075456|AABR07017789.1|ENSRNOG00000049030|
rn6_v1_chr1_-_104202591_104202591	11.3103	Nkx3-1	ENSRNOT00000035512|E2f8|ENSRNOG00000022537|E2F transcription factor 8 [Source:RGD Symbol%3BAcc:1308091]
rn6_v1_chr15_+_30570483_30570483	11.2207	Nkx3-1	ENSRNOT00000071740|AABR07017745.1|ENSRNOG00000048707|
rn6_v1_chr10_-_31419235_31419235	9.89064	Nkx3-1	ENSRNOT00000059496|Cyfip2|ENSRNOG00000006557|cytoplasmic FMR1 interacting protein 2 [Source:RGD Symbol%3BAcc:1305048]
rn6_v1_chr15_+_31010891_31010891	9.50177	Nkx3-1	ENSRNOT00000088134|AABR07017781.1|ENSRNOG00000053359|
rn6_v1_chr2_-_203413124_203413125	9.48034	Nkx3-1	ENSRNOT00000077898|Cd101|ENSRNOG00000037190|CD101 molecule [Source:RGD Symbol%3BAcc:1311453]	ENSRNOT00000056140|Cd101|ENSRNOG00000037190|CD101 molecule [Source:RGD Symbol%3BAcc:1311453]
rn6_v1_chr2_-_132551235_132551235	9.41363	Nkx3-1	ENSRNOT00000058250|LOC100365525|ENSRNOG00000031248|rCG65904-like [Source:RGD Symbol%3BAcc:2318857]
rn6_v1_chr9_+_60900213_60900213	8.95324	Nkx3-1	ENSRNOT00000017859|Ccdc150|ENSRNOG00000013318|coiled-coil domain containing 150 [Source:RGD Symbol%3BAcc:1304775]
rn6_v1_chr2_+_127625683_127625683	8.77396	Nkx3-1	ENSRNOT00000015474|Hspa4l|ENSRNOG00000010819|heat shock protein 4-like [Source:RGD Symbol%3BAcc:1306528]
rn6_v1_chr15_-_30019055_30019055	8.64636	Nkx3-1	ENSRNOT00000073984|AABR07017681.1|ENSRNOG00000049482|
rn6_v1_chr4_-_128266082_128266082	8.28986	Nkx3-1	ENSRNOT00000039549|Nup50|ENSRNOG00000024560|nucleoporin 50 [Source:RGD Symbol%3BAcc:3191]
rn6_v1_chrX_+_70461718_70461776	8.25761	Nkx3-1	ENSRNOT00000078233|Kif4a|ENSRNOG00000038035|kinesin family member 4A [Source:RGD Symbol%3BAcc:620526]	ENSRNOT00000003789|Kif4a|ENSRNOG00000038035|kinesin family member 4A [Source:RGD Symbol%3BAcc:620526]
rn6_v1_chr15_-_29246222_29246222	7.85022	Nkx3-1	ENSRNOT00000081806|AABR07017617.1|ENSRNOG00000053459|
rn6_v1_chr8_-_13906355_13906355	7.69908	Nkx3-1	ENSRNOT00000029634|Cep295|ENSRNOG00000010999|centrosomal protein 295 [Source:RGD Symbol%3BAcc:1311723]
rn6_v1_chr13_-_95348913_95348913	7.69505	Nkx3-1	ENSRNOT00000057879|Akt3|ENSRNOG00000021497|AKT serine/threonine kinase 3 [Source:RGD Symbol%3BAcc:62390]
rn6_v1_chr15_-_30323833_30323833	7.66479	Nkx3-1	ENSRNOT00000071631|AABR07017714.1|ENSRNOG00000046417|
rn6_v1_chr1_+_253221812_253221813	7.12698	Nkx3-1	ENSRNOT00000085880|Kif20b|ENSRNOG00000018929|kinesin family member 20B [Source:RGD Symbol%3BAcc:1308497]	ENSRNOT00000054753|Kif20b|ENSRNOG00000018929|kinesin family member 20B [Source:RGD Symbol%3BAcc:1308497]
rn6_v1_chr15_-_45524582_45524582	6.9836	Nkx3-1	ENSRNOT00000081912|Gucy1b2|ENSRNOG00000009440|guanylate cyclase 1 soluble subunit beta 2 [Source:RGD Symbol%3BAcc:2770]
rn6_v1_chr4_-_69163881_69163881	6.86063	Nkx3-1	ENSRNOT00000048779|Tryx5|ENSRNOG00000028989|trypsin X5 [Source:RGD Symbol%3BAcc:1302947]
rn6_v1_chr4_+_52199416_52199416	6.84567	Nkx3-1	ENSRNOT00000009537|Spam1|ENSRNOG00000007231|sperm adhesion molecule 1 [Source:RGD Symbol%3BAcc:620547]
rn6_v1_chr1_-_205630073_205630073	6.61937	Nkx3-1	ENSRNOT00000037064|Tex36|ENSRNOG00000026848|testis expressed 36 [Source:RGD Symbol%3BAcc:1566410]
rn6_v1_chr3_+_80468154_80468154	6.21622	Nkx3-1	ENSRNOT00000021837|Ckap5|ENSRNOG00000016067|cytoskeleton associated protein 5 [Source:RGD Symbol%3BAcc:1563596]
rn6_v1_chr3_+_148790979_148790979	6.15948	Nkx3-1	ENSRNOT00000085757|Kif3b|ENSRNOG00000010361|kinesin family member 3B [Source:RGD Symbol%3BAcc:1306815]
rn6_v1_chr1_-_205669760_205669760	6.09304	Nkx3-1	ENSRNOT00000086703|Tex36|ENSRNOG00000026848|testis expressed 36 [Source:RGD Symbol%3BAcc:1566410]
rn6_v1_chr15_-_88670349_88670349	5.89538	Nkx3-1	ENSRNOT00000012881|Rnf219|ENSRNOG00000009690|ring finger protein 219 [Source:RGD Symbol%3BAcc:1564706]
rn6_v1_chr2_-_165591110_165591110	5.84736	Nkx3-1	ENSRNOT00000091140|Ift80|ENSRNOG00000009808|intraflagellar transport 80 [Source:RGD Symbol%3BAcc:1312006]
rn6_v1_chr3_+_15379109_15379109	5.829	Nkx3-1	ENSRNOT00000036495|Morn5|ENSRNOG00000026111|MORN repeat containing 5 [Source:RGD Symbol%3BAcc:1307739]
rn6_v1_chr6_-_25507073_25507073	5.81089	Nkx3-1	ENSRNOT00000061176|Plb1|ENSRNOG00000026037|phospholipase B1 [Source:RGD Symbol%3BAcc:621565]
rn6_v1_chr14_-_3446611_3446611	5.73291	Nkx3-1	ENSRNOT00000080901|Brdt|ENSRNOG00000002073|bromodomain testis associated [Source:RGD Symbol%3BAcc:1306678]
rn6_v1_chr1_+_81579736_81579736	5.66894	Nkx3-1	ENSRNOT00000071339|LOC100910611|ENSRNOG00000045922|CD177 antigen-like [Source:RGD Symbol%3BAcc:6497684]
rn6_v1_chr12_+_37878653_37878653	5.64531	Nkx3-1	ENSRNOT00000091084|Pitpnm2|ENSRNOG00000029260|phosphatidylinositol transfer protein%2C membrane-associated 2 [Source:RGD Symbol%3BAcc:1310867]
rn6_v1_chr3_+_150055749_150055749	5.52657	Nkx3-1	ENSRNOT00000055335|Actl10|ENSRNOG00000036864|actin-like 10 [Source:RGD Symbol%3BAcc:6491130]
rn6_v1_chr1_+_156552328_156552328	5.49589	Nkx3-1	ENSRNOT00000055401|Dlg2|ENSRNOG00000022635|discs large MAGUK scaffold protein 2 [Source:RGD Symbol%3BAcc:619895]
rn6_v1_chr5_+_16845631_16845631	5.39732	Nkx3-1	ENSRNOT00000047889|Chchd7|ENSRNOG00000031769|coiled-coil-helix-coiled-coil-helix domain containing 7 [Source:RGD Symbol%3BAcc:1592689]
rn6_v1_chr4_-_176596591_176596591	5.35568	Nkx3-1	ENSRNOT00000086365|Recql|ENSRNOG00000012602|RecQ like helicase [Source:RGD Symbol%3BAcc:1311071]
rn6_v1_chr15_+_32012543_32012543	5.34342	Nkx3-1	ENSRNOT00000078174|AABR07017868.5|ENSRNOG00000057857|
rn6_v1_chr14_+_81858737_81858743	5.32774	Nkx3-1	ENSRNOT00000029784|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]	ENSRNOT00000058068|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]	ENSRNOT00000058067|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]
rn6_v1_chrX_-_40086870_40086870	5.27029	Nkx3-1	ENSRNOT00000010027|Smpx|ENSRNOG00000007495|small muscle protein%2C X-linked [Source:RGD Symbol%3BAcc:69233]
rn6_v1_chr7_+_40217991_40217991	5.25541	Nkx3-1	ENSRNOT00000085684|Cep290|ENSRNOG00000056458|centrosomal protein 290 [Source:RGD Symbol%3BAcc:1311640]
rn6_v1_chr19_-_37819789_37819789	5.22242	Nkx3-1	ENSRNOT00000036702|Cenpt|ENSRNOG00000024178|centromere protein T [Source:RGD Symbol%3BAcc:1309383]
