rn6_v1_chr3_+_56862691_56862691	39.5908	Smad4	ENSRNOT00000087712|Gad1|ENSRNOG00000000007|glutamate decarboxylase 1 [Source:RGD Symbol%3BAcc:2652]
rn6_v1_chr16_-_39476384_39476384	28.6432	Smad4	ENSRNOT00000092968|Gpm6a|ENSRNOG00000010731|glycoprotein m6a [Source:RGD Symbol%3BAcc:631368]
rn6_v1_chr13_-_91872954_91873096	27.8014	Smad4	ENSRNOT00000004613|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]	ENSRNOT00000079263|Cadm3|ENSRNOG00000003365|cell adhesion molecule 3 [Source:RGD Symbol%3BAcc:1307035]
rn6_v1_chr10_-_45297385_45297385	26.5453	Smad4	ENSRNOT00000041187|Hist3h2bb|ENSRNOG00000031790|histone cluster 3 H2B family member b [Source:RGD Symbol%3BAcc:1583885]
rn6_v1_chr10_-_107539658_107539658	25.7242	Smad4	ENSRNOT00000089346|Rbfox3|ENSRNOG00000003386|RNA binding protein%2C fox-1 homolog 3 [Source:RGD Symbol%3BAcc:1560070]
rn6_v1_chr1_+_196996581_196996581	25.6439	Smad4	ENSRNOT00000021690|Il21r|ENSRNOG00000015773|interleukin 21 receptor [Source:RGD Symbol%3BAcc:1304950]
rn6_v1_chr2_+_209839299_209839299	25.5642	Smad4	ENSRNOT00000092450|Kcna2|ENSRNOG00000018285|potassium voltage-gated channel subfamily A member 2 [Source:RGD Symbol%3BAcc:2950]
rn6_v1_chr2_+_209838869_209838869	25.5106	Smad4	ENSRNOT00000092365|Kcna2|ENSRNOG00000018285|potassium voltage-gated channel subfamily A member 2 [Source:RGD Symbol%3BAcc:2950]
rn6_v1_chr16_-_39476025_39476025	25.1605	Smad4	ENSRNOT00000014312|Gpm6a|ENSRNOG00000010731|glycoprotein m6a [Source:RGD Symbol%3BAcc:631368]
rn6_v1_chr10_-_107539465_107539465	25.1119	Smad4	ENSRNOT00000004524|Rbfox3|ENSRNOG00000003386|RNA binding protein%2C fox-1 homolog 3 [Source:RGD Symbol%3BAcc:1560070]
rn6_v1_chr17_-_43770561_43770561	22.6225	Smad4	ENSRNOT00000088408|RGD1562378|ENSRNOG00000051891|histone H4 variant H4-v.1 [Source:RGD Symbol%3BAcc:1562378]
rn6_v1_chr8_+_58347736_58347757	21.4861	Smad4	ENSRNOT00000080227|Slc35f2|ENSRNOG00000009014|solute carrier family 35%2C member F2 [Source:RGD Symbol%3BAcc:1311242]	ENSRNOT00000066222|Slc35f2|ENSRNOG00000009014|solute carrier family 35%2C member F2 [Source:RGD Symbol%3BAcc:1311242]
rn6_v1_chr1_+_100299626_100299635	21.2715	Smad4	ENSRNOT00000092327|Shank1|ENSRNOG00000019207|SH3 and multiple ankyrin repeat domains 1 [Source:RGD Symbol%3BAcc:621011]	ENSRNOT00000044257|Shank1|ENSRNOG00000019207|SH3 and multiple ankyrin repeat domains 1 [Source:RGD Symbol%3BAcc:621011]
rn6_v1_chr8_-_98738446_98738446	21.2538	Smad4	ENSRNOT00000019860|Zic1|ENSRNOG00000014644|Zic family member 1 [Source:RGD Symbol%3BAcc:620110]
rn6_v1_chr4_+_153774486_153774486	20.6271	Smad4	ENSRNOT00000074096|Tuba8|ENSRNOG00000048169|tubulin%2C alpha 8 [Source:RGD Symbol%3BAcc:1566041]
rn6_v1_chr1_+_78800754_78800754	20.5548	Smad4	ENSRNOT00000084601|Dact3|ENSRNOG00000052256|dishevelled-binding antagonist of beta-catenin 3 [Source:RGD Symbol%3BAcc:1563892]
