rn6_v1_chr5_-_138462864_138462864	333.079	Rfx3_Rfx1_Rfx4	ENSRNOT00000011325|Ccdc30|ENSRNOG00000008560|coiled-coil domain containing 30 [Source:RGD Symbol%3BAcc:1305604]
rn6_v1_chr8_-_65587427_65587427	281.307	Rfx3_Rfx1_Rfx4	ENSRNOT00000016491|Lrrc49|ENSRNOG00000012015|leucine rich repeat containing 49 [Source:RGD Symbol%3BAcc:1309466]
rn6_v1_chr7_+_139762614_139762614	276.463	Rfx3_Rfx1_Rfx4	ENSRNOT00000031157|Ccdc184|ENSRNOG00000021945|coiled-coil domain containing 184 [Source:RGD Symbol%3BAcc:1593153]
rn6_v1_chr8_-_65587658_65587658	250.711	Rfx3_Rfx1_Rfx4	ENSRNOT00000091982|Lrrc49|ENSRNOG00000012015|leucine rich repeat containing 49 [Source:RGD Symbol%3BAcc:1309466]
rn6_v1_chr3_+_113251778_113251778	242.689	Rfx3_Rfx1_Rfx4	ENSRNOT00000083005|Map1a|ENSRNOG00000014230|microtubule-associated protein 1A [Source:RGD Symbol%3BAcc:3042]
rn6_v1_chr20_-_44220702_44220702	236.113	Rfx3_Rfx1_Rfx4	ENSRNOT00000036853|Fam229b|ENSRNOG00000024918|family with sequence similarity 229%2C member B [Source:RGD Symbol%3BAcc:2300149]
rn6_v1_chr20_-_14573519_14573519	226.601	Rfx3_Rfx1_Rfx4	ENSRNOT00000001772|Rab36|ENSRNOG00000001311|RAB36%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:1596098]
rn6_v1_chr16_+_2379480_2379480	218.395	Rfx3_Rfx1_Rfx4	ENSRNOT00000079215|Dnah12|ENSRNOG00000059865|dynein%2C axonemal%2C heavy chain 12 [Source:RGD Symbol%3BAcc:619990]
rn6_v1_chr19_+_56010085_56010085	213.806	Rfx3_Rfx1_Rfx4	ENSRNOT00000058216|Spata33|ENSRNOG00000038239|spermatogenesis associated 33 [Source:RGD Symbol%3BAcc:1561507]
rn6_v1_chr5_+_140870140_140870140	212.213	Rfx3_Rfx1_Rfx4	ENSRNOT00000074347|Hpcal4|ENSRNOG00000050983|hippocalcin-like 4 [Source:RGD Symbol%3BAcc:708491]
rn6_v1_chr2_-_89310946_89310946	206.964	Rfx3_Rfx1_Rfx4	ENSRNOT00000015195|Ralyl|ENSRNOG00000011400|RALY RNA binding protein-like [Source:RGD Symbol%3BAcc:1305844]
rn6_v1_chr2_-_195712461_195712461	204.283	Rfx3_Rfx1_Rfx4	ENSRNOT00000056449|Riiad1|ENSRNOG00000037310|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 [Source:RGD Symbol%3BAcc:2303311]
rn6_v1_chrX_-_15428518_15428518	202.291	Rfx3_Rfx1_Rfx4	ENSRNOT00000075774|LOC108348172|ENSRNOG00000046021|proSAAS [Source:RGD Symbol%3BAcc:11409911]
rn6_v1_chr13_-_90710148_90710287	196.359	Rfx3_Rfx1_Rfx4	ENSRNOT00000010113|Kcnj9|ENSRNOG00000007645|potassium voltage-gated channel subfamily J member 9 [Source:RGD Symbol%3BAcc:621440]	ENSRNOT00000080638|Kcnj9|ENSRNOG00000007645|potassium voltage-gated channel subfamily J member 9 [Source:RGD Symbol%3BAcc:621440]
rn6_v1_chr2_-_144467912_144467912	195.405	Rfx3_Rfx1_Rfx4	ENSRNOT00000040002|Ccna1|ENSRNOG00000014052|cyclin A1 [Source:RGD Symbol%3BAcc:1310639]
rn6_v1_chr15_-_104168564_104168638	195.305	Rfx3_Rfx1_Rfx4	ENSRNOT00000093385|Dzip1|ENSRNOG00000010311|DAZ interacting zinc finger protein 1 [Source:RGD Symbol%3BAcc:1307701]	ENSRNOT00000038596|Dzip1|ENSRNOG00000010311|DAZ interacting zinc finger protein 1 [Source:RGD Symbol%3BAcc:1307701]
rn6_v1_chr5_+_169519212_169519212	194.615	Rfx3_Rfx1_Rfx4	ENSRNOT00000024732|Chd5|ENSRNOG00000011268|chromodomain helicase DNA binding protein 5 [Source:RGD Symbol%3BAcc:1582725]
rn6_v1_chr11_+_88424414_88424414	194.138	Rfx3_Rfx1_Rfx4	ENSRNOT00000022328|Spag6l|ENSRNOG00000025787|sperm associated antigen 6-like [Source:RGD Symbol%3BAcc:1310892]
rn6_v1_chr1_-_266074181_266074181	190.228	Rfx3_Rfx1_Rfx4	ENSRNOT00000026378|Psd|ENSRNOG00000019435|pleckstrin and Sec7 domain containing [Source:RGD Symbol%3BAcc:620297]
rn6_v1_chr1_+_212230259_212230259	187.609	Rfx3_Rfx1_Rfx4	ENSRNOT00000034426|Kndc1|ENSRNOG00000027240|kinase non-catalytic C-lobe domain containing 1 [Source:RGD Symbol%3BAcc:1565261]
rn6_v1_chr10_-_47725172_47725172	187.362	Rfx3_Rfx1_Rfx4	ENSRNOT00000003228|Rnf112|ENSRNOG00000002364|ring finger protein 112 [Source:RGD Symbol%3BAcc:3986]
rn6_v1_chr10_-_58924137_58924137	187.101	Rfx3_Rfx1_Rfx4	ENSRNOT00000066740|Tekt1|ENSRNOG00000014973|tektin 1 [Source:RGD Symbol%3BAcc:619913]
rn6_v1_chr13_+_70157522_70157522	181.069	Rfx3_Rfx1_Rfx4	ENSRNOT00000036906|Apobec4|ENSRNOG00000028089|apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 [Source:RGD Symbol%3BAcc:1560256]
rn6_v1_chr1_+_78876205_78876205	180.08	Rfx3_Rfx1_Rfx4	ENSRNOT00000022610|Pnmal2|ENSRNOG00000016863|paraneoplastic Ma antigen family-like 2 [Source:RGD Symbol%3BAcc:1560435]
rn6_v1_chr15_+_40665041_40665041	179.556	Rfx3_Rfx1_Rfx4	ENSRNOT00000018300|Amer2|ENSRNOG00000013623|APC membrane recruitment protein 2 [Source:RGD Symbol%3BAcc:1559605]
rn6_v1_chr10_+_64174931_64174931	174.693	Rfx3_Rfx1_Rfx4	ENSRNOT00000035948|RGD1565611|ENSRNOG00000025287|RGD1565611 [Source:RGD Symbol%3BAcc:1565611]
rn6_v1_chr1_-_226501920_226501920	173.507	Rfx3_Rfx1_Rfx4	ENSRNOT00000050716|Lrrc10b|ENSRNOG00000030180|leucine rich repeat containing 10B [Source:RGD Symbol%3BAcc:1564983]
rn6_v1_chrX_-_15327684_15327684	172.401	Rfx3_Rfx1_Rfx4	ENSRNOT00000009794|Pcsk1n|ENSRNOG00000007112|proprotein convertase subtilisin/kexin type 1 inhibitor [Source:RGD Symbol%3BAcc:3617]
rn6_v1_chr20_+_41100071_41100071	171.936	Rfx3_Rfx1_Rfx4	ENSRNOT00000000658|Tspyl4|ENSRNOG00000000547|TSPY-like 4 [Source:RGD Symbol%3BAcc:1306653]
rn6_v1_chr5_-_147148291_147148291	168.532	Rfx3_Rfx1_Rfx4	ENSRNOT00000085151|Azin2|ENSRNOG00000051507|antizyme inhibitor 2 [Source:RGD Symbol%3BAcc:1564776]
rn6_v1_chr18_+_56193978_56194019	167.521	Rfx3_Rfx1_Rfx4	ENSRNOT00000041533|Camk2a|ENSRNOG00000018712|calcium/calmodulin-dependent protein kinase II alpha [Source:RGD Symbol%3BAcc:2261]	ENSRNOT00000080177|Camk2a|ENSRNOG00000018712|calcium/calmodulin-dependent protein kinase II alpha [Source:RGD Symbol%3BAcc:2261]
rn6_v1_chr10_-_47724499_47724499	163.075	Rfx3_Rfx1_Rfx4	ENSRNOT00000085011|Rnf112|ENSRNOG00000002364|ring finger protein 112 [Source:RGD Symbol%3BAcc:3986]
rn6_v1_chr1_+_220335254_220335254	162.889	Rfx3_Rfx1_Rfx4	ENSRNOT00000072261|Rin1|ENSRNOG00000050223|Ras and Rab interactor 1 [Source:RGD Symbol%3BAcc:620006]
rn6_v1_chr3_-_71295575_71295629	162.337	Rfx3_Rfx1_Rfx4	ENSRNOT00000040303|Zswim2|ENSRNOG00000032579|zinc finger%2C SWIM-type containing 2 [Source:RGD Symbol%3BAcc:1311373]	ENSRNOT00000083015|Zswim2|ENSRNOG00000032579|zinc finger%2C SWIM-type containing 2 [Source:RGD Symbol%3BAcc:1311373]
rn6_v1_chr2_-_211322719_211322719	160.731	Rfx3_Rfx1_Rfx4	ENSRNOT00000027493|RGD1310209|ENSRNOG00000020272|similar to KIAA1324 protein [Source:RGD Symbol%3BAcc:1310209]
rn6_v1_chr1_-_145931583_145931583	156.422	Rfx3_Rfx1_Rfx4	ENSRNOT00000016433|Cfap161|ENSRNOG00000012301|cilia and flagella associated protein 161 [Source:RGD Symbol%3BAcc:1310371]
rn6_v1_chr17_-_42226377_42226377	155.621	Rfx3_Rfx1_Rfx4	ENSRNOT00000024536|RGD1307443|ENSRNOG00000018141|similar to mKIAA0319 protein [Source:RGD Symbol%3BAcc:1307443]
rn6_v1_chr12_+_24803686_24803686	154.746	Rfx3_Rfx1_Rfx4	ENSRNOT00000033499|Wbscr28|ENSRNOG00000001474|Williams-Beuren syndrome chromosome region 28 [Source:RGD Symbol%3BAcc:1561903]
rn6_v1_chr1_-_212549477_212549477	154.711	Rfx3_Rfx1_Rfx4	ENSRNOT00000024765|Caly|ENSRNOG00000018337|calcyon neuron-specific vesicular protein [Source:RGD Symbol%3BAcc:621719]
rn6_v1_chr16_-_21338771_21338771	152.612	Rfx3_Rfx1_Rfx4	ENSRNOT00000014265|Pbx4|ENSRNOG00000010736|PBX homeobox 4 [Source:RGD Symbol%3BAcc:1305100]
rn6_v1_chr1_+_265298868_265298868	148.074	Rfx3_Rfx1_Rfx4	ENSRNOT00000023278|Dpcd|ENSRNOG00000017241|deleted in primary ciliary dyskinesia [Source:RGD Symbol%3BAcc:1307648]
rn6_v1_chr1_+_188571953_188571953	147.449	Rfx3_Rfx1_Rfx4	ENSRNOT00000055096|Iqck|ENSRNOG00000036758|IQ motif containing K [Source:RGD Symbol%3BAcc:6502881]
rn6_v1_chr1_+_220428481_220428481	144.618	Rfx3_Rfx1_Rfx4	ENSRNOT00000027335|LOC108348044|ENSRNOG00000020133|ras and Rab interactor 1 [Source:RGD Symbol%3BAcc:11459991]
rn6_v1_chr11_+_64975594_64975594	144.48	Rfx3_Rfx1_Rfx4	ENSRNOT00000040773|Maats1|ENSRNOG00000002976|MYCBP associated and testis expressed 1 [Source:RGD Symbol%3BAcc:1305539]
rn6_v1_chr8_-_13290773_13290773	144.46	Rfx3_Rfx1_Rfx4	ENSRNOT00000012217|RGD1561795|ENSRNOG00000009203|similar to RIKEN cDNA 1700012B09 [Source:RGD Symbol%3BAcc:1561795]
rn6_v1_chr14_+_17531398_17531398	143.833	Rfx3_Rfx1_Rfx4	ENSRNOT00000050038|Cdkl2|ENSRNOG00000002506|cyclin dependent kinase like 2 [Source:RGD Symbol%3BAcc:1309625]
rn6_v1_chr5_+_156026911_156026911	142.855	Rfx3_Rfx1_Rfx4	ENSRNOT00000046802|Rap1gap|ENSRNOG00000013825|Rap1 GTPase-activating protein [Source:RGD Symbol%3BAcc:1309908]
rn6_v1_chr7_+_142397371_142397413	142.229	Rfx3_Rfx1_Rfx4	ENSRNOT00000040890|Slc4a8|ENSRNOG00000028879|solute carrier family 4 member 8 [Source:RGD Symbol%3BAcc:735164]	ENSRNOT00000065379|Slc4a8|ENSRNOG00000028879|solute carrier family 4 member 8 [Source:RGD Symbol%3BAcc:735164]
rn6_v1_chr13_-_105684374_105684374	141.661	Rfx3_Rfx1_Rfx4	ENSRNOT00000073142|Spata17|ENSRNOG00000002504|spermatogenesis associated 17 [Source:RGD Symbol%3BAcc:1565282]
rn6_v1_chr1_-_212548730_212548730	141.296	Rfx3_Rfx1_Rfx4	ENSRNOT00000089729|Caly|ENSRNOG00000018337|calcyon neuron-specific vesicular protein [Source:RGD Symbol%3BAcc:621719]
rn6_v1_chr8_-_130475320_130475320	141.112	Rfx3_Rfx1_Rfx4	ENSRNOT00000075439|Ccdc13|ENSRNOG00000025643|coiled-coil domain containing 13 [Source:RGD Symbol%3BAcc:1586605]
rn6_v1_chr12_-_22811058_22811058	140.104	Rfx3_Rfx1_Rfx4	ENSRNOT00000046412|Ift22|ENSRNOG00000031346|intraflagellar transport 22 [Source:RGD Symbol%3BAcc:1305370]
rn6_v1_chr12_+_2534212_2534212	138.914	Rfx3_Rfx1_Rfx4	ENSRNOT00000001399|Ctxn1|ENSRNOG00000001057|cortexin 1 [Source:RGD Symbol%3BAcc:2449]
rn6_v1_chr8_-_25829569_25829569	138.867	Rfx3_Rfx1_Rfx4	ENSRNOT00000071884|Dpy19l2|ENSRNOG00000045585|dpy-19 like 2 [Source:RGD Symbol%3BAcc:1564311]
rn6_v1_chr1_+_201337416_201337416	138.746	Rfx3_Rfx1_Rfx4	ENSRNOT00000067742|Btbd16|ENSRNOG00000036675|BTB domain containing 16 [Source:RGD Symbol%3BAcc:1311454]
rn6_v1_chr12_+_17614632_17614632	138.489	Rfx3_Rfx1_Rfx4	ENSRNOT00000031896|Prkar1b|ENSRNOG00000028733|protein kinase cAMP-dependent type 1 regulatory subunit beta [Source:RGD Symbol%3BAcc:3392]
rn6_v1_chr6_+_2969333_2969333	138.287	Rfx3_Rfx1_Rfx4	ENSRNOT00000047356|Morn2|ENSRNOG00000030319|MORN repeat containing 2 [Source:RGD Symbol%3BAcc:1563988]
rn6_v1_chr17_-_88095729_88095729	136.956	Rfx3_Rfx1_Rfx4	ENSRNOT00000025140|Enkur|ENSRNOG00000018631|enkurin%2C TRPC channel interacting protein [Source:RGD Symbol%3BAcc:1309839]
rn6_v1_chr3_-_102151489_102151489	136.123	Rfx3_Rfx1_Rfx4	ENSRNOT00000006349|Ano3|ENSRNOG00000004731|anoctamin 3 [Source:RGD Symbol%3BAcc:1308873]
rn6_v1_chr5_-_143062226_143062226	136.093	Rfx3_Rfx1_Rfx4	ENSRNOT00000029388|Dnali1|ENSRNOG00000024957|dynein%2C axonemal%2C light intermediate chain 1 [Source:RGD Symbol%3BAcc:1309260]
rn6_v1_chr1_+_78893271_78893271	135.798	Rfx3_Rfx1_Rfx4	ENSRNOT00000029825|Pnmal1|ENSRNOG00000027944|paraneoplastic Ma antigen family-like 1 [Source:RGD Symbol%3BAcc:1310803]
rn6_v1_chr9_+_88964525_88964525	134.61	Rfx3_Rfx1_Rfx4	ENSRNOT00000068236|Daw1|ENSRNOG00000016247|dynein assembly factor with WD repeats 1 [Source:RGD Symbol%3BAcc:1561436]
rn6_v1_chr10_+_38919167_38919167	133.504	Rfx3_Rfx1_Rfx4	ENSRNOT00000077569|Kif3a|ENSRNOG00000007515|kinesin family member 3a [Source:RGD Symbol%3BAcc:621536]
rn6_v1_chr7_-_120744602_120744602	133.408	Rfx3_Rfx1_Rfx4	ENSRNOT00000018564|Kcnj4|ENSRNOG00000013869|potassium voltage-gated channel subfamily J member 4 [Source:RGD Symbol%3BAcc:621436]
rn6_v1_chr10_-_54512169_54512169	133.158	Rfx3_Rfx1_Rfx4	ENSRNOT00000005066|Cfap52|ENSRNOG00000037718|cilia and flagella associated protein 52 [Source:RGD Symbol%3BAcc:1308151]
rn6_v1_chr10_-_103340922_103340922	132.749	Rfx3_Rfx1_Rfx4	ENSRNOT00000004191|Btbd17|ENSRNOG00000003109|BTB domain containing 17 [Source:RGD Symbol%3BAcc:1563331]
rn6_v1_chr10_+_38918748_38918748	131.248	Rfx3_Rfx1_Rfx4	ENSRNOT00000009999|Kif3a|ENSRNOG00000007515|kinesin family member 3a [Source:RGD Symbol%3BAcc:621536]
rn6_v1_chr4_-_157304653_157304653	129.724	Rfx3_Rfx1_Rfx4	ENSRNOT00000051613|Lrrc23|ENSRNOG00000026309|leucine rich repeat containing 23 [Source:RGD Symbol%3BAcc:1304779]
rn6_v1_chr5_-_160555083_160555083	128.078	Rfx3_Rfx1_Rfx4	ENSRNOT00000018953|Fhad1|ENSRNOG00000028064|forkhead associated phosphopeptide binding domain 1 [Source:RGD Symbol%3BAcc:1563444]
rn6_v1_chr16_-_39970532_39970532	127.365	Rfx3_Rfx1_Rfx4	ENSRNOT00000071331|Spata4|ENSRNOG00000048035|spermatogenesis associated 4 [Source:RGD Symbol%3BAcc:1303065]
rn6_v1_chr14_-_43584343_43584343	124.797	Rfx3_Rfx1_Rfx4	ENSRNOT00000039835|Nsun7|ENSRNOG00000025494|NOP2/Sun RNA methyltransferase family member 7 [Source:RGD Symbol%3BAcc:1310137]
rn6_v1_chr8_-_55491152_55491152	124.706	Rfx3_Rfx1_Rfx4	ENSRNOT00000014965|LOC100359479|ENSRNOG00000043383|rCG58364-like [Source:RGD Symbol%3BAcc:2323814]
rn6_v1_chr18_-_38088457_38088457	122.928	Rfx3_Rfx1_Rfx4	ENSRNOT00000077814|Jakmip2|ENSRNOG00000019159|janus kinase and microtubule interacting protein 2 [Source:RGD Symbol%3BAcc:1559742]
rn6_v1_chr5_-_59165160_59165160	122.608	Rfx3_Rfx1_Rfx4	ENSRNOT00000029035|Fam221b|ENSRNOG00000025453|family with sequence similarity 221%2C member B [Source:RGD Symbol%3BAcc:1310425]
rn6_v1_chr9_-_65693822_65693822	122.506	Rfx3_Rfx1_Rfx4	ENSRNOT00000038431|Als2cr12|ENSRNOG00000024917|amyotrophic lateral sclerosis 2 chromosome region%2C candidate 12 [Source:RGD Symbol%3BAcc:1359362]
rn6_v1_chrX_+_122808605_122808605	120.797	Rfx3_Rfx1_Rfx4	ENSRNOT00000017567|Zcchc12|ENSRNOG00000013162|zinc finger CCHC-type containing 12 [Source:RGD Symbol%3BAcc:1359439]
rn6_v1_chr11_-_90234286_90234286	120.728	Rfx3_Rfx1_Rfx4	ENSRNOT00000071986|Efcab1|ENSRNOG00000050091|EF hand calcium binding domain 1 [Source:RGD Symbol%3BAcc:1594548]
rn6_v1_chr9_-_17114177_17114177	119.437	Rfx3_Rfx1_Rfx4	ENSRNOT00000061185|Lrrc73|ENSRNOG00000039856|leucine rich repeat containing 73 [Source:RGD Symbol%3BAcc:1561390]
rn6_v1_chr1_+_196737627_196737627	119.383	Rfx3_Rfx1_Rfx4	ENSRNOT00000066652|LOC100271845|ENSRNOG00000042706|hypothetical protein LOC100271845 [Source:RGD Symbol%3BAcc:2304343]
rn6_v1_chr6_-_108076186_108076186	118.847	Rfx3_Rfx1_Rfx4	ENSRNOT00000014814|Fam161b|ENSRNOG00000011112|family with sequence similarity 161%2C member B [Source:RGD Symbol%3BAcc:1309058]
rn6_v1_chr8_+_116302513_116302513	118.424	Rfx3_Rfx1_Rfx4	ENSRNOT00000039258|Zmynd10|ENSRNOG00000021602|zinc finger%2C MYND-type containing 10 [Source:RGD Symbol%3BAcc:1303250]
rn6_v1_chr19_-_10380809_10380809	117.544	Rfx3_Rfx1_Rfx4	ENSRNOT00000031064|Drc7|ENSRNOG00000025860|dynein regulatory complex subunit 7 [Source:RGD Symbol%3BAcc:1565601]
rn6_v1_chr4_+_2053712_2053712	117.185	Rfx3_Rfx1_Rfx4	ENSRNOT00000045086|Rnf32|ENSRNOG00000005691|ring finger protein 32 [Source:RGD Symbol%3BAcc:1308287]
rn6_v1_chr3_+_7279340_7279340	116.511	Rfx3_Rfx1_Rfx4	ENSRNOT00000017029|Ak8|ENSRNOG00000012761|adenylate kinase 8 [Source:RGD Symbol%3BAcc:1303144]
rn6_v1_chr14_+_8080275_8080277	115.163	Rfx3_Rfx1_Rfx4	ENSRNOT00000065965|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]	ENSRNOT00000092542|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]
rn6_v1_chr9_+_27068443_27068443	114.541	Rfx3_Rfx1_Rfx4	ENSRNOT00000017393|Efhc1|ENSRNOG00000042729|EF-hand domain containing 1 [Source:RGD Symbol%3BAcc:1587365]
rn6_v1_chr9_+_20241062_20241062	112.469	Rfx3_Rfx1_Rfx4	ENSRNOT00000071593|LOC100911585|ENSRNOG00000047890|leucine-rich repeat-containing protein 23-like [Source:RGD Symbol%3BAcc:6491966]
rn6_v1_chr7_-_129970550_129970550	110.878	Rfx3_Rfx1_Rfx4	ENSRNOT00000055879|Mlc1|ENSRNOG00000032871|megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:RGD Symbol%3BAcc:1308552]