rn6_v1_chrX_+_29504349_29504349	5.08456	Nkx3-1	ENSRNOT00000005981|Tceanc|ENSRNOG00000004531|transcription elongation factor A N-terminal and central domain containing [Source:RGD Symbol%3BAcc:1584894]
rn6_v1_chr1_+_106405002_106405002	5.08296	Nkx3-1	ENSRNOT00000074027|LOC103690168|ENSRNOG00000045720|probable isocitrate dehydrogenase [NAD] gamma 2%2C mitochondrial [Source:RGD Symbol%3BAcc:9248730]
rn6_v1_chr19_+_56220755_56220755	5.059	Nkx3-1	ENSRNOT00000023452|Tubb3|ENSRNOG00000017209|tubulin%2C beta 3 class III [Source:RGD Symbol%3BAcc:628595]
rn6_v1_chr1_+_82816984_82816984	5.05001	Nkx3-1	ENSRNOT00000074588|LOC100910611|ENSRNOG00000046375|CD177 antigen-like [Source:RGD Symbol%3BAcc:6497684]
rn6_v1_chr4_-_6046477_6046477	5.00336	Nkx3-1	ENSRNOT00000073925|Cct8l1|ENSRNOG00000050369|chaperonin containing TCP1%2C subunit 8 (theta)-like 1 [Source:RGD Symbol%3BAcc:1561536]
rn6_v1_chr18_-_74478341_74478341	4.99216	Nkx3-1	ENSRNOT00000074572|Slc14a1|ENSRNOG00000016753|solute carrier family 14 member 1 [Source:RGD Symbol%3BAcc:3688]
rn6_v1_chr15_-_33285779_33285779	4.9901	Nkx3-1	ENSRNOT00000036150|Cdh24|ENSRNOG00000013503|cadherin 24 [Source:RGD Symbol%3BAcc:1560161]
rn6_v1_chr19_+_38162515_38162515	4.98441	Nkx3-1	ENSRNOT00000027117|Slc7a6|ENSRNOG00000019943|solute carrier family 7 member 6 [Source:RGD Symbol%3BAcc:1309193]
rn6_v1_chr10_-_17721233_17721233	4.95289	Nkx3-1	ENSRNOT00000031337|Smim23|ENSRNOG00000027196|small integral membrane protein 23 [Source:RGD Symbol%3BAcc:1306625]
rn6_v1_chr1_+_82934134_82934134	4.93763	Nkx3-1	ENSRNOT00000072914|LOC100910611|ENSRNOG00000049059|CD177 antigen-like [Source:RGD Symbol%3BAcc:6497684]
rn6_v1_chr15_+_47455690_47455690	4.89532	Nkx3-1	ENSRNOT00000075276|LOC100910401|ENSRNOG00000047637|serine protease 55-like [Source:RGD Symbol%3BAcc:6498506]
rn6_v1_chr11_+_42936028_42936028	4.86379	Nkx3-1	ENSRNOT00000074653|AABR07033887.1|ENSRNOG00000045728|
rn6_v1_chr4_+_22898527_22898527	4.78582	Nkx3-1	ENSRNOT00000072455|Dbf4|ENSRNOG00000050482|DBF4 zinc finger [Source:RGD Symbol%3BAcc:1305854]	ENSRNOT00000076123|Dbf4|ENSRNOG00000050482|DBF4 zinc finger [Source:RGD Symbol%3BAcc:1305854]
rn6_v1_chr1_+_252497452_252497452	4.74087	Nkx3-1	ENSRNOT00000075598|Stambpl1|ENSRNOG00000050224|STAM binding protein-like 1 [Source:RGD Symbol%3BAcc:1583011]
rn6_v1_chr1_-_189199376_189199376	4.72208	Nkx3-1	ENSRNOT00000021027|Umod|ENSRNOG00000015557|uromodulin [Source:RGD Symbol%3BAcc:3940]
rn6_v1_chr10_+_109950988_109950988	4.6822	Nkx3-1	ENSRNOT00000071293|LOC688321|ENSRNOG00000045751|similar to Lung carbonyl reductase [NADPH] (NADPH-dependent carbonyl reductase) (LCR) (Adipocyte P27 protein) (AP27) [Source:RGD Symbol%3BAcc:1590050]
rn6_v1_chr15_-_55209342_55209342	4.57267	Nkx3-1	ENSRNOT00000021752|Rb1|ENSRNOG00000016029|RB transcriptional corepressor 1 [Source:RGD Symbol%3BAcc:3540]
rn6_v1_chr4_+_160020472_160020472	4.51936	Nkx3-1	ENSRNOT00000078802|Parp11|ENSRNOG00000060689|poly (ADP-ribose) polymerase family%2C member 11 [Source:RGD Symbol%3BAcc:1561791]
rn6_v1_chr7_+_27620458_27620458	4.4736	Nkx3-1	ENSRNOT00000059532|RGD1560034|ENSRNOG00000038943|similar to FLJ25323 protein [Source:RGD Symbol%3BAcc:1560034]
rn6_v1_chr10_+_72147816_72147816	4.47097	Nkx3-1	ENSRNOT00000090085|LOC102553386|ENSRNOG00000053557|SUMO-conjugating enzyme UBC9-like [Source:RGD Symbol%3BAcc:7518044]
rn6_v1_chr14_+_3204390_3204390	4.45989	Nkx3-1	ENSRNOT00000088078|Glmn|ENSRNOG00000002054|glomulin%2C FKBP associated protein [Source:RGD Symbol%3BAcc:1588600]
rn6_v1_chr2_+_202200797_202200797	4.41327	Nkx3-1	ENSRNOT00000042263|Spag17|ENSRNOG00000037196|sperm associated antigen 17 [Source:RGD Symbol%3BAcc:1592218]	ENSRNOT00000071938|Spag17|ENSRNOG00000037196|sperm associated antigen 17 [Source:RGD Symbol%3BAcc:1592218]
rn6_v1_chr4_-_6062641_6062641	4.3758	Nkx3-1	ENSRNOT00000074846|Cct8l1|ENSRNOG00000047114|chaperonin containing TCP1%2C subunit 8 (theta)-like 1 [Source:RGD Symbol%3BAcc:1561536]
rn6_v1_chr16_+_34795971_34795971	4.26835	Nkx3-1	ENSRNOT00000043510|LOC100912321|ENSRNOG00000032890|myeloid-associated differentiation marker-like [Source:RGD Symbol%3BAcc:6487726]
rn6_v1_chr8_-_78397123_78397210	4.21355	Nkx3-1	ENSRNOT00000087270|Tcf12|ENSRNOG00000057754|transcription factor 12 [Source:RGD Symbol%3BAcc:3829]	ENSRNOT00000084925|Tcf12|ENSRNOG00000057754|transcription factor 12 [Source:RGD Symbol%3BAcc:3829]
rn6_v1_chr11_+_53081025_53081025	4.2072	Nkx3-1	ENSRNOT00000002700|Bbx|ENSRNOG00000001971|BBX%2C HMG-box containing [Source:RGD Symbol%3BAcc:1309769]
rn6_v1_chr3_-_112371664_112371664	4.18736	Nkx3-1	ENSRNOT00000079606|LOC100910478|ENSRNOG00000048310|leucine-rich repeat-containing protein 57-like [Source:RGD Symbol%3BAcc:6498299]	ENSRNOT00000012636|LOC100910478|ENSRNOG00000048310|leucine-rich repeat-containing protein 57-like [Source:RGD Symbol%3BAcc:6498299]
rn6_v1_chr6_-_27460038_27460038	4.14188	Nkx3-1	ENSRNOT00000036815|Drc1|ENSRNOG00000024905|dynein regulatory complex subunit 1 [Source:RGD Symbol%3BAcc:1359318]
rn6_v1_chr9_-_27761365_27761365	4.1409	Nkx3-1	ENSRNOT00000018552|Kcnq5|ENSRNOG00000013781|potassium voltage-gated channel subfamily Q member 5 [Source:RGD Symbol%3BAcc:628848]
rn6_v1_chr1_+_101410019_101410019	4.08508	Nkx3-1	ENSRNOT00000042039|Lhb|ENSRNOG00000047040|luteinizing hormone beta polypeptide [Source:RGD Symbol%3BAcc:3006]
rn6_v1_chr1_-_277867630_277867668	3.93342	Nkx3-1	ENSRNOT00000054679|Ablim1|ENSRNOG00000046333|actin-binding LIM protein 1 [Source:RGD Symbol%3BAcc:1565768]	ENSRNOT00000091038|Ablim1|ENSRNOG00000046333|actin-binding LIM protein 1 [Source:RGD Symbol%3BAcc:1565768]	ENSRNOT00000079869|Ablim1|ENSRNOG00000046333|actin-binding LIM protein 1 [Source:RGD Symbol%3BAcc:1565768]
rn6_v1_chr7_-_58149061_58149061	3.83926	Nkx3-1	ENSRNOT00000005157|Tph2|ENSRNOG00000003880|tryptophan hydroxylase 2 [Source:RGD Symbol%3BAcc:631332]
rn6_v1_chr2_+_143895982_143895982	3.81031	Nkx3-1	ENSRNOT00000080026|Supt20h|ENSRNOG00000059480|SPT20 homolog%2C SAGA complex component [Source:RGD Symbol%3BAcc:1307812]
rn6_v1_chr2_-_54963448_54963448	3.78254	Nkx3-1	ENSRNOT00000017886|Ptger4|ENSRNOG00000013240|prostaglandin E receptor 4 [Source:RGD Symbol%3BAcc:628641]