rn6_v1_chr17_-_44744902_44744902	17.4116	Smad4	ENSRNOT00000085381|RGD1562378|ENSRNOG00000058444|histone H4 variant H4-v.1 [Source:RGD Symbol%3BAcc:1562378]
rn6_v1_chr10_-_94352880_94352880	17.28	Smad4	ENSRNOT00000035973|Limd2|ENSRNOG00000025448|LIM domain containing 2 [Source:RGD Symbol%3BAcc:1309967]
rn6_v1_chr9_+_117583610_117583620	17.0607	Smad4	ENSRNOT00000088647|Epb41l3|ENSRNOG00000016724|erythrocyte membrane protein band 4.1-like 3 [Source:RGD Symbol%3BAcc:71089]	ENSRNOT00000049426|Epb41l3|ENSRNOG00000016724|erythrocyte membrane protein band 4.1-like 3 [Source:RGD Symbol%3BAcc:71089]
rn6_v1_chr7_-_120403523_120403523	16.6933	Smad4	ENSRNOT00000015283|Sox10|ENSRNOG00000011305|SRY box 10 [Source:RGD Symbol%3BAcc:3735]
rn6_v1_chr17_+_44520537_44520537	16.301	Smad4	ENSRNOT00000077985|hist1h2ail2|ENSRNOG00000056411|histone cluster 1%2C H2ai-like2 [Source:RGD Symbol%3BAcc:1562827]
rn6_v1_chr7_-_70842405_70842405	16.1973	Smad4	ENSRNOT00000047449|Nxph4|ENSRNOG00000025059|neurexophilin 4 [Source:RGD Symbol%3BAcc:628723]
rn6_v1_chr9_+_2190915_2190915	15.8066	Smad4	ENSRNOT00000077417|Satb1|ENSRNOG00000012942|SATB homeobox 1 [Source:RGD Symbol%3BAcc:1305561]
rn6_v1_chr18_+_52215682_52215682	14.5468	Smad4	ENSRNOT00000037901|Megf10|ENSRNOG00000013674|multiple EGF-like domains 10 [Source:RGD Symbol%3BAcc:735084]
rn6_v1_chr8_-_50228369_50228369	14.3949	Smad4	ENSRNOT00000024030|Tagln|ENSRNOG00000017628|transgelin [Source:RGD Symbol%3BAcc:3723]
rn6_v1_chr13_-_70625842_70625842	13.8737	Smad4	ENSRNOT00000092499|Lamc2|ENSRNOG00000002667|laminin subunit gamma 2 [Source:RGD Symbol%3BAcc:621053]
rn6_v1_chr5_-_152473868_152473868	12.9766	Smad4	ENSRNOT00000022130|Fam110d|ENSRNOG00000016491|family with sequence similarity 110%2C member D [Source:RGD Symbol%3BAcc:1564994]
rn6_v1_chr17_-_43821536_43821536	12.5038	Smad4	ENSRNOT00000072286|RGD1562378|ENSRNOG00000050933|histone H4 variant H4-v.1 [Source:RGD Symbol%3BAcc:1562378]
rn6_v1_chr13_-_70626252_70626252	12.4701	Smad4	ENSRNOT00000036947|Lamc2|ENSRNOG00000002667|laminin subunit gamma 2 [Source:RGD Symbol%3BAcc:621053]
rn6_v1_chr17_-_44520240_44520240	12.3065	Smad4	ENSRNOT00000086538|Hist1h2bh|ENSRNOG00000058187|histone cluster 1 H2B family member h [Source:RGD Symbol%3BAcc:2325039]
rn6_v1_chr1_-_72727112_72727112	11.3824	Smad4	ENSRNOT00000031172|Brsk1|ENSRNOG00000017673|BR serine/threonine kinase 1 [Source:RGD Symbol%3BAcc:1563268]
rn6_v1_chr1_+_99486253_99486253	11.3245	Smad4	ENSRNOT00000074820|LOC102546648|ENSRNOG00000023233|uncharacterized LOC102546648 [Source:RGD Symbol%3BAcc:7541917]
rn6_v1_chr7_+_119647375_119647375	11.0679	Smad4	ENSRNOT00000046563|Kctd17|ENSRNOG00000000231|potassium channel tetramerization domain containing 17 [Source:RGD Symbol%3BAcc:1311154]