rn6_v1_chr5_+_131719922_131719922	109.784	Rfx3_Rfx1_Rfx4	ENSRNOT00000010524|Spata6|ENSRNOG00000007568|spermatogenesis associated 6 [Source:RGD Symbol%3BAcc:628657]
rn6_v1_chr5_+_144067416_144067416	109.52	Rfx3_Rfx1_Rfx4	ENSRNOT00000037246|Oscp1|ENSRNOG00000026978|organic solute carrier partner 1 [Source:RGD Symbol%3BAcc:1306596]
rn6_v1_chr9_-_13311924_13311924	108.831	Rfx3_Rfx1_Rfx4	ENSRNOT00000015584|Kif6|ENSRNOG00000011453|kinesin family member 6 [Source:RGD Symbol%3BAcc:621070]
rn6_v1_chr13_+_90909486_90909486	108.629	Rfx3_Rfx1_Rfx4	ENSRNOT00000011450|Cfap45|ENSRNOG00000008492|cilia and flagella associated protein 45 [Source:RGD Symbol%3BAcc:1561559]
rn6_v1_chr3_+_15379109_15379109	107.051	Rfx3_Rfx1_Rfx4	ENSRNOT00000036495|Morn5|ENSRNOG00000026111|MORN repeat containing 5 [Source:RGD Symbol%3BAcc:1307739]
rn6_v1_chr4_+_114854458_114854458	105.906	Rfx3_Rfx1_Rfx4	ENSRNOT00000013312|LOC500227|ENSRNOG00000009917|hypothetical gene supported by BC079424 [Source:RGD Symbol%3BAcc:1566019]
rn6_v1_chr2_-_231521052_231521052	105.44	Rfx3_Rfx1_Rfx4	ENSRNOT00000089534|Ank2|ENSRNOG00000011076|ankyrin 2 [Source:RGD Symbol%3BAcc:620156]	ENSRNOT00000080470|Ank2|ENSRNOG00000011076|ankyrin 2 [Source:RGD Symbol%3BAcc:620156]	ENSRNOT00000084756|Ank2|ENSRNOG00000011076|ankyrin 2 [Source:RGD Symbol%3BAcc:620156]
rn6_v1_chr6_+_7900972_7901018	104.408	Rfx3_Rfx1_Rfx4	ENSRNOT00000006953|Dync2li1|ENSRNOG00000005151|dynein cytoplasmic 2 light intermediate chain 1 [Source:RGD Symbol%3BAcc:1310286]	ENSRNOT00000068030|Dync2li1|ENSRNOG00000005151|dynein cytoplasmic 2 light intermediate chain 1 [Source:RGD Symbol%3BAcc:1310286]
rn6_v1_chr13_+_82574966_82574966	104.404	Rfx3_Rfx1_Rfx4	ENSRNOT00000003844|Ccdc181|ENSRNOG00000002860|coiled-coil domain containing 181 [Source:RGD Symbol%3BAcc:1309708]
rn6_v1_chr7_-_54855557_54855557	104.383	Rfx3_Rfx1_Rfx4	ENSRNOT00000039475|Glipr1l1|ENSRNOG00000026634|GLI pathogenesis-related 1 like 1 [Source:RGD Symbol%3BAcc:1563000]
rn6_v1_chr5_-_59149625_59149699	104.359	Rfx3_Rfx1_Rfx4	ENSRNOT00000040641|Spag8|ENSRNOG00000032539|sperm associated antigen 8 [Source:RGD Symbol%3BAcc:1307079]	ENSRNOT00000084216|Spag8|ENSRNOG00000032539|sperm associated antigen 8 [Source:RGD Symbol%3BAcc:1307079]
rn6_v1_chr1_-_220165678_220165678	104.056	Rfx3_Rfx1_Rfx4	ENSRNOT00000026915|Bbs1|ENSRNOG00000019832|Bardet-Biedl syndrome 1 [Source:RGD Symbol%3BAcc:1307581]
rn6_v1_chr7_+_94375020_94375020	102.677	Rfx3_Rfx1_Rfx4	ENSRNOT00000011904|Nov|ENSRNOG00000008697|nephroblastoma overexpressed [Source:RGD Symbol%3BAcc:621553]
rn6_v1_chr12_+_14092541_14092541	101.035	Rfx3_Rfx1_Rfx4	ENSRNOT00000033998|Radil|ENSRNOG00000024456|Rap associating with DIL domain [Source:RGD Symbol%3BAcc:1306155]
rn6_v1_chr10_+_54126486_54126486	100.671	Rfx3_Rfx1_Rfx4	ENSRNOT00000078820|Gas7|ENSRNOG00000049361|growth arrest specific 7 [Source:RGD Symbol%3BAcc:621550]
rn6_v1_chr6_+_2886764_2886764	100.562	Rfx3_Rfx1_Rfx4	ENSRNOT00000023114|Ttc39d|ENSRNOG00000027343|tetratricopeptide repeat domain 39D [Source:RGD Symbol%3BAcc:1311615]
rn6_v1_chr8_+_90343154_90343154	100.137	Rfx3_Rfx1_Rfx4	ENSRNOT00000068482|Irak1bp1|ENSRNOG00000008984|interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:RGD Symbol%3BAcc:1305012]
rn6_v1_chr10_-_56154548_56154548	99.6597	Rfx3_Rfx1_Rfx4	ENSRNOT00000090809|Dnah2|ENSRNOG00000052688|dynein%2C axonemal%2C heavy chain 2 [Source:RGD Symbol%3BAcc:1565087]
rn6_v1_chr11_-_64421248_64421248	98.3774	Rfx3_Rfx1_Rfx4	ENSRNOT00000066997|Igsf11|ENSRNOG00000001525|immunoglobulin superfamily%2C member 11 [Source:RGD Symbol%3BAcc:1308758]
rn6_v1_chr1_-_52354175_52354175	98.3521	Rfx3_Rfx1_Rfx4	ENSRNOT00000015010|MGC94891|ENSRNOG00000011243|hypothetical protein LOC681210 [Source:RGD Symbol%3BAcc:1598061]
rn6_v1_chr7_-_74901997_74901997	97.8639	Rfx3_Rfx1_Rfx4	ENSRNOT00000039378|Rgs22|ENSRNOG00000025551|regulator of G-protein signaling 22 [Source:RGD Symbol%3BAcc:1565493]
rn6_v1_chr8_-_6235967_6235967	97.7281	Rfx3_Rfx1_Rfx4	ENSRNOT00000068290|LOC654482|ENSRNOG00000043410|hypothetical protein LOC654482 [Source:RGD Symbol%3BAcc:1591894]
rn6_v1_chr17_+_6701315_6701420	97.707	Rfx3_Rfx1_Rfx4	ENSRNOT00000026054|Kif27|ENSRNOG00000019257|kinesin family member 27 [Source:RGD Symbol%3BAcc:621071]	ENSRNOT00000080683|Kif27|ENSRNOG00000019257|kinesin family member 27 [Source:RGD Symbol%3BAcc:621071]
rn6_v1_chr4_+_138269142_138269142	97.5747	Rfx3_Rfx1_Rfx4	ENSRNOT00000007788|Cntn4|ENSRNOG00000005652|contactin 4 [Source:RGD Symbol%3BAcc:621361]
rn6_v1_chr7_-_144837583_144837583	96.8261	Rfx3_Rfx1_Rfx4	ENSRNOT00000055289|Cbx5|ENSRNOG00000036841|chromobox 5 [Source:RGD Symbol%3BAcc:1306619]
rn6_v1_chr5_-_136706936_136706998	96.7371	Rfx3_Rfx1_Rfx4	ENSRNOT00000081925|Ccdc24|ENSRNOG00000019586|coiled-coil domain containing 24 [Source:RGD Symbol%3BAcc:1562911]	ENSRNOT00000068130|Ccdc24|ENSRNOG00000019586|coiled-coil domain containing 24 [Source:RGD Symbol%3BAcc:1562911]
rn6_v1_chr3_+_129501105_129501105	96.6717	Rfx3_Rfx1_Rfx4	ENSRNOT00000007893|Ankef1|ENSRNOG00000005792|ankyrin repeat and EF-hand domain containing 1 [Source:RGD Symbol%3BAcc:1304809]
rn6_v1_chr1_-_199037267_199037267	95.7582	Rfx3_Rfx1_Rfx4	ENSRNOT00000078779|Ccdc189|ENSRNOG00000053015|coiled-coil domain containing 189 [Source:RGD Symbol%3BAcc:1593368]
rn6_v1_chr4_+_66090681_66090681	95.7158	Rfx3_Rfx1_Rfx4	ENSRNOT00000078066|Ttc26|ENSRNOG00000027617|tetratricopeptide repeat domain 26 [Source:RGD Symbol%3BAcc:1561363]
rn6_v1_chr5_-_157165767_157165767	94.3578	Rfx3_Rfx1_Rfx4	ENSRNOT00000000167|Ubxn10|ENSRNOG00000027731|UBX domain protein 10 [Source:RGD Symbol%3BAcc:1308335]
rn6_v1_chr12_+_7454884_7454884	93.0372	Rfx3_Rfx1_Rfx4	ENSRNOT00000077328|LOC100910196|ENSRNOG00000047618|katanin p60 ATPase-containing subunit A-like 1-like [Source:RGD Symbol%3BAcc:6499844]
rn6_v1_chr18_-_73360373_73360373	92.7714	Rfx3_Rfx1_Rfx4	ENSRNOT00000048702|Katnal2|ENSRNOG00000017788|katanin catalytic subunit A1 like 2 [Source:RGD Symbol%3BAcc:1564708]
rn6_v1_chr1_+_84070983_84070983	91.4717	Rfx3_Rfx1_Rfx4	ENSRNOT00000090478|Numbl|ENSRNOG00000020867|NUMB-like%2C endocytic adaptor protein [Source:RGD Symbol%3BAcc:1307579]
rn6_v1_chr9_+_76913639_76913639	91.042	Rfx3_Rfx1_Rfx4	ENSRNOT00000089203|AABR07068007.2|ENSRNOG00000054475|
rn6_v1_chr8_+_55050284_55050284	91.0325	Rfx3_Rfx1_Rfx4	ENSRNOT00000013242|Pih1d2|ENSRNOG00000009965|PIH1 domain containing 2 [Source:RGD Symbol%3BAcc:1310503]
rn6_v1_chr10_+_37458452_37458452	90.47	Rfx3_Rfx1_Rfx4	ENSRNOT00000079411|Cdkl3|ENSRNOG00000059485|cyclin-dependent kinase-like 3 [Source:RGD Symbol%3BAcc:619874]
rn6_v1_chr14_+_8080565_8080565	90.4624	Rfx3_Rfx1_Rfx4	ENSRNOT00000092395|Mapk10|ENSRNOG00000002079|mitogen activated protein kinase 10 [Source:RGD Symbol%3BAcc:3663]
rn6_v1_chr14_-_82055290_82055290	89.8271	Rfx3_Rfx1_Rfx4	ENSRNOT00000058062|RGD1560394|ENSRNOG00000038150|RGD1560394 [Source:RGD Symbol%3BAcc:1560394]
rn6_v1_chr20_+_4369178_4369178	89.5031	Rfx3_Rfx1_Rfx4	ENSRNOT00000088079|Agpat1|ENSRNOG00000000437|1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:RGD Symbol%3BAcc:1303287]
rn6_v1_chr1_+_211543751_211543751	89.4251	Rfx3_Rfx1_Rfx4	ENSRNOT00000049631|Lrrc27|ENSRNOG00000017538|leucine rich repeat containing 27 [Source:RGD Symbol%3BAcc:1559981]
rn6_v1_chr10_+_55653946_55653946	88.2187	Rfx3_Rfx1_Rfx4	ENSRNOT00000008787|Tmem107|ENSRNOG00000006519|transmembrane protein 107 [Source:RGD Symbol%3BAcc:1595972]
rn6_v1_chr4_+_62299044_62299044	86.6472	Rfx3_Rfx1_Rfx4	ENSRNOT00000032077|Agbl3|ENSRNOG00000010397|ATP/GTP binding protein-like 3 [Source:RGD Symbol%3BAcc:1561995]
rn6_v1_chr4_-_135069970_135069970	84.958	Rfx3_Rfx1_Rfx4	ENSRNOT00000008221|Cntn3|ENSRNOG00000006144|contactin 3 [Source:RGD Symbol%3BAcc:3253]
rn6_v1_chr1_-_247088012_247088012	84.5619	Rfx3_Rfx1_Rfx4	ENSRNOT00000020464|Spata6l|ENSRNOG00000015137|spermatogenesis associated 6-like [Source:RGD Symbol%3BAcc:1310039]
rn6_v1_chr14_-_113644779_113644779	82.7306	Rfx3_Rfx1_Rfx4	ENSRNOT00000005306|Cfap36|ENSRNOG00000003901|cilia and flagella associated protein 36 [Source:RGD Symbol%3BAcc:1311732]
rn6_v1_chrX_+_105134498_105134498	82.6576	Rfx3_Rfx1_Rfx4	ENSRNOT00000002058|Tmem35|ENSRNOG00000001506|transmembrane protein 35 [Source:RGD Symbol%3BAcc:1303093]
rn6_v1_chr6_-_107633012_107633012	82.6345	Rfx3_Rfx1_Rfx4	ENSRNOT00000014018|Pnma1|ENSRNOG00000010553|paraneoplastic Ma antigen 1 [Source:RGD Symbol%3BAcc:621230]
rn6_v1_chr8_-_5429581_5429581	82.5848	Rfx3_Rfx1_Rfx4	ENSRNOT00000044174|Dync2h1|ENSRNOG00000032070|dynein cytoplasmic 2 heavy chain 1 [Source:RGD Symbol%3BAcc:71042]
rn6_v1_chr20_-_14620019_14620019	82.3552	Rfx3_Rfx1_Rfx4	ENSRNOT00000001779|Gnaz|ENSRNOG00000001313|G protein subunit alpha z [Source:RGD Symbol%3BAcc:2717]
rn6_v1_chr3_-_62803373_62803373	81.9874	Rfx3_Rfx1_Rfx4	ENSRNOT00000013565|Ttc30a1|ENSRNOG00000052519|tetratricopeptide repeat domain 30A1 [Source:RGD Symbol%3BAcc:1560121]
rn6_v1_chr2_-_208623314_208623314	81.6869	Rfx3_Rfx1_Rfx4	ENSRNOT00000022731|Pifo|ENSRNOG00000016842|primary cilia formation [Source:RGD Symbol%3BAcc:1586282]
rn6_v1_chr12_+_16030788_16030788	81.4549	Rfx3_Rfx1_Rfx4	ENSRNOT00000051565|Iqce|ENSRNOG00000001241|IQ motif containing E [Source:RGD Symbol%3BAcc:1311349]
rn6_v1_chr7_+_12433933_12433933	80.9338	Rfx3_Rfx1_Rfx4	ENSRNOT00000060690|Cbarp|ENSRNOG00000024349|CACN beta subunit associated regulatory protein [Source:RGD Symbol%3BAcc:1307185]
rn6_v1_chrX_-_16306078_16306078	80.9315	Rfx3_Rfx1_Rfx4	ENSRNOT00000003939|Akap4|ENSRNOG00000002921|A-kinase anchoring protein 4 [Source:RGD Symbol%3BAcc:620828]
rn6_v1_chr19_-_10653800_10653800	79.1103	Rfx3_Rfx1_Rfx4	ENSRNOT00000022128|Cx3cl1|ENSRNOG00000016326|C-X3-C motif chemokine ligand 1 [Source:RGD Symbol%3BAcc:620458]
rn6_v1_chr1_+_203971152_203971152	78.9346	Rfx3_Rfx1_Rfx4	ENSRNOT00000075540|Gpr26|ENSRNOG00000047057|G protein-coupled receptor 26 [Source:RGD Symbol%3BAcc:619843]
rn6_v1_chr8_-_14156656_14156656	78.8354	Rfx3_Rfx1_Rfx4	ENSRNOT00000089364|Deup1|ENSRNOG00000061247|deuterosome assembly protein 1 [Source:RGD Symbol%3BAcc:1306632]
rn6_v1_chr5_+_61474000_61474000	78.4898	Rfx3_Rfx1_Rfx4	ENSRNOT00000013930|Ccdc180|ENSRNOG00000010412|coiled-coil domain containing 180 [Source:RGD Symbol%3BAcc:6498132]
rn6_v1_chr4_+_147756553_147756695	77.9369	Rfx3_Rfx1_Rfx4	ENSRNOT00000086549|Ift122|ENSRNOG00000010952|intraflagellar transport 122 [Source:RGD Symbol%3BAcc:1311302]	ENSRNOT00000014733|Ift122|ENSRNOG00000010952|intraflagellar transport 122 [Source:RGD Symbol%3BAcc:1311302]
rn6_v1_chr12_+_47551935_47551935	77.9187	Rfx3_Rfx1_Rfx4	ENSRNOT00000056932|RGD1560398|ENSRNOG00000037566|RGD1560398 [Source:RGD Symbol%3BAcc:1560398]
rn6_v1_chr7_-_120380200_120380200	77.8466	Rfx3_Rfx1_Rfx4	ENSRNOT00000014878|RGD1359634|ENSRNOG00000011170|similar to RIKEN cDNA 1700088E04 [Source:RGD Symbol%3BAcc:1359634]
rn6_v1_chr11_-_71601662_71601662	77.0836	Rfx3_Rfx1_Rfx4	ENSRNOT00000002397|Tctex1d2|ENSRNOG00000001758|Tctex1 domain containing 2 [Source:RGD Symbol%3BAcc:1563597]
rn6_v1_chr8_-_61519507_61519507	76.6349	Rfx3_Rfx1_Rfx4	ENSRNOT00000038347|Odf3l1|ENSRNOG00000027109|outer dense fiber of sperm tails 3-like 1 [Source:RGD Symbol%3BAcc:1304976]
rn6_v1_chr19_+_52225582_52225582	76.3841	Rfx3_Rfx1_Rfx4	ENSRNOT00000020917|Dnaaf1|ENSRNOG00000015590|dynein%2C axonemal%2C assembly factor 1 [Source:RGD Symbol%3BAcc:1310542]
rn6_v1_chr3_+_176721827_176721827	75.927	Rfx3_Rfx1_Rfx4	ENSRNOT00000066617|Fndc11|ENSRNOG00000013243|fibronectin type III domain containing 11 [Source:RGD Symbol%3BAcc:1564340]
rn6_v1_chr1_+_205842489_205842489	75.7169	Rfx3_Rfx1_Rfx4	ENSRNOT00000081610|Fank1|ENSRNOG00000018327|fibronectin type 3 and ankyrin repeat domains 1 [Source:RGD Symbol%3BAcc:1304756]
rn6_v1_chr8_-_14157141_14157141	74.2171	Rfx3_Rfx1_Rfx4	ENSRNOT00000079034|Deup1|ENSRNOG00000061247|deuterosome assembly protein 1 [Source:RGD Symbol%3BAcc:1306632]
rn6_v1_chr4_+_86275717_86275717	73.8067	Rfx3_Rfx1_Rfx4	ENSRNOT00000016414|Ppp1r17|ENSRNOG00000012235|protein phosphatase 1%2C regulatory subunit 17 [Source:RGD Symbol%3BAcc:628647]
rn6_v1_chr5_-_122642202_122642202	73.7699	Rfx3_Rfx1_Rfx4	ENSRNOT00000046691|Wdr78|ENSRNOG00000006999|WD repeat domain 78 [Source:RGD Symbol%3BAcc:1311027]
rn6_v1_chr8_+_127789048_127789048	73.5168	Rfx3_Rfx1_Rfx4	ENSRNOT00000052275|Dlec1|ENSRNOG00000032085|deleted in lung and esophageal cancer 1 [Source:RGD Symbol%3BAcc:1561649]
rn6_v1_chr8_-_59077690_59077690	73.1552	Rfx3_Rfx1_Rfx4	ENSRNOT00000066197|Dmxl2|ENSRNOG00000009170|Dmx-like 2 [Source:RGD Symbol%3BAcc:1586163]
rn6_v1_chr4_+_159403501_159403501	73.0798	Rfx3_Rfx1_Rfx4	ENSRNOT00000086525|Akap3|ENSRNOG00000059227|A-kinase anchoring protein 3 [Source:RGD Symbol%3BAcc:1359735]
rn6_v1_chr5_-_110706656_110706656	72.9841	Rfx3_Rfx1_Rfx4	ENSRNOT00000033781|Izumo3|ENSRNOG00000022488|IZUMO family member 3 [Source:RGD Symbol%3BAcc:2324467]
rn6_v1_chr8_-_68525911_68525924	72.7626	Rfx3_Rfx1_Rfx4	ENSRNOT00000080588|Iqch|ENSRNOG00000008353|IQ motif containing H [Source:RGD Symbol%3BAcc:1310670]	ENSRNOT00000011109|Iqch|ENSRNOG00000008353|IQ motif containing H [Source:RGD Symbol%3BAcc:1310670]
rn6_v1_chr11_-_31238026_31238026	72.6999	Rfx3_Rfx1_Rfx4	ENSRNOT00000032366|RGD1562726|ENSRNOG00000028670|similar to Putative protein C21orf62 homolog [Source:RGD Symbol%3BAcc:1562726]
rn6_v1_chr2_+_228544418_228544418	72.0034	Rfx3_Rfx1_Rfx4	ENSRNOT00000013030|Tram1l1|ENSRNOG00000009835|translocation associated membrane protein 1-like 1 [Source:RGD Symbol%3BAcc:1306398]
rn6_v1_chr8_-_23014499_23014499	71.7835	Rfx3_Rfx1_Rfx4	ENSRNOT00000017820|Ccdc151|ENSRNOG00000013263|coiled-coil domain containing 151 [Source:RGD Symbol%3BAcc:1310048]
rn6_v1_chr1_-_48825364_48825364	70.6881	Rfx3_Rfx1_Rfx4	ENSRNOT00000024213|Agpat4|ENSRNOG00000017731|1-acylglycerol-3-phosphate O-acyltransferase 4 [Source:RGD Symbol%3BAcc:619916]
rn6_v1_chr10_-_74679858_74679858	70.1793	Rfx3_Rfx1_Rfx4	ENSRNOT00000003859|Ppm1e|ENSRNOG00000024730|protein phosphatase%2C Mg2+/Mn2+ dependent%2C 1E [Source:RGD Symbol%3BAcc:735028]
rn6_v1_chr7_+_119647375_119647375	69.584	Rfx3_Rfx1_Rfx4	ENSRNOT00000046563|Kctd17|ENSRNOG00000000231|potassium channel tetramerization domain containing 17 [Source:RGD Symbol%3BAcc:1311154]
rn6_v1_chr3_+_151335292_151335292	69.3059	Rfx3_Rfx1_Rfx4	ENSRNOT00000073642|Mmp24|ENSRNOG00000047028|matrix metallopeptidase 24 [Source:RGD Symbol%3BAcc:620202]
rn6_v1_chr11_+_42858478_42858478	69.0884	Rfx3_Rfx1_Rfx4	ENSRNOT00000002293|Arl6|ENSRNOG00000001689|ADP-ribosylation factor like GTPase 6 [Source:RGD Symbol%3BAcc:1305535]
rn6_v1_chr12_-_6703979_6703979	69.009	Rfx3_Rfx1_Rfx4	ENSRNOT00000061246|Tex26|ENSRNOG00000000905|testis expressed 26 [Source:RGD Symbol%3BAcc:1560846]
rn6_v1_chr3_-_45210474_45210474	68.8078	Rfx3_Rfx1_Rfx4	ENSRNOT00000091777|Ccdc148|ENSRNOG00000057740|coiled-coil domain containing 148 [Source:RGD Symbol%3BAcc:1561169]
rn6_v1_chr9_+_81644355_81644355	68.579	Rfx3_Rfx1_Rfx4	ENSRNOT00000071700|Catip|ENSRNOG00000037835|ciliogenesis associated TTC17 interacting protein [Source:RGD Symbol%3BAcc:1596071]
rn6_v1_chr19_-_44158621_44158624	68.3203	Rfx3_Rfx1_Rfx4	ENSRNOT00000031243|Tmem231|ENSRNOG00000021517|transmembrane protein 231 [Source:RGD Symbol%3BAcc:1306153]	ENSRNOT00000088297|Tmem231|ENSRNOG00000021517|transmembrane protein 231 [Source:RGD Symbol%3BAcc:1306153]
rn6_v1_chr14_-_84393421_84393421	67.9403	Rfx3_Rfx1_Rfx4	ENSRNOT00000006911|Ccdc157|ENSRNOG00000005147|coiled-coil domain containing 157 [Source:RGD Symbol%3BAcc:1584653]