rn6_v1_chr16_+_56247659_56247659	3.7271	Nkx3-1	ENSRNOT00000017452|Tusc3|ENSRNOG00000013061|tumor suppressor candidate 3 [Source:RGD Symbol%3BAcc:1303318]
rn6_v1_chr8_+_5606592_5606592	3.70698	Nkx3-1	ENSRNOT00000011727|Mmp12|ENSRNOG00000030187|matrix metallopeptidase 12 [Source:RGD Symbol%3BAcc:620195]
rn6_v1_chr1_-_277939039_277939089	3.70692	Nkx3-1	ENSRNOT00000079579|Ablim1|ENSRNOG00000046333|actin-binding LIM protein 1 [Source:RGD Symbol%3BAcc:1565768]	ENSRNOT00000086726|Ablim1|ENSRNOG00000046333|actin-binding LIM protein 1 [Source:RGD Symbol%3BAcc:1565768]
rn6_v1_chr13_-_109770199_109770199	3.68819	Nkx3-1	ENSRNOT00000043672|Fam71a|ENSRNOG00000029371|family with sequence similarity 71%2C member A [Source:RGD Symbol%3BAcc:1561646]
rn6_v1_chr14_+_100135271_100135271	3.67242	Nkx3-1	ENSRNOT00000032965|Fbxo48|ENSRNOG00000023026|F-box protein 48 [Source:RGD Symbol%3BAcc:1309073]
rn6_v1_chr10_+_90985653_90985653	3.63266	Nkx3-1	ENSRNOT00000093364|Ccdc103|ENSRNOG00000002905|coiled-coil domain containing 103 [Source:RGD Symbol%3BAcc:1562370]
rn6_v1_chr2_+_123791335_123791335	3.62657	Nkx3-1	ENSRNOT00000077096|Adad1|ENSRNOG00000017246|adenosine deaminase domain containing 1 [Source:RGD Symbol%3BAcc:1359309]
rn6_v1_chr20_-_27578244_27578244	3.61847	Nkx3-1	ENSRNOT00000000708|Fam26d|ENSRNOG00000000580|family with sequence similarity 26%2C member D [Source:RGD Symbol%3BAcc:1595701]
rn6_v1_chr15_+_31895223_31895223	3.59618	Nkx3-1	ENSRNOT00000092202|AABR07017855.1|ENSRNOG00000053749|
rn6_v1_chr7_+_127964752_127964752	3.59592	Nkx3-1	ENSRNOT00000038168|RGD1560617|ENSRNOG00000004457|hypothetical gene supported by NM_053561%3B AF062594 [Source:RGD Symbol%3BAcc:1560617]
rn6_v1_chr3_+_54734015_54734015	3.56315	Nkx3-1	ENSRNOT00000034341|LOC685184|ENSRNOG00000024700|similar to protein expressed in prostate%2C ovary%2C testis%2C and placenta 8 isoform 2 [Source:RGD Symbol%3BAcc:1597699]
rn6_v1_chr10_+_11879418_11879418	3.5396	Nkx3-1	ENSRNOT00000068577|RGD1561796|ENSRNOG00000007268|RGD1561796 [Source:RGD Symbol%3BAcc:1561796]
rn6_v1_chr9_-_27761733_27761733	3.50586	Nkx3-1	ENSRNOT00000040034|Kcnq5|ENSRNOG00000013781|potassium voltage-gated channel subfamily Q member 5 [Source:RGD Symbol%3BAcc:628848]
rn6_v1_chr4_+_159403501_159403501	3.47727	Nkx3-1	ENSRNOT00000086525|Akap3|ENSRNOG00000059227|A-kinase anchoring protein 3 [Source:RGD Symbol%3BAcc:1359735]
rn6_v1_chr9_-_15700235_15700312	3.42387	Nkx3-1	ENSRNOT00000088713|Trerf1|ENSRNOG00000022598|transcriptional regulating factor 1 [Source:RGD Symbol%3BAcc:1307167]	ENSRNOT00000035907|Trerf1|ENSRNOG00000022598|transcriptional regulating factor 1 [Source:RGD Symbol%3BAcc:1307167]
rn6_v1_chr3_-_161294125_161294125	3.40989	Nkx3-1	ENSRNOT00000021143|Spata25|ENSRNOG00000015744|spermatogenesis associated 25 [Source:RGD Symbol%3BAcc:1564523]
rn6_v1_chr13_+_90723092_90723092	3.40898	Nkx3-1	ENSRNOT00000010146|Kcnj10|ENSRNOG00000007705|ATP-sensitive inward rectifier potassium channel 10  [Source:RefSeq peptide%3BAcc:NP_113790]
rn6_v1_chr13_-_82295123_82295123	3.38724	Nkx3-1	ENSRNOT00000090120|LOC498265|ENSRNOG00000059276|similar to hypothetical protein FLJ10706 [Source:RGD Symbol%3BAcc:1563470]
rn6_v1_chr20_-_399933_399933	3.37074	Nkx3-1	ENSRNOT00000000953|Olr1671|ENSRNOG00000000726|olfactory receptor 1671 [Source:RGD Symbol%3BAcc:1333177]
rn6_v1_chrX_-_158261717_158261717	3.36309	Nkx3-1	ENSRNOT00000086804|RGD1561558|ENSRNOG00000053609|similar to RIKEN cDNA 1700001F22 [Source:RGD Symbol%3BAcc:1561558]
rn6_v1_chr10_-_7029136_7029136	3.35274	Nkx3-1	ENSRNOT00000091942|AC129395.1|ENSRNOG00000055413|
rn6_v1_chr17_-_57526461_57526461	3.35084	Nkx3-1	ENSRNOT00000072723|LOC103690053|ENSRNOG00000050332|ankyrin repeat domain-containing protein 26-like [Source:RGD Symbol%3BAcc:9147085]
rn6_v1_chr9_-_81772851_81772851	3.34052	Nkx3-1	ENSRNOT00000032719|Usp37|ENSRNOG00000022720|ubiquitin specific peptidase 37 [Source:RGD Symbol%3BAcc:2319715]
rn6_v1_chr1_+_101249522_101249522	3.24977	Nkx3-1	ENSRNOT00000033882|Slc6a16|ENSRNOG00000025220|solute carrier family 6%2C member 16 [Source:RGD Symbol%3BAcc:1561338]
rn6_v1_chr2_-_137331140_137331140	3.17126	Nkx3-1	ENSRNOT00000048546|LOC365791|ENSRNOG00000038242|similar to T-cell activation Rho GTPase-activating protein isoform b [Source:RGD Symbol%3BAcc:1359174]
rn6_v1_chr8_-_50603591_50603591	3.13111	Nkx3-1	ENSRNOT00000077748|LOC500990|ENSRNOG00000038867|similar to RIKEN cDNA 4931429L15 [Source:RGD Symbol%3BAcc:1561633]
rn6_v1_chr14_+_7630482_7630482	3.10038	Nkx3-1	ENSRNOT00000091581|LOC498330|ENSRNOG00000060245|similar to hypothetical protein MGC26744 [Source:RGD Symbol%3BAcc:1564576]
rn6_v1_chr1_-_82901917_82901917	3.04963	Nkx3-1	ENSRNOT00000035648|LOC102553892|ENSRNOG00000022679|CD177 antigen-like [Source:RGD Symbol%3BAcc:7698340]
rn6_v1_chr2_+_43271092_43271092	3.04072	Nkx3-1	ENSRNOT00000017571|Mier3|ENSRNOG00000013121|mesoderm induction early response 1%2C family member 3 [Source:RGD Symbol%3BAcc:1311241]
rn6_v1_chr10_-_70181708_70181708	3.00248	Nkx3-1	ENSRNOT00000076598|Rffl|ENSRNOG00000007596|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:RGD Symbol%3BAcc:727916]
rn6_v1_chr3_+_146695344_146695344	2.99478	Nkx3-1	ENSRNOT00000010955|Gins1|ENSRNOG00000008091|GINS complex subunit 1 [Source:RGD Symbol%3BAcc:1562246]
rn6_v1_chr3_-_112385528_112385528	2.98597	Nkx3-1	ENSRNOT00000049756|Lrrc57|ENSRNOG00000009143|leucine rich repeat containing 57 [Source:RGD Symbol%3BAcc:1307128]
rn6_v1_chr18_+_70996044_70996140	2.95553	Nkx3-1	ENSRNOT00000024950|Dym|ENSRNOG00000018425|dymeclin [Source:RGD Symbol%3BAcc:1309111]	ENSRNOT00000066336|Dym|ENSRNOG00000018425|dymeclin [Source:RGD Symbol%3BAcc:1309111]
rn6_v1_chr5_+_147714163_147714163	2.94666	Nkx3-1	ENSRNOT00000012663|Marcksl1|ENSRNOG00000009113|MARCKS-like 1 [Source:RGD Symbol%3BAcc:621197]
rn6_v1_chr17_+_85500113_85500113	2.90302	Nkx3-1	ENSRNOT00000091937|AABR07028768.1|ENSRNOG00000060274|
rn6_v1_chr6_+_27887797_27887797	2.88729	Nkx3-1	ENSRNOT00000015827|Asxl2|ENSRNOG00000011908|additional sex combs like 2%2C transcriptional regulator [Source:RGD Symbol%3BAcc:1304710]
rn6_v1_chr2_-_39007976_39007976	2.86096	Nkx3-1	ENSRNOT00000064292|Zswim6|ENSRNOG00000014528|zinc finger%2C SWIM-type containing 6 [Source:RGD Symbol%3BAcc:1306624]