rn6_v1_chr7_+_123168811_123168811	10.2032	Smad4	ENSRNOT00000007091|Csdc2|ENSRNOG00000005332|cold shock domain containing C2 [Source:RGD Symbol%3BAcc:628780]
rn6_v1_chr12_+_21767606_21767606	10.067	Smad4	ENSRNOT00000059602|LOC103691013|ENSRNOG00000050511|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1-like [Source:RGD Symbol%3BAcc:9219688]
rn6_v1_chr14_-_34561696_34561696	9.78627	Smad4	ENSRNOT00000059763|Srd5a3|ENSRNOG00000002216|steroid 5 alpha-reductase 3 [Source:RGD Symbol%3BAcc:1308828]
rn6_v1_chr13_+_57131395_57131395	9.65842	Smad4	ENSRNOT00000017884|Kcnt2|ENSRNOG00000013312|potassium sodium-activated channel subfamily T member 2 [Source:RGD Symbol%3BAcc:735074]
rn6_v1_chr16_+_61758917_61758917	8.82031	Smad4	ENSRNOT00000084858|Leprotl1|ENSRNOG00000012601|leptin receptor overlapping transcript-like 1 [Source:RGD Symbol%3BAcc:1307168]
rn6_v1_chrX_+_106823491_106823491	8.76882	Smad4	ENSRNOT00000045997|Bex3|ENSRNOG00000028822|brain expressed X-linked 3 [Source:RGD Symbol%3BAcc:3148]
rn6_v1_chr15_+_4240203_4240203	8.59232	Smad4	ENSRNOT00000010178|Mss51|ENSRNOG00000007632|MSS51 mitochondrial translational activator [Source:RGD Symbol%3BAcc:1309408]
rn6_v1_chr13_+_48287873_48287873	8.50569	Smad4	ENSRNOT00000068223|Fam72a|ENSRNOG00000042747|family with sequence similarity 72%2C member A [Source:RGD Symbol%3BAcc:1598023]
rn6_v1_chr4_+_102351036_102351036	8.47733	Smad4	ENSRNOT00000079277|AABR07060994.1|ENSRNOG00000060746|
rn6_v1_chr4_-_170145262_170145262	8.38624	Smad4	ENSRNOT00000074526|Hist1h4b|ENSRNOG00000045978|histone cluster 1%2C H4b [Source:RGD Symbol%3BAcc:620814]
rn6_v1_chr2_+_241909832_241909832	7.82324	Smad4	ENSRNOT00000047975|Ppp3ca|ENSRNOG00000009882|protein phosphatase 3 catalytic subunit alpha [Source:RGD Symbol%3BAcc:3382]
rn6_v1_chrX_+_96991658_96991658	7.79941	Smad4	ENSRNOT00000049969|AABR07040288.1|ENSRNOG00000047560|
rn6_v1_chr2_-_187822997_187822997	7.78403	Smad4	ENSRNOT00000092932|Sema4a|ENSRNOG00000019737|semaphorin 4A [Source:RGD Symbol%3BAcc:1304636]
rn6_v1_chr10_-_90240509_90240509	7.60744	Smad4	ENSRNOT00000028407|Atxn7l3|ENSRNOG00000020930|ataxin 7-like 3 [Source:RGD Symbol%3BAcc:1311493]
rn6_v1_chr17_-_9695292_9695292	7.27614	Smad4	ENSRNOT00000036162|Prr7|ENSRNOG00000021447|proline rich 7 (synaptic) [Source:RGD Symbol%3BAcc:1561898]
rn6_v1_chr7_-_14418950_14418950	7.01404	Smad4	ENSRNOT00000066722|Rasal3|ENSRNOG00000006167|RAS protein activator like 3 [Source:RGD Symbol%3BAcc:1309019]
rn6_v1_chr1_+_79989019_79989019	6.85267	Smad4	ENSRNOT00000020428|Dmpk|ENSRNOG00000015085|dystrophia myotonica-protein kinase [Source:RGD Symbol%3BAcc:1309825]
rn6_v1_chr8_-_115358046_115358046	6.81329	Smad4	ENSRNOT00000017607|Grm2|ENSRNOG00000013171|glutamate metabotropic receptor 2 [Source:RGD Symbol%3BAcc:2743]