rn6_v1_chr7_+_13013541_13013577	67.0863	Rfx3_Rfx1_Rfx4	ENSRNOT00000042792|Theg|ENSRNOG00000007960|theg spermatid protein [Source:RGD Symbol%3BAcc:1309240]	ENSRNOT00000010549|Theg|ENSRNOG00000007960|theg spermatid protein [Source:RGD Symbol%3BAcc:1309240]
rn6_v1_chr20_+_4369394_4369404	66.6699	Rfx3_Rfx1_Rfx4	ENSRNOT00000088734|Agpat1|ENSRNOG00000000437|1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:RGD Symbol%3BAcc:1303287]	ENSRNOT00000091491|Agpat1|ENSRNOG00000000437|1-acylglycerol-3-phosphate O-acyltransferase 1 [Source:RGD Symbol%3BAcc:1303287]
rn6_v1_chr16_-_55132191_55132191	66.664	Rfx3_Rfx1_Rfx4	ENSRNOT00000017025|Micu3|ENSRNOG00000012767|mitochondrial calcium uptake family%2C member 3 [Source:RGD Symbol%3BAcc:1563411]
rn6_v1_chr2_-_60538088_60538088	66.4063	Rfx3_Rfx1_Rfx4	ENSRNOT00000086809|Ttc23l|ENSRNOG00000055986|tetratricopeptide repeat domain 23-like [Source:MGI Symbol%3BAcc:MGI:1923027]
rn6_v1_chr10_-_57671080_57671080	65.5824	Rfx3_Rfx1_Rfx4	ENSRNOT00000082511|LOC691995|ENSRNOG00000059827|hypothetical protein LOC691995 [Source:RGD Symbol%3BAcc:1593297]
rn6_v1_chr1_-_220786615_220786615	65.2763	Rfx3_Rfx1_Rfx4	ENSRNOT00000038198|Tsga10ip|ENSRNOG00000027564|testis specific 10 interacting protein [Source:RGD Symbol%3BAcc:1302964]
rn6_v1_chr5_+_157165341_157165341	65.1842	Rfx3_Rfx1_Rfx4	ENSRNOT00000087072|Pla2g2c|ENSRNOG00000016647|phospholipase A2%2C group IIC [Source:RGD Symbol%3BAcc:3340]
rn6_v1_chr15_+_18399515_18399515	64.1931	Rfx3_Rfx1_Rfx4	ENSRNOT00000071273|Fam107a|ENSRNOG00000033261|family with sequence similarity 107%2C member A [Source:RGD Symbol%3BAcc:1306327]
rn6_v1_chr5_-_12563429_12563429	64.0487	Rfx3_Rfx1_Rfx4	ENSRNOT00000059625|St18|ENSRNOG00000006200|suppression of tumorigenicity 18 [Source:RGD Symbol%3BAcc:708566]
rn6_v1_chr2_+_211381036_211381036	63.8697	Rfx3_Rfx1_Rfx4	ENSRNOT00000055862|Wdr47|ENSRNOG00000020330|WD repeat domain 47 [Source:RGD Symbol%3BAcc:1309181]
rn6_v1_chr7_-_144837395_144837395	63.8276	Rfx3_Rfx1_Rfx4	ENSRNOT00000089024|Cbx5|ENSRNOG00000036841|chromobox 5 [Source:RGD Symbol%3BAcc:1306619]
rn6_v1_chr6_-_135259603_135259603	63.7728	Rfx3_Rfx1_Rfx4	ENSRNOT00000010529|Mok|ENSRNOG00000007850|MOK protein kinase [Source:RGD Symbol%3BAcc:1309274]
rn6_v1_chr19_-_9931930_9931930	63.7695	Rfx3_Rfx1_Rfx4	ENSRNOT00000085144|Ccdc113|ENSRNOG00000051510|coiled-coil domain containing 113 [Source:RGD Symbol%3BAcc:1565763]
rn6_v1_chr4_-_113988246_113988246	63.7255	Rfx3_Rfx1_Rfx4	ENSRNOT00000013128|LOC103692166|ENSRNOG00000009324|WD repeat-containing protein 54 [Source:RGD Symbol%3BAcc:9477816]
rn6_v1_chr1_+_266952561_266952561	63.3303	Rfx3_Rfx1_Rfx4	ENSRNOT00000076452|Neurl1|ENSRNOG00000020339|neuralized E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1307021]
rn6_v1_chr16_+_80729400_80729400	63.0435	Rfx3_Rfx1_Rfx4	ENSRNOT00000036383|Tdrp|ENSRNOG00000027245|testis development related protein [Source:RGD Symbol%3BAcc:1559733]
rn6_v1_chr3_-_7632345_7632345	62.6946	Rfx3_Rfx1_Rfx4	ENSRNOT00000049889|Cfap77|ENSRNOG00000028805|cilia and flagella associated protein 77 [Source:RGD Symbol%3BAcc:1564114]
rn6_v1_chr4_+_172709724_172709724	62.689	Rfx3_Rfx1_Rfx4	ENSRNOT00000010707|Igbp1b|ENSRNOG00000008125|immunoglobulin (CD79A) binding protein 1b [Source:RGD Symbol%3BAcc:1560971]
rn6_v1_chr3_+_148438939_148438939	61.5677	Rfx3_Rfx1_Rfx4	ENSRNOT00000064196|Ttll9|ENSRNOG00000008596|tubulin tyrosine ligase like 9 [Source:RGD Symbol%3BAcc:1359622]
rn6_v1_chr18_-_14016713_14016713	61.3622	Rfx3_Rfx1_Rfx4	ENSRNOT00000041125|Nol4|ENSRNOG00000014775|nucleolar protein 4 [Source:RGD Symbol%3BAcc:1310663]
rn6_v1_chr6_-_27024129_27024129	60.7595	Rfx3_Rfx1_Rfx4	ENSRNOT00000012273|Dpysl5|ENSRNOG00000008996|dihydropyrimidinase-like 5 [Source:RGD Symbol%3BAcc:620467]
rn6_v1_chr5_+_153845094_153845094	60.5468	Rfx3_Rfx1_Rfx4	ENSRNOT00000041600|Stpg1|ENSRNOG00000031448|sperm-tail PG-rich repeat containing 1 [Source:RGD Symbol%3BAcc:1560169]
rn6_v1_chr17_+_24242642_24242642	60.4905	Rfx3_Rfx1_Rfx4	ENSRNOT00000024323|Rnf182|ENSRNOG00000018070|ring finger protein 182 [Source:RGD Symbol%3BAcc:1560399]
rn6_v1_chr6_-_27460038_27460038	60.4849	Rfx3_Rfx1_Rfx4	ENSRNOT00000036815|Drc1|ENSRNOG00000024905|dynein regulatory complex subunit 1 [Source:RGD Symbol%3BAcc:1359318]
rn6_v1_chr6_-_8346197_8346197	60.3529	Rfx3_Rfx1_Rfx4	ENSRNOT00000061826|Prepl|ENSRNOG00000007326|prolyl endopeptidase-like [Source:RGD Symbol%3BAcc:1310143]
rn6_v1_chr3_-_80349145_80349145	59.8703	Rfx3_Rfx1_Rfx4	ENSRNOT00000040633|RGD1309540|ENSRNOG00000014798|similar to hypothetical protein MGC40841%3B similar to hypothetical protein MGC4707 [Source:RGD Symbol%3BAcc:1309540]
rn6_v1_chr9_-_92291220_92291220	59.7017	Rfx3_Rfx1_Rfx4	ENSRNOT00000093357|Dner|ENSRNOG00000016640|delta/notch-like EGF repeat containing [Source:RGD Symbol%3BAcc:1359385]
rn6_v1_chr3_-_147849875_147849875	59.6947	Rfx3_Rfx1_Rfx4	ENSRNOT00000081153|Nrsn2|ENSRNOG00000023935|neurensin 2 [Source:RGD Symbol%3BAcc:1586322]
rn6_v1_chr5_-_2982603_2982603	59.1421	Rfx3_Rfx1_Rfx4	ENSRNOT00000045460|Kcnb2|ENSRNOG00000028991|potassium voltage-gated channel subfamily B member 2 [Source:RGD Symbol%3BAcc:621349]
rn6_v1_chr4_+_85427555_85427555	58.977	Rfx3_Rfx1_Rfx4	ENSRNOT00000015469|Fam188b|ENSRNOG00000011530|family with sequence similarity 188%2C member B [Source:RGD Symbol%3BAcc:1562590]
rn6_v1_chr1_+_106998623_106998623	58.6725	Rfx3_Rfx1_Rfx4	ENSRNOT00000022383|Slc17a6|ENSRNOG00000016147|solute carrier family 17 member 6 [Source:RGD Symbol%3BAcc:620531]
rn6_v1_chr8_+_116708027_116708027	58.6055	Rfx3_Rfx1_Rfx4	ENSRNOT00000047309|Actl11|ENSRNOG00000032642|actin-like 11 [Source:RGD Symbol%3BAcc:1310036]
rn6_v1_chr9_-_94601852_94601852	58.2723	Rfx3_Rfx1_Rfx4	ENSRNOT00000022485|Ngef|ENSRNOG00000016653|neuronal guanine nucleotide exchange factor [Source:RGD Symbol%3BAcc:1309055]
rn6_v1_chr6_+_27241919_27241919	58.1536	Rfx3_Rfx1_Rfx4	ENSRNOT00000013123|Cib4|ENSRNOG00000009898|calcium and integrin binding family member 4 [Source:RGD Symbol%3BAcc:1584147]
rn6_v1_chr1_-_64433636_64433636	57.7516	Rfx3_Rfx1_Rfx4	ENSRNOT00000080032|Prkcg|ENSRNOG00000054371|protein kinase C%2C gamma [Source:RGD Symbol%3BAcc:3397]
rn6_v1_chr1_+_72874404_72874404	57.7009	Rfx3_Rfx1_Rfx4	ENSRNOT00000058900|Dnaaf3|ENSRNOG00000038600|dynein%2C axonemal%2C assembly factor 3 [Source:RGD Symbol%3BAcc:2323487]
rn6_v1_chr10_+_49472460_49472460	57.5147	Rfx3_Rfx1_Rfx4	ENSRNOT00000038276|Tekt3|ENSRNOG00000027212|tektin 3 [Source:RGD Symbol%3BAcc:1310582]
rn6_v1_chr8_-_111984572_111984572	57.0259	Rfx3_Rfx1_Rfx4	ENSRNOT00000014519|Tmem108|ENSRNOG00000010911|transmembrane protein 108 [Source:RGD Symbol%3BAcc:1311530]
rn6_v1_chr9_-_65916949_65916949	56.6251	Rfx3_Rfx1_Rfx4	ENSRNOT00000077483|Tmem237|ENSRNOG00000024085|transmembrane protein 237 [Source:RGD Symbol%3BAcc:1306705]
rn6_v1_chr10_+_89199880_89199880	56.089	Rfx3_Rfx1_Rfx4	ENSRNOT00000076865|Cntd1|ENSRNOG00000051150|cyclin N-terminal domain containing 1 [Source:RGD Symbol%3BAcc:1564542]
rn6_v1_chr1_-_89483988_89483988	55.392	Rfx3_Rfx1_Rfx4	ENSRNOT00000028603|Fxyd7|ENSRNOG00000021067|FXYD domain-containing ion transport regulator 7 [Source:RGD Symbol%3BAcc:620830]
rn6_v1_chr7_+_120891940_120891940	54.9564	Rfx3_Rfx1_Rfx4	ENSRNOT00000018787|Cby1|ENSRNOG00000013892|chibby family member 1%2C beta catenin antagonist [Source:RGD Symbol%3BAcc:708481]
rn6_v1_chr3_+_58632476_58632476	54.8068	Rfx3_Rfx1_Rfx4	ENSRNOT00000010630|Rapgef4|ENSRNOG00000001516|Rap guanine nucleotide exchange factor 4 [Source:RGD Symbol%3BAcc:621886]
rn6_v1_chr2_+_44857213_44857213	54.3545	Rfx3_Rfx1_Rfx4	ENSRNOT00000013871|Ccno|ENSRNOG00000010454|cyclin O [Source:RGD Symbol%3BAcc:1565217]
rn6_v1_chr1_+_214182830_214182830	54.2318	Rfx3_Rfx1_Rfx4	ENSRNOT00000022867|Lrrc56|ENSRNOG00000016697|leucine rich repeat containing 56 [Source:RGD Symbol%3BAcc:1311654]
rn6_v1_chr18_-_40123420_40123420	54.0974	Rfx3_Rfx1_Rfx4	ENSRNOT00000080812|Trim36|ENSRNOG00000016612|tripartite motif-containing 36 [Source:RGD Symbol%3BAcc:1308714]
rn6_v1_chr5_+_157165888_157165888	54.0037	Rfx3_Rfx1_Rfx4	ENSRNOT00000043029|Pla2g2c|ENSRNOG00000016647|phospholipase A2%2C group IIC [Source:RGD Symbol%3BAcc:3340]
rn6_v1_chr10_+_49020454_49020512	53.9567	Rfx3_Rfx1_Rfx4	ENSRNOT00000003402|LOC108348055|ENSRNOG00000002462|B9 domain-containing protein 1 [Source:RGD Symbol%3BAcc:11475921]	ENSRNOT00000067379|LOC108348055|ENSRNOG00000002462|B9 domain-containing protein 1 [Source:RGD Symbol%3BAcc:11475921]
rn6_v1_chr1_+_15642153_15642153	53.9329	Rfx3_Rfx1_Rfx4	ENSRNOT00000079845|Map7|ENSRNOG00000012701|microtubule-associated protein 7 [Source:RGD Symbol%3BAcc:1308866]
rn6_v1_chr9_-_65917132_65917132	53.7111	Rfx3_Rfx1_Rfx4	ENSRNOT00000031866|Tmem237|ENSRNOG00000024085|transmembrane protein 237 [Source:RGD Symbol%3BAcc:1306705]
rn6_v1_chr15_+_18399733_18399733	53.699	Rfx3_Rfx1_Rfx4	ENSRNOT00000061158|Fam107a|ENSRNOG00000033261|family with sequence similarity 107%2C member A [Source:RGD Symbol%3BAcc:1306327]
rn6_v1_chr13_-_90641772_90641772	53.6499	Rfx3_Rfx1_Rfx4	ENSRNOT00000064601|Atp1a4|ENSRNOG00000032378|ATPase Na+/K+ transporting subunit alpha 4 [Source:RGD Symbol%3BAcc:61952]
rn6_v1_chr7_-_11513581_11513581	53.4508	Rfx3_Rfx1_Rfx4	ENSRNOT00000027045|Thop1|ENSRNOG00000019924|thimet oligopeptidase 1 [Source:RGD Symbol%3BAcc:68330]
rn6_v1_chr1_+_211544157_211544157	53.2262	Rfx3_Rfx1_Rfx4	ENSRNOT00000023610|Lrrc27|ENSRNOG00000017538|leucine rich repeat containing 27 [Source:RGD Symbol%3BAcc:1559981]
rn6_v1_chr1_+_221424383_221424383	53.094	Rfx3_Rfx1_Rfx4	ENSRNOT00000028482|Znhit2|ENSRNOG00000021794|zinc finger%2C HIT-type containing 2 [Source:RGD Symbol%3BAcc:1307918]
rn6_v1_chrX_+_135470915_135470915	52.7876	Rfx3_Rfx1_Rfx4	ENSRNOT00000009637|Slc25a14|ENSRNOG00000006871|solute carrier family 25 member 14 [Source:RGD Symbol%3BAcc:621433]
rn6_v1_chr3_-_153876938_153876938	52.5097	Rfx3_Rfx1_Rfx4	ENSRNOT00000087907|LOC100911769|ENSRNOG00000055809|band 4.1-like protein 1-like [Source:RGD Symbol%3BAcc:6490915]
rn6_v1_chr3_+_8349185_8349185	52.4761	Rfx3_Rfx1_Rfx4	ENSRNOT00000038602|Coq4|ENSRNOG00000026691|coenzyme Q4 [Source:RGD Symbol%3BAcc:1304638]
rn6_v1_chr4_+_57823411_57823412	52.1203	Rfx3_Rfx1_Rfx4	ENSRNOT00000030462|Ssmem1|ENSRNOG00000010345|serine-rich single-pass membrane protein 1 [Source:RGD Symbol%3BAcc:1559502]	ENSRNOT00000088235|Ssmem1|ENSRNOG00000010345|serine-rich single-pass membrane protein 1 [Source:RGD Symbol%3BAcc:1559502]
rn6_v1_chrX_+_32495809_32495809	52.0142	Rfx3_Rfx1_Rfx4	ENSRNOT00000020999|RGD1565844|ENSRNOG00000004120|similar to RIKEN cDNA 1700045I19 [Source:RGD Symbol%3BAcc:1565844]
rn6_v1_chr8_+_79638696_79638696	51.7092	Rfx3_Rfx1_Rfx4	ENSRNOT00000085959|Dyx1c1|ENSRNOG00000056654|dyslexia susceptibility 1 candidate 1 [Source:RGD Symbol%3BAcc:1549760]
rn6_v1_chr5_-_25750826_25750826	51.6462	Rfx3_Rfx1_Rfx4	ENSRNOT00000022249|Fam92a|ENSRNOG00000016338|family with sequence similarity 92 member A [Source:RGD Symbol%3BAcc:1310681]
rn6_v1_chr17_-_86322144_86322144	51.5409	Rfx3_Rfx1_Rfx4	ENSRNOT00000034474|LOC681241|ENSRNOG00000021898|hypothetical protein LOC681241 [Source:RGD Symbol%3BAcc:1598031]
rn6_v1_chr11_-_61748768_61748768	51.4525	Rfx3_Rfx1_Rfx4	ENSRNOT00000078879|Ccdc191|ENSRNOG00000057815|coiled-coil domain containing 191 [Source:RGD Symbol%3BAcc:1566314]
rn6_v1_chr2_+_207930796_207930796	51.4335	Rfx3_Rfx1_Rfx4	ENSRNOT00000047827|Kcnd3|ENSRNOG00000014686|potassium voltage-gated channel subfamily D member 3 [Source:RGD Symbol%3BAcc:68394]
rn6_v1_chr3_+_8450612_8450612	50.8505	Rfx3_Rfx1_Rfx4	ENSRNOT00000040457|Odf2|ENSRNOG00000014584|outer dense fiber of sperm tails 2 [Source:RGD Symbol%3BAcc:3229]
rn6_v1_chr10_+_11877903_11877979	50.8434	Rfx3_Rfx1_Rfx4	ENSRNOT00000076532|RGD1561796|ENSRNOG00000007268|RGD1561796 [Source:RGD Symbol%3BAcc:1561796]	ENSRNOT00000075890|RGD1561796|ENSRNOG00000007268|RGD1561796 [Source:RGD Symbol%3BAcc:1561796]
rn6_v1_chr20_+_21316826_21316826	50.7872	Rfx3_Rfx1_Rfx4	ENSRNOT00000000785|RGD1306739|ENSRNOG00000000634|similar to RIKEN cDNA 1700040L02 [Source:RGD Symbol%3BAcc:1306739]
rn6_v1_chr7_+_120465130_120465130	50.4601	Rfx3_Rfx1_Rfx4	ENSRNOT00000016077|Pick1|ENSRNOG00000011507|protein interacting with PRKCA 1 [Source:RGD Symbol%3BAcc:69437]
rn6_v1_chr2_-_52492509_52492509	50.2353	Rfx3_Rfx1_Rfx4	ENSRNOT00000021964|Nim1k|ENSRNOG00000016353|NIM1 serine/threonine protein kinase [Source:RGD Symbol%3BAcc:1308116]
rn6_v1_chr1_+_80087684_80087684	50.0903	Rfx3_Rfx1_Rfx4	ENSRNOT00000041215|Eml2|ENSRNOG00000030127|echinoderm microtubule associated protein like 2 [Source:RGD Symbol%3BAcc:621066]
rn6_v1_chr8_+_107699480_107699480	49.7862	Rfx3_Rfx1_Rfx4	ENSRNOT00000048864|Nme9|ENSRNOG00000031523|NME/NM23 family member 9 [Source:MGI Symbol%3BAcc:MGI:4359686]
rn6_v1_chr11_-_53731779_53731779	49.3116	Rfx3_Rfx1_Rfx4	ENSRNOT00000002684|Ift57|ENSRNOG00000001958|intraflagellar transport 57 [Source:RGD Symbol%3BAcc:1305947]
rn6_v1_chr8_+_64364741_64364741	49.1399	Rfx3_Rfx1_Rfx4	ENSRNOT00000082840|Celf6|ENSRNOG00000052224|CUGBP%2C Elav-like family member 6 [Source:RGD Symbol%3BAcc:1310451]
rn6_v1_chr14_-_84150607_84150607	48.7923	Rfx3_Rfx1_Rfx4	ENSRNOT00000005514|RGD1308775|ENSRNOG00000004112|similar to RIKEN cDNA 4921536K21 [Source:RGD Symbol%3BAcc:1308775]
rn6_v1_chr7_+_12652415_12652415	48.5034	Rfx3_Rfx1_Rfx4	ENSRNOT00000031315|Plppr3|ENSRNOG00000027940|phospholipid phosphatase related 3 [Source:RGD Symbol%3BAcc:727823]
rn6_v1_chr3_-_123718432_123718432	48.4896	Rfx3_Rfx1_Rfx4	ENSRNOT00000028861|Spef1|ENSRNOG00000021247|sperm flagellar 1 [Source:RGD Symbol%3BAcc:1311267]
rn6_v1_chr18_+_28781349_28781349	48.3256	Rfx3_Rfx1_Rfx4	ENSRNOT00000026112|Psd2|ENSRNOG00000019177|pleckstrin and Sec7 domain containing 2 [Source:RGD Symbol%3BAcc:1311075]
rn6_v1_chr10_+_47785033_47785078	48.2592	Rfx3_Rfx1_Rfx4	ENSRNOT00000075073|B9d1|ENSRNOG00000047790|B9 domain containing 1 [Source:RGD Symbol%3BAcc:1305522]	ENSRNOT00000084944|B9d1|ENSRNOG00000047790|B9 domain containing 1 [Source:RGD Symbol%3BAcc:1305522]
rn6_v1_chr6_-_67084234_67084234	48.2565	Rfx3_Rfx1_Rfx4	ENSRNOT00000050372|Nova1|ENSRNOG00000031440|NOVA alternative splicing regulator 1 [Source:RGD Symbol%3BAcc:621345]
rn6_v1_chr1_+_190681094_190681094	48.1909	Rfx3_Rfx1_Rfx4	ENSRNOT00000036175|Vwa3a|ENSRNOG00000025110|von Willebrand factor A domain containing 3A [Source:RGD Symbol%3BAcc:1311670]
rn6_v1_chr8_-_64154396_64154396	48.1326	Rfx3_Rfx1_Rfx4	ENSRNOT00000031262|Bbs4|ENSRNOG00000026171|Bardet-Biedl syndrome 4 [Source:RGD Symbol%3BAcc:1309134]
rn6_v1_chr7_-_11513415_11513415	48.1307	Rfx3_Rfx1_Rfx4	ENSRNOT00000082486|Thop1|ENSRNOG00000019924|thimet oligopeptidase 1 [Source:RGD Symbol%3BAcc:68330]
rn6_v1_chr3_-_110021149_110021149	48.1192	Rfx3_Rfx1_Rfx4	ENSRNOT00000007808|Fsip1|ENSRNOG00000005888|fibrous sheath interacting protein 1 [Source:RGD Symbol%3BAcc:1306874]
rn6_v1_chr1_-_88162583_88162583	47.3338	Rfx3_Rfx1_Rfx4	ENSRNOT00000087411|Catsperg|ENSRNOG00000060693|cation channel sperm associated auxiliary subunit gamma [Source:RGD Symbol%3BAcc:1310942]
rn6_v1_chr3_+_8450275_8450275	47.2976	Rfx3_Rfx1_Rfx4	ENSRNOT00000020073|Odf2|ENSRNOG00000014584|outer dense fiber of sperm tails 2 [Source:RGD Symbol%3BAcc:3229]
rn6_v1_chr16_+_49485256_49485256	47.1684	Rfx3_Rfx1_Rfx4	ENSRNOT00000059317|RGD1564308|ENSRNOG00000038819|similar to LOC495042 protein [Source:RGD Symbol%3BAcc:1564308]
rn6_v1_chr3_+_111767161_111767161	47.0382	Rfx3_Rfx1_Rfx4	ENSRNOT00000009430|Mapkbp1|ENSRNOG00000007018|mitogen activated protein kinase binding protein 1 [Source:RGD Symbol%3BAcc:1307578]