rn6_v1_chr19_-_14945302_14945302	2.77686	Nkx3-1	ENSRNOT00000079391|AABR07042936.2|ENSRNOG00000057497|
rn6_v1_chr5_+_135413275_135413275	2.71125	Nkx3-1	ENSRNOT00000012263|Gpbp1l1|ENSRNOG00000037595|GC-rich promoter binding protein 1-like 1 [Source:RGD Symbol%3BAcc:1359562]
rn6_v1_chrX_-_124162058_124162058	2.67235	Nkx3-1	ENSRNOT00000071436|LOC367975|ENSRNOG00000047100|similar to B-cell translocation gene 1 [Source:RGD Symbol%3BAcc:1598239]
rn6_v1_chr10_+_65161152_65161152	2.65116	Nkx3-1	ENSRNOT00000011608|Cryba1|ENSRNOG00000008700|crystallin%2C beta A1 [Source:RGD Symbol%3BAcc:2415]
rn6_v1_chrX_-_38468360_38468360	2.54483	Nkx3-1	ENSRNOT00000045285|Map7d2|ENSRNOG00000005176|MAP7 domain containing 2 [Source:RGD Symbol%3BAcc:1564852]
rn6_v1_chr6_-_55698757_55698757	2.54129	Nkx3-1	ENSRNOT00000085146|Lrrc72|ENSRNOG00000025049|leucine rich repeat containing 72 [Source:RGD Symbol%3BAcc:1560395]
rn6_v1_chr1_-_20962526_20962526	2.53908	Nkx3-1	ENSRNOT00000061332|Epb41l2|ENSRNOG00000012346|erythrocyte membrane protein band 4.1-like 2 [Source:RGD Symbol%3BAcc:1563977]	ENSRNOT00000017322|Epb41l2|ENSRNOG00000012346|erythrocyte membrane protein band 4.1-like 2 [Source:RGD Symbol%3BAcc:1563977]	ENSRNOT00000017412|Epb41l2|ENSRNOG00000012346|erythrocyte membrane protein band 4.1-like 2 [Source:RGD Symbol%3BAcc:1563977]	ENSRNOT00000079688|Epb41l2|ENSRNOG00000012346|erythrocyte membrane protein band 4.1-like 2 [Source:RGD Symbol%3BAcc:1563977]	ENSRNOT00000017417|Epb41l2|ENSRNOG00000012346|erythrocyte membrane protein band 4.1-like 2 [Source:RGD Symbol%3BAcc:1563977]
rn6_v1_chr9_+_24066303_24066303	2.52804	Nkx3-1	ENSRNOT00000018163|Crisp3|ENSRNOG00000013496|cysteine-rich secretory protein 3 [Source:RGD Symbol%3BAcc:619846]
rn6_v1_chr5_-_133067245_133067245	2.51073	Nkx3-1	ENSRNOT00000033163|Skint10|ENSRNOG00000022988|selection and upkeep of intraepithelial T cells 10 [Source:RGD Symbol%3BAcc:1587504]
rn6_v1_chr1_-_7480825_7480825	2.50027	Nkx3-1	ENSRNOT00000048754|Phactr2|ENSRNOG00000015473|phosphatase and actin regulator 2 [Source:RGD Symbol%3BAcc:1303141]
rn6_v1_chr11_-_66759402_66759402	2.49427	Nkx3-1	ENSRNOT00000003326|Hcls1|ENSRNOG00000038881|hematopoietic cell specific Lyn substrate 1 [Source:RGD Symbol%3BAcc:1304754]
rn6_v1_chr8_+_117600749_117600749	2.49122	Nkx3-1	ENSRNOT00000047482|Nckipsd|ENSRNOG00000031816|NCK interacting protein with SH3 domain [Source:RGD Symbol%3BAcc:1311323]
rn6_v1_chrX_-_82699487_82699487	2.48627	Nkx3-1	ENSRNOT00000081625|Rps6ka6|ENSRNOG00000002592|ribosomal protein S6 kinase A6 [Source:RGD Symbol%3BAcc:1560817]
rn6_v1_chr13_-_105684374_105684374	2.47374	Nkx3-1	ENSRNOT00000073142|Spata17|ENSRNOG00000002504|spermatogenesis associated 17 [Source:RGD Symbol%3BAcc:1565282]
rn6_v1_chr1_-_81559685_81559685	2.42951	Nkx3-1	ENSRNOT00000075282|LOC100909620|ENSRNOG00000049821|CD177 antigen-like [Source:RGD Symbol%3BAcc:6502686]
rn6_v1_chr12_+_12859661_12859661	2.42024	Nkx3-1	ENSRNOT00000001404|Usp42|ENSRNOG00000001059|ubiquitin specific peptidase 42 [Source:RGD Symbol%3BAcc:1305231]
rn6_v1_chr13_-_15395617_15395617	2.39713	Nkx3-1	ENSRNOT00000046060|LOC304725|ENSRNOG00000029556|similar to contactin associated protein-like 5 isoform 1 [Source:RGD Symbol%3BAcc:1592077]
rn6_v1_chr6_+_102477036_102477036	2.37723	Nkx3-1	ENSRNOT00000087132|Rad51b|ENSRNOG00000059245|RAD51 paralog B [Source:MGI Symbol%3BAcc:MGI:1099436]
rn6_v1_chr1_-_99632845_99632845	2.37251	Nkx3-1	ENSRNOT00000049123|LOC103691107|ENSRNOG00000030089|NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene [Source:RGD Symbol%3BAcc:9202400]
rn6_v1_chr14_+_48726045_48726045	2.33766	Nkx3-1	ENSRNOT00000086646|Arap2|ENSRNOG00000056826|ArfGAP with RhoGAP domain%2C ankyrin repeat and PH domain 2 [Source:RGD Symbol%3BAcc:1306452]
rn6_v1_chr20_-_1818800_1818800	2.33279	Nkx3-1	ENSRNOT00000000990|RT1-M3-1|ENSRNOG00000000763|RT1 class Ib%2C locus M3%2C gene 1 [Source:RGD Symbol%3BAcc:3494]
rn6_v1_chr12_+_19303387_19303387	2.31972	Nkx3-1	ENSRNOT00000001820|Cops6|ENSRNOG00000001346|COP9 signalosome subunit 6 [Source:RGD Symbol%3BAcc:1309919]
rn6_v1_chr13_+_89524329_89524329	2.31567	Nkx3-1	ENSRNOT00000004279|Mpz|ENSRNOG00000003171|myelin protein zero [Source:RGD Symbol%3BAcc:3109]
rn6_v1_chr4_-_117531480_117531480	2.29404	Nkx3-1	ENSRNOT00000021120|Nat8f5|ENSRNOG00000015768|N-acetyltransferase 8 (GCN5-related) family member 5 [Source:RGD Symbol%3BAcc:621610]
rn6_v1_chr2_+_86914989_86914995	2.2883	Nkx3-1	ENSRNOT00000085164|LOC100360380|ENSRNOG00000051606|zinc finger protein 457-like [Source:RGD Symbol%3BAcc:2322273]	ENSRNOT00000081966|LOC100360380|ENSRNOG00000051606|zinc finger protein 457-like [Source:RGD Symbol%3BAcc:2322273]
rn6_v1_chr9_+_71230108_71230108	2.26732	Nkx3-1	ENSRNOT00000018326|Creb1|ENSRNOG00000013412|cAMP responsive element binding protein 1 [Source:RGD Symbol%3BAcc:620218]
rn6_v1_chr15_-_70399924_70399924	2.21795	Nkx3-1	ENSRNOT00000087940|Diaph3|ENSRNOG00000008986|diaphanous-related formin 3 [Source:RGD Symbol%3BAcc:1593287]
rn6_v1_chr6_+_26390689_26390764	2.20859	Nkx3-1	ENSRNOT00000079762|Ift172|ENSRNOG00000057813|intraflagellar transport 172 [Source:RGD Symbol%3BAcc:620744]	ENSRNOT00000091528|Ift172|ENSRNOG00000057813|intraflagellar transport 172 [Source:RGD Symbol%3BAcc:620744]
rn6_v1_chr7_-_116504853_116504853	2.1976	Nkx3-1	ENSRNOT00000056557|RGD1565410|ENSRNOG00000037375|similar to Ly6-C antigen gene [Source:RGD Symbol%3BAcc:1565410]
rn6_v1_chr18_-_36513317_36513317	2.18212	Nkx3-1	ENSRNOT00000025453|Plac8l1|ENSRNOG00000018820|PLAC8-like 1 [Source:RGD Symbol%3BAcc:1588513]
rn6_v1_chr17_-_10439691_10439691	2.14875	Nkx3-1	ENSRNOT00000024151|Cdhr2|ENSRNOG00000017917|cadherin-related family member 2 [Source:RGD Symbol%3BAcc:1560576]
rn6_v1_chr2_-_198942732_198942732	2.09624	Nkx3-1	ENSRNOT00000000109|Cd160|ENSRNOG00000000097|CD160 molecule [Source:RGD Symbol%3BAcc:1563598]	ENSRNOT00000073913|Cd160|ENSRNOG00000000097|CD160 molecule [Source:RGD Symbol%3BAcc:1563598]
rn6_v1_chr15_+_2526368_2526368	2.07808	Nkx3-1	ENSRNOT00000048713|Dusp13|ENSRNOG00000060401|dual specificity phosphatase 13 [Source:RGD Symbol%3BAcc:1359712]	ENSRNOT00000074803|Dusp13|ENSRNOG00000057795|dual specificity phosphatase 13 [Source:RGD Symbol%3BAcc:1359712]