rn6_v1_chr4_-_103369224_103369224	6.75096	Smad4	ENSRNOT00000075709|AABR07061057.1|ENSRNOG00000049049|
rn6_v1_chr10_+_47765432_47765432	6.63049	Smad4	ENSRNOT00000078231|LOC102553715|ENSRNOG00000002382|microfibril-associated glycoprotein 4-like [Source:RGD Symbol%3BAcc:7719175]
rn6_v1_chrX_+_107370431_107370431	5.4675	Smad4	ENSRNOT00000044372|Tceal1|ENSRNOG00000002387|transcription elongation factor A like 1 [Source:RGD Symbol%3BAcc:1549724]
rn6_v1_chr13_-_94355219_94355219	5.29397	Smad4	ENSRNOT00000005332|Pld5|ENSRNOG00000003997|phospholipase D family%2C member 5 [Source:RGD Symbol%3BAcc:1562609]
rn6_v1_chr15_+_23792931_23792931	5.23538	Smad4	ENSRNOT00000092091|Samd4a|ENSRNOG00000010489|sterile alpha motif domain containing 4A [Source:RGD Symbol%3BAcc:1310361]
rn6_v1_chr1_-_101514547_101514547	4.98581	Smad4	ENSRNOT00000079633|Ppp1r15a|ENSRNOG00000020938|protein phosphatase 1%2C regulatory subunit 15A [Source:RGD Symbol%3BAcc:621526]
rn6_v1_chr15_-_29852665_29852665	4.98515	Smad4	ENSRNOT00000040046|AABR07017662.3|ENSRNOG00000052843|
rn6_v1_chr2_+_198360998_198360998	4.91984	Smad4	ENSRNOT00000046129|Hist2h2be|ENSRNOG00000045753|histone cluster 2%2C H2be [Source:RGD Symbol%3BAcc:1562346]
rn6_v1_chr10_+_68588789_68588789	4.89285	Smad4	ENSRNOT00000049614|AABR07030122.1|ENSRNOG00000030217|
rn6_v1_chr17_+_78739389_78739389	4.78912	Smad4	ENSRNOT00000020384|LOC102547897|ENSRNOG00000015196|uncharacterized LOC102547897 [Source:RGD Symbol%3BAcc:7640129]
rn6_v1_chr2_+_203768729_203768729	4.77787	Smad4	ENSRNOT00000018895|Igsf3|ENSRNOG00000023851|immunoglobulin superfamily%2C member 3 [Source:RGD Symbol%3BAcc:1307796]
rn6_v1_chr4_-_82209933_82209933	4.54368	Smad4	ENSRNOT00000091106|LOC100912608|ENSRNOG00000050252|homeobox protein Hox-A10-like [Source:RGD Symbol%3BAcc:6485971]
rn6_v1_chr4_-_82295470_82295470	4.48251	Smad4	ENSRNOT00000091073|Hoxa10|ENSRNOG00000057650|homeobox A10 [Source:RGD Symbol%3BAcc:9410935]
rn6_v1_chr4_+_84194347_84194347	4.38024	Smad4	ENSRNOT00000084256|Chn2|ENSRNOG00000009411|chimerin 2 [Source:RGD Symbol%3BAcc:620140]
rn6_v1_chr14_-_35149608_35149610	3.84898	Smad4	ENSRNOT00000003050|Kit|ENSRNOG00000002227|KIT proto-oncogene receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620568]	ENSRNOT00000090654|Kit|ENSRNOG00000002227|KIT proto-oncogene receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620568]
rn6_v1_chr2_-_5577369_5577369	3.70898	Smad4	ENSRNOT00000093420|Nr2f1|ENSRNOG00000014795|nuclear receptor subfamily 2%2C group F%2C member 1 [Source:RGD Symbol%3BAcc:621682]
rn6_v1_chr10_-_88670430_88670430	3.58321	Smad4	ENSRNOT00000025547|Hcrt|ENSRNOG00000018892|hypocretin neuropeptide precursor [Source:RGD Symbol%3BAcc:2786]
rn6_v1_chr6_+_108745895_108745895	3.25813	Smad4	ENSRNOT00000061786|LOC108348062|ENSRNOG00000040153|eukaryotic translation initiation factor 3 subunit H [Source:RGD Symbol%3BAcc:11498408]