rn6_v1_chr16_+_69022792_69022792	46.9642	Rfx3_Rfx1_Rfx4	ENSRNOT00000035985|Got1l1|ENSRNOG00000038473|glutamic-oxaloacetic transaminase 1-like 1 [Source:RGD Symbol%3BAcc:1307172]
rn6_v1_chr5_-_57683932_57683932	46.8972	Rfx3_Rfx1_Rfx4	ENSRNOT00000074796|Dcaf12|ENSRNOG00000050790|DDB1 and CUL4 associated factor 12 [Source:MGI Symbol%3BAcc:MGI:1916220]
rn6_v1_chr20_+_46215379_46215379	46.7287	Rfx3_Rfx1_Rfx4	ENSRNOT00000066634|Ppil6|ENSRNOG00000043186|peptidylprolyl isomerase like 6 [Source:RGD Symbol%3BAcc:1592581]	ENSRNOT00000068693|Ppil6|ENSRNOG00000043186|peptidylprolyl isomerase like 6 [Source:RGD Symbol%3BAcc:1592581]
rn6_v1_chr14_-_33430956_33430956	46.7048	Rfx3_Rfx1_Rfx4	ENSRNOT00000002860|Thegl|ENSRNOG00000002085|theg spermatid protein-like [Source:RGD Symbol%3BAcc:1562571]
rn6_v1_chr1_-_281101438_281101438	46.6824	Rfx3_Rfx1_Rfx4	ENSRNOT00000012734|Rab11fip2|ENSRNOG00000009523|RAB11 family interacting protein 2 [Source:RGD Symbol%3BAcc:1308538]
rn6_v1_chr8_-_50608363_50608363	46.2801	Rfx3_Rfx1_Rfx4	ENSRNOT00000059386|LOC500990|ENSRNOG00000038867|similar to RIKEN cDNA 4931429L15 [Source:RGD Symbol%3BAcc:1561633]
rn6_v1_chr6_+_8346704_8346704	45.9724	Rfx3_Rfx1_Rfx4	ENSRNOT00000092218|AC111831.2|ENSRNOG00000060905|
rn6_v1_chr11_+_70967439_70967439	45.7997	Rfx3_Rfx1_Rfx4	ENSRNOT00000032518|Iqcg|ENSRNOG00000026420|IQ motif containing G [Source:RGD Symbol%3BAcc:1311606]
rn6_v1_chr9_+_92435896_92435896	45.7582	Rfx3_Rfx1_Rfx4	ENSRNOT00000022901|Fbxo36|ENSRNOG00000017053|F-box protein 36 [Source:RGD Symbol%3BAcc:1307870]
rn6_v1_chr9_+_93172673_93172673	45.415	Rfx3_Rfx1_Rfx4	ENSRNOT00000088525|Armc9|ENSRNOG00000025418|armadillo repeat containing 9 [Source:RGD Symbol%3BAcc:1305615]
rn6_v1_chr19_+_56136904_56136904	45.3648	Rfx3_Rfx1_Rfx4	ENSRNOT00000022823|Spire2|ENSRNOG00000016920|spire-type actin nucleation factor 2 [Source:RGD Symbol%3BAcc:1305837]
rn6_v1_chr13_+_50103189_50103189	45.3349	Rfx3_Rfx1_Rfx4	ENSRNOT00000004078|Atp2b4|ENSRNOG00000003031|ATPase plasma membrane Ca2+ transporting 4 [Source:RGD Symbol%3BAcc:621305]
rn6_v1_chr2_+_181331464_181331464	45.1928	Rfx3_Rfx1_Rfx4	ENSRNOT00000017448|Map9|ENSRNOG00000012982|microtubule-associated protein 9 [Source:RGD Symbol%3BAcc:1560368]
rn6_v1_chr1_-_261333383_261333383	44.5811	Rfx3_Rfx1_Rfx4	ENSRNOT00000037490|Morn4|ENSRNOG00000027156|MORN repeat containing 4 [Source:RGD Symbol%3BAcc:1307336]
rn6_v1_chrX_-_23469041_23469041	44.533	Rfx3_Rfx1_Rfx4	ENSRNOT00000065789|LOC685699|ENSRNOG00000043358|hypothetical protein LOC685699 [Source:RGD Symbol%3BAcc:1591314]
rn6_v1_chr15_-_60766579_60766579	43.97	Rfx3_Rfx1_Rfx4	ENSRNOT00000079978|Akap11|ENSRNOG00000009987|A-kinase anchoring protein 11 [Source:RGD Symbol%3BAcc:2079]
rn6_v1_chr14_+_84150908_84150908	42.7805	Rfx3_Rfx1_Rfx4	ENSRNOT00000005516|Dusp18|ENSRNOG00000024945|dual specificity phosphatase 18 [Source:RGD Symbol%3BAcc:1306929]
rn6_v1_chr2_+_116372519_116372519	42.7467	Rfx3_Rfx1_Rfx4	ENSRNOT00000031730|Lrrc34|ENSRNOG00000027935|leucine rich repeat containing 34 [Source:RGD Symbol%3BAcc:1565052]
rn6_v1_chr19_-_41567013_41567013	42.3245	Rfx3_Rfx1_Rfx4	ENSRNOT00000022757|Zfp612|ENSRNOG00000016971|zinc finger protein 612 [Source:RGD Symbol%3BAcc:1307197]
rn6_v1_chr15_+_33755478_33755478	42.2834	Rfx3_Rfx1_Rfx4	ENSRNOT00000034073|Thtpa|ENSRNOG00000018105|thiamine triphosphatase [Source:RGD Symbol%3BAcc:727917]
rn6_v1_chr7_-_120295618_120295618	42.1061	Rfx3_Rfx1_Rfx4	ENSRNOT00000014413|Ankrd54|ENSRNOG00000010821|ankyrin repeat domain 54 [Source:RGD Symbol%3BAcc:1309552]
rn6_v1_chr10_-_52710862_52710862	41.9002	Rfx3_Rfx1_Rfx4	ENSRNOT00000005583|Dnah9|ENSRNOG00000004171|dynein%2C axonemal%2C heavy chain 9 [Source:RGD Symbol%3BAcc:621799]
rn6_v1_chr11_-_61748583_61748583	41.7999	Rfx3_Rfx1_Rfx4	ENSRNOT00000093431|Ccdc191|ENSRNOG00000057815|coiled-coil domain containing 191 [Source:RGD Symbol%3BAcc:1566314]
rn6_v1_chr17_-_8619737_8619737	41.5235	Rfx3_Rfx1_Rfx4	ENSRNOT00000065217|RGD1562024|ENSRNOG00000042749|RGD1562024 [Source:RGD Symbol%3BAcc:1562024]
rn6_v1_chr7_+_117734002_117734002	41.4423	Rfx3_Rfx1_Rfx4	ENSRNOT00000020768|Ppp1r16a|ENSRNOG00000015450|protein phosphatase 1%2C regulatory subunit 16A [Source:RGD Symbol%3BAcc:1307962]
rn6_v1_chr1_+_142034423_142034423	41.4204	Rfx3_Rfx1_Rfx4	ENSRNOT00000090006|Ttll13|ENSRNOG00000056362|tubulin tyrosine ligase-like family%2C member 13 [Source:RGD Symbol%3BAcc:1310399]
rn6_v1_chr6_+_43743702_43743702	41.3484	Rfx3_Rfx1_Rfx4	ENSRNOT00000082570|Grhl1|ENSRNOG00000054989|grainyhead-like transcription factor 1 [Source:RGD Symbol%3BAcc:1305735]
rn6_v1_chr1_-_144601327_144601335	41.3159	Rfx3_Rfx1_Rfx4	ENSRNOT00000029244|Saxo2|ENSRNOG00000026296|stabilizer of axonemal microtubules 2 [Source:RGD Symbol%3BAcc:1562653]	ENSRNOT00000078144|Saxo2|ENSRNOG00000026296|stabilizer of axonemal microtubules 2 [Source:RGD Symbol%3BAcc:1562653]
rn6_v1_chr2_-_165600748_165600748	41.0922	Rfx3_Rfx1_Rfx4	ENSRNOT00000013216|Ift80|ENSRNOG00000009808|intraflagellar transport 80 [Source:RGD Symbol%3BAcc:1312006]
rn6_v1_chr7_-_72328128_72328128	41.0473	Rfx3_Rfx1_Rfx4	ENSRNOT00000008227|Tspyl5|ENSRNOG00000006278|TSPY-like 5 [Source:RGD Symbol%3BAcc:1311262]
rn6_v1_chr4_+_61420009_61420010	40.8354	Rfx3_Rfx1_Rfx4	ENSRNOT00000082175|Lrguk|ENSRNOG00000008775|leucine-rich repeats and guanylate kinase domain containing [Source:RGD Symbol%3BAcc:1308226]	ENSRNOT00000011692|Lrguk|ENSRNOG00000008775|leucine-rich repeats and guanylate kinase domain containing [Source:RGD Symbol%3BAcc:1308226]
rn6_v1_chr5_+_23358841_23358841	40.6212	Rfx3_Rfx1_Rfx4	ENSRNOT00000070963|MGC94199|ENSRNOG00000049287|similar to RIKEN cDNA 2610301B20%3B EST AI428449 [Source:RGD Symbol%3BAcc:1549749]
rn6_v1_chr20_+_4959294_4959294	39.3321	Rfx3_Rfx1_Rfx4	ENSRNOT00000074223|Hspa1l|ENSRNOG00000047966|heat shock protein family A (Hsp70) member 1 like [Source:RGD Symbol%3BAcc:1595925]
rn6_v1_chr16_-_7408265_7408265	39.2923	Rfx3_Rfx1_Rfx4	ENSRNOT00000035009|Dnah1|ENSRNOG00000026914|dynein%2C axonemal%2C heavy chain 1 [Source:RGD Symbol%3BAcc:621795]
rn6_v1_chrX_-_22440187_22440187	38.7774	Rfx3_Rfx1_Rfx4	ENSRNOT00000090731|Gpr173|ENSRNOG00000060137|
rn6_v1_chr10_+_58784660_58784660	38.7374	Rfx3_Rfx1_Rfx4	ENSRNOT00000019925|LOC100912483|ENSRNOG00000014865|uncharacterized LOC100912483 [Source:RGD Symbol%3BAcc:6486589]
rn6_v1_chr20_-_46871946_46871946	38.2676	Rfx3_Rfx1_Rfx4	ENSRNOT00000031047|Armc2|ENSRNOG00000026217|armadillo repeat containing 2 [Source:RGD Symbol%3BAcc:1562413]
rn6_v1_chr3_-_123702732_123702732	38.1048	Rfx3_Rfx1_Rfx4	ENSRNOT00000028859|RGD1311739|ENSRNOG00000021245|similar to RIKEN cDNA 1700037H04 [Source:RGD Symbol%3BAcc:1311739]
rn6_v1_chr8_-_79660439_79660439	37.8993	Rfx3_Rfx1_Rfx4	ENSRNOT00000089949|Ccpg1os|ENSRNOG00000052869|cell cycle progression 1%2C opposite strand [Source:RGD Symbol%3BAcc:1594626]
rn6_v1_chr9_+_82718709_82718753	37.7687	Rfx3_Rfx1_Rfx4	ENSRNOT00000027256|Stk11ip|ENSRNOG00000020107|serine/threonine kinase 11 interacting protein [Source:RGD Symbol%3BAcc:1305046]	ENSRNOT00000080524|Stk11ip|ENSRNOG00000020107|serine/threonine kinase 11 interacting protein [Source:RGD Symbol%3BAcc:1305046]
rn6_v1_chr10_+_70520206_70520279	37.5961	Rfx3_Rfx1_Rfx4	ENSRNOT00000088198|Ap2b1|ENSRNOG00000061543|adaptor-related protein complex 2%2C beta 1 subunit [Source:RGD Symbol%3BAcc:71048]	ENSRNOT00000090446|Ap2b1|ENSRNOG00000061543|adaptor-related protein complex 2%2C beta 1 subunit [Source:RGD Symbol%3BAcc:71048]	ENSRNOT00000085799|Ap2b1|ENSRNOG00000061543|adaptor-related protein complex 2%2C beta 1 subunit [Source:RGD Symbol%3BAcc:71048]
rn6_v1_chr3_+_160047296_160047296	37.3956	Rfx3_Rfx1_Rfx4	ENSRNOT00000051590|Pkig|ENSRNOG00000010235|cAMP-dependent protein kinase inhibitor gamma [Source:RGD Symbol%3BAcc:628775]
rn6_v1_chr5_+_24146171_24146171	37.1512	Rfx3_Rfx1_Rfx4	ENSRNOT00000037547|MGC94199|ENSRNOG00000026672|similar to RIKEN cDNA 2610301B20%3B EST AI428449 [Source:RGD Symbol%3BAcc:1549749]
rn6_v1_chr4_+_151250041_151250041	37.1156	Rfx3_Rfx1_Rfx4	ENSRNOT00000009832|Dcp1b|ENSRNOG00000007340|decapping mRNA 1B [Source:RGD Symbol%3BAcc:1562214]
rn6_v1_chr3_-_111994337_111994337	37.0659	Rfx3_Rfx1_Rfx4	ENSRNOT00000030502|Pla2g4e|ENSRNOG00000024904|phospholipase A2%2C group IVE [Source:RGD Symbol%3BAcc:1310595]
rn6_v1_chr3_+_147894558_147894558	36.8688	Rfx3_Rfx1_Rfx4	ENSRNOT00000055415|LOC502684|ENSRNOG00000023721|hypothetical protein LOC502684 [Source:RGD Symbol%3BAcc:1559448]
rn6_v1_chr5_-_171327450_171327450	36.5893	Rfx3_Rfx1_Rfx4	ENSRNOT00000088710|Ccdc27|ENSRNOG00000056358|coiled-coil domain containing 27 [Source:RGD Symbol%3BAcc:1587099]
rn6_v1_chr2_+_206454208_206454208	36.3316	Rfx3_Rfx1_Rfx4	ENSRNOT00000026863|Phtf1|ENSRNOG00000019785|putative homeodomain transcription factor 1 [Source:RGD Symbol%3BAcc:620426]
rn6_v1_chr4_-_179700130_179700130	36.1491	Rfx3_Rfx1_Rfx4	ENSRNOT00000021306|Lmntd1|ENSRNOG00000015910|lamin tail domain containing 1 [Source:RGD Symbol%3BAcc:1560077]
rn6_v1_chr4_-_181348799_181348799	35.6211	Rfx3_Rfx1_Rfx4	ENSRNOT00000033743|LOC690784|ENSRNOG00000026864|hypothetical protein LOC690783 [Source:RGD Symbol%3BAcc:1592184]
rn6_v1_chr3_+_129018592_129018592	35.3539	Rfx3_Rfx1_Rfx4	ENSRNOT00000007274|Lamp5|ENSRNOG00000005457|lysosomal-associated membrane protein family%2C member 5 [Source:RGD Symbol%3BAcc:1306991]
rn6_v1_chr6_+_86713604_86713604	35.1588	Rfx3_Rfx1_Rfx4	ENSRNOT00000059271|Fam179b|ENSRNOG00000004415|family with sequence similarity 179%2C member B [Source:RGD Symbol%3BAcc:1310474]
rn6_v1_chr7_+_77066955_77066955	34.7923	Rfx3_Rfx1_Rfx4	ENSRNOT00000008700|Odf1|ENSRNOG00000006578|outer dense fiber of sperm tails 1 [Source:RGD Symbol%3BAcc:3228]
rn6_v1_chr6_-_43493816_43493816	34.5177	Rfx3_Rfx1_Rfx4	ENSRNOT00000077786|Ywhaq|ENSRNOG00000051650|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein%2C theta [Source:RGD Symbol%3BAcc:3979]
rn6_v1_chr13_+_96303703_96303825	34.3913	Rfx3_Rfx1_Rfx4	ENSRNOT00000084718|Efcab2|ENSRNOG00000042201|EF-hand calcium binding domain 2 [Source:RGD Symbol%3BAcc:1308593]	ENSRNOT00000029723|Efcab2|ENSRNOG00000042201|EF-hand calcium binding domain 2 [Source:RGD Symbol%3BAcc:1308593]
rn6_v1_chrX_-_157848842_157848842	34.3871	Rfx3_Rfx1_Rfx4	ENSRNOT00000035398|Fam122c|ENSRNOG00000028011|family with sequence similarity 122C [Source:RGD Symbol%3BAcc:1590266]
rn6_v1_chr6_+_86713803_86713803	34.0998	Rfx3_Rfx1_Rfx4	ENSRNOT00000005861|Fam179b|ENSRNOG00000004415|family with sequence similarity 179%2C member B [Source:RGD Symbol%3BAcc:1310474]
rn6_v1_chrX_+_133227660_133227660	33.9147	Rfx3_Rfx1_Rfx4	ENSRNOT00000004591|Actrt1|ENSRNOG00000003456|actin-related protein T1 [Source:RGD Symbol%3BAcc:1359559]
rn6_v1_chr3_+_172692452_172692452	33.873	Rfx3_Rfx1_Rfx4	ENSRNOT00000077193|Zfp831|ENSRNOG00000024693|zinc finger protein 831 [Source:RGD Symbol%3BAcc:1565819]
rn6_v1_chr7_+_116739062_116739156	33.765	Rfx3_Rfx1_Rfx4	ENSRNOT00000075837|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]	ENSRNOT00000076670|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]	ENSRNOT00000010065|Rhpn1|ENSRNOG00000007597|rhophilin%2C Rho GTPase binding protein 1 [Source:RGD Symbol%3BAcc:1305688]
rn6_v1_chr5_+_152333043_152333043	33.4057	Rfx3_Rfx1_Rfx4	ENSRNOT00000021342|Ubxn11|ENSRNOG00000015476|UBX domain protein 11 [Source:RGD Symbol%3BAcc:620769]
rn6_v1_chr10_-_10808585_10808585	33.2351	Rfx3_Rfx1_Rfx4	ENSRNOT00000036954|LOC360479|ENSRNOG00000028075|similar to hypothetical protein [Source:RGD Symbol%3BAcc:1359596]
rn6_v1_chr9_+_47724_47724	33.0823	Rfx3_Rfx1_Rfx4	ENSRNOT00000016911|Efhb|ENSRNOG00000012618|EF hand domain family%2C member B [Source:RGD Symbol%3BAcc:1566407]
rn6_v1_chr1_+_37507276_37507276	33.064	Rfx3_Rfx1_Rfx4	ENSRNOT00000047627|Adcy2|ENSRNOG00000032150|adenylate cyclase 2 [Source:RGD Symbol%3BAcc:619965]
rn6_v1_chr1_-_188373571_188373571	32.9524	Rfx3_Rfx1_Rfx4	ENSRNOT00000075020|Knop1|ENSRNOG00000048270|lysine-rich nucleolar protein 1 [Source:RGD Symbol%3BAcc:1565096]
rn6_v1_chr1_+_72874583_72874583	32.9209	Rfx3_Rfx1_Rfx4	ENSRNOT00000077719|Dnaaf3|ENSRNOG00000038600|dynein%2C axonemal%2C assembly factor 3 [Source:RGD Symbol%3BAcc:2323487]
rn6_v1_chr2_+_164549455_164549455	32.8586	Rfx3_Rfx1_Rfx4	ENSRNOT00000017151|Mlf1|ENSRNOG00000012827|myeloid leukemia factor 1 [Source:RGD Symbol%3BAcc:1306854]
rn6_v1_chr6_-_110669910_110669910	32.7935	Rfx3_Rfx1_Rfx4	ENSRNOT00000014635|Angel1|ENSRNOG00000010567|angel homolog 1 [Source:RGD Symbol%3BAcc:1306238]
rn6_v1_chr10_+_89339029_89339029	32.6899	Rfx3_Rfx1_Rfx4	ENSRNOT00000031208|Rundc1|ENSRNOG00000023768|RUN domain containing 1 [Source:RGD Symbol%3BAcc:1307490]
rn6_v1_chr7_-_30397930_30397930	32.6466	Rfx3_Rfx1_Rfx4	ENSRNOT00000010414|Actr6|ENSRNOG00000007875|ARP6 actin-related protein 6 homolog [Source:RGD Symbol%3BAcc:1304609]
rn6_v1_chr10_+_86763117_86763117	32.5895	Rfx3_Rfx1_Rfx4	ENSRNOT00000030425|Rapgefl1|ENSRNOG00000027871|Rap guanine nucleotide exchange factor like 1 [Source:RGD Symbol%3BAcc:1563269]
rn6_v1_chr19_+_17115412_17115412	32.3466	Rfx3_Rfx1_Rfx4	ENSRNOT00000015876|Rpgrip1l|ENSRNOG00000011829|Rpgrip1-like [Source:RGD Symbol%3BAcc:1311099]
rn6_v1_chr3_-_7278758_7278758	32.199	Rfx3_Rfx1_Rfx4	ENSRNOT00000017004|Spaca9|ENSRNOG00000012697|sperm acrosome associated 9 [Source:RGD Symbol%3BAcc:727909]
rn6_v1_chr2_+_261402980_261402980	32.1181	Rfx3_Rfx1_Rfx4	ENSRNOT00000012841|Lrriq3|ENSRNOG00000009555|leucine-rich repeats and IQ motif containing 3 [Source:RGD Symbol%3BAcc:1591943]
rn6_v1_chr10_-_76813386_76813386	32.1051	Rfx3_Rfx1_Rfx4	ENSRNOT00000032388|Nog|ENSRNOG00000023683|noggin [Source:RGD Symbol%3BAcc:3183]
rn6_v1_chr2_+_127459012_127459089	32.0393	Rfx3_Rfx1_Rfx4	ENSRNOT00000093685|Intu|ENSRNOG00000010556|inturned planar cell polarity protein [Source:RGD Symbol%3BAcc:1309446]	ENSRNOT00000072675|Intu|ENSRNOG00000010556|inturned planar cell polarity protein [Source:RGD Symbol%3BAcc:1309446]
rn6_v1_chr6_+_128973956_128973956	31.8505	Rfx3_Rfx1_Rfx4	ENSRNOT00000075399|Fam181a|ENSRNOG00000048412|family with sequence similarity 181%2C member A [Source:RGD Symbol%3BAcc:6504274]
rn6_v1_chr3_-_62761325_62761325	31.4779	Rfx3_Rfx1_Rfx4	ENSRNOT00000050515|Ttc30b|ENSRNOG00000059460|tetratricopeptide repeat domain 30B [Source:RGD Symbol%3BAcc:1590784]
rn6_v1_chr18_+_59096643_59096643	31.3983	Rfx3_Rfx1_Rfx4	ENSRNOT00000025325|Wdr7|ENSRNOG00000018387|WD repeat domain 7 [Source:RGD Symbol%3BAcc:619836]
rn6_v1_chr3_-_165477771_165477771	31.3063	Rfx3_Rfx1_Rfx4	ENSRNOT00000071672|Atp9a|ENSRNOG00000049484|ATPase phospholipid transporting 9A (putative) [Source:RGD Symbol%3BAcc:621421]
rn6_v1_chr4_+_161696903_161696903	31.2079	Rfx3_Rfx1_Rfx4	ENSRNOT00000055889|LOC100362909|ENSRNOG00000028279|rCG30099-like [Source:RGD Symbol%3BAcc:2323784]
rn6_v1_chr12_-_41671437_41671437	30.9527	Rfx3_Rfx1_Rfx4	ENSRNOT00000001883|Lhx5|ENSRNOG00000001392|LIM homeobox 5 [Source:RGD Symbol%3BAcc:71079]
rn6_v1_chr2_+_4252496_4252496	30.8764	Rfx3_Rfx1_Rfx4	ENSRNOT00000071535|RGD1560883|ENSRNOG00000045639|similar to KIAA0825 protein [Source:RGD Symbol%3BAcc:1560883]
rn6_v1_chrX_+_122938009_122938035	30.5421	Rfx3_Rfx1_Rfx4	ENSRNOT00000089266|Lonrf3|ENSRNOG00000013092|LON peptidase N-terminal domain and ring finger 3 [Source:RGD Symbol%3BAcc:1565451]	ENSRNOT00000017550|Lonrf3|ENSRNOG00000013092|LON peptidase N-terminal domain and ring finger 3 [Source:RGD Symbol%3BAcc:1565451]
rn6_v1_chr5_-_126221916_126221916	30.5418	Rfx3_Rfx1_Rfx4	ENSRNOT00000052130|Lexm|ENSRNOG00000030914|lymphocyte expansion molecule [Source:RGD Symbol%3BAcc:1559493]