rn6_v1_chr3_-_21609853_21609853	2.04397	Nkx3-1	ENSRNOT00000012160|Pdcl|ENSRNOG00000008484|phosducin-like [Source:RGD Symbol%3BAcc:621135]
rn6_v1_chr1_+_255564409_255564409	2.04227	Nkx3-1	ENSRNOT00000081786|Btaf1|ENSRNOG00000017938|B-TFIID TATA-box binding protein associated factor 1 [Source:RGD Symbol%3BAcc:1564130]
rn6_v1_chr2_-_49170025_49170025	2.03628	Nkx3-1	ENSRNOT00000060595|Parp8|ENSRNOG00000010824|poly (ADP-ribose) polymerase family%2C member 8 [Source:RGD Symbol%3BAcc:1587384]
rn6_v1_chr1_+_30863217_30863217	1.96523	Nkx3-1	ENSRNOT00000015421|Rnf146|ENSRNOG00000011588|ring finger protein 146 [Source:RGD Symbol%3BAcc:1306482]
rn6_v1_chr1_+_81372650_81372650	1.90901	Nkx3-1	ENSRNOT00000088829|Zfp428|ENSRNOG00000019802|zinc finger protein 428 [Source:RGD Symbol%3BAcc:1564862]
rn6_v1_chr7_+_74350479_74350479	1.90406	Nkx3-1	ENSRNOT00000089034|AABR07057495.1|ENSRNOG00000058166|
rn6_v1_chr3_+_101899068_101899126	1.89721	Nkx3-1	ENSRNOT00000079600|Muc15|ENSRNOG00000004703|mucin 15%2C cell surface associated [Source:RGD Symbol%3BAcc:1589864]	ENSRNOT00000006256|Muc15|ENSRNOG00000004703|mucin 15%2C cell surface associated [Source:RGD Symbol%3BAcc:1589864]
rn6_v1_chr19_-_56799445_56799445	1.89287	Nkx3-1	ENSRNOT00000024491|RGD1563991|ENSRNOG00000018027|similar to TAF5-like RNA polymerase II%2C p300/CBP-associated factor (PCAF)-associated factor [Source:RGD Symbol%3BAcc:1563991]
rn6_v1_chr8_-_39201588_39201588	1.88375	Nkx3-1	ENSRNOT00000011226|Stt3a|ENSRNOG00000031896|STT3A%2C catalytic subunit of the oligosaccharyltransferase complex [Source:RGD Symbol%3BAcc:1565793]
rn6_v1_chr7_-_139542461_139542461	1.85934	Nkx3-1	ENSRNOT00000089425|Senp1|ENSRNOG00000054297|SUMO1/sentrin specific peptidase 1 [Source:RGD Symbol%3BAcc:1310275]
rn6_v1_chr3_-_114728410_114728410	1.82163	Nkx3-1	ENSRNOT00000000181|Gatm|ENSRNOG00000000168|glycine amidinotransferase [Source:RGD Symbol%3BAcc:71090]
rn6_v1_chr4_-_129430251_129430251	1.81494	Nkx3-1	ENSRNOT00000067881|Fam19a4|ENSRNOG00000005830|family with sequence similarity 19 member A4%2C C-C motif chemokine like [Source:RGD Symbol%3BAcc:1597443]
rn6_v1_chr12_+_4546287_4546287	1.81092	Nkx3-1	ENSRNOT00000001416|Higd2al1|ENSRNOG00000001071|HIG1 hypoxia inducible domain family%2C member 2A-like 1 [Source:RGD Symbol%3BAcc:1586494]
rn6_v1_chr15_+_31051414_31051414	1.79959	Nkx3-1	ENSRNOT00000090250|AABR07017783.4|ENSRNOG00000060016|
rn6_v1_chr1_+_13595295_13595295	1.79549	Nkx3-1	ENSRNOT00000079250|Nhsl1|ENSRNOG00000060603|NHS-like 1 [Source:RGD Symbol%3BAcc:1308124]
rn6_v1_chr20_+_34895059_34895059	1.79195	Nkx3-1	ENSRNOT00000084420|Asf1a|ENSRNOG00000000415|anti-silencing function 1A histone chaperone [Source:RGD Symbol%3BAcc:1311941]
rn6_v1_chr12_-_47438931_47438931	1.77766	Nkx3-1	ENSRNOT00000050782|RGD1311899|ENSRNOG00000001185|similar to RIKEN cDNA 2210016L21 gene [Source:RGD Symbol%3BAcc:1311899]
rn6_v1_chr7_-_68549763_68549763	1.77576	Nkx3-1	ENSRNOT00000078014|Slc16a7|ENSRNOG00000007839|solute carrier family 16 member 7 [Source:RGD Symbol%3BAcc:3691]
rn6_v1_chr9_-_65957101_65957101	1.76948	Nkx3-1	ENSRNOT00000014094|Mpp4|ENSRNOG00000010486|membrane palmitoylated protein 4 [Source:RGD Symbol%3BAcc:620016]
rn6_v1_chr18_+_87415531_87415531	1.76466	Nkx3-1	ENSRNOT00000072475|AABR07032888.1|ENSRNOG00000046679|
rn6_v1_chr5_+_137546860_137546860	1.76336	Nkx3-1	ENSRNOT00000074431|Olr858|ENSRNOG00000050162|olfactory receptor 858 [Source:RGD Symbol%3BAcc:1333843]
rn6_v1_chr11_+_87224421_87224421	1.74819	Nkx3-1	ENSRNOT00000000308|Dgcr14|ENSRNOG00000000283|DiGeorge syndrome critical region gene 14 [Source:RGD Symbol%3BAcc:1308218]
rn6_v1_chr14_-_6284145_6284145	1.74175	Nkx3-1	ENSRNOT00000044065|Zfp951|ENSRNOG00000043048|zinc finger protein 951 [Source:RGD Symbol%3BAcc:2301011]
rn6_v1_chr14_-_6358720_6358720	1.74175	Nkx3-1	ENSRNOT00000048419|Zfp951|ENSRNOG00000037421|zinc finger protein 951 [Source:RGD Symbol%3BAcc:2301011]
rn6_v1_chr7_+_2645196_2645196	1.74007	Nkx3-1	ENSRNOT00000083899|Timeless|ENSRNOG00000031916|timeless circadian clock [Source:RGD Symbol%3BAcc:620939]
rn6_v1_chr1_-_165891627_165891627	1.72564	Nkx3-1	ENSRNOT00000038408|Relt|ENSRNOG00000025075|RELT tumor necrosis factor receptor [Source:RGD Symbol%3BAcc:1305381]
rn6_v1_chr13_+_71110064_71110064	1.64254	Nkx3-1	ENSRNOT00000088329|Rgs8|ENSRNOG00000002369|regulator of G-protein signaling 8 [Source:RGD Symbol%3BAcc:3571]
rn6_v1_chr5_+_8876044_8876044	1.59533	Nkx3-1	ENSRNOT00000008877|Cops5|ENSRNOG00000006499|COP9 signalosome subunit 5 [Source:RGD Symbol%3BAcc:1310301]
rn6_v1_chr10_+_34414854_34414854	1.59456	Nkx3-1	ENSRNOT00000074980|LOC684471|ENSRNOG00000048793|similar to olfactory receptor 1394 [Source:RGD Symbol%3BAcc:1590296]
rn6_v1_chrX_-_21945305_21945305	1.58328	Nkx3-1	ENSRNOT00000065084|Samt2|ENSRNOG00000046569|spermatogenesis associated multipass transmembrane protein 2 [Source:RGD Symbol%3BAcc:1589067]
rn6_v1_chr8_-_48727154_48727154	1.55979	Nkx3-1	ENSRNOT00000088471|Trappc4|ENSRNOG00000011904|trafficking protein particle complex 4 [Source:RGD Symbol%3BAcc:1302991]
rn6_v1_chr9_-_82336806_82336806	1.5032	Nkx3-1	ENSRNOT00000024667|Slc23a3|ENSRNOG00000018266|solute carrier family 23%2C member 3 [Source:RGD Symbol%3BAcc:1307402]
rn6_v1_chr18_+_15738809_15738809	1.50101	Nkx3-1	ENSRNOT00000075444|Mapre2|ENSRNOG00000049681|microtubule-associated protein%2C RP/EB family%2C member 2 [Source:RGD Symbol%3BAcc:1590736]
rn6_v1_chr8_-_48726963_48726963	1.44016	Nkx3-1	ENSRNOT00000016145|Trappc4|ENSRNOG00000011904|trafficking protein particle complex 4 [Source:RGD Symbol%3BAcc:1302991]
rn6_v1_chr9_+_100885051_100885051	1.42536	Nkx3-1	ENSRNOT00000082987|AC109427.1|ENSRNOG00000056259|
rn6_v1_chr1_-_67065797_67065797	1.42229	Nkx3-1	ENSRNOT00000048152|Vom1r46|ENSRNOG00000032817|vomeronasal 1 receptor 46 [Source:RGD Symbol%3BAcc:1359306]
rn6_v1_chr18_+_3163214_3163214	1.39394	Nkx3-1	ENSRNOT00000017291|Rbbp8|ENSRNOG00000012899|RB binding protein 8%2C endonuclease [Source:RGD Symbol%3BAcc:1308872]
rn6_v1_chr1_-_66639205_66639205	1.36105	Nkx3-1	ENSRNOT00000082190|LOC100909481|ENSRNOG00000055247|eukaryotic translation initiation factor 3 subunit E-like [Source:RGD Symbol%3BAcc:6503216]