rn6_v1_chr12_+_37668369_37668369	3.14991	Smad4	ENSRNOT00000001419|Cdk2ap1|ENSRNOG00000001070|cyclin-dependent kinase 2 associated protein 1 [Source:RGD Symbol%3BAcc:1308664]
rn6_v1_chr17_+_23135985_23135985	2.12444	Smad4	ENSRNOT00000090794|Nedd9|ENSRNOG00000014548|neural precursor cell expressed%2C developmentally down-regulated 9 [Source:RGD Symbol%3BAcc:1306276]
rn6_v1_chr5_-_152464850_152464850	2.04562	Smad4	ENSRNOT00000021937|Zfp593|ENSRNOG00000016392|zinc finger protein 593 [Source:RGD Symbol%3BAcc:1310179]
rn6_v1_chr15_-_29865536_29865536	2.01177	Smad4	ENSRNOT00000085893|AABR07017658.1|ENSRNOG00000046197|
rn6_v1_chr1_-_168587241_168587241	1.83257	Smad4	ENSRNOT00000021254|Olr104|ENSRNOG00000015876|olfactory receptor 104 [Source:RGD Symbol%3BAcc:1333997]
rn6_v1_chr8_+_36766977_36766977	1.5522	Smad4	ENSRNOT00000017648|Pus3|ENSRNOG00000012994|pseudouridylate synthase 3 [Source:RGD Symbol%3BAcc:1310757]
rn6_v1_chr10_+_46940965_46940965	1.50998	Smad4	ENSRNOT00000005366|Llgl1|ENSRNOG00000003948|LLGL1%2C scribble cell polarity complex component [Source:RGD Symbol%3BAcc:3012]
rn6_v1_chr7_-_143217535_143217535	1.39254	Smad4	ENSRNOT00000088316|Kb15|ENSRNOG00000009105|type II keratin Kb15 [Source:RGD Symbol%3BAcc:1565564]
rn6_v1_chr12_-_41671437_41671437	1.29499	Smad4	ENSRNOT00000001883|Lhx5|ENSRNOG00000001392|LIM homeobox 5 [Source:RGD Symbol%3BAcc:71079]
rn6_v1_chr3_+_102683148_102683148	0.773681	Smad4	ENSRNOT00000046220|RGD1566059|ENSRNOG00000042991|similar to olfactory receptor Olfr1289 [Source:RGD Symbol%3BAcc:1566059]
rn6_v1_chr6_+_29012207_29012207	0.68046	Smad4	ENSRNOT00000079077|Atad2b|ENSRNOG00000058973|ATPase family%2C AAA domain containing 2B [Source:RGD Symbol%3BAcc:1566199]
rn6_v1_chr10_+_56453877_56453877	0.633119	Smad4	ENSRNOT00000031640|Plscr3|ENSRNOG00000027914|phospholipid scramblase 3 [Source:RGD Symbol%3BAcc:1307016]
rn6_v1_chr12_+_4546287_4546287	0.502165	Smad4	ENSRNOT00000001416|Higd2al1|ENSRNOG00000001071|HIG1 hypoxia inducible domain family%2C member 2A-like 1 [Source:RGD Symbol%3BAcc:1586494]
rn6_v1_chr15_+_32188736_32188736	0.388962	Smad4	ENSRNOT00000081436|AABR07017878.1|ENSRNOG00000061789|
rn6_v1_chr8_+_117280705_117280705	0.267167	Smad4	ENSRNOT00000085038|Usp19|ENSRNOG00000049531|ubiquitin specific peptidase 19 [Source:RGD Symbol%3BAcc:1303276]
rn6_v1_chr11_+_9642365_9642413	0.155814	Smad4	ENSRNOT00000087080|Robo1|ENSRNOG00000029614|roundabout guidance receptor 1 [Source:RGD Symbol%3BAcc:61941]	ENSRNOT00000042384|Robo1|ENSRNOG00000029614|roundabout guidance receptor 1 [Source:RGD Symbol%3BAcc:61941]
rn6_v1_chr3_+_172155496_172155496	0.0341564	Smad4	ENSRNOT00000066279|Stx16|ENSRNOG00000005281|syntaxin 16 [Source:RGD Symbol%3BAcc:1309423]