rn6_v1_chr3_+_152571121_152571121	30.431	Rfx3_Rfx1_Rfx4	ENSRNOT00000087289|Epb41l1|ENSRNOG00000057817|erythrocyte membrane protein band 4.1-like 1 [Source:RGD Symbol%3BAcc:71087]	ENSRNOT00000080543|Epb41l1|ENSRNOG00000057817|erythrocyte membrane protein band 4.1-like 1 [Source:RGD Symbol%3BAcc:71087]	ENSRNOT00000083476|Epb41l1|ENSRNOG00000057817|erythrocyte membrane protein band 4.1-like 1 [Source:RGD Symbol%3BAcc:71087]
rn6_v1_chr6_+_108123816_108123855	30.3746	Rfx3_Rfx1_Rfx4	ENSRNOT00000089242|Bbof1|ENSRNOG00000011376|basal body orientation factor 1 [Source:RGD Symbol%3BAcc:1560978]	ENSRNOT00000063900|Bbof1|ENSRNOG00000011376|basal body orientation factor 1 [Source:RGD Symbol%3BAcc:1560978]
rn6_v1_chr4_-_159467955_159467955	30.3598	Rfx3_Rfx1_Rfx4	ENSRNOT00000083056|Dyrk4|ENSRNOG00000053178|dual specificity tyrosine phosphorylation regulated kinase 4 [Source:RGD Symbol%3BAcc:1306800]
rn6_v1_chr11_+_87549059_87549059	30.253	Rfx3_Rfx1_Rfx4	ENSRNOT00000002567|Ccdc74a|ENSRNOG00000001876|coiled-coil domain containing 74A [Source:RGD Symbol%3BAcc:1588214]
rn6_v1_chr4_-_79989572_79989572	29.8964	Rfx3_Rfx1_Rfx4	ENSRNOT00000013264|Dfna5|ENSRNOG00000009970|deafness%2C autosomal dominant 5 (human) [Source:RGD Symbol%3BAcc:727871]	ENSRNOT00000086453|Dfna5|ENSRNOG00000009970|deafness%2C autosomal dominant 5 (human) [Source:RGD Symbol%3BAcc:727871]
rn6_v1_chr10_+_59259955_59259955	29.8916	Rfx3_Rfx1_Rfx4	ENSRNOT00000021816|Ankfy1|ENSRNOG00000016212|ankyrin repeat and FYVE domain containing 1 [Source:RGD Symbol%3BAcc:1309598]
rn6_v1_chr9_+_47987_47987	29.7996	Rfx3_Rfx1_Rfx4	ENSRNOT00000066582|Efhb|ENSRNOG00000012618|EF hand domain family%2C member B [Source:RGD Symbol%3BAcc:1566407]
rn6_v1_chr5_+_136406308_136406308	29.4758	Rfx3_Rfx1_Rfx4	ENSRNOT00000072492|Eri3|ENSRNOG00000019381|ERI1 exoribonuclease family member 3 [Source:RGD Symbol%3BAcc:1595859]
rn6_v1_chr1_+_220096422_220096422	29.4372	Rfx3_Rfx1_Rfx4	ENSRNOT00000034771|Ccdc87|ENSRNOG00000025247|coiled-coil domain containing 87 [Source:RGD Symbol%3BAcc:1596153]
rn6_v1_chr16_+_7035068_7035068	29.2967	Rfx3_Rfx1_Rfx4	ENSRNOT00000024296|Nek4|ENSRNOG00000017997|NIMA-related kinase 4 [Source:RGD Symbol%3BAcc:1304995]
rn6_v1_chr12_-_37425596_37425596	29.2529	Rfx3_Rfx1_Rfx4	ENSRNOT00000084553|Tctn2|ENSRNOG00000052704|tectonic family member 2 [Source:RGD Symbol%3BAcc:1591895]
rn6_v1_chr8_+_117297670_117297670	28.8725	Rfx3_Rfx1_Rfx4	ENSRNOT00000082628|Qars|ENSRNOG00000060912|glutaminyl-tRNA synthetase [Source:RGD Symbol%3BAcc:1359448]
rn6_v1_chr7_-_76294663_76294663	28.6806	Rfx3_Rfx1_Rfx4	ENSRNOT00000064513|Ncald|ENSRNOG00000042978|neurocalcin delta [Source:RGD Symbol%3BAcc:1560287]
rn6_v1_chr18_+_30283675_30283675	28.5721	Rfx3_Rfx1_Rfx4	ENSRNOT00000027229|Pcdhb1|ENSRNOG00000020103|protocadherin beta 1 [Source:RGD Symbol%3BAcc:1308760]
rn6_v1_chr10_+_72486152_72486152	28.5333	Rfx3_Rfx1_Rfx4	ENSRNOT00000004193|RGD1310166|ENSRNOG00000003143|similar to Chromodomain-helicase-DNA-binding protein 1 (CHD-1) [Source:RGD Symbol%3BAcc:1310166]
rn6_v1_chr1_-_241460868_241460868	28.4885	Rfx3_Rfx1_Rfx4	ENSRNOT00000054776|RGD1560242|ENSRNOG00000036615|similar to RIKEN cDNA 1700028P14 [Source:RGD Symbol%3BAcc:1560242]
rn6_v1_chr19_-_38321528_38321528	28.4685	Rfx3_Rfx1_Rfx4	ENSRNOT00000031977|Smpd3|ENSRNOG00000000257|sphingomyelin phosphodiesterase 3 [Source:RGD Symbol%3BAcc:619754]
rn6_v1_chr3_+_159823878_159823878	28.2343	Rfx3_Rfx1_Rfx4	ENSRNOT00000011748|Gdap1l1|ENSRNOG00000008790|ganglioside-induced differentiation-associated protein 1-like 1 [Source:RGD Symbol%3BAcc:1304960]
rn6_v1_chr12_+_19314251_19314251	28.1819	Rfx3_Rfx1_Rfx4	ENSRNOT00000001827|Ap4m1|ENSRNOG00000001353|adaptor-related protein complex 4%2C mu 1 subunit [Source:RGD Symbol%3BAcc:1310233]
rn6_v1_chr3_-_127569093_127569093	28.0759	Rfx3_Rfx1_Rfx4	ENSRNOT00000034567|Tmx4|ENSRNOG00000024852|thioredoxin-related transmembrane protein 4 [Source:RGD Symbol%3BAcc:1305146]
rn6_v1_chr18_+_70263359_70263359	27.8614	Rfx3_Rfx1_Rfx4	ENSRNOT00000019573|Cfap53|ENSRNOG00000014585|cilia and flagella associated protein 53 [Source:RGD Symbol%3BAcc:1306734]
rn6_v1_chr10_+_74436534_74436534	27.8263	Rfx3_Rfx1_Rfx4	ENSRNOT00000008298|Trim37|ENSRNOG00000006248|tripartite motif-containing 37 [Source:RGD Symbol%3BAcc:1308349]
rn6_v1_chr10_+_74436208_74436294	27.807	Rfx3_Rfx1_Rfx4	ENSRNOT00000090921|Trim37|ENSRNOG00000006248|tripartite motif-containing 37 [Source:RGD Symbol%3BAcc:1308349]	ENSRNOT00000091163|Trim37|ENSRNOG00000006248|tripartite motif-containing 37 [Source:RGD Symbol%3BAcc:1308349]
rn6_v1_chr20_-_32211453_32211453	27.643	Rfx3_Rfx1_Rfx4	ENSRNOT00000000444|Kif1bp|ENSRNOG00000000395|KIF1 binding protein [Source:RGD Symbol%3BAcc:1593126]
rn6_v1_chr17_+_36334147_36334147	27.5467	Rfx3_Rfx1_Rfx4	ENSRNOT00000050261|E2f3|ENSRNOG00000029273|E2F transcription factor 3 [Source:RGD Symbol%3BAcc:1561600]
rn6_v1_chr5_-_173098816_173098816	27.4906	Rfx3_Rfx1_Rfx4	ENSRNOT00000023696|Mib2|ENSRNOG00000017564|mindbomb E3 ubiquitin protein ligase 2 [Source:RGD Symbol%3BAcc:1359469]
rn6_v1_chr1_-_219532609_219532609	27.3924	Rfx3_Rfx1_Rfx4	ENSRNOT00000025641|Ankrd13d|ENSRNOG00000028247|ankyrin repeat domain 13D [Source:RGD Symbol%3BAcc:1309156]
rn6_v1_chr5_-_166726794_166726794	27.3577	Rfx3_Rfx1_Rfx4	ENSRNOT00000022799|Slc25a33|ENSRNOG00000016949|solute carrier family 25 member 33 [Source:RGD Symbol%3BAcc:1583942]
rn6_v1_chr6_+_132246602_132246602	27.31	Rfx3_Rfx1_Rfx4	ENSRNOT00000009896|Cyp46a1|ENSRNOG00000007147|cytochrome P450%2C family 46%2C subfamily a%2C polypeptide 1 [Source:RGD Symbol%3BAcc:1306605]
rn6_v1_chr1_-_206417143_206417143	27.2827	Rfx3_Rfx1_Rfx4	ENSRNOT00000091863|LOC100302465|ENSRNOG00000027542|hypothetical LOC100302465 [Source:RGD Symbol%3BAcc:2311471]	ENSRNOT00000073836|LOC100302465|ENSRNOG00000027542|hypothetical LOC100302465 [Source:RGD Symbol%3BAcc:2311471]
rn6_v1_chr10_-_13374808_13374808	27.2313	Rfx3_Rfx1_Rfx4	ENSRNOT00000060888|Prss22|ENSRNOG00000039698|protease%2C serine%2C 22 [Source:RGD Symbol%3BAcc:1310880]
rn6_v1_chr10_+_96663740_96663740	27.1244	Rfx3_Rfx1_Rfx4	ENSRNOT00000037067|Cep112|ENSRNOG00000024557|centrosomal protein 112 [Source:RGD Symbol%3BAcc:1564168]
rn6_v1_chr16_+_26859397_26859397	26.8609	Rfx3_Rfx1_Rfx4	ENSRNOT00000044171|Msmo1|ENSRNOG00000032297|methylsterol monooxygenase 1 [Source:RGD Symbol%3BAcc:620281]
rn6_v1_chr7_+_117055395_117055395	26.8391	Rfx3_Rfx1_Rfx4	ENSRNOT00000091960|Mapk15|ENSRNOG00000009336|mitogen-activated protein kinase 15 [Source:RGD Symbol%3BAcc:628675]
rn6_v1_chr19_+_10024947_10024947	26.8283	Rfx3_Rfx1_Rfx4	ENSRNOT00000061392|Cfap20|ENSRNOG00000042179|cilia and flagella associated protein 20 [Source:RGD Symbol%3BAcc:1308493]
rn6_v1_chr1_-_157461588_157461588	26.7218	Rfx3_Rfx1_Rfx4	ENSRNOT00000068402|Ankrd42|ENSRNOG00000009664|ankyrin repeat domain 42 [Source:RGD Symbol%3BAcc:1310789]
rn6_v1_chr7_+_117055623_117055623	26.5958	Rfx3_Rfx1_Rfx4	ENSRNOT00000012461|Mapk15|ENSRNOG00000009336|mitogen-activated protein kinase 15 [Source:RGD Symbol%3BAcc:628675]
rn6_v1_chr6_+_1534594_1534594	26.5366	Rfx3_Rfx1_Rfx4	ENSRNOT00000007000|Ndufaf7|ENSRNOG00000005279|NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:RGD Symbol%3BAcc:1311578]
rn6_v1_chr5_+_136406130_136406130	26.2315	Rfx3_Rfx1_Rfx4	ENSRNOT00000093099|Eri3|ENSRNOG00000019381|ERI1 exoribonuclease family member 3 [Source:RGD Symbol%3BAcc:1595859]
rn6_v1_chr19_+_37795658_37795658	26.0948	Rfx3_Rfx1_Rfx4	ENSRNOT00000025686|Tsnaxip1|ENSRNOG00000018954|translin-associated factor X interacting protein 1 [Source:RGD Symbol%3BAcc:1565341]
rn6_v1_chr17_+_53229785_53229785	25.5451	Rfx3_Rfx1_Rfx4	ENSRNOT00000082040|Hecw1|ENSRNOG00000016046|HECT%2C C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:RGD Symbol%3BAcc:1561038]
rn6_v1_chr10_-_11877584_11877584	25.366	Rfx3_Rfx1_Rfx4	ENSRNOT00000078577|Cluap1|ENSRNOG00000007117|clusterin associated protein 1 [Source:RGD Symbol%3BAcc:1359189]
rn6_v1_chr9_+_10995198_10995198	25.2601	Rfx3_Rfx1_Rfx4	ENSRNOT00000089071|Ubxn6|ENSRNOG00000048509|UBX domain protein 6 [Source:RGD Symbol%3BAcc:1590866]
rn6_v1_chr11_+_70967223_70967223	25.1678	Rfx3_Rfx1_Rfx4	ENSRNOT00000087633|Iqcg|ENSRNOG00000026420|IQ motif containing G [Source:RGD Symbol%3BAcc:1311606]
rn6_v1_chr7_+_27240876_27240876	25.1383	Rfx3_Rfx1_Rfx4	ENSRNOT00000091725|LOC362863|ENSRNOG00000026807|first gene upstream of Nt5dc3 [Source:RGD Symbol%3BAcc:1302940]
rn6_v1_chr15_+_4285052_4285052	25.1378	Rfx3_Rfx1_Rfx4	ENSRNOT00000035345|Cfap70|ENSRNOG00000007046|cilia and flagella associated protein 70 [Source:RGD Symbol%3BAcc:1307577]
rn6_v1_chr18_-_28454756_28454756	25.0525	Rfx3_Rfx1_Rfx4	ENSRNOT00000040091|Spata24|ENSRNOG00000019976|spermatogenesis associated 24 [Source:RGD Symbol%3BAcc:1311742]
rn6_v1_chr11_+_64488194_64488194	24.8448	Rfx3_Rfx1_Rfx4	ENSRNOT00000030268|RGD1306995|ENSRNOG00000042555|similar to hypothetical protein FLJ32859 [Source:RGD Symbol%3BAcc:1306995]
rn6_v1_chr6_-_146099053_146099053	24.6074	Rfx3_Rfx1_Rfx4	ENSRNOT00000007233|Dnah11|ENSRNOG00000005451|dynein%2C axonemal%2C heavy chain 11 [Source:RGD Symbol%3BAcc:621088]
rn6_v1_chr1_-_100926335_100926335	24.4687	Rfx3_Rfx1_Rfx4	ENSRNOT00000020304|Ap2a1|ENSRNOG00000026243|adaptor-related protein complex 2%2C alpha 1 subunit [Source:RGD Symbol%3BAcc:1306254]
rn6_v1_chr6_+_36089433_36089475	24.4183	Rfx3_Rfx1_Rfx4	ENSRNOT00000090438|Nt5c1b|ENSRNOG00000004296|5'-nucleotidase%2C cytosolic IB [Source:RGD Symbol%3BAcc:1309705]	ENSRNOT00000005731|Nt5c1b|ENSRNOG00000004296|5'-nucleotidase%2C cytosolic IB [Source:RGD Symbol%3BAcc:1309705]
rn6_v1_chr1_+_82473737_82473737	24.3754	Rfx3_Rfx1_Rfx4	ENSRNOT00000028029|B9d2|ENSRNOG00000028753|B9 protein domain 2 [Source:RGD Symbol%3BAcc:1566122]
rn6_v1_chr5_+_169659188_169659188	24.3448	Rfx3_Rfx1_Rfx4	ENSRNOT00000066623|Nphp4|ENSRNOG00000011967|nephrocystin 4 [Source:RGD Symbol%3BAcc:1560172]
rn6_v1_chr4_-_27726943_27726943	24.1996	Rfx3_Rfx1_Rfx4	ENSRNOT00000068499|LOC500007|ENSRNOG00000009135|similar to EF hand calcium binding domain 1 [Source:RGD Symbol%3BAcc:1588445]
rn6_v1_chr9_+_10995548_10995548	24.0964	Rfx3_Rfx1_Rfx4	ENSRNOT00000070986|Ubxn6|ENSRNOG00000048509|UBX domain protein 6 [Source:RGD Symbol%3BAcc:1590866]
rn6_v1_chr7_+_11838639_11838639	23.5969	Rfx3_Rfx1_Rfx4	ENSRNOT00000025878|Ap3d1|ENSRNOG00000018977|adaptor-related protein complex 3%2C delta 1 subunit [Source:RGD Symbol%3BAcc:1308659]
rn6_v1_chr11_-_31103520_31103520	23.3831	Rfx3_Rfx1_Rfx4	ENSRNOT00000030279|RGD1306954|ENSRNOG00000021399|similar to RIKEN cDNA 1110004E09 [Source:RGD Symbol%3BAcc:1306954]
rn6_v1_chr19_+_9895121_9895121	23.3621	Rfx3_Rfx1_Rfx4	ENSRNOT00000033953|Prss54|ENSRNOG00000023092|protease%2C serine%2C 54 [Source:RGD Symbol%3BAcc:1307877]
rn6_v1_chr5_-_77945016_77945016	23.2251	Rfx3_Rfx1_Rfx4	ENSRNOT00000076223|Zfp37|ENSRNOG00000051078|zinc finger protein 37 [Source:RGD Symbol%3BAcc:620723]
rn6_v1_chr3_+_155103150_155103150	23.151	Rfx3_Rfx1_Rfx4	ENSRNOT00000020720|Slc32a1|ENSRNOG00000015393|solute carrier family 32 member 1 [Source:RGD Symbol%3BAcc:621402]
rn6_v1_chr3_-_113231790_113231790	23.0996	Rfx3_Rfx1_Rfx4	ENSRNOT00000019025|Tp53bp1|ENSRNOG00000013837|tumor protein p53 binding protein 1 [Source:RGD Symbol%3BAcc:1308039]
rn6_v1_chr20_+_2094931_2094931	22.8772	Rfx3_Rfx1_Rfx4	ENSRNOT00000001013|Ppp1r11|ENSRNOG00000000780|protein phosphatase 1%2C regulatory (inhibitor) subunit 11 [Source:RGD Symbol%3BAcc:1303163]
rn6_v1_chr5_-_73494030_73494030	22.7618	Rfx3_Rfx1_Rfx4	ENSRNOT00000022291|Actl7b|ENSRNOG00000016621|actin-like 7b [Source:RGD Symbol%3BAcc:1305655]
rn6_v1_chr16_+_23668595_23668595	22.4778	Rfx3_Rfx1_Rfx4	ENSRNOT00000067886|Psd3|ENSRNOG00000013884|pleckstrin and Sec7 domain containing 3 [Source:RGD Symbol%3BAcc:1559968]
rn6_v1_chr9_-_100070650_100070650	22.4323	Rfx3_Rfx1_Rfx4	ENSRNOT00000071359|Ankmy1|ENSRNOG00000048567|ankyrin repeat and MYND domain containing 1 [Source:RGD Symbol%3BAcc:1595229]
rn6_v1_chr1_-_198454914_198454914	22.2925	Rfx3_Rfx1_Rfx4	ENSRNOT00000049044|Prrt2|ENSRNOG00000029366|proline-rich transmembrane protein 2 [Source:RGD Symbol%3BAcc:1564195]
rn6_v1_chr2_-_22059149_22059149	22.2602	Rfx3_Rfx1_Rfx4	ENSRNOT00000031909|Fam151b|ENSRNOG00000024136|family with sequence similarity 151%2C member B [Source:RGD Symbol%3BAcc:1561110]
rn6_v1_chr7_+_144052061_144052202	22.2137	Rfx3_Rfx1_Rfx4	ENSRNOT00000020103|Amhr2|ENSRNOG00000014850|anti-Mullerian hormone receptor type 2 [Source:RGD Symbol%3BAcc:70964]	ENSRNOT00000091378|Amhr2|ENSRNOG00000014850|anti-Mullerian hormone receptor type 2 [Source:RGD Symbol%3BAcc:70964]
rn6_v1_chr7_-_118332577_118332577	22.1757	Rfx3_Rfx1_Rfx4	ENSRNOT00000090370|Rbfox2|ENSRNOG00000004688|RNA binding protein%2C fox-1 homolog 2 [Source:RGD Symbol%3BAcc:1311838]
rn6_v1_chr20_-_37700937_37700937	22.1031	Rfx3_Rfx1_Rfx4	ENSRNOT00000001051|Tbc1d32|ENSRNOG00000000802|TBC1 domain family%2C member 32 [Source:RGD Symbol%3BAcc:2323599]
rn6_v1_chr3_+_80833272_80833272	22.0615	Rfx3_Rfx1_Rfx4	ENSRNOT00000023583|Chrm4|ENSRNOG00000017556|cholinergic receptor%2C muscarinic 4 [Source:RGD Symbol%3BAcc:2344]
rn6_v1_chr12_+_47074200_47074200	22.006	Rfx3_Rfx1_Rfx4	ENSRNOT00000014910|Dynll1|ENSRNOG00000011222|dynein light chain LC8-type 1 [Source:RGD Symbol%3BAcc:619866]
rn6_v1_chr2_+_208420206_208420405	21.9032	Rfx3_Rfx1_Rfx4	ENSRNOT00000090500|LOC100911453|ENSRNOG00000046022|methylosome protein 50-like [Source:RGD Symbol%3BAcc:6492663]	ENSRNOT00000076065|LOC100911453|ENSRNOG00000046022|methylosome protein 50-like [Source:RGD Symbol%3BAcc:6492663]	ENSRNOT00000086279|Wdr77|ENSRNOG00000016394|WD repeat domain 77 [Source:RGD Symbol%3BAcc:1310479]	ENSRNOT00000073644|LOC100911453|ENSRNOG00000046022|methylosome protein 50-like [Source:RGD Symbol%3BAcc:6492663]
rn6_v1_chr11_-_31892531_31892531	21.8015	Rfx3_Rfx1_Rfx4	ENSRNOT00000033745|Cryzl1|ENSRNOG00000028014|crystallin zeta like 1 [Source:RGD Symbol%3BAcc:1310219]
rn6_v1_chr1_-_188572141_188572141	21.571	Rfx3_Rfx1_Rfx4	ENSRNOT00000073003|Knop1|ENSRNOG00000046147|lysine-rich nucleolar protein 1 [Source:RGD Symbol%3BAcc:1565096]
rn6_v1_chr18_+_73564247_73564312	21.3795	Rfx3_Rfx1_Rfx4	ENSRNOT00000077679|St8sia5|ENSRNOG00000022691|ST8 alpha-N-acetyl-neuraminide alpha-2%2C8-sialyltransferase 5 [Source:RGD Symbol%3BAcc:1302934]	ENSRNOT00000035317|St8sia5|ENSRNOG00000022691|ST8 alpha-N-acetyl-neuraminide alpha-2%2C8-sialyltransferase 5 [Source:RGD Symbol%3BAcc:1302934]
rn6_v1_chr1_-_226630900_226630900	21.3368	Rfx3_Rfx1_Rfx4	ENSRNOT00000028092|Tmem138|ENSRNOG00000020693|transmembrane protein 138 [Source:RGD Symbol%3BAcc:735168]
rn6_v1_chr10_+_55687050_55687050	21.1617	Rfx3_Rfx1_Rfx4	ENSRNOT00000057136|Per1|ENSRNOG00000007387|period circadian clock 1 [Source:RGD Symbol%3BAcc:727863]
rn6_v1_chr5_+_172488708_172488708	21.0698	Rfx3_Rfx1_Rfx4	ENSRNOT00000019930|Morn1|ENSRNOG00000014642|MORN repeat containing 1 [Source:RGD Symbol%3BAcc:1359433]
rn6_v1_chr17_+_21521505_21521505	20.9741	Rfx3_Rfx1_Rfx4	ENSRNOT00000020672|Mak|ENSRNOG00000015101|male germ cell-associated kinase [Source:RGD Symbol%3BAcc:3036]
rn6_v1_chrX_+_83570346_83570346	20.954	Rfx3_Rfx1_Rfx4	ENSRNOT00000045603|Ube2d4l1|ENSRNOG00000029497|ubiquitin-conjugating enzyme E2D 4 like 1 [Source:RGD Symbol%3BAcc:2323338]
rn6_v1_chr7_-_129919946_129919946	20.8653	Rfx3_Rfx1_Rfx4	ENSRNOT00000079976|AABR07058658.1|ENSRNOG00000032311|
rn6_v1_chr1_-_47213749_47213749	20.6398	Rfx3_Rfx1_Rfx4	ENSRNOT00000024656|Dynlt1|ENSRNOG00000018207|dynein light chain Tctex-type 1 [Source:RGD Symbol%3BAcc:620261]