rn6_v1_chr4_-_118487633_118487633	1.35659	Nkx3-1	ENSRNOT00000068093|Gmcl1|ENSRNOG00000017838|germ cell-less%2C spermatogenesis associated 1 [Source:RGD Symbol%3BAcc:1359265]
rn6_v1_chr12_-_30304036_30304036	1.35071	Nkx3-1	ENSRNOT00000001218|Nupr2|ENSRNOG00000000917|nuclear protein 2%2C transcriptional regulator [Source:RGD Symbol%3BAcc:1560258]
rn6_v1_chr3_-_111266542_111266542	1.33492	Nkx3-1	ENSRNOT00000031672|Ino80|ENSRNOG00000014483|INO80 complex subunit [Source:RGD Symbol%3BAcc:1310969]
rn6_v1_chr2_-_231877307_231877307	1.30972	Nkx3-1	ENSRNOT00000073860|Larp7|ENSRNOG00000048989|La ribonucleoprotein domain family%2C member 7 [Source:RGD Symbol%3BAcc:1592474]
rn6_v1_chr6_+_125876109_125876109	1.26262	Nkx3-1	ENSRNOT00000091300|Cpsf2|ENSRNOG00000005733|cleavage and polyadenylation specific factor 2 [Source:RGD Symbol%3BAcc:1309687]
rn6_v1_chr2_-_144808245_144808245	1.24455	Nkx3-1	ENSRNOT00000087849|LOC102552324|ENSRNOG00000056545|uncharacterized LOC102552324 [Source:RGD Symbol%3BAcc:7581938]
rn6_v1_chr17_-_42226377_42226377	1.21504	Nkx3-1	ENSRNOT00000024536|RGD1307443|ENSRNOG00000018141|similar to mKIAA0319 protein [Source:RGD Symbol%3BAcc:1307443]
rn6_v1_chr6_+_83083740_83083740	1.17647	Nkx3-1	ENSRNOT00000007600|Lrfn5|ENSRNOG00000005550|leucine rich repeat and fibronectin type III domain containing 5 [Source:RGD Symbol%3BAcc:1309357]
rn6_v1_chr8_+_17928358_17928358	1.16315	Nkx3-1	ENSRNOT00000029911|Mbd3l2|ENSRNOG00000026629|methyl-CpG binding domain protein 3-like 2 [Source:RGD Symbol%3BAcc:1308833]
rn6_v1_chr5_+_139783951_139783951	1.15027	Nkx3-1	ENSRNOT00000081333|Rims3|ENSRNOG00000011171|regulating synaptic membrane exocytosis 3 [Source:RGD Symbol%3BAcc:628762]
rn6_v1_chr2_+_189714754_189714754	1.14616	Nkx3-1	ENSRNOT00000086285|Gatad2b|ENSRNOG00000015553|GATA zinc finger domain containing 2B [Source:RGD Symbol%3BAcc:1308533]
rn6_v1_chr5_+_2043583_2043583	1.14219	Nkx3-1	ENSRNOT00000082813|Eloc|ENSRNOG00000031730|elongin C [Source:RGD Symbol%3BAcc:620658]
rn6_v1_chr1_-_141111400_141111400	1.13729	Nkx3-1	ENSRNOT00000022962|Rlbp1|ENSRNOG00000016897|retinaldehyde binding protein 1 [Source:RGD Symbol%3BAcc:1309649]
rn6_v1_chr9_-_121725716_121725716	1.10616	Nkx3-1	ENSRNOT00000087405|Adcyap1|ENSRNOG00000049882|adenylate cyclase activating polypeptide 1 [Source:RGD Symbol%3BAcc:2037]
rn6_v1_chr6_+_97168453_97168453	1.09962	Nkx3-1	ENSRNOT00000085790|Syt16|ENSRNOG00000056012|synaptotagmin 16 [Source:RGD Symbol%3BAcc:1564654]
rn6_v1_chr9_-_63641400_63641400	1.0747	Nkx3-1	ENSRNOT00000087684|Satb2|ENSRNOG00000010188|SATB homeobox 2 [Source:RGD Symbol%3BAcc:1562369]
rn6_v1_chr13_+_105684420_105684420	1.073	Nkx3-1	ENSRNOT00000040543|Gpatch2|ENSRNOG00000002512|G patch domain containing 2 [Source:RGD Symbol%3BAcc:1308865]
rn6_v1_chr4_+_145580799_145580799	1.05912	Nkx3-1	ENSRNOT00000013727|Vhl|ENSRNOG00000010258|von Hippel-Lindau tumor suppressor [Source:RGD Symbol%3BAcc:3960]
rn6_v1_chr3_+_43255567_43255567	1.04843	Nkx3-1	ENSRNOT00000044419|Gpd2|ENSRNOG00000033824|glycerol-3-phosphate dehydrogenase 2 [Source:RGD Symbol%3BAcc:2726]
rn6_v1_chr16_-_54137485_54137485	1.04821	Nkx3-1	ENSRNOT00000014202|Pcm1|ENSRNOG00000010155|pericentriolar material 1 [Source:RGD Symbol%3BAcc:620901]
rn6_v1_chr5_+_35865605_35865605	1.04216	Nkx3-1	ENSRNOT00000011442|Ccnc|ENSRNOG00000007719|cyclin C [Source:RGD Symbol%3BAcc:70905]
rn6_v1_chr8_-_17524839_17524839	1.02737	Nkx3-1	ENSRNOT00000081679|Naalad2|ENSRNOG00000005955|N-acetylated alpha-linked acidic dipeptidase 2 [Source:RGD Symbol%3BAcc:1305872]
rn6_v1_chr7_-_34485034_34485034	1.00082	Nkx3-1	ENSRNOT00000007351|Snrpf|ENSRNOG00000005556|small nuclear ribonucleoprotein polypeptide F [Source:RGD Symbol%3BAcc:1588229]
rn6_v1_chr16_-_54137660_54137660	1.00028	Nkx3-1	ENSRNOT00000085435|Pcm1|ENSRNOG00000010155|pericentriolar material 1 [Source:RGD Symbol%3BAcc:620901]
rn6_v1_chr9_+_90857308_90857308	0.973737	Nkx3-1	ENSRNOT00000073993|LOC100911572|ENSRNOG00000046521|collagen alpha-3(IV) chain-like [Source:RGD Symbol%3BAcc:6491864]
rn6_v1_chr13_-_26769374_26769374	0.946514	Nkx3-1	ENSRNOT00000003768|Bcl2|ENSRNOG00000002791|BCL2%2C apoptosis regulator [Source:RGD Symbol%3BAcc:2199]
rn6_v1_chr1_+_263448633_263448633	0.911212	Nkx3-1	ENSRNOT00000064510|Entpd7|ENSRNOG00000016883|ectonucleoside triphosphate diphosphohydrolase 7 [Source:RGD Symbol%3BAcc:1310638]
rn6_v1_chr17_-_81002838_81002838	0.905553	Nkx3-1	ENSRNOT00000089807|St8sia6|ENSRNOG00000051684|ST8 alpha-N-acetyl-neuraminide alpha-2%2C8-sialyltransferase 6 [Source:RGD Symbol%3BAcc:1303161]
rn6_v1_chr6_+_86872903_86872903	0.887066	Nkx3-1	ENSRNOT00000086894|Fancm|ENSRNOG00000056721|Fanconi anemia%2C complementation group M [Source:RGD Symbol%3BAcc:1307897]
rn6_v1_chr1_+_224933920_224933920	0.85274	Nkx3-1	ENSRNOT00000066823|Wdr74|ENSRNOG00000042878|WD repeat domain 74 [Source:RGD Symbol%3BAcc:1582881]
rn6_v1_chr3_-_105470475_105470475	0.846272	Nkx3-1	ENSRNOT00000011078|Gjd2|ENSRNOG00000008337|gap junction protein%2C delta 2 [Source:RGD Symbol%3BAcc:2694]
rn6_v1_chr1_-_234596971_234596971	0.78672	Nkx3-1	ENSRNOT00000017892|Trpm6|ENSRNOG00000013053|transient receptor potential cation channel%2C subfamily M%2C member 6 [Source:RGD Symbol%3BAcc:1309942]
rn6_v1_chr6_-_38453797_38453797	0.770019	Nkx3-1	ENSRNOT00000009100|Ddx1|ENSRNOG00000006652|DEAD-box helicase 1 [Source:RGD Symbol%3BAcc:619903]
rn6_v1_chr8_+_63036976_63036976	0.762677	Nkx3-1	ENSRNOT00000011383|Stoml1|ENSRNOG00000008530|stomatin like 1 [Source:RGD Symbol%3BAcc:1559463]
rn6_v1_chr19_+_26761007_26761007	0.762635	Nkx3-1	ENSRNOT00000085796|AABR07043247.1|ENSRNOG00000053972|
rn6_v1_chr1_+_230450529_230450529	0.753435	Nkx3-1	ENSRNOT00000045383|Olr371|ENSRNOG00000030471|olfactory receptor 371 [Source:RGD Symbol%3BAcc:1333922]
rn6_v1_chr15_-_60752106_60752106	0.743215	Nkx3-1	ENSRNOT00000058148|Akap11|ENSRNOG00000009987|A-kinase anchoring protein 11 [Source:RGD Symbol%3BAcc:2079]
rn6_v1_chr10_+_44228800_44228800	0.711939	Nkx3-1	ENSRNOT00000046817|Olr1431|ENSRNOG00000031194|olfactory receptor 1431 [Source:RGD Symbol%3BAcc:1334088]
rn6_v1_chrX_-_5887264_5887264	0.710026	Nkx3-1	ENSRNOT00000061058|LOC100362219|ENSRNOG00000024053|rCG64297-like [Source:RGD Symbol%3BAcc:2318566]
rn6_v1_chr3_+_149391929_149391929	0.700485	Nkx3-1	ENSRNOT00000017876|Bpifb6|ENSRNOG00000013371|BPI fold containing family B%2C member 6 [Source:RGD Symbol%3BAcc:1311602]
rn6_v1_chrX_+_156210002_156210002	0.700397	Nkx3-1	ENSRNOT00000077744|Olr1768|ENSRNOG00000058820|olfactory receptor 1768 [Source:RGD Symbol%3BAcc:1333290]
rn6_v1_chr8_+_13305152_13305152	0.698787	Nkx3-1	ENSRNOT00000012940|Mre11a|ENSRNOG00000009506|MRE11 homolog A%2C double strand break repair nuclease [Source:RGD Symbol%3BAcc:69263]
rn6_v1_chr2_+_48961645_48961645	0.679262	Nkx3-1	ENSRNOT00000049679|LOC499530|ENSRNOG00000031115|hypothetical protein LOC499530 [Source:RGD Symbol%3BAcc:1562302]
rn6_v1_chr3_-_147188929_147188929	0.678953	Nkx3-1	ENSRNOT00000055455|Rad21l1|ENSRNOG00000022335|RAD21 cohesin complex component like 1 [Source:RGD Symbol%3BAcc:1587557]
rn6_v1_chr10_+_109851854_109851854	0.65371	Nkx3-1	ENSRNOT00000087005|Aspscr1|ENSRNOG00000036678|ASPSCR1%2C UBX domain containing tether for SLC2A4 [Source:RGD Symbol%3BAcc:1588666]
rn6_v1_chrX_+_74824504_74824504	0.647292	Nkx3-1	ENSRNOT00000048963|LOC680353|ENSRNOG00000033484|similar to 60S ribosomal protein L38 [Source:RGD Symbol%3BAcc:1592976]
rn6_v1_chr1_+_173275336_173275336	0.642957	Nkx3-1	ENSRNOT00000086302|AABR07004992.1|ENSRNOG00000052236|
rn6_v1_chr18_+_35291685_35291685	0.633279	Nkx3-1	ENSRNOT00000060114|Spink9|ENSRNOG00000039251|serine peptidase inhibitor%2C Kazal type 9 [Source:RGD Symbol%3BAcc:1596746]
rn6_v1_chr3_-_1868015_1868015	0.627841	Nkx3-1	ENSRNOT00000048945|Cacna1b|ENSRNOG00000004560|calcium voltage-gated channel subunit alpha1 B [Source:RGD Symbol%3BAcc:628852]
rn6_v1_chr19_+_52347580_52347580	0.625879	Nkx3-1	ENSRNOT00000074753|Atp2c2|ENSRNOG00000049334|ATPase secretory pathway Ca2+ transporting 2 [Source:RGD Symbol%3BAcc:620647]
rn6_v1_chr6_-_142993147_142993147	0.611944	Nkx3-1	ENSRNOT00000044381|LOC100359978|ENSRNOG00000029776|mCG1038839-like [Source:RGD Symbol%3BAcc:2323067]
rn6_v1_chrX_-_19145409_19145409	0.5987	Nkx3-1	ENSRNOT00000043382|Foxr2|ENSRNOG00000030619|forkhead box R2 [Source:RGD Symbol%3BAcc:1564437]
rn6_v1_chr17_-_58301260_58301260	0.594225	Nkx3-1	ENSRNOT00000083331|Adarb2|ENSRNOG00000030775|adenosine deaminase%2C RNA-specific%2C B2 [Source:RGD Symbol%3BAcc:621519]
rn6_v1_chr8_-_40122450_40122450	0.591423	Nkx3-1	ENSRNOT00000039729|Tbrg1|ENSRNOG00000023850|transforming growth factor beta regulator 1 [Source:RGD Symbol%3BAcc:1305123]
rn6_v1_chr17_-_80860195_80860195	0.577717	Nkx3-1	ENSRNOT00000038651|Trdmt1|ENSRNOG00000026132|tRNA aspartic acid methyltransferase 1 [Source:RGD Symbol%3BAcc:1306292]
rn6_v1_chr1_+_84758233_84758233	0.572775	Nkx3-1	ENSRNOT00000072734|AABR07002775.1|ENSRNOG00000048489|
rn6_v1_chr3_+_171832500_171832500	0.566263	Nkx3-1	ENSRNOT00000007554|Vapb|ENSRNOG00000005331|VAMP associated protein B and C [Source:RGD Symbol%3BAcc:68326]
rn6_v1_chr1_+_169590308_169590308	0.562922	Nkx3-1	ENSRNOT00000023147|Olr155|ENSRNOG00000017234|olfactory receptor 155 [Source:RGD Symbol%3BAcc:1332954]
rn6_v1_chr16_-_9658484_9658484	0.546939	Nkx3-1	ENSRNOT00000065216|Mapk8|ENSRNOG00000020155|mitogen-activated protein kinase 8 [Source:RGD Symbol%3BAcc:621506]
rn6_v1_chr13_-_47623849_47623849	0.543871	Nkx3-1	ENSRNOT00000006106|Il24|ENSRNOG00000004470|interleukin 24 [Source:RGD Symbol%3BAcc:621484]
rn6_v1_chr6_-_92398525_92398525	0.521912	Nkx3-1	ENSRNOT00000007314|Sav1|ENSRNOG00000005264|salvador family WW domain containing protein 1 [Source:RGD Symbol%3BAcc:1307253]
rn6_v1_chr14_-_21553949_21553949	0.517785	Nkx3-1	ENSRNOT00000031642|Smr3b|ENSRNOG00000001942|submaxillary gland androgen regulated protein 3B [Source:RGD Symbol%3BAcc:3953]
rn6_v1_chr17_+_45467015_45467015	0.516931	Nkx3-1	ENSRNOT00000081408|Gpx5|ENSRNOG00000057180|glutathione peroxidase 5 [Source:RGD Symbol%3BAcc:69227]
rn6_v1_chr5_+_173237642_173237642	0.502926	Nkx3-1	ENSRNOT00000068770|Ankrd65|ENSRNOG00000043331|ankyrin repeat domain 65 [Source:RGD Symbol%3BAcc:1588232]
rn6_v1_chr2_+_27713880_27713880	0.502876	Nkx3-1	ENSRNOT00000083143|Gcnt4|ENSRNOG00000055451|glucosaminyl (N-acetyl) transferase 4%2C core 2 (beta-1%2C6-N-acetylglucosaminyltransferase) [Source:MGI Symbol%3BAcc:MGI:2684919]
rn6_v1_chr1_+_101554642_101554642	0.497608	Nkx3-1	ENSRNOT00000028474|Bcat2|ENSRNOG00000020956|branched chain amino acid transaminase 2 [Source:RGD Symbol%3BAcc:68948]
rn6_v1_chr6_+_110410141_110410141	0.494065	Nkx3-1	ENSRNOT00000013867|Esrrb|ENSRNOG00000010259|estrogen-related receptor beta [Source:RGD Symbol%3BAcc:1359557]
rn6_v1_chr4_+_168775111_168775111	0.49294	Nkx3-1	ENSRNOT00000011096|Ddx47|ENSRNOG00000007838|DEAD-box helicase 47 [Source:RGD Symbol%3BAcc:1310437]
rn6_v1_chr17_-_90071408_90071408	0.483907	Nkx3-1	ENSRNOT00000071978|Pdss1|ENSRNOG00000048849|decaprenyl diphosphate synthase subunit 1 [Source:RGD Symbol%3BAcc:2319976]
rn6_v1_chr3_+_172155496_172155496	0.468853	Nkx3-1	ENSRNOT00000066279|Stx16|ENSRNOG00000005281|syntaxin 16 [Source:RGD Symbol%3BAcc:1309423]
rn6_v1_chr11_+_20474483_20474483	0.440789	Nkx3-1	ENSRNOT00000082417|Ncam2|ENSRNOG00000002126|neural cell adhesion molecule 2 [Source:RGD Symbol%3BAcc:1303131]	ENSRNOT00000002895|Ncam2|ENSRNOG00000002126|neural cell adhesion molecule 2 [Source:RGD Symbol%3BAcc:1303131]
rn6_v1_chr2_-_60461458_60461458	0.440271	Nkx3-1	ENSRNOT00000024285|Brix1|ENSRNOG00000018021|BRX1%2C biogenesis of ribosomes [Source:RGD Symbol%3BAcc:1308508]
rn6_v1_chr5_-_134776247_134776247	0.439924	Nkx3-1	ENSRNOT00000057055|Dmbx1|ENSRNOG00000010835|diencephalon/mesencephalon homeobox 1 [Source:RGD Symbol%3BAcc:1308265]
rn6_v1_chr8_+_107859366_107859366	0.430864	Nkx3-1	ENSRNOT00000039690|A4gnt|ENSRNOG00000042649|alpha-1%2C4-N-acetylglucosaminyltransferase [Source:RGD Symbol%3BAcc:1590210]
rn6_v1_chr3_-_95418679_95418679	0.405635	Nkx3-1	ENSRNOT00000018074|Rcn1|ENSRNOG00000013452|reticulocalbin 1 [Source:RGD Symbol%3BAcc:1311292]
rn6_v1_chr10_+_83081168_83081168	0.399956	Nkx3-1	ENSRNOT00000035023|Tac4|ENSRNOG00000004404|tachykinin 4 (hemokinin) [Source:RGD Symbol%3BAcc:628842]