rn6_v1_chr13_-_89745835_89745835	20.5397	Rfx3_Rfx1_Rfx4	ENSRNOT00000005352|Klhdc9|ENSRNOG00000004022|kelch domain containing 9 [Source:RGD Symbol%3BAcc:1561025]
rn6_v1_chr5_+_70441123_70441123	20.4222	Rfx3_Rfx1_Rfx4	ENSRNOT00000087517|Fsd1l|ENSRNOG00000059876|fibronectin type III and SPRY domain containing 1-like [Source:RGD Symbol%3BAcc:1564809]
rn6_v1_chr7_+_99609191_99609191	20.1216	Rfx3_Rfx1_Rfx4	ENSRNOT00000012883|Sqle|ENSRNOG00000009550|squalene epoxidase [Source:RGD Symbol%3BAcc:3755]
rn6_v1_chr14_+_89253373_89253373	20.0107	Rfx3_Rfx1_Rfx4	ENSRNOT00000035922|LOC688553|ENSRNOG00000037632|hypothetical protein LOC688553 [Source:RGD Symbol%3BAcc:1587626]
rn6_v1_chr17_+_81455955_81455955	19.8839	Rfx3_Rfx1_Rfx4	ENSRNOT00000044313|Slc39a12|ENSRNOG00000025639|solute carrier family 39 member 12 [Source:RGD Symbol%3BAcc:1309305]
rn6_v1_chr14_-_1505085_1505085	19.8675	Rfx3_Rfx1_Rfx4	ENSRNOT00000090361|LOC102554799|ENSRNOG00000054053|uncharacterized LOC102554799 [Source:RGD Symbol%3BAcc:7545280]
rn6_v1_chr16_+_21282467_21282467	19.5828	Rfx3_Rfx1_Rfx4	ENSRNOT00000065345|Yjefn3|ENSRNOG00000039191|YjeF N-terminal domain containing 3 [Source:RGD Symbol%3BAcc:1563236]
rn6_v1_chr20_+_4530342_4530365	19.5284	Rfx3_Rfx1_Rfx4	ENSRNOT00000076352|Nelfe|ENSRNOG00000000420|negative elongation factor complex member E [Source:RGD Symbol%3BAcc:1303325]	ENSRNOT00000000478|Nelfe|ENSRNOG00000000420|negative elongation factor complex member E [Source:RGD Symbol%3BAcc:1303325]	ENSRNOT00000075925|Nelfe|ENSRNOG00000000420|negative elongation factor complex member E [Source:RGD Symbol%3BAcc:1303325]
rn6_v1_chr7_-_119409710_119409710	19.5202	Rfx3_Rfx1_Rfx4	ENSRNOT00000008450|Ift27|ENSRNOG00000006440|intraflagellar transport 27 [Source:RGD Symbol%3BAcc:1308703]
rn6_v1_chr6_+_26390689_26390764	19.3325	Rfx3_Rfx1_Rfx4	ENSRNOT00000079762|Ift172|ENSRNOG00000057813|intraflagellar transport 172 [Source:RGD Symbol%3BAcc:620744]	ENSRNOT00000091528|Ift172|ENSRNOG00000057813|intraflagellar transport 172 [Source:RGD Symbol%3BAcc:620744]
rn6_v1_chr4_+_66090209_66090209	18.9988	Rfx3_Rfx1_Rfx4	ENSRNOT00000031193|Ttc26|ENSRNOG00000027617|tetratricopeptide repeat domain 26 [Source:RGD Symbol%3BAcc:1561363]
rn6_v1_chr2_-_116372226_116372226	18.8016	Rfx3_Rfx1_Rfx4	ENSRNOT00000011932|Lrriq4|ENSRNOG00000009004|leucine-rich repeats and IQ motif containing 4 [Source:RGD Symbol%3BAcc:2323202]
rn6_v1_chr16_+_71241335_71241335	18.7095	Rfx3_Rfx1_Rfx4	ENSRNOT00000066144|Letm2|ENSRNOG00000026180|leucine zipper and EF-hand containing transmembrane protein 2 [Source:RGD Symbol%3BAcc:1311220]
rn6_v1_chr19_+_57614628_57614628	18.6592	Rfx3_Rfx1_Rfx4	ENSRNOT00000026617|Gnpat|ENSRNOG00000019205|glyceronephosphate O-acyltransferase [Source:RGD Symbol%3BAcc:620179]
rn6_v1_chr5_+_142797366_142797366	18.657	Rfx3_Rfx1_Rfx4	ENSRNOT00000031928|Mtf1|ENSRNOG00000025724|metal-regulatory transcription factor 1 [Source:RGD Symbol%3BAcc:1308956]
rn6_v1_chr2_-_188528127_188528195	18.6455	Rfx3_Rfx1_Rfx4	ENSRNOT00000064715|Mtx1|ENSRNOG00000042977|Metaxin 1 [Source:RGD Symbol%3BAcc:1559791]	ENSRNOT00000086683|Mtx1|ENSRNOG00000042977|Metaxin 1 [Source:RGD Symbol%3BAcc:1559791]
rn6_v1_chr8_-_71050853_71050853	18.6039	Rfx3_Rfx1_Rfx4	ENSRNOT00000073571|Ankdd1a|ENSRNOG00000015554|ankyrin repeat and death domain containing 1A [Source:RGD Symbol%3BAcc:1586052]
rn6_v1_chr6_-_42312915_42312935	18.5842	Rfx3_Rfx1_Rfx4	ENSRNOT00000033550|LOC690276|ENSRNOG00000024338|hypothetical protein LOC690276 [Source:RGD Symbol%3BAcc:1582838]	ENSRNOT00000081004|LOC690276|ENSRNOG00000024338|hypothetical protein LOC690276 [Source:RGD Symbol%3BAcc:1582838]
rn6_v1_chr8_+_117660964_117660964	18.3281	Rfx3_Rfx1_Rfx4	ENSRNOT00000049240|Tmem89|ENSRNOG00000031141|transmembrane protein 89 [Source:RGD Symbol%3BAcc:1564575]
rn6_v1_chr5_-_25721072_25721072	18.2455	Rfx3_Rfx1_Rfx4	ENSRNOT00000021839|Tmem67|ENSRNOG00000016187|transmembrane protein 67 [Source:RGD Symbol%3BAcc:1586167]
rn6_v1_chrX_-_123788898_123788898	18.2319	Rfx3_Rfx1_Rfx4	ENSRNOT00000009123|Akap14|ENSRNOG00000006899|A-kinase anchoring protein 14 [Source:RGD Symbol%3BAcc:708510]
rn6_v1_chr14_-_3300200_3300200	18.1166	Rfx3_Rfx1_Rfx4	ENSRNOT00000037931|Btbd8|ENSRNOG00000023446|BTB (POZ) domain containing 8 [Source:RGD Symbol%3BAcc:2321418]
rn6_v1_chr12_+_41463922_41463922	17.8865	Rfx3_Rfx1_Rfx4	ENSRNOT00000089378|Cfap73|ENSRNOG00000056407|cilia and flagella associated protein 73 [Source:RGD Symbol%3BAcc:1561303]
rn6_v1_chr20_+_33945829_33945829	17.7827	Rfx3_Rfx1_Rfx4	ENSRNOT00000064063|LOC103689994|ENSRNOG00000047471|radial spoke head protein 4 homolog A [Source:RGD Symbol%3BAcc:9339057]
rn6_v1_chr5_+_142332607_142332607	17.7502	Rfx3_Rfx1_Rfx4	ENSRNOT00000072841|LOC100909856|ENSRNOG00000050240|metal regulatory transcription factor 1-like [Source:RGD Symbol%3BAcc:6501193]
rn6_v1_chr1_-_226353611_226353611	17.5542	Rfx3_Rfx1_Rfx4	ENSRNOT00000037624|Dagla|ENSRNOG00000027264|diacylglycerol lipase%2C alpha [Source:RGD Symbol%3BAcc:1359461]
rn6_v1_chr10_+_65805860_65805860	17.5482	Rfx3_Rfx1_Rfx4	ENSRNOT00000011795|Ift20|ENSRNOG00000008891|intraflagellar transport 20 [Source:RGD Symbol%3BAcc:1309400]
rn6_v1_chr7_+_12820840_12820840	17.5336	Rfx3_Rfx1_Rfx4	ENSRNOT00000012317|Rnf126|ENSRNOG00000009028|ring finger protein 126 [Source:RGD Symbol%3BAcc:1306011]
rn6_v1_chr5_-_169658875_169658875	17.3199	Rfx3_Rfx1_Rfx4	ENSRNOT00000015840|Kcnab2|ENSRNOG00000011550|potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:RGD Symbol%3BAcc:61828]
rn6_v1_chr2_-_123323170_123323170	17.3027	Rfx3_Rfx1_Rfx4	ENSRNOT00000021453|Bbs7|ENSRNOG00000015816|Bardet-Biedl syndrome 7 [Source:RGD Symbol%3BAcc:1309264]
rn6_v1_chr19_+_38162515_38162515	17.2888	Rfx3_Rfx1_Rfx4	ENSRNOT00000027117|Slc7a6|ENSRNOG00000019943|solute carrier family 7 member 6 [Source:RGD Symbol%3BAcc:1309193]
rn6_v1_chr7_-_138039630_138039630	17.0321	Rfx3_Rfx1_Rfx4	ENSRNOT00000008138|Slc38a1|ENSRNOG00000005291|solute carrier family 38%2C member 1 [Source:RGD Symbol%3BAcc:69645]
rn6_v1_chr2_+_205160405_205160405	16.8405	Rfx3_Rfx1_Rfx4	ENSRNOT00000035605|Tspan2|ENSRNOG00000023338|tetraspanin 2 [Source:RGD Symbol%3BAcc:620982]
rn6_v1_chr13_-_82607379_82607379	16.6652	Rfx3_Rfx1_Rfx4	ENSRNOT00000051763|Blzf1|ENSRNOG00000002884|basic leucine zipper nuclear factor 1 [Source:RGD Symbol%3BAcc:1562452]
rn6_v1_chr2_+_208577388_208577388	16.0289	Rfx3_Rfx1_Rfx4	ENSRNOT00000022571|Wdr77|ENSRNOG00000016394|WD repeat domain 77 [Source:RGD Symbol%3BAcc:1310479]
rn6_v1_chrX_+_54553878_54553878	15.834	Rfx3_Rfx1_Rfx4	ENSRNOT00000040231|Samt3|ENSRNOG00000029010|spermatogenesis associated multipass transmembrane protein 3 [Source:RGD Symbol%3BAcc:1583524]
rn6_v1_chr10_-_91117889_91117889	15.7863	Rfx3_Rfx1_Rfx4	ENSRNOT00000031498|Dcakd|ENSRNOG00000021682|dephospho-CoA kinase domain containing [Source:RGD Symbol%3BAcc:1359211]
rn6_v1_chr2_-_23941084_23941084	15.6789	Rfx3_Rfx1_Rfx4	ENSRNOT00000084729|Scamp1|ENSRNOG00000061582|secretory carrier membrane protein 1 [Source:RGD Symbol%3BAcc:3625]
rn6_v1_chr19_-_37427989_37427989	15.6539	Rfx3_Rfx1_Rfx4	ENSRNOT00000022863|Tppp3|ENSRNOG00000016890|tubulin polymerization-promoting protein family member 3 [Source:RGD Symbol%3BAcc:1305061]
rn6_v1_chr18_+_47740328_47740328	15.642	Rfx3_Rfx1_Rfx4	ENSRNOT00000025119|Sncaip|ENSRNOG00000018254|synuclein%2C alpha interacting protein [Source:RGD Symbol%3BAcc:1309283]
rn6_v1_chr7_-_2972521_2972521	15.4593	Rfx3_Rfx1_Rfx4	ENSRNOT00000061995|Zc3h10|ENSRNOG00000040281|zinc finger CCCH type containing 10 [Source:RGD Symbol%3BAcc:1587846]
rn6_v1_chr2_-_173836854_173836854	15.4277	Rfx3_Rfx1_Rfx4	ENSRNOT00000074278|Wdr49|ENSRNOG00000024628|WD repeat domain 49 [Source:RGD Symbol%3BAcc:1564622]
rn6_v1_chr3_-_66394764_66394764	15.3314	Rfx3_Rfx1_Rfx4	ENSRNOT00000075832|Cerkl|ENSRNOG00000030212|ceramide kinase-like [Source:RGD Symbol%3BAcc:1561057]
rn6_v1_chr6_+_108167716_108167716	15.1374	Rfx3_Rfx1_Rfx4	ENSRNOT00000064426|Lin52|ENSRNOG00000043441|lin-52 DREAM MuvB core complex component [Source:RGD Symbol%3BAcc:1306798]
rn6_v1_chr11_-_61294022_61294022	14.7817	Rfx3_Rfx1_Rfx4	ENSRNOT00000064385|Spice1|ENSRNOG00000039024|spindle and centriole associated protein 1 [Source:RGD Symbol%3BAcc:1310729]
rn6_v1_chr17_+_76359022_76359042	14.7086	Rfx3_Rfx1_Rfx4	ENSRNOT00000039621|Sec61a2|ENSRNOG00000023278|Sec61 translocon alpha 2 subunit [Source:RGD Symbol%3BAcc:1305948]	ENSRNOT00000092481|Sec61a2|ENSRNOG00000023278|Sec61 translocon alpha 2 subunit [Source:RGD Symbol%3BAcc:1305948]
rn6_v1_chr9_+_10033011_10033011	14.6536	Rfx3_Rfx1_Rfx4	ENSRNOT00000073683|Gtf2f1|ENSRNOG00000047134|general transcription factor IIF subunit 1 [Source:RGD Symbol%3BAcc:1359646]
rn6_v1_chr4_-_126071261_126071261	14.5407	Rfx3_Rfx1_Rfx4	ENSRNOT00000080234|LOC100361920|ENSRNOG00000052174|dynein light chain 1-like [Source:RGD Symbol%3BAcc:2319160]
rn6_v1_chr1_-_13395370_13395370	14.335	Rfx3_Rfx1_Rfx4	ENSRNOT00000085519|Ccdc28a|ENSRNOG00000053347|coiled-coil domain containing 28A [Source:RGD Symbol%3BAcc:1310326]
rn6_v1_chr10_+_89376530_89376530	14.305	Rfx3_Rfx1_Rfx4	ENSRNOT00000028089|Rnd2|ENSRNOG00000020698|Rho family GTPase 2 [Source:RGD Symbol%3BAcc:1306172]
rn6_v1_chr5_-_118541928_118541928	14.2457	Rfx3_Rfx1_Rfx4	ENSRNOT00000012947|Itgb3bp|ENSRNOG00000009116|integrin subunit beta 3 binding protein [Source:RGD Symbol%3BAcc:1310044]
rn6_v1_chr3_-_11820549_11820549	14.2419	Rfx3_Rfx1_Rfx4	ENSRNOT00000020660|Cfap157|ENSRNOG00000039315|cilia and flagella associated protein 157 [Source:RGD Symbol%3BAcc:1560002]
rn6_v1_chr10_+_38877422_38877503	14.0766	Rfx3_Rfx1_Rfx4	ENSRNOT00000065229|Sept8|ENSRNOG00000007462|septin 8 [Source:RGD Symbol%3BAcc:1308449]	ENSRNOT00000083162|Sept8|ENSRNOG00000007462|septin 8 [Source:RGD Symbol%3BAcc:1308449]
rn6_v1_chr7_+_11521998_11521998	13.9974	Rfx3_Rfx1_Rfx4	ENSRNOT00000026960|Sgta|ENSRNOG00000019891|small glutamine rich tetratricopeptide repeat containing alpha [Source:RGD Symbol%3BAcc:620815]
rn6_v1_chr1_-_261140389_261140389	13.7502	Rfx3_Rfx1_Rfx4	ENSRNOT00000073193|Rrp12|ENSRNOG00000048495|ribosomal RNA processing 12 homolog [Source:RGD Symbol%3BAcc:1591867]
rn6_v1_chr1_+_23977688_23977688	13.7385	Rfx3_Rfx1_Rfx4	ENSRNOT00000014805|Tbpl1|ENSRNOG00000011114|TATA-box binding protein like 1 [Source:RGD Symbol%3BAcc:1597456]
rn6_v1_chr14_+_86652365_86652365	13.6621	Rfx3_Rfx1_Rfx4	ENSRNOT00000077428|Zmiz2|ENSRNOG00000054513|zinc finger%2C MIZ-type containing 2 [Source:RGD Symbol%3BAcc:1309256]
rn6_v1_chr14_-_21127868_21127875	13.6558	Rfx3_Rfx1_Rfx4	ENSRNOT00000020608|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]	ENSRNOT00000092172|Rufy3|ENSRNOG00000003428|RUN and FYVE domain containing 3 [Source:RGD Symbol%3BAcc:1565242]
rn6_v1_chr11_-_1819094_1819094	13.6403	Rfx3_Rfx1_Rfx4	ENSRNOT00000000911|MGC95208|ENSRNOG00000000720|similar to 4930453N24Rik protein [Source:RGD Symbol%3BAcc:1359320]
rn6_v1_chr11_+_83884048_83884048	13.509	Rfx3_Rfx1_Rfx4	ENSRNOT00000002376|LOC108348101|ENSRNOG00000001742|chloride channel protein 2 [Source:RGD Symbol%3BAcc:11384925]
rn6_v1_chr8_+_117355943_117355943	13.5044	Rfx3_Rfx1_Rfx4	ENSRNOT00000027318|Dalrd3|ENSRNOG00000020159|DALR anticodon binding domain containing 3 [Source:RGD Symbol%3BAcc:1359206]
rn6_v1_chr5_-_58106706_58106706	13.5039	Rfx3_Rfx1_Rfx4	ENSRNOT00000019561|Dctn3|ENSRNOG00000014208|dynactin subunit 3 [Source:RGD Symbol%3BAcc:1309547]
rn6_v1_chr5_+_156439633_156439633	13.4227	Rfx3_Rfx1_Rfx4	ENSRNOT00000090232|Eif4g3|ENSRNOG00000014368|eukaryotic translation initiation factor 4 gamma%2C 3 [Source:RGD Symbol%3BAcc:1311370]
rn6_v1_chr1_-_8038665_8038665	13.3538	Rfx3_Rfx1_Rfx4	ENSRNOT00000046539|Aig1|ENSRNOG00000010753|androgen-induced 1 [Source:RGD Symbol%3BAcc:1562920]
rn6_v1_chr3_+_110442637_110442637	13.3338	Rfx3_Rfx1_Rfx4	ENSRNOT00000010471|Pak6|ENSRNOG00000007925|p21 (RAC1) activated kinase 6 [Source:RGD Symbol%3BAcc:1306213]
rn6_v1_chr10_+_109638767_109638767	13.2462	Rfx3_Rfx1_Rfx4	ENSRNOT00000054966|Hgs|ENSRNOG00000036696|hepatocyte growth factor-regulated tyrosine kinase substrate [Source:RGD Symbol%3BAcc:69225]
rn6_v1_chr3_+_11653529_11653529	13.0976	Rfx3_Rfx1_Rfx4	ENSRNOT00000091048|Ak1|ENSRNOG00000049056|adenylate kinase 1 [Source:MGI Symbol%3BAcc:MGI:87977]
rn6_v1_chr1_+_217151166_217151166	13.0325	Rfx3_Rfx1_Rfx4	ENSRNOT00000071484|Shank2|ENSRNOG00000050206|SH3 and multiple ankyrin repeat domains 2 [Source:RGD Symbol%3BAcc:628772]
rn6_v1_chr8_+_85951191_85951191	12.8803	Rfx3_Rfx1_Rfx4	ENSRNOT00000037665|Cd109|ENSRNOG00000025332|CD109 molecule [Source:RGD Symbol%3BAcc:1311287]
rn6_v1_chr18_-_65768781_65768781	12.7879	Rfx3_Rfx1_Rfx4	ENSRNOT00000016189|Poli|ENSRNOG00000012111|DNA polymerase iota [Source:RGD Symbol%3BAcc:1305212]
rn6_v1_chr7_-_27240528_27240533	12.7783	Rfx3_Rfx1_Rfx4	ENSRNOT00000029435|Hsp90b1|ENSRNOG00000026963|heat shock protein 90 beta family member 1 [Source:RGD Symbol%3BAcc:1310482]	ENSRNOT00000079731|Hsp90b1|ENSRNOG00000026963|heat shock protein 90 beta family member 1 [Source:RGD Symbol%3BAcc:1310482]
rn6_v1_chr20_+_27832932_27832932	12.6769	Rfx3_Rfx1_Rfx4	ENSRNOT00000001092|Gcc2|ENSRNOG00000000823|GRIP and coiled-coil domain containing 2 [Source:RGD Symbol%3BAcc:1305732]
rn6_v1_chr6_-_94818349_94818349	12.6731	Rfx3_Rfx1_Rfx4	ENSRNOT00000005933|Gpr135|ENSRNOG00000004499|G protein-coupled receptor 135 [Source:RGD Symbol%3BAcc:727844]
rn6_v1_chr7_+_140248852_140248852	12.4684	Rfx3_Rfx1_Rfx4	ENSRNOT00000087338|RGD1305928|ENSRNOG00000057264|hypothetical LOC300207 [Source:RGD Symbol%3BAcc:1305928]
rn6_v1_chr1_-_188407132_188407132	12.396	Rfx3_Rfx1_Rfx4	ENSRNOT00000073233|Gde1|ENSRNOG00000050445|glycerophosphodiester phosphodiesterase 1 [Source:RGD Symbol%3BAcc:621788]
rn6_v1_chr20_+_32450733_32450733	12.3624	Rfx3_Rfx1_Rfx4	ENSRNOT00000036449|Rsph4a|ENSRNOG00000049696|radial spoke head 4 homolog A [Source:RGD Symbol%3BAcc:1307229]
rn6_v1_chr8_-_117382715_117382715	12.2307	Rfx3_Rfx1_Rfx4	ENSRNOT00000027466|P4htm|ENSRNOG00000020249|prolyl 4-hydroxylase%2C transmembrane [Source:RGD Symbol%3BAcc:1311848]
rn6_v1_chr17_+_55065621_55065621	12.2025	Rfx3_Rfx1_Rfx4	ENSRNOT00000086342|Zfp438|ENSRNOG00000028329|zinc finger protein 438 [Source:RGD Symbol%3BAcc:1307214]
rn6_v1_chr5_-_118673780_118673780	12.0058	Rfx3_Rfx1_Rfx4	ENSRNOT00000090393|Itgb3bp|ENSRNOG00000009116|integrin subunit beta 3 binding protein [Source:RGD Symbol%3BAcc:1310044]
rn6_v1_chr19_+_37668693_37668693	11.996	Rfx3_Rfx1_Rfx4	ENSRNOT00000084970|Pard6a|ENSRNOG00000017746|par-6 family cell polarity regulator alpha [Source:RGD Symbol%3BAcc:1303273]
rn6_v1_chr10_-_109639054_109639054	11.8924	Rfx3_Rfx1_Rfx4	ENSRNOT00000071433|Arl16|ENSRNOG00000049235|ADP-ribosylation factor like GTPase 16 [Source:RGD Symbol%3BAcc:1590059]
rn6_v1_chr19_+_26173771_26173771	11.8566	Rfx3_Rfx1_Rfx4	ENSRNOT00000005581|Fbxw9|ENSRNOG00000004212|F-box and WD repeat domain containing 9 [Source:RGD Symbol%3BAcc:1307002]
rn6_v1_chr9_-_82382272_82382272	11.8143	Rfx3_Rfx1_Rfx4	ENSRNOT00000025627|Abcb6|ENSRNOG00000018697|ATP-binding cassette%2C subfamily B (MDR/TAP)%2C member 6 [Source:RGD Symbol%3BAcc:71077]
rn6_v1_chr13_+_97702097_97702097	11.7512	Rfx3_Rfx1_Rfx4	ENSRNOT00000057787|LOC103689999|ENSRNOG00000046051|saccharopine dehydrogenase-like oxidoreductase [Source:RGD Symbol%3BAcc:9250610]
rn6_v1_chr19_-_25220010_25220010	11.7494	Rfx3_Rfx1_Rfx4	ENSRNOT00000008786|Dcaf15|ENSRNOG00000006551|DDB1 and CUL4 associated factor 15 [Source:RGD Symbol%3BAcc:1304881]
rn6_v1_chr1_-_102191287_102191287	11.6392	Rfx3_Rfx1_Rfx4	ENSRNOT00000028696|Abcc8|ENSRNOG00000021130|ATP binding cassette subfamily C member 8 [Source:RGD Symbol%3BAcc:3786]	ENSRNOT00000038798|Abcc8|ENSRNOG00000021130|ATP binding cassette subfamily C member 8 [Source:RGD Symbol%3BAcc:3786]