rn6_v1_chr18_+_30904498_30904498	0.355897	Nkx3-1	ENSRNOT00000026969|Pcdhga11|ENSRNOG00000027232|protocadherin gamma subfamily A%2C 11 [Source:RGD Symbol%3BAcc:621232]
rn6_v1_chr13_+_53283855_53283855	0.355407	Nkx3-1	ENSRNOT00000043590|RGD1564839|ENSRNOG00000030278|similar to ribosomal protein L31 [Source:RGD Symbol%3BAcc:1564839]
rn6_v1_chr13_+_76962504_76962504	0.350433	Nkx3-1	ENSRNOT00000076581|Rfwd2|ENSRNOG00000042492|ring finger and WD repeat domain 2 [Source:RGD Symbol%3BAcc:1304773]
rn6_v1_chr1_-_171009670_171009670	0.350066	Nkx3-1	ENSRNOT00000026487|Olr222|ENSRNOG00000019581|olfactory receptor 222 [Source:RGD Symbol%3BAcc:1333443]
rn6_v1_chrX_+_68627313_68627329	0.347454	Nkx3-1	ENSRNOT00000076699|Yipf6|ENSRNOG00000006642|Yip1 domain family%2C member 6 [Source:RGD Symbol%3BAcc:1566154]	ENSRNOT00000076795|Yipf6|ENSRNOG00000006642|Yip1 domain family%2C member 6 [Source:RGD Symbol%3BAcc:1566154]	ENSRNOT00000008705|Yipf6|ENSRNOG00000006642|Yip1 domain family%2C member 6 [Source:RGD Symbol%3BAcc:1566154]
rn6_v1_chr1_-_44474674_44474674	0.344938	Nkx3-1	ENSRNOT00000078768|Tfb1m|ENSRNOG00000056223|transcription factor B1%2C mitochondrial [Source:RGD Symbol%3BAcc:727795]
rn6_v1_chr4_+_171250818_171250818	0.326393	Nkx3-1	ENSRNOT00000040576|Ptpro|ENSRNOG00000006231|protein tyrosine phosphatase%2C receptor type%2C O [Source:RGD Symbol%3BAcc:62068]
rn6_v1_chr12_+_2140203_2140203	0.323151	Nkx3-1	ENSRNOT00000084906|Camsap3|ENSRNOG00000000986|calmodulin regulated spectrin-associated protein family%2C member 3 [Source:RGD Symbol%3BAcc:1597412]
rn6_v1_chr8_-_132910905_132910905	0.321495	Nkx3-1	ENSRNOT00000008630|Fyco1|ENSRNOG00000006336|FYVE and coiled-coil domain containing 1 [Source:RGD Symbol%3BAcc:1309069]
rn6_v1_chrX_-_64726210_64726241	0.319632	Nkx3-1	ENSRNOT00000076012|Asb12|ENSRNOG00000004197|ankyrin repeat and SOCS box-containing 12 [Source:RGD Symbol%3BAcc:1561142]	ENSRNOT00000086265|Asb12|ENSRNOG00000004197|ankyrin repeat and SOCS box-containing 12 [Source:RGD Symbol%3BAcc:1561142]
rn6_v1_chr8_+_99568958_99568958	0.31445	Nkx3-1	ENSRNOT00000073400|Plscr5|ENSRNOG00000047917|phospholipid scramblase family%2C member 5 [Source:RGD Symbol%3BAcc:1564500]
rn6_v1_chr12_+_10577068_10577068	0.30932	Nkx3-1	ENSRNOT00000001282|Rnf6|ENSRNOG00000000968|ring finger protein 6 [Source:RGD Symbol%3BAcc:1306092]
rn6_v1_chr13_-_84793463_84793463	0.30137	Nkx3-1	ENSRNOT00000076886|Fmo9|ENSRNOG00000025119|flavin containing monooxygenase 9 [Source:RGD Symbol%3BAcc:1595083]
rn6_v1_chr8_-_18051128_18051128	0.29821	Nkx3-1	ENSRNOT00000073085|LOC100911944|ENSRNOG00000050764|olfactory receptor 7G1-like [Source:RGD Symbol%3BAcc:6489779]
rn6_v1_chr7_+_54031316_54031316	0.260957	Nkx3-1	ENSRNOT00000039096|Bbs10|ENSRNOG00000026913|Bardet-Biedl syndrome 10 [Source:RGD Symbol%3BAcc:1560748]
rn6_v1_chr3_+_112371677_112371677	0.258451	Nkx3-1	ENSRNOT00000013316|LOC100912076|ENSRNOG00000048933|HAUS augmin-like complex subunit 2-like [Source:RGD Symbol%3BAcc:6489015]
rn6_v1_chr3_+_176821652_176821652	0.257334	Nkx3-1	ENSRNOT00000055030|Rtel1|ENSRNOG00000027513|regulator of telomere elongation helicase 1 [Source:RGD Symbol%3BAcc:1306721]
rn6_v1_chr6_-_42302254_42302254	0.247623	Nkx3-1	ENSRNOT00000007071|Pqlc3|ENSRNOG00000005126|PQ loop repeat containing 3 [Source:RGD Symbol%3BAcc:1306818]
rn6_v1_chr1_+_234183427_234183427	0.237258	Nkx3-1	ENSRNOT00000050860|AABR07006451.1|ENSRNOG00000029732|
rn6_v1_chr3_+_102529184_102529184	0.231278	Nkx3-1	ENSRNOT00000040444|Olr752|ENSRNOG00000029895|olfactory receptor 752 [Source:RGD Symbol%3BAcc:1333744]
rn6_v1_chr14_+_108415068_108415068	0.226884	Nkx3-1	ENSRNOT00000083763|Pus10|ENSRNOG00000054151|pseudouridylate synthase 10 [Source:RGD Symbol%3BAcc:1306402]
rn6_v1_chrM_+_9451_9451	0.220539	Nkx3-1	ENSRNOT00000041241|Mt-nd3|ENSRNOG00000033615|mitochondrially encoded NADH dehydrogenase 3 [Source:RGD Symbol%3BAcc:620557]
rn6_v1_chr10_-_91756081_91756081	0.220502	Nkx3-1	ENSRNOT00000005046|Gosr2|ENSRNOG00000003506|golgi SNAP receptor complex member 2 [Source:RGD Symbol%3BAcc:62079]
rn6_v1_chr1_-_185569190_185569190	0.219708	Nkx3-1	ENSRNOT00000090773|RGD1311703|ENSRNOG00000053659|similar to sid2057p [Source:RGD Symbol%3BAcc:1311703]
rn6_v1_chr1_+_75298364_75298364	0.207387	Nkx3-1	ENSRNOT00000018981|Vom1r61|ENSRNOG00000014181|vomeronasal 1 receptor 61 [Source:RGD Symbol%3BAcc:1359582]
rn6_v1_chr18_+_30820321_30820321	0.179706	Nkx3-1	ENSRNOT00000060472|Pcdhga3|ENSRNOG00000039461|protocadherin gamma subfamily A%2C 3 [Source:RGD Symbol%3BAcc:1598664]
rn6_v1_chr8_-_69531215_69531215	0.178179	Nkx3-1	ENSRNOT00000074153|AABR07070416.2|ENSRNOG00000050915|
rn6_v1_chr17_-_32015071_32015071	0.167767	Nkx3-1	ENSRNOT00000070876|LOC100911107|ENSRNOG00000048358|leukocyte elastase inhibitor A-like [Source:RGD Symbol%3BAcc:6495052]
rn6_v1_chr18_+_35136132_35136132	0.153014	Nkx3-1	ENSRNOT00000078731|Spink5|ENSRNOG00000013116|serine peptidase inhibitor%2C Kazal type 5 [Source:RGD Symbol%3BAcc:1306540]
rn6_v1_chr2_+_266317745_266317745	0.11388	Nkx3-1	ENSRNOT00000080305|Wls|ENSRNOG00000036816|wntless Wnt ligand secretion mediator [Source:RGD Symbol%3BAcc:735139]
rn6_v1_chr19_+_9668186_9668186	0.111709	Nkx3-1	ENSRNOT00000016563|Cnot1|ENSRNOG00000012271|CCR4-NOT transcription complex%2C subunit 1 [Source:RGD Symbol%3BAcc:1308009]
rn6_v1_chr5_+_137564607_137564607	0.105376	Nkx3-1	ENSRNOT00000075742|LOC100912529|ENSRNOG00000049347|olfactory receptor 2B6-like [Source:RGD Symbol%3BAcc:6486433]
rn6_v1_chr6_+_126874193_126874193	0.103071	Nkx3-1	ENSRNOT00000011775|Unc79|ENSRNOG00000008728|unc-79 homolog (C. elegans) [Source:RGD Symbol%3BAcc:1311117]
rn6_v1_chr18_+_56887722_56887722	0.0523574	Nkx3-1	ENSRNOT00000078783|Csnk1a1|ENSRNOG00000017106|casein kinase 1%2C alpha 1 [Source:RGD Symbol%3BAcc:71098]
rn6_v1_chr14_+_77322012_77322040	0.0304121	Nkx3-1	ENSRNOT00000088600|Zbtb49|ENSRNOG00000005633|zinc finger and BTB domain containing 49 [Source:RGD Symbol%3BAcc:1306733]	ENSRNOT00000041639|Zbtb49|ENSRNOG00000005633|zinc finger and BTB domain containing 49 [Source:RGD Symbol%3BAcc:1306733]
rn6_v1_chr17_+_47241017_47241017	0.00598159	Nkx3-1	ENSRNOT00000092193|Gpr141|ENSRNOG00000059698|G protein-coupled receptor 141 [Source:RGD Symbol%3BAcc:727906]