rn6_v1_chr3_-_96065711_96065711	11.6034	Rfx3_Rfx1_Rfx4	ENSRNOT00000006431|Dnajc24|ENSRNOG00000004842|DnaJ heat shock protein family (Hsp40) member C24 [Source:RGD Symbol%3BAcc:1564710]
rn6_v1_chr14_+_73889213_73889337	11.4764	Rfx3_Rfx1_Rfx4	ENSRNOT00000041310|Rab28|ENSRNOG00000017074|RAB28%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620891]	ENSRNOT00000081033|Rab28|ENSRNOG00000017074|RAB28%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:620891]
rn6_v1_chr14_-_6587141_6587141	11.3915	Rfx3_Rfx1_Rfx4	ENSRNOT00000061664|LOC679894|ENSRNOG00000042340|similar to THO complex subunit 2 (Tho2) [Source:RGD Symbol%3BAcc:1583596]
rn6_v1_chr9_-_66033871_66033871	11.2606	Rfx3_Rfx1_Rfx4	ENSRNOT00000035209|Als2|ENSRNOG00000023280|ALS2%2C alsin Rho guanine nucleotide exchange factor [Source:RGD Symbol%3BAcc:1310372]
rn6_v1_chr5_+_118541979_118541979	11.1943	Rfx3_Rfx1_Rfx4	ENSRNOT00000013089|Efcab7|ENSRNOG00000009782|EF-hand calcium binding domain 7 [Source:RGD Symbol%3BAcc:1561825]
rn6_v1_chr1_-_218532118_218532142	11.1086	Rfx3_Rfx1_Rfx4	ENSRNOT00000086385|Ighmbp2|ENSRNOG00000013456|immunoglobulin mu binding protein 2 [Source:RGD Symbol%3BAcc:68325]	ENSRNOT00000018487|Ighmbp2|ENSRNOG00000013456|immunoglobulin mu binding protein 2 [Source:RGD Symbol%3BAcc:68325]
rn6_v1_chr19_-_40925660_40925660	10.9686	Rfx3_Rfx1_Rfx4	ENSRNOT00000023645|Mtss1l|ENSRNOG00000017500|MTSS1L%2C I-BAR domain containing [Source:RGD Symbol%3BAcc:1309731]
rn6_v1_chr12_-_37910439_37910439	10.966	Rfx3_Rfx1_Rfx4	ENSRNOT00000001433|Ogfod2|ENSRNOG00000001081|2-oxoglutarate and iron-dependent oxygenase domain containing 2 [Source:RGD Symbol%3BAcc:1310594]
rn6_v1_chr16_-_19996716_19996836	10.965	Rfx3_Rfx1_Rfx4	ENSRNOT00000024434|Nxnl1|ENSRNOG00000042658|nucleoredoxin-like 1 [Source:RGD Symbol%3BAcc:1308296]	ENSRNOT00000080706|Nxnl1|ENSRNOG00000042658|nucleoredoxin-like 1 [Source:RGD Symbol%3BAcc:1308296]
rn6_v1_chr2_+_155718359_155718359	10.9644	Rfx3_Rfx1_Rfx4	ENSRNOT00000077973|Kcnab1|ENSRNOG00000056697|potassium voltage-gated channel subfamily A member regulatory beta subunit 1 [Source:RGD Symbol%3BAcc:61827]
rn6_v1_chr1_-_191676915_191676915	10.9272	Rfx3_Rfx1_Rfx4	ENSRNOT00000082927|Usp31|ENSRNOG00000025793|ubiquitin specific peptidase 31 [Source:RGD Symbol%3BAcc:1308183]
rn6_v1_chr13_-_35442222_35442222	10.8302	Rfx3_Rfx1_Rfx4	ENSRNOT00000086350|Inhbb|ENSRNOG00000060237|inhibin beta B subunit [Source:RGD Symbol%3BAcc:2913]
rn6_v1_chr11_+_82862695_82862817	10.5528	Rfx3_Rfx1_Rfx4	ENSRNOT00000071707|Clcn2|ENSRNOG00000050854|chloride voltage-gated channel 2 [Source:RGD Symbol%3BAcc:2361]	ENSRNOT00000073435|Clcn2|ENSRNOG00000050854|chloride voltage-gated channel 2 [Source:RGD Symbol%3BAcc:2361]
rn6_v1_chr20_-_4530126_4530126	10.5355	Rfx3_Rfx1_Rfx4	ENSRNOT00000000481|Skiv2l|ENSRNOG00000000421|Ski2 like RNA helicase [Source:RGD Symbol%3BAcc:1303059]
rn6_v1_chr4_-_28224858_28224858	10.5351	Rfx3_Rfx1_Rfx4	ENSRNOT00000091075|AABR07059632.3|ENSRNOG00000061046|
rn6_v1_chr14_+_100311173_100311173	10.4414	Rfx3_Rfx1_Rfx4	ENSRNOT00000031275|Ppp3r1|ENSRNOG00000043210|protein phosphatase 3%2C regulatory subunit B%2C alpha [Source:RGD Symbol%3BAcc:69230]
rn6_v1_chr11_+_83883879_83883879	9.84929	Rfx3_Rfx1_Rfx4	ENSRNOT00000050927|LOC108348101|ENSRNOG00000001742|chloride channel protein 2 [Source:RGD Symbol%3BAcc:11384925]
rn6_v1_chr6_+_73553210_73553210	9.84886	Rfx3_Rfx1_Rfx4	ENSRNOT00000006562|Akap6|ENSRNOG00000004841|A-kinase anchoring protein 6 [Source:RGD Symbol%3BAcc:69412]
rn6_v1_chr5_-_14367898_14367898	9.83728	Rfx3_Rfx1_Rfx4	ENSRNOT00000065402|Atp6v1h|ENSRNOG00000030862|ATPase H+ transporting V1 subunit H [Source:RGD Symbol%3BAcc:1562450]
rn6_v1_chr8_+_116318963_116318963	9.72918	Rfx3_Rfx1_Rfx4	ENSRNOT00000036556|Tusc2|ENSRNOG00000021528|tumor suppressor candidate 2 [Source:RGD Symbol%3BAcc:1561664]
rn6_v1_chr3_+_101156212_101156212	9.6974	Rfx3_Rfx1_Rfx4	ENSRNOT00000065333|Ccdc34|ENSRNOG00000005902|coiled-coil domain containing 34 [Source:RGD Symbol%3BAcc:1560583]
rn6_v1_chr1_-_198316882_198316915	9.68395	Rfx3_Rfx1_Rfx4	ENSRNOT00000085304|Taok2|ENSRNOG00000019964|TAO kinase 2 [Source:RGD Symbol%3BAcc:621590]	ENSRNOT00000064985|Taok2|ENSRNOG00000019964|TAO kinase 2 [Source:RGD Symbol%3BAcc:621590]
rn6_v1_chr9_+_17911944_17911944	9.62997	Rfx3_Rfx1_Rfx4	ENSRNOT00000080940|Spats1|ENSRNOG00000019963|spermatogenesis associated%2C serine-rich 1 [Source:RGD Symbol%3BAcc:631367]
rn6_v1_chr19_+_55423350_55423350	9.41577	Rfx3_Rfx1_Rfx4	ENSRNOT00000019740|Trappc2l|ENSRNOG00000014581|trafficking protein particle complex 2-like [Source:RGD Symbol%3BAcc:1304906]
rn6_v1_chr19_-_52217728_52217728	9.41056	Rfx3_Rfx1_Rfx4	ENSRNOT00000020859|Hsdl1|ENSRNOG00000015576|hydroxysteroid dehydrogenase like 1 [Source:RGD Symbol%3BAcc:1308433]
rn6_v1_chr1_-_213635546_213635546	9.30393	Rfx3_Rfx1_Rfx4	ENSRNOT00000018861|Sirt3|ENSRNOG00000013828|sirtuin 3 [Source:RGD Symbol%3BAcc:1308374]
rn6_v1_chr1_-_226606344_226606344	9.27883	Rfx3_Rfx1_Rfx4	ENSRNOT00000028079|Tmem216|ENSRNOG00000020692|transmembrane protein 216 [Source:RGD Symbol%3BAcc:1304607]
rn6_v1_chr12_-_24102084_24102084	9.20569	Rfx3_Rfx1_Rfx4	ENSRNOT00000001962|Rhbdd2|ENSRNOG00000001443|rhomboid domain containing 2 [Source:RGD Symbol%3BAcc:1308231]
rn6_v1_chr17_+_29438980_29438980	9.11346	Rfx3_Rfx1_Rfx4	ENSRNOT00000072056|Lyrm4|ENSRNOG00000047970|LYR motif containing 4 [Source:RGD Symbol%3BAcc:7672286]
rn6_v1_chr7_-_116872511_116872511	8.84467	Rfx3_Rfx1_Rfx4	ENSRNOT00000010120|Zc3h3|ENSRNOG00000007684|zinc finger CCCH type containing 3 [Source:RGD Symbol%3BAcc:1307276]
rn6_v1_chr8_+_48571323_48571323	8.84258	Rfx3_Rfx1_Rfx4	ENSRNOT00000059776|Ccdc153|ENSRNOG00000039086|coiled-coil domain containing 153 [Source:RGD Symbol%3BAcc:1305351]
rn6_v1_chr20_-_13706205_13706205	8.75402	Rfx3_Rfx1_Rfx4	ENSRNOT00000038623|Derl3|ENSRNOG00000028243|derlin 3 [Source:RGD Symbol%3BAcc:1597373]
rn6_v1_chr8_-_130617833_130617833	8.73374	Rfx3_Rfx1_Rfx4	ENSRNOT00000026363|Pomgnt2|ENSRNOG00000019492|protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1%2C4-) [Source:RGD Symbol%3BAcc:1304827]
rn6_v1_chr5_-_57845509_57845509	8.64183	Rfx3_Rfx1_Rfx4	ENSRNOT00000035541|Kif24|ENSRNOG00000012735|kinesin family member 24 [Source:RGD Symbol%3BAcc:1307723]
rn6_v1_chr17_+_78915604_78915604	8.63525	Rfx3_Rfx1_Rfx4	ENSRNOT00000057855|Rpp38|ENSRNOG00000038025|ribonuclease P/MRP 38 subunit [Source:RGD Symbol%3BAcc:1307474]
rn6_v1_chr16_+_7035241_7035241	8.42574	Rfx3_Rfx1_Rfx4	ENSRNOT00000084977|Nek4|ENSRNOG00000017997|NIMA-related kinase 4 [Source:RGD Symbol%3BAcc:1304995]
rn6_v1_chr7_+_12941994_12941994	8.37838	Rfx3_Rfx1_Rfx4	ENSRNOT00000010832|Odf3l2|ENSRNOG00000008199|outer dense fiber of sperm tails 3-like 2 [Source:RGD Symbol%3BAcc:1310260]
rn6_v1_chr3_+_121660110_121660110	8.31035	Rfx3_Rfx1_Rfx4	ENSRNOT00000024942|Chchd5|ENSRNOG00000018491|coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:RGD Symbol%3BAcc:1307809]
rn6_v1_chr19_-_46101250_46101250	8.30495	Rfx3_Rfx1_Rfx4	ENSRNOT00000015874|Adamts18|ENSRNOG00000011575|ADAM metallopeptidase with thrombospondin type 1 motif%2C 18 [Source:RGD Symbol%3BAcc:1560118]
rn6_v1_chr3_-_156777999_156777999	8.27062	Rfx3_Rfx1_Rfx4	ENSRNOT00000032588|Zhx3|ENSRNOG00000027988|zinc fingers and homeoboxes 3 [Source:RGD Symbol%3BAcc:631431]	ENSRNOT00000091208|Zhx3|ENSRNOG00000027988|zinc fingers and homeoboxes 3 [Source:RGD Symbol%3BAcc:631431]
rn6_v1_chr19_-_26141111_26141111	8.21301	Rfx3_Rfx1_Rfx4	ENSRNOT00000067518|Asna1|ENSRNOG00000003747|arsA arsenite transporter%2C ATP-binding%2C homolog 1 (bacterial) [Source:RGD Symbol%3BAcc:1307906]
rn6_v1_chr1_+_261337594_261337594	8.12184	Rfx3_Rfx1_Rfx4	ENSRNOT00000019874|Pi4k2a|ENSRNOG00000014675|phosphatidylinositol 4-kinase type 2 alpha [Source:RGD Symbol%3BAcc:620485]
rn6_v1_chr3_-_3691972_3691972	8.00694	Rfx3_Rfx1_Rfx4	ENSRNOT00000061735|Qsox2|ENSRNOG00000018574|quiescin sulfhydryl oxidase 2 [Source:RGD Symbol%3BAcc:1584720]
rn6_v1_chr6_-_125590049_125590049	7.92652	Rfx3_Rfx1_Rfx4	ENSRNOT00000006371|Tc2n|ENSRNOG00000004754|tandem C2 domains%2C nuclear [Source:RGD Symbol%3BAcc:1563876]
rn6_v1_chr5_+_48274477_48274485	7.83485	Rfx3_Rfx1_Rfx4	ENSRNOT00000075992|Ube2j1|ENSRNOG00000007434|ubiquitin-conjugating enzyme E2%2C J1 [Source:RGD Symbol%3BAcc:1305067]	ENSRNOT00000041271|Ube2j1|ENSRNOG00000007434|ubiquitin-conjugating enzyme E2%2C J1 [Source:RGD Symbol%3BAcc:1305067]
rn6_v1_chr12_-_30106889_30106893	7.81816	Rfx3_Rfx1_Rfx4	ENSRNOT00000065868|Tpst1|ENSRNOG00000000900|tyrosylprotein sulfotransferase 1 [Source:RGD Symbol%3BAcc:1308473]	ENSRNOT00000001200|Tpst1|ENSRNOG00000000900|tyrosylprotein sulfotransferase 1 [Source:RGD Symbol%3BAcc:1308473]
rn6_v1_chrX_-_19145409_19145409	7.63652	Rfx3_Rfx1_Rfx4	ENSRNOT00000043382|Foxr2|ENSRNOG00000030619|forkhead box R2 [Source:RGD Symbol%3BAcc:1564437]
rn6_v1_chr10_+_31074251_31074251	7.58954	Rfx3_Rfx1_Rfx4	ENSRNOT00000007978|Sox30|ENSRNOG00000006098|SRY box 30 [Source:RGD Symbol%3BAcc:1586382]
rn6_v1_chr3_+_79728796_79728796	7.52869	Rfx3_Rfx1_Rfx4	ENSRNOT00000068124|Kbtbd4|ENSRNOG00000009397|kelch repeat and BTB domain containing 4 [Source:RGD Symbol%3BAcc:1310234]
rn6_v1_chr8_+_67739800_67739800	7.52497	Rfx3_Rfx1_Rfx4	ENSRNOT00000078091|Cln6|ENSRNOG00000007164|ceroid-lipofuscinosis%2C neuronal 6%2C late infantile%2C variant [Source:RGD Symbol%3BAcc:1309714]
rn6_v1_chr2_+_262914327_262914327	7.44208	Rfx3_Rfx1_Rfx4	ENSRNOT00000029312|Negr1|ENSRNOG00000021410|neuronal growth regulator 1 [Source:RGD Symbol%3BAcc:708416]
rn6_v1_chr10_-_88533171_88533171	7.18578	Rfx3_Rfx1_Rfx4	ENSRNOT00000024321|Dnajc7|ENSRNOG00000017781|DnaJ heat shock protein family (Hsp40) member C7 [Source:RGD Symbol%3BAcc:1303226]
rn6_v1_chr10_-_61744976_61745097	7.17326	Rfx3_Rfx1_Rfx4	ENSRNOT00000079926|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]	ENSRNOT00000092314|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]	ENSRNOT00000034298|Sgsm2|ENSRNOG00000027194|small G protein signaling modulator 2 [Source:RGD Symbol%3BAcc:1306957]
rn6_v1_chrX_-_1714061_1714061	7.02709	Rfx3_Rfx1_Rfx4	ENSRNOT00000011592|Cdk16|ENSRNOG00000008578|cyclin-dependent kinase 16 [Source:RGD Symbol%3BAcc:620584]
rn6_v1_chr1_+_222198534_222198534	6.95633	Rfx3_Rfx1_Rfx4	ENSRNOT00000028712|Bad|ENSRNOG00000021147|BCL2-associated agonist of cell death [Source:RGD Symbol%3BAcc:620103]
rn6_v1_chr17_-_9791781_9791781	6.89643	Rfx3_Rfx1_Rfx4	ENSRNOT00000090536|Rgs14|ENSRNOG00000015616|regulator of G-protein signaling 14 [Source:RGD Symbol%3BAcc:620003]
rn6_v1_chr6_-_51356383_51356383	6.83718	Rfx3_Rfx1_Rfx4	ENSRNOT00000012415|Prkar2b|ENSRNOG00000009079|protein kinase cAMP-dependent type 2 regulatory subunit beta [Source:RGD Symbol%3BAcc:3394]
rn6_v1_chr11_+_61748883_61748883	6.74034	Rfx3_Rfx1_Rfx4	ENSRNOT00000093552|Qtrt2|ENSRNOG00000060729|queuine tRNA-ribosyltransferase accessory subunit 2 [Source:RGD Symbol%3BAcc:1310054]
rn6_v1_chr9_+_98621506_98621610	6.61615	Rfx3_Rfx1_Rfx4	ENSRNOT00000056612|Traf3ip1|ENSRNOG00000024468|TRAF3 interacting protein 1 [Source:RGD Symbol%3BAcc:1309252]	ENSRNOT00000081992|Traf3ip1|ENSRNOG00000024468|TRAF3 interacting protein 1 [Source:RGD Symbol%3BAcc:1309252]
rn6_v1_chr11_-_87434482_87434482	6.52832	Rfx3_Rfx1_Rfx4	ENSRNOT00000074346|Lrrc74b|ENSRNOG00000001872|leucine rich repeat containing 74B [Source:RGD Symbol%3BAcc:2319134]	ENSRNOT00000002557|Lrrc74b|ENSRNOG00000001872|leucine rich repeat containing 74B [Source:RGD Symbol%3BAcc:2319134]
rn6_v1_chr4_-_133127175_133127175	6.42411	Rfx3_Rfx1_Rfx4	ENSRNOT00000057758|Shq1|ENSRNOG00000005433|SHQ1%2C H/ACA ribonucleoprotein assembly factor [Source:RGD Symbol%3BAcc:1310610]
rn6_v1_chr11_-_71938165_71938165	6.40657	Rfx3_Rfx1_Rfx4	ENSRNOT00000037795|Cep19|ENSRNOG00000024924|centrosomal protein 19 [Source:RGD Symbol%3BAcc:621352]
rn6_v1_chr20_+_3552929_3552929	6.38763	Rfx3_Rfx1_Rfx4	ENSRNOT00000083223|Ddr1|ENSRNOG00000057125|discoidin domain receptor tyrosine kinase 1 [Source:RGD Symbol%3BAcc:2252]
rn6_v1_chr15_-_60056582_60056710	6.36461	Rfx3_Rfx1_Rfx4	ENSRNOT00000087569|Dnajc15|ENSRNOG00000009063|DnaJ heat shock protein family (Hsp40) member C15 [Source:RGD Symbol%3BAcc:1307154]	ENSRNOT00000012530|Dnajc15|ENSRNOG00000009063|DnaJ heat shock protein family (Hsp40) member C15 [Source:RGD Symbol%3BAcc:1307154]
rn6_v1_chr14_-_77492910_77492910	6.35437	Rfx3_Rfx1_Rfx4	ENSRNOT00000008410|Stx18|ENSRNOG00000006139|syntaxin 18 [Source:RGD Symbol%3BAcc:1310058]
rn6_v1_chr16_+_60925093_60925093	6.30338	Rfx3_Rfx1_Rfx4	ENSRNOT00000015813|Tnks|ENSRNOG00000011625|tankyrase [Source:RGD Symbol%3BAcc:1308784]
rn6_v1_chr17_-_9792007_9792007	6.19783	Rfx3_Rfx1_Rfx4	ENSRNOT00000021596|Rgs14|ENSRNOG00000015616|regulator of G-protein signaling 14 [Source:RGD Symbol%3BAcc:620003]
rn6_v1_chr20_-_5441706_5441706	6.10986	Rfx3_Rfx1_Rfx4	ENSRNOT00000000549|Vps52|ENSRNOG00000000470|VPS52 GARP complex subunit [Source:RGD Symbol%3BAcc:3618]
rn6_v1_chr10_-_31052102_31052102	6.1024	Rfx3_Rfx1_Rfx4	ENSRNOT00000007917|Thg1l|ENSRNOG00000005539|tRNA-histidine guanylyltransferase 1-like [Source:RGD Symbol%3BAcc:1359513]
rn6_v1_chr14_-_92117923_92117923	5.99732	Rfx3_Rfx1_Rfx4	ENSRNOT00000044726|Grb10|ENSRNOG00000004290|growth factor receptor bound protein 10 [Source:RGD Symbol%3BAcc:1566234]
rn6_v1_chr14_-_92577936_92577936	5.82684	Rfx3_Rfx1_Rfx4	ENSRNOT00000086154|Cobl|ENSRNOG00000004281|cordon-bleu WH2 repeat protein [Source:RGD Symbol%3BAcc:1312002]
rn6_v1_chr17_-_78910671_78910671	5.72841	Rfx3_Rfx1_Rfx4	ENSRNOT00000064609|Acbd7|ENSRNOG00000016480|acyl-CoA binding domain containing 7 [Source:RGD Symbol%3BAcc:1564164]
rn6_v1_chr20_+_13836030_13836030	5.69045	Rfx3_Rfx1_Rfx4	ENSRNOT00000093157|Cabin1|ENSRNOG00000001237|calcineurin binding protein 1 [Source:RGD Symbol%3BAcc:620263]	ENSRNOT00000001659|Cabin1|ENSRNOG00000001237|calcineurin binding protein 1 [Source:RGD Symbol%3BAcc:620263]
rn6_v1_chr20_+_3553455_3553455	5.52692	Rfx3_Rfx1_Rfx4	ENSRNOT00000090080|Ddr1|ENSRNOG00000057125|discoidin domain receptor tyrosine kinase 1 [Source:RGD Symbol%3BAcc:2252]
rn6_v1_chr5_+_147803735_147803735	5.50444	Rfx3_Rfx1_Rfx4	ENSRNOT00000074235|Tmem234|ENSRNOG00000049326|transmembrane protein 234 [Source:RGD Symbol%3BAcc:1583487]
rn6_v1_chr7_-_140640953_140640953	5.48631	Rfx3_Rfx1_Rfx4	ENSRNOT00000083156|Tuba1a|ENSRNOG00000060728|tubulin%2C alpha 1A [Source:RGD Symbol%3BAcc:619717]
rn6_v1_chr18_+_66741144_66741144	5.44091	Rfx3_Rfx1_Rfx4	ENSRNOT00000021161|AABR07032457.1|ENSRNOG00000015806|
rn6_v1_chr10_-_13352371_13352371	5.41272	Rfx3_Rfx1_Rfx4	ENSRNOT00000034340|Prss30|ENSRNOG00000033266|protease%2C serine%2C 30 [Source:RGD Symbol%3BAcc:735142]
rn6_v1_chr10_-_15311189_15311189	5.27345	Rfx3_Rfx1_Rfx4	ENSRNOT00000027371|Prr35|ENSRNOG00000020212|proline rich 35 [Source:RGD Symbol%3BAcc:1598335]
rn6_v1_chr1_-_157494008_157494008	5.25672	Rfx3_Rfx1_Rfx4	ENSRNOT00000013552|Pcf11|ENSRNOG00000009891|PCF11 cleavage and polyadenylation factor subunit [Source:RGD Symbol%3BAcc:1563397]
rn6_v1_chr2_+_187415262_187415262	5.22954	Rfx3_Rfx1_Rfx4	ENSRNOT00000056923|Gpatch4|ENSRNOG00000018969|G patch domain containing 4 [Source:RGD Symbol%3BAcc:1311086]
rn6_v1_chr1_+_78671121_78671121	5.22712	Rfx3_Rfx1_Rfx4	ENSRNOT00000021310|Ap2s1|ENSRNOG00000015865|adaptor-related protein complex 2%2C sigma 1 subunit [Source:RGD Symbol%3BAcc:620188]
rn6_v1_chr10_+_10808823_10808823	5.16855	Rfx3_Rfx1_Rfx4	ENSRNOT00000004298|Anks3|ENSRNOG00000003186|ankyrin repeat and sterile alpha motif domain containing 3 [Source:RGD Symbol%3BAcc:1305833]
rn6_v1_chr16_+_20336817_20336817	5.16667	Rfx3_Rfx1_Rfx4	ENSRNOT00000044291|Kcnn1|ENSRNOG00000029264|potassium calcium-activated channel subfamily N member 1 [Source:RGD Symbol%3BAcc:2962]
rn6_v1_chr20_+_3300247_3300247	5.10265	Rfx3_Rfx1_Rfx4	ENSRNOT00000035838|Prr3|ENSRNOG00000025806|proline rich 3 [Source:RGD Symbol%3BAcc:1303270]
rn6_v1_chr13_+_105684420_105684420	5.01143	Rfx3_Rfx1_Rfx4	ENSRNOT00000040543|Gpatch2|ENSRNOG00000002512|G patch domain containing 2 [Source:RGD Symbol%3BAcc:1308865]
rn6_v1_chr16_+_7082450_7082450	4.98554	Rfx3_Rfx1_Rfx4	ENSRNOT00000013291|Glt8d1|ENSRNOG00000018179|glycosyltransferase 8 domain containing 1 [Source:RGD Symbol%3BAcc:1359293]
rn6_v1_chr17_+_85364483_85364483	4.97748	Rfx3_Rfx1_Rfx4	ENSRNOT00000064257|Bmi1|ENSRNOG00000016585|BMI1 proto-oncogene%2C polycomb ring finger [Source:RGD Symbol%3BAcc:1307403]
rn6_v1_chr6_-_111015598_111015598	4.9385	Rfx3_Rfx1_Rfx4	ENSRNOT00000015046|Zdhhc22|ENSRNOG00000011285|zinc finger%2C DHHC-type containing 22 [Source:RGD Symbol%3BAcc:1308446]
rn6_v1_chr11_+_66078820_66078820	4.82584	Rfx3_Rfx1_Rfx4	ENSRNOT00000042864|Gtf2e1|ENSRNOG00000026008|general transcription factor IIE subunit 1 [Source:RGD Symbol%3BAcc:1306851]
rn6_v1_chr15_-_34314345_34314345	4.79726	Rfx3_Rfx1_Rfx4	ENSRNOT00000026552|Ipo4|ENSRNOG00000019553|importin 4 [Source:RGD Symbol%3BAcc:1305206]
rn6_v1_chr12_+_22727335_22727335	4.76426	Rfx3_Rfx1_Rfx4	ENSRNOT00000077293|Znhit1|ENSRNOG00000001418|zinc finger%2C HIT-type containing 1 [Source:RGD Symbol%3BAcc:2322870]
rn6_v1_chr1_+_79981355_79981355	4.73817	Rfx3_Rfx1_Rfx4	ENSRNOT00000020134|Dmwd|ENSRNOG00000014984|dystrophia myotonica%2C WD repeat containing [Source:RGD Symbol%3BAcc:1594179]
rn6_v1_chr8_+_117574161_117574161	4.70079	Rfx3_Rfx1_Rfx4	ENSRNOT00000077078|Ip6k2|ENSRNOG00000020361|inositol hexakisphosphate kinase 2 [Source:RGD Symbol%3BAcc:620529]
rn6_v1_chr10_-_11878792_11878792	4.67313	Rfx3_Rfx1_Rfx4	ENSRNOT00000064964|Cluap1|ENSRNOG00000007117|clusterin associated protein 1 [Source:RGD Symbol%3BAcc:1359189]
rn6_v1_chr4_-_99546488_99546488	4.47122	Rfx3_Rfx1_Rfx4	ENSRNOT00000045279|Kdm3a|ENSRNOG00000007814|lysine demethylase 3A [Source:RGD Symbol%3BAcc:708351]
rn6_v1_chr12_-_21450204_21450204	4.45506	Rfx3_Rfx1_Rfx4	ENSRNOT00000065866|LOC100910636|ENSRNOG00000050128|zinc finger CW-type PWWP domain protein 1-like [Source:RGD Symbol%3BAcc:6497217]
rn6_v1_chr3_-_133131192_133131192	4.35614	Rfx3_Rfx1_Rfx4	ENSRNOT00000055630|Tasp1|ENSRNOG00000004493|taspase 1 [Source:RGD Symbol%3BAcc:1308591]
rn6_v1_chr3_-_8751324_8751324	4.35532	Rfx3_Rfx1_Rfx4	ENSRNOT00000030623|LOC499770|ENSRNOG00000025711|similar to LOC495800 protein [Source:RGD Symbol%3BAcc:1563514]
rn6_v1_chr3_+_108944141_108944141	4.34455	Rfx3_Rfx1_Rfx4	ENSRNOT00000034950|Fam98b|ENSRNOG00000005366|family with sequence similarity 98%2C member B [Source:RGD Symbol%3BAcc:1564603]
rn6_v1_chr1_-_78626284_78626284	4.29333	Rfx3_Rfx1_Rfx4	ENSRNOT00000052299|LOC108349752|ENSRNOG00000028617|carcinoembryonic antigen-related cell adhesion molecule 3-like [Source:RGD Symbol%3BAcc:11382285]
rn6_v1_chr19_-_17115113_17115113	4.27297	Rfx3_Rfx1_Rfx4	ENSRNOT00000015718|Fto|ENSRNOG00000011728|FTO%2C alpha-ketoglutarate dependent dioxygenase [Source:RGD Symbol%3BAcc:1305121]
rn6_v1_chr14_-_7863664_7863664	4.17194	Rfx3_Rfx1_Rfx4	ENSRNOT00000061162|Ptpn13|ENSRNOG00000002061|protein tyrosine phosphatase%2C non-receptor type 13 [Source:RGD Symbol%3BAcc:1563360]
rn6_v1_chrX_-_15461713_15461713	4.07684	Rfx3_Rfx1_Rfx4	ENSRNOT00000063952|Slc35a2|ENSRNOG00000024801|solute carrier family 35 member A2 [Source:RGD Symbol%3BAcc:2293497]
rn6_v1_chr6_+_36941233_36941233	4.06214	Rfx3_Rfx1_Rfx4	ENSRNOT00000007073|Smc6|ENSRNOG00000004908|structural maintenance of chromosomes 6 [Source:RGD Symbol%3BAcc:1311214]
rn6_v1_chr2_+_189413966_189413966	4.04011	Rfx3_Rfx1_Rfx4	ENSRNOT00000056603|RGD1564171|ENSRNOG00000037406|RGD1564171 [Source:RGD Symbol%3BAcc:1564171]
rn6_v1_chr6_+_54488038_54488075	4.01021	Rfx3_Rfx1_Rfx4	ENSRNOT00000084661|Snx13|ENSRNOG00000004186|sorting nexin 13 [Source:RGD Symbol%3BAcc:1309778]	ENSRNOT00000005637|Snx13|ENSRNOG00000004186|sorting nexin 13 [Source:RGD Symbol%3BAcc:1309778]
rn6_v1_chr5_-_50068706_50068706	3.92909	Rfx3_Rfx1_Rfx4	ENSRNOT00000084643|Orc3|ENSRNOG00000008314|origin recognition complex%2C subunit 3 [Source:RGD Symbol%3BAcc:1308457]
rn6_v1_chr10_+_61626597_61626597	3.88276	Rfx3_Rfx1_Rfx4	ENSRNOT00000003750|Mettl16|ENSRNOG00000002764|methyltransferase like 16 [Source:RGD Symbol%3BAcc:1593242]
rn6_v1_chr5_+_19471664_19471664	3.86527	Rfx3_Rfx1_Rfx4	ENSRNOT00000013563|Sdcbp|ENSRNOG00000009683|syndecan binding protein [Source:RGD Symbol%3BAcc:621497]
rn6_v1_chr11_+_87522971_87522971	3.83149	Rfx3_Rfx1_Rfx4	ENSRNOT00000043545|Smpd4|ENSRNOG00000001875|sphingomyelin phosphodiesterase 4 [Source:RGD Symbol%3BAcc:1310674]
rn6_v1_chr1_-_197997664_197997664	3.82742	Rfx3_Rfx1_Rfx4	ENSRNOT00000025898|Cln3|ENSRNOG00000019103|ceroid-lipofuscinosis%2C neuronal 3 [Source:RGD Symbol%3BAcc:1359537]
rn6_v1_chr5_+_171262278_171262278	3.6501	Rfx3_Rfx1_Rfx4	ENSRNOT00000031138|Cep104|ENSRNOG00000025000|centrosomal protein 104 [Source:RGD Symbol%3BAcc:708505]
rn6_v1_chr1_-_281376834_281376834	3.40153	Rfx3_Rfx1_Rfx4	ENSRNOT00000013031|Fam204a|ENSRNOG00000009830|family with sequence similarity 204%2C member A [Source:RGD Symbol%3BAcc:1305500]
rn6_v1_chr4_-_123118186_123118186	3.36669	Rfx3_Rfx1_Rfx4	ENSRNOT00000038096|LOC100361898|ENSRNOG00000022466|coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:RGD Symbol%3BAcc:2319280]
rn6_v1_chr12_-_2007516_2007516	3.34486	Rfx3_Rfx1_Rfx4	ENSRNOT00000037564|Pex11g|ENSRNOG00000028100|peroxisomal biogenesis factor 11 gamma [Source:RGD Symbol%3BAcc:1307070]
rn6_v1_chr16_-_19308842_19308842	3.28114	Rfx3_Rfx1_Rfx4	ENSRNOT00000019556|Fam32a|ENSRNOG00000039528|family with sequence similarity 32%2C member A [Source:RGD Symbol%3BAcc:1561287]
rn6_v1_chr19_+_33130303_33130303	3.12024	Rfx3_Rfx1_Rfx4	ENSRNOT00000048673|LOC102550668|ENSRNOG00000033487|60S ribosomal protein L21-like [Source:RGD Symbol%3BAcc:7700714]
rn6_v1_chrX_-_29825439_29825439	3.07719	Rfx3_Rfx1_Rfx4	ENSRNOT00000048155|Gemin8|ENSRNOG00000029038|gem (nuclear organelle) associated protein 8 [Source:RGD Symbol%3BAcc:1359160]
rn6_v1_chrX_+_156227830_156227830	2.94698	Rfx3_Rfx1_Rfx4	ENSRNOT00000083949|LOC690348|ENSRNOG00000060839|similar to ESO3 protein [Source:RGD Symbol%3BAcc:1597340]
rn6_v1_chr14_+_113530470_113530470	2.8736	Rfx3_Rfx1_Rfx4	ENSRNOT00000004919|Pnpt1|ENSRNOG00000003600|polyribonucleotide nucleotidyltransferase 1 [Source:RGD Symbol%3BAcc:1307987]
rn6_v1_chr19_-_56010004_56010004	2.80082	Rfx3_Rfx1_Rfx4	ENSRNOT00000021483|Chmp1a|ENSRNOG00000016001|charged multivesicular body protein 1A [Source:RGD Symbol%3BAcc:1311083]
rn6_v1_chr20_+_5262946_5262946	2.72451	Rfx3_Rfx1_Rfx4	ENSRNOT00000082900|Brd2|ENSRNOG00000000461|bromodomain containing 2 [Source:RGD Symbol%3BAcc:1303324]
rn6_v1_chr5_-_155143539_155143539	2.65583	Rfx3_Rfx1_Rfx4	ENSRNOT00000016983|Ephb2|ENSRNOG00000012531|Eph receptor B2 [Source:RGD Symbol%3BAcc:1564232]
rn6_v1_chr5_-_78267063_78267063	2.59278	Rfx3_Rfx1_Rfx4	ENSRNOT00000040894|Cdc26|ENSRNOG00000029785|cell division cycle 26 [Source:RGD Symbol%3BAcc:1311342]	ENSRNOT00000087648|Cdc26|ENSRNOG00000029785|cell division cycle 26 [Source:RGD Symbol%3BAcc:1311342]
rn6_v1_chr12_+_38274297_38274349	2.56953	Rfx3_Rfx1_Rfx4	ENSRNOT00000087905|Rsrc2|ENSRNOG00000001238|arginine and serine rich coiled-coil 2 [Source:RGD Symbol%3BAcc:1564882]	ENSRNOT00000057788|Rsrc2|ENSRNOG00000001238|arginine and serine rich coiled-coil 2 [Source:RGD Symbol%3BAcc:1564882]
rn6_v1_chr2_+_39434634_39434657	2.53715	Rfx3_Rfx1_Rfx4	ENSRNOT00000013598|Ercc8|ENSRNOG00000009968|ERCC excision repair 8%2C CSA ubiquitin ligase complex subunit [Source:RGD Symbol%3BAcc:1311570]	ENSRNOT00000077938|Ercc8|ENSRNOG00000009968|ERCC excision repair 8%2C CSA ubiquitin ligase complex subunit [Source:RGD Symbol%3BAcc:1311570]
rn6_v1_chr1_-_142720257_142720257	2.43783	Rfx3_Rfx1_Rfx4	ENSRNOT00000032294|Wdr73|ENSRNOG00000010664|WD repeat domain 73 [Source:RGD Symbol%3BAcc:1306429]
rn6_v1_chr10_+_103956019_103956019	2.36733	Rfx3_Rfx1_Rfx4	ENSRNOT00000045875|Mrpl58|ENSRNOG00000032780|mitochondrial ribosomal protein L58 [Source:RGD Symbol%3BAcc:1307942]
rn6_v1_chr1_+_91042635_91042635	2.18343	Rfx3_Rfx1_Rfx4	ENSRNOT00000028211|LOC103690005|ENSRNOG00000020781|tubulin-folding cofactor B [Source:RGD Symbol%3BAcc:9365423]
rn6_v1_chr2_-_189333015_189333015	2.15946	Rfx3_Rfx1_Rfx4	ENSRNOT00000076424|Hax1|ENSRNOG00000045647|HCLS1 associated protein X-1 [Source:RGD Symbol%3BAcc:727960]	ENSRNOT00000076952|Hax1|ENSRNOG00000045647|HCLS1 associated protein X-1 [Source:RGD Symbol%3BAcc:727960]
rn6_v1_chr11_+_83048636_83048636	2.10573	Rfx3_Rfx1_Rfx4	ENSRNOT00000002408|RGD1562339|ENSRNOG00000001767|RGD1562339 [Source:RGD Symbol%3BAcc:1562339]
rn6_v1_chr7_-_30274984_30274984	1.97949	Rfx3_Rfx1_Rfx4	ENSRNOT00000092527|Slc17a8|ENSRNOG00000007581|solute carrier family 17 member 8 [Source:RGD Symbol%3BAcc:628870]	ENSRNOT00000010207|Slc17a8|ENSRNOG00000007581|solute carrier family 17 member 8 [Source:RGD Symbol%3BAcc:628870]
rn6_v1_chr10_+_75149814_75149814	1.85844	Rfx3_Rfx1_Rfx4	ENSRNOT00000011500|Mks1|ENSRNOG00000008635|Meckel syndrome%2C type 1 [Source:RGD Symbol%3BAcc:1565186]
rn6_v1_chr19_-_27464805_27464805	1.81288	Rfx3_Rfx1_Rfx4	ENSRNOT00000039467|Orc6|ENSRNOG00000024043|origin recognition complex%2C subunit 6 [Source:RGD Symbol%3BAcc:1311437]
rn6_v1_chr4_-_140503412_140503412	1.78114	Rfx3_Rfx1_Rfx4	ENSRNOT00000079266|AABR07061707.1|ENSRNOG00000052718|
rn6_v1_chr3_+_91870208_91870208	1.77422	Rfx3_Rfx1_Rfx4	ENSRNOT00000040249|Rpl21|ENSRNOG00000049848|ribosomal protein L21 [Source:RGD Symbol%3BAcc:68390]
rn6_v1_chr12_-_21973474_21973474	1.77168	Rfx3_Rfx1_Rfx4	ENSRNOT00000071110|RGD1566138|ENSRNOG00000052199|similar to Zinc finger%2C CW type with PWWP domain 1 [Source:RGD Symbol%3BAcc:1566138]
rn6_v1_chr3_+_111097326_111097326	1.67206	Rfx3_Rfx1_Rfx4	ENSRNOT00000018717|Vps18|ENSRNOG00000013689|VPS18 CORVET/HOPS core subunit [Source:RGD Symbol%3BAcc:1311556]
rn6_v1_chr4_+_594882_594882	1.50574	Rfx3_Rfx1_Rfx4	ENSRNOT00000033377|Rbm33|ENSRNOG00000006718|RNA binding motif protein 33 [Source:RGD Symbol%3BAcc:1310651]
rn6_v1_chr1_-_167765552_167765552	1.49616	Rfx3_Rfx1_Rfx4	ENSRNOT00000024954|Bcl2l1-ps1|ENSRNOG00000018503|Bcl2-like 1%2C pseudogene 1 [Source:RGD Symbol%3BAcc:1593913]
rn6_v1_chr6_-_86713370_86713370	1.48417	Rfx3_Rfx1_Rfx4	ENSRNOT00000005821|Klhl28|ENSRNOG00000004218|kelch-like family member 28 [Source:RGD Symbol%3BAcc:1311326]
rn6_v1_chr13_-_73056765_73056765	1.40038	Rfx3_Rfx1_Rfx4	ENSRNOT00000000049|Xpr1|ENSRNOG00000000042|xenotropic and polytropic retrovirus receptor 1 [Source:RGD Symbol%3BAcc:1306554]
rn6_v1_chr4_+_181103774_181103774	1.35547	Rfx3_Rfx1_Rfx4	ENSRNOT00000084207|Arntl2|ENSRNOG00000001830|aryl hydrocarbon receptor nuclear translocator-like 2 [Source:RGD Symbol%3BAcc:620230]	ENSRNOT00000055473|Arntl2|ENSRNOG00000001830|aryl hydrocarbon receptor nuclear translocator-like 2 [Source:RGD Symbol%3BAcc:620230]	ENSRNOT00000077619|Arntl2|ENSRNOG00000001830|aryl hydrocarbon receptor nuclear translocator-like 2 [Source:RGD Symbol%3BAcc:620230]
rn6_v1_chr2_-_187820952_187820952	1.25036	Rfx3_Rfx1_Rfx4	ENSRNOT00000092762|Sema4a|ENSRNOG00000019737|semaphorin 4A [Source:RGD Symbol%3BAcc:1304636]
rn6_v1_chr2_+_250995517_250995517	1.18389	Rfx3_Rfx1_Rfx4	ENSRNOT00000018905|Odf2l|ENSRNOG00000014059|outer dense fiber of sperm tails 2-like [Source:RGD Symbol%3BAcc:1593831]
rn6_v1_chr4_+_173115125_173115125	1.16505	Rfx3_Rfx1_Rfx4	ENSRNOT00000074673|LOC100910575|ENSRNOG00000048985|serine-threonine kinase receptor-associated protein-like [Source:RGD Symbol%3BAcc:6498120]
rn6_v1_chr11_-_66819079_66819079	1.06148	Rfx3_Rfx1_Rfx4	ENSRNOT00000003255|Golgb1|ENSRNOG00000030314|golgin B1 [Source:RGD Symbol%3BAcc:708429]
rn6_v1_chrX_+_40286592_40286592	1.02276	Rfx3_Rfx1_Rfx4	ENSRNOT00000087898|Mbtps2|ENSRNOG00000007644|membrane-bound transcription factor peptidase%2C site 2 [Source:RGD Symbol%3BAcc:1566171]
rn6_v1_chr3_+_160467552_160467552	0.983021	Rfx3_Rfx1_Rfx4	ENSRNOT00000066657|Stk4|ENSRNOG00000013529|serine/threonine kinase 4 [Source:RGD Symbol%3BAcc:1312035]
rn6_v1_chr2_-_210873024_210873024	0.973731	Rfx3_Rfx1_Rfx4	ENSRNOT00000026051|Ampd2|ENSRNOG00000019240|adenosine monophosphate deaminase 2 [Source:RGD Symbol%3BAcc:2110]
rn6_v1_chr9_-_17163170_17163170	0.925623	Rfx3_Rfx1_Rfx4	ENSRNOT00000025921|Xpo5|ENSRNOG00000019085|exportin 5 [Source:RGD Symbol%3BAcc:1311522]
rn6_v1_chr6_+_108076306_108076306	0.80926	Rfx3_Rfx1_Rfx4	ENSRNOT00000014913|Coq6|ENSRNOG00000011164|coenzyme Q6 monooxygenase [Source:RGD Symbol%3BAcc:1311149]
rn6_v1_chr11_+_61662270_61662270	0.778843	Rfx3_Rfx1_Rfx4	ENSRNOT00000079521|Zdhhc23|ENSRNOG00000060348|zinc finger%2C DHHC-type containing 23 [Source:RGD Symbol%3BAcc:1303254]
rn6_v1_chr9_-_81467760_81467760	0.756888	Rfx3_Rfx1_Rfx4	ENSRNOT00000090868|Cxcr1|ENSRNOG00000048239|C-X-C motif chemokine receptor 1 [Source:RGD Symbol%3BAcc:2905]
rn6_v1_chr20_-_45005035_45005035	0.720953	Rfx3_Rfx1_Rfx4	ENSRNOT00000035047|Mfsd4b|ENSRNOG00000024543|major facilitator superfamily domain containing 4B [Source:RGD Symbol%3BAcc:1559971]
rn6_v1_chr2_+_209358760_209358760	0.666937	Rfx3_Rfx1_Rfx4	ENSRNOT00000082631|Lrif1|ENSRNOG00000017784|ligand dependent nuclear receptor interacting factor 1 [Source:RGD Symbol%3BAcc:1306520]
rn6_v1_chr8_-_94922017_94922017	0.501394	Rfx3_Rfx1_Rfx4	ENSRNOT00000083934|Cep162|ENSRNOG00000010608|centrosomal protein 162 [Source:RGD Symbol%3BAcc:1307365]
rn6_v1_chr4_+_78080310_78080310	0.374835	Rfx3_Rfx1_Rfx4	ENSRNOT00000035906|Sspo|ENSRNOG00000025848|SCO-spondin [Source:RGD Symbol%3BAcc:1549716]
rn6_v1_chr10_-_103873246_103873246	0.362582	Rfx3_Rfx1_Rfx4	ENSRNOT00000039387|Ush1g|ENSRNOG00000028456|Usher syndrome 1G [Source:RGD Symbol%3BAcc:1304551]
rn6_v1_chr10_-_46206135_46206135	0.305246	Rfx3_Rfx1_Rfx4	ENSRNOT00000091471|Cops3|ENSRNOG00000053943|COP9 signalosome subunit 3 [Source:RGD Symbol%3BAcc:1303002]
rn6_v1_chr9_+_100076958_100076958	0.233024	Rfx3_Rfx1_Rfx4	ENSRNOT00000084297|Dusp28|ENSRNOG00000057389|dual specificity phosphatase 28 [Source:RGD Symbol%3BAcc:1595220]
rn6_v1_chr6_+_109617596_109617643	0.199189	Rfx3_Rfx1_Rfx4	ENSRNOT00000085031|Flvcr2|ENSRNOG00000008754|feline leukemia virus subgroup C cellular receptor family%2C member 2 [Source:RGD Symbol%3BAcc:735098]	ENSRNOT00000089972|Flvcr2|ENSRNOG00000008754|feline leukemia virus subgroup C cellular receptor family%2C member 2 [Source:RGD Symbol%3BAcc:735098]	ENSRNOT00000082402|Flvcr2|ENSRNOG00000008754|feline leukemia virus subgroup C cellular receptor family%2C member 2 [Source:RGD Symbol%3BAcc:735098]
rn6_v1_chrX_-_2116656_2116656	0.163792	Rfx3_Rfx1_Rfx4	ENSRNOT00000081913|Rp2|ENSRNOG00000025428|retinitis pigmentosa 2 (X-linked recessive) [Source:RGD Symbol%3BAcc:1565124]
rn6_v1_chrX_-_105417323_105417323	0.106187	Rfx3_Rfx1_Rfx4	ENSRNOT00000015494|Gla|ENSRNOG00000011513|galactosidase%2C alpha [Source:RGD Symbol%3BAcc:1589721]
rn6_v1_chr1_-_207811008_207811008	0.0834059	Rfx3_Rfx1_Rfx4	ENSRNOT00000080506|Clrn3|ENSRNOG00000028288|clarin 3 [Source:RGD Symbol%3BAcc:1305043]
rn6_v1_chr1_+_218532045_218532045	0.0785515	Rfx3_Rfx1_Rfx4	ENSRNOT00000018848|Mrpl21|ENSRNOG00000013845|mitochondrial ribosomal protein L21 [Source:RGD Symbol%3BAcc:1310203]
